BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041849
(293 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118482644|gb|ABK93241.1| unknown [Populus trichocarpa]
Length = 297
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/298 (72%), Positives = 249/298 (83%), Gaps = 8/298 (2%)
Query: 1 MDLLSVSSTSTSHLHFSLYKP---PNFSL---SKSLPLSFKPISSVKTRRISTKTLALQQ 54
MDLLS+SS++ + L FS KP P+ +L + P FKP++ + KT +L+
Sbjct: 1 MDLLSLSSSTATPL-FSSLKPTLSPHHNLKPPASPFPFLFKPLTPSSPKLSPLKT-SLKS 58
Query: 55 QQRQHDVPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
+P ++PQTPAT+MRGAE DAMGLLL+ERIVFLGNNIDDFVADAIISQLLLLDA
Sbjct: 59 SLTLTPIPQLASPQTPATSMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDA 118
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
QDPTKDIRLFVN PGGSLSA+MAIYDVVQLVRADVST+ALG+SASTAS+ILGGGTKGKRF
Sbjct: 119 QDPTKDIRLFVNCPGGSLSASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRF 178
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
AMPNTR+MIHQP+GGASGQ +DVEIQAREIMHNK+N RI+SGFT R+ EQVQKD+DRDR
Sbjct: 179 AMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKNNIIRIVSGFTSRTVEQVQKDMDRDR 238
Query: 235 YMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
YMSPIEAVEYGIIDGVIDRDSIIPL PVPE+V P +Y ++RKDP KFL PDVPDDEI
Sbjct: 239 YMSPIEAVEYGIIDGVIDRDSIIPLAPVPERVTPTLNYEDMRKDPMKFLNPDVPDDEI 296
>gi|255557703|ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223540927|gb|EEF42485.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 294
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/262 (79%), Positives = 227/262 (86%), Gaps = 5/262 (1%)
Query: 32 LSFK-PISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEADAMGLLLKERI 90
+FK PISS + + ++ Q P +APQTPATAMRGAE+DAMGLLL+ERI
Sbjct: 36 FNFKSPISSPHNKNFPSFSI----QSSGTLTPQFTAPQTPATAMRGAESDAMGLLLRERI 91
Query: 91 VFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVS 150
VFLGNNIDDFVADA ISQLLLLDAQDPTKDIRLF+N PGGSLSATMAIYDVVQLVRADVS
Sbjct: 92 VFLGNNIDDFVADATISQLLLLDAQDPTKDIRLFINCPGGSLSATMAIYDVVQLVRADVS 151
Query: 151 TVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDN 210
TVALG+SASTAS+ILGGGTKGKRFAMPNTR+M+HQP+GGASGQ +DVEIQAREIMHNK+N
Sbjct: 152 TVALGISASTASIILGGGTKGKRFAMPNTRIMVHQPLGGASGQAIDVEIQAREIMHNKNN 211
Query: 211 FTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGF 270
RIISGFTGR+ EQV KDIDRDRYMSPIEAVEYGIIDGVID DSIIPL PVPE+VKP
Sbjct: 212 VVRIISGFTGRTVEQVLKDIDRDRYMSPIEAVEYGIIDGVIDGDSIIPLAPVPERVKPTL 271
Query: 271 DYLEVRKDPRKFLTPDVPDDEI 292
Y E+RKDP KFLTPDVPDDEI
Sbjct: 272 SYEEMRKDPMKFLTPDVPDDEI 293
>gi|225446742|ref|XP_002282652.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic [Vitis vinifera]
Length = 291
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/232 (85%), Positives = 216/232 (93%)
Query: 61 VPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
+PL+ QTP RGAEADAMGLLLKERIVFLGNN+DDFVADAIISQLLLLDAQDPTKD
Sbjct: 59 LPLAHGSQTPGMGARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKD 118
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
IRLF+NSPGGSLSATMAIYD+VQLVRADVSTVALG+SASTAS+ILGGGTKGKRFAMPNTR
Sbjct: 119 IRLFINSPGGSLSATMAIYDIVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTR 178
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
+MIHQP+GGASGQ +DVEIQA+EIMHNK N T+II+GF+GRSFEQV+KDIDRDRYMSPIE
Sbjct: 179 IMIHQPLGGASGQAIDVEIQAQEIMHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIE 238
Query: 241 AVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
AVEYGIID VIDRDSIIPLVPVPEKVK +Y E+ KDPRKFLTPD+PDDEI
Sbjct: 239 AVEYGIIDAVIDRDSIIPLVPVPEKVKSRLNYEEISKDPRKFLTPDIPDDEI 290
>gi|356531505|ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like [Glycine max]
Length = 306
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 215/228 (94%)
Query: 65 SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 124
S+PQTP+TA RGAE D MGLLL+ERIVFLG++IDDFVADAI+SQ+LLLDAQDPTKDIRLF
Sbjct: 78 SSPQTPSTAARGAEGDVMGLLLRERIVFLGSSIDDFVADAIMSQMLLLDAQDPTKDIRLF 137
Query: 125 VNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIH 184
+NS GGSLSATMAIYD VQLVRADVSTVALG++ASTAS+ILGGGTKGKRFAMPNTR+MIH
Sbjct: 138 INSTGGSLSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMIH 197
Query: 185 QPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
QP+GGASGQ +DVEIQA+E+MHNK+N TRIIS FTGRSFEQVQKDIDRD+YMSPIEAVEY
Sbjct: 198 QPLGGASGQAIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEY 257
Query: 245 GIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
GIIDGVIDRDSIIPL+PVPE+VK +Y E+ KDPRKFLTPD+PDDEI
Sbjct: 258 GIIDGVIDRDSIIPLMPVPERVKSTLNYEEISKDPRKFLTPDIPDDEI 305
>gi|356496453|ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like [Glycine max]
Length = 306
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/308 (69%), Positives = 241/308 (78%), Gaps = 19/308 (6%)
Query: 1 MDLLSVS-------------STSTSHLHFSLYKP-PNFSLSKSLPLSFKPISSVKTRR-I 45
MDLLS+S S S + S + P P+ SK S P V T I
Sbjct: 1 MDLLSISPSHPLPSSIRTLSSNPKSPISSSFFTPKPHSRFSKP---SKTPARCVFTASPI 57
Query: 46 STKTLALQQQQRQHDVPLS-SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADA 104
+K Q R + SAPQTP+TA RGAE D MGLLL+ERIVFLG++IDDFVADA
Sbjct: 58 PSKIPNFGSQSRNPGLTFELSAPQTPSTAARGAEGDVMGLLLRERIVFLGSSIDDFVADA 117
Query: 105 IISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLI 164
I+SQLLLLDA DPTKDIRLF+NS GGSLSATMAIYD VQLVRADVSTVALG++ASTAS+I
Sbjct: 118 IMSQLLLLDALDPTKDIRLFINSTGGSLSATMAIYDAVQLVRADVSTVALGIAASTASVI 177
Query: 165 LGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFE 224
LGGGTKGKRFAMPNTR+M+HQP+GGASGQ +DVEIQA+E+MHNK+N TRIIS FTGRSFE
Sbjct: 178 LGGGTKGKRFAMPNTRIMVHQPLGGASGQAIDVEIQAKEVMHNKNNITRIISSFTGRSFE 237
Query: 225 QVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLT 284
QVQKDIDRD+YMSPIEAVEYGIIDGVIDRDSIIPL+PVPE+VK +Y E+ KDPRKFLT
Sbjct: 238 QVQKDIDRDKYMSPIEAVEYGIIDGVIDRDSIIPLMPVPERVKSTLNYEEISKDPRKFLT 297
Query: 285 PDVPDDEI 292
PD+PDDEI
Sbjct: 298 PDIPDDEI 305
>gi|388491004|gb|AFK33568.1| unknown [Lotus japonicus]
Length = 308
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/228 (82%), Positives = 216/228 (94%)
Query: 65 SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 124
S+PQTPATA+RGAE DAM LLL+ERIVFLG+ IDDFVADAI+SQLLLLDAQDP+KDI+LF
Sbjct: 80 SSPQTPATAIRGAETDAMWLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLF 139
Query: 125 VNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIH 184
+NSPGGSLSATMAIYD VQLVRADVST+ALG++ASTAS+ILGGGTKGKRFAMPNTR+MIH
Sbjct: 140 INSPGGSLSATMAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIH 199
Query: 185 QPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
QP+GGASGQ +DVEIQA+E+MHNK+N TRIISGFTGR+FEQVQKDIDRDRYMSPIEAVEY
Sbjct: 200 QPLGGASGQAIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEY 259
Query: 245 GIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
GIIDGVID++SIIPL PVPE+V+ +Y E+ KDPRKFLTP++PDDEI
Sbjct: 260 GIIDGVIDKESIIPLEPVPERVRSTLNYEEISKDPRKFLTPEIPDDEI 307
>gi|449456777|ref|XP_004146125.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like [Cucumis sativus]
Length = 293
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 235/299 (78%), Gaps = 14/299 (4%)
Query: 1 MDLLSVSSTSTSH-----LHFSLYKPPNFSLSKSLPLSFKPISSVKTRRISTKTLALQQQ 55
M+LLS ST T H L S KP NF LSF SSV KT AL+
Sbjct: 1 MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSV------LKTTALKPS 54
Query: 56 QRQHDVPLS--SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
R P S +APQTP A RGAE DAMGLLL+ERIVFLGN+IDDFVADAIISQLLLLD
Sbjct: 55 -RTLPPPCSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLD 113
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A+D TKDIRLF+NS GGSLS+TMAIYDVVQLVRADVST+ALG++ASTAS+ILGGGTKGKR
Sbjct: 114 AKDSTKDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKR 173
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
AMPN R+M+HQP+GGASG LDVEIQAREIM NKDN RIIS FTG FE+VQKDIDRD
Sbjct: 174 LAMPNARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRD 233
Query: 234 RYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
RYMSPIEAVEYG IDGVID+DSIIPL+PVP+KVK F+Y EV KDP KFLTPDVPDDEI
Sbjct: 234 RYMSPIEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEI 292
>gi|224074500|ref|XP_002304381.1| predicted protein [Populus trichocarpa]
gi|222841813|gb|EEE79360.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/219 (86%), Positives = 205/219 (93%)
Query: 74 MRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
MRGAE DAMGLLL+ERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN PGGSLS
Sbjct: 1 MRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNCPGGSLS 60
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A+MAIYDVVQLVRADVST+ALG+SASTAS+ILGGGTKGKRFAMPNTR+MIHQP+GGASGQ
Sbjct: 61 ASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQ 120
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+DVEIQAREIMHNK+N RI+SGFT R+ EQVQKD+DRDRYMSPIEAVEYGIIDGVIDR
Sbjct: 121 AIDVEIQAREIMHNKNNIIRIVSGFTSRTVEQVQKDMDRDRYMSPIEAVEYGIIDGVIDR 180
Query: 254 DSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DSIIPL PVPE+V P +Y ++RKDP KFL PDVPDDEI
Sbjct: 181 DSIIPLAPVPERVTPTLNYEDMRKDPMKFLNPDVPDDEI 219
>gi|302143493|emb|CBI22054.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/211 (88%), Positives = 202/211 (95%)
Query: 82 MGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDV 141
MGLLLKERIVFLGNN+DDFVADAIISQLLLLDAQDPTKDIRLF+NSPGGSLSATMAIYD+
Sbjct: 1 MGLLLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLSATMAIYDI 60
Query: 142 VQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQA 201
VQLVRADVSTVALG+SASTAS+ILGGGTKGKRFAMPNTR+MIHQP+GGASGQ +DVEIQA
Sbjct: 61 VQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQA 120
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVP 261
+EIMHNK N T+II+GF+GRSFEQV+KDIDRDRYMSPIEAVEYGIID VIDRDSIIPLVP
Sbjct: 121 QEIMHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIEAVEYGIIDAVIDRDSIIPLVP 180
Query: 262 VPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
VPEKVK +Y E+ KDPRKFLTPD+PDDEI
Sbjct: 181 VPEKVKSRLNYEEISKDPRKFLTPDIPDDEI 211
>gi|21593305|gb|AAM65254.1| ATP-dependent Clp protease proteolytic subunit (ClpP4) [Arabidopsis
thaliana]
Length = 292
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/225 (80%), Positives = 208/225 (92%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NS
Sbjct: 67 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 126
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGSLSATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKGKRFAMPNTR+MIHQP+
Sbjct: 127 PGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPL 186
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGASGQV+DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSPIEAVEYG+I
Sbjct: 187 GGASGQVIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLI 246
Query: 248 DGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DGVID DSIIPL PVP++VKP +Y E+ KDP KFLTP++PDDEI
Sbjct: 247 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPIKFLTPEIPDDEI 291
>gi|18422548|ref|NP_568644.1| ATP-dependent Clp protease proteolytic subunit 4 [Arabidopsis
thaliana]
gi|297794727|ref|XP_002865248.1| hypothetical protein ARALYDRAFT_494440 [Arabidopsis lyrata subsp.
lyrata]
gi|75306344|sp|Q94B60.1|CLPP4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic; AltName: Full=Endopeptidase ClpP4;
Short=nClpP4; AltName: Full=nClpP3; Flags: Precursor
gi|14596089|gb|AAK68772.1| ATP-dependent Clp protease-like protein [Arabidopsis thaliana]
gi|30023792|gb|AAP13429.1| At5g45390 [Arabidopsis thaliana]
gi|297311083|gb|EFH41507.1| hypothetical protein ARALYDRAFT_494440 [Arabidopsis lyrata subsp.
lyrata]
gi|332007860|gb|AED95243.1| ATP-dependent Clp protease proteolytic subunit 4 [Arabidopsis
thaliana]
Length = 292
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/225 (79%), Positives = 207/225 (92%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NS
Sbjct: 67 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 126
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGSLSATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKGKRFAMPNTR+MIHQP+
Sbjct: 127 PGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPL 186
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGASGQ +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSPIEAVEYG+I
Sbjct: 187 GGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLI 246
Query: 248 DGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DGVID DSIIPL PVP++VKP +Y E+ KDP KFLTP++PDDEI
Sbjct: 247 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEI 291
>gi|5360593|dbj|BAA82068.1| nClpP4 [Arabidopsis thaliana]
Length = 299
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/225 (79%), Positives = 207/225 (92%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NS
Sbjct: 74 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 133
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGSLSATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKGKRFAMPNTR+MIHQP+
Sbjct: 134 PGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPL 193
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGASGQ +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSPIEAVEYG+I
Sbjct: 194 GGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLI 253
Query: 248 DGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DGVID DSIIPL PVP++VKP +Y E+ KDP KFLTP++PDDEI
Sbjct: 254 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEI 298
>gi|4454056|emb|CAA04393.1| ClpP [Arabidopsis thaliana]
Length = 228
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/225 (79%), Positives = 206/225 (91%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NS
Sbjct: 3 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 62
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGSLSATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKG RFAMPNTR+MIHQP+
Sbjct: 63 PGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGNRFAMPNTRIMIHQPL 122
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGASGQ +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSPIEAVEYG+I
Sbjct: 123 GGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLI 182
Query: 248 DGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DGVID DSIIPL PVP++VKP +Y E+ KDP KFLTP++PDDEI
Sbjct: 183 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEI 227
>gi|297846120|ref|XP_002890941.1| hypothetical protein ARALYDRAFT_890716 [Arabidopsis lyrata subsp.
lyrata]
gi|297336783|gb|EFH67200.1| hypothetical protein ARALYDRAFT_890716 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/225 (78%), Positives = 205/225 (91%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NS
Sbjct: 3 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 62
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGSLSATMAIYDVVQLVRADVST+ALG+ ASTAS+ILG GTKGKRFAMPNTR+MIHQP+
Sbjct: 63 PGGSLSATMAIYDVVQLVRADVSTIALGIVASTASIILGAGTKGKRFAMPNTRIMIHQPL 122
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGAS Q +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDR+RYMSPIEAVEYG+I
Sbjct: 123 GGASDQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRNRYMSPIEAVEYGLI 182
Query: 248 DGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DGVID DSIIPL PVP++VKP +Y E+ KDP KFLTP++PDDEI
Sbjct: 183 DGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEI 227
>gi|9758729|dbj|BAB09167.1| ATP-dependent Clp protease-like protein [Arabidopsis thaliana]
Length = 301
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/234 (76%), Positives = 207/234 (88%), Gaps = 9/234 (3%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NS
Sbjct: 67 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINS 126
Query: 128 PGGSL---------SATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPN 178
PGGSL SATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKGKRFAMPN
Sbjct: 127 PGGSLRLNVVIVWFSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPN 186
Query: 179 TRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSP 238
TR+MIHQP+GGASGQ +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSP
Sbjct: 187 TRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSP 246
Query: 239 IEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
IEAVEYG+IDGVID DSIIPL PVP++VKP +Y E+ KDP KFLTP++PDDEI
Sbjct: 247 IEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEI 300
>gi|357484629|ref|XP_003612602.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355513937|gb|AES95560.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|388495738|gb|AFK35935.1| unknown [Medicago truncatula]
Length = 297
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/300 (64%), Positives = 228/300 (76%), Gaps = 12/300 (4%)
Query: 1 MDLLSVSSTSTSHLHFSLYKP--PNFSLSKSLPLSFK-----PISSVKTRRISTKTLALQ 53
MD L+ S + + + KP +F+ PL F PI+ V T +K
Sbjct: 1 MDFLTTSPSLSRRIPTLFSKPTISSFNSKPHFPLQFSQFRTTPINCVLTTPSPSKNPNFN 60
Query: 54 QQQRQHDVPLS-SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
Q ++ + S+PQTP A+RGAE+D MGLLL+ERIVFLG+ IDDFVADAI+SQLLLL
Sbjct: 61 PQLQKPSITFQLSSPQTPERAIRGAESDTMGLLLRERIVFLGSEIDDFVADAIMSQLLLL 120
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
DAQDPTKDI+LF+NSPGGSLSATMAIYD VQLVRADVST+A+G+SASTAS+ILGGGTKGK
Sbjct: 121 DAQDPTKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTIAMGISASTASIILGGGTKGK 180
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
R AMPNTR+MI QP GGASGQ +DVEIQA+EIMHNK+N +RIIS FTGRS EQV KDIDR
Sbjct: 181 RLAMPNTRIMIAQPPGGASGQAIDVEIQAKEIMHNKNNVSRIISSFTGRSLEQVLKDIDR 240
Query: 233 DRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DRY+SPIEAVEYGIIDGVIDR+ IIPL+PVPEKV+ ++ D FL P +PDDEI
Sbjct: 241 DRYLSPIEAVEYGIIDGVIDREMIIPLLPVPEKVEEA----TLKIDDADFLNPHIPDDEI 296
>gi|226494171|ref|NP_001140458.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194699596|gb|ACF83882.1| unknown [Zea mays]
gi|195624444|gb|ACG34052.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
gi|414867979|tpg|DAA46536.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 289
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 209/267 (78%), Gaps = 14/267 (5%)
Query: 40 VKTRRISTKTLALQQQQRQHDVPLSS-------APQTP-------ATAMRGAEADAMGLL 85
++ RR + A QR L S APQ P A D MGLL
Sbjct: 22 LRVRRPCARACAWAPSQRPQQGALVSLKPCASLAPQAPLWRAESDAAGGGAGAGDVMGLL 81
Query: 86 LKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLV 145
L+ERIVFLGN I+DF+ADA++SQLLLLDA DP DIRLFVNSPGGSLSATMAIYDV+QLV
Sbjct: 82 LRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIYDVMQLV 141
Query: 146 RADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIM 205
RADVST+ +G++ STAS+ILGGGTKGKRFAMPNTR+MIHQP+GGASGQ LDVE+QA+EI+
Sbjct: 142 RADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDVEVQAKEIL 201
Query: 206 HNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEK 265
NK N RI+SGFTGR+ EQV+KDIDRDRYM P+EAV+YG+IDGVID DSIIPL PVPE+
Sbjct: 202 TNKRNVIRIVSGFTGRTPEQVEKDIDRDRYMGPLEAVDYGLIDGVIDGDSIIPLEPVPER 261
Query: 266 VKPGFDYLEVRKDPRKFLTPDVPDDEI 292
VKP ++Y E+ KDP+KFLTPDVPDDEI
Sbjct: 262 VKPKYNYEELYKDPQKFLTPDVPDDEI 288
>gi|242040043|ref|XP_002467416.1| hypothetical protein SORBIDRAFT_01g027680 [Sorghum bicolor]
gi|241921270|gb|EER94414.1| hypothetical protein SORBIDRAFT_01g027680 [Sorghum bicolor]
Length = 289
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 179/267 (67%), Positives = 211/267 (79%), Gaps = 14/267 (5%)
Query: 40 VKTRRISTKTLALQQQQR-QHDVPLSSAPQT---PATAMRGAEAD----------AMGLL 85
++ RR + A QR Q LS P P + AE+D MGLL
Sbjct: 22 LRVRRPCARARAWAPSQRPQQGALLSLKPCASLAPHAPLWRAESDAAGGGAGAGDVMGLL 81
Query: 86 LKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLV 145
L+ERIVFLGN I+DF+ADA++SQLLLLDA DP DIRLFVNSPGGSLSATMAIYDV+QLV
Sbjct: 82 LRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIYDVMQLV 141
Query: 146 RADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIM 205
RADVST+ +G++ STAS+ILGGGTKGKRFAMPNTR+MIHQP+GGASGQ LDVE+QA+EI+
Sbjct: 142 RADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDVEVQAKEIL 201
Query: 206 HNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEK 265
NK N RI+SGFTGR+ EQV+KDIDRDRYM P+EAV+YG+IDGVID DSIIPL PVPE+
Sbjct: 202 TNKRNVIRIVSGFTGRTLEQVEKDIDRDRYMGPLEAVDYGLIDGVIDGDSIIPLEPVPER 261
Query: 266 VKPGFDYLEVRKDPRKFLTPDVPDDEI 292
VKP ++Y E+ KDP+KFLTPDVPDDEI
Sbjct: 262 VKPKYNYEELYKDPQKFLTPDVPDDEI 288
>gi|115483692|ref|NP_001065516.1| Os10g0580800 [Oryza sativa Japonica Group]
gi|12039365|gb|AAG46151.1|AC018727_3 putative Clp protease [Oryza sativa Japonica Group]
gi|31433719|gb|AAP55198.1| ATP-dependent Clp protease proteolytic subunit 3, putative,
expressed [Oryza sativa Japonica Group]
gi|113640048|dbj|BAF27353.1| Os10g0580800 [Oryza sativa Japonica Group]
gi|215737516|dbj|BAG96646.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737683|dbj|BAG96813.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737745|dbj|BAG96875.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740822|dbj|BAG96978.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222613342|gb|EEE51474.1| hypothetical protein OsJ_32613 [Oryza sativa Japonica Group]
Length = 293
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/240 (72%), Positives = 203/240 (84%), Gaps = 11/240 (4%)
Query: 64 SSAPQTP--ATAMR---------GAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
+SAP TP +R GA D MGLLL+ERIVFLGN I+DF+ADA++SQLLLL
Sbjct: 53 ASAPSTPLWEAGVRAESSDSPGAGAGGDVMGLLLRERIVFLGNEIEDFLADAVVSQLLLL 112
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
DA DP DIRLFVNSPGGSLSATMAIYDV+QLVRADVST+ LG++ STAS+ILGGGTKGK
Sbjct: 113 DAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAGSTASIILGGGTKGK 172
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
RFAMPNTR+MIHQP+GGASGQ LDVE+QA+EI+ NK N R+ISGFTGR+ EQV+KDIDR
Sbjct: 173 RFAMPNTRIMIHQPVGGASGQALDVEVQAKEILTNKRNVIRLISGFTGRTPEQVEKDIDR 232
Query: 233 DRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DRYM P+EAV+YG+ID VID DSIIPL PVPE+VKP ++Y E+ KDP+KFLTPDVPDDEI
Sbjct: 233 DRYMGPLEAVDYGLIDSVIDGDSIIPLEPVPERVKPKYNYEELYKDPQKFLTPDVPDDEI 292
>gi|357145775|ref|XP_003573761.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like isoform 1 [Brachypodium distachyon]
gi|357145778|ref|XP_003573762.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like isoform 2 [Brachypodium distachyon]
Length = 294
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 193/217 (88%)
Query: 76 GAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSAT 135
GA D MGLLL+ERI+FLGN I+DF+ADA++SQLLLLDA D DIRLFVNSPGGSLSAT
Sbjct: 77 GASGDVMGLLLRERIIFLGNEIEDFLADAVVSQLLLLDAMDSESDIRLFVNSPGGSLSAT 136
Query: 136 MAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVL 195
MAIYDV+QL+RADVST+ +G++ STAS+ILGGGTKGKRFAMPNTR+M+HQP+GGASGQ L
Sbjct: 137 MAIYDVMQLIRADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMMHQPVGGASGQAL 196
Query: 196 DVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
DVE+QA+EI+ +K N R+ISGFTGR+ EQV+KDIDRDRYM P EAV+YG+IDGVID D
Sbjct: 197 DVEVQAKEILTSKRNVIRLISGFTGRTLEQVEKDIDRDRYMGPHEAVDYGLIDGVIDGDR 256
Query: 256 IIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
IIPL PVPE+VKP ++Y E+ KDP+KFLTPDVPDDEI
Sbjct: 257 IIPLEPVPERVKPKYNYEELYKDPQKFLTPDVPDDEI 293
>gi|326509601|dbj|BAJ87016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 193/216 (89%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A D MGLLL+ERI+FLGN I+DF+ADA++SQLLLLDA D DIRLFVNSPGGSLSATM
Sbjct: 80 ASGDVMGLLLRERIIFLGNEIEDFLADAVVSQLLLLDAMDSESDIRLFVNSPGGSLSATM 139
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
AIYDV+QLVRADVST+ +G++ STAS++LGGG KGKRFAMPNTR+M+HQP+GGASGQ LD
Sbjct: 140 AIYDVMQLVRADVSTIGMGIAGSTASILLGGGAKGKRFAMPNTRIMMHQPVGGASGQALD 199
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
VE+QA+EI+ +K N R+ISGFTGR+ EQV+KDIDRDRYM P+EAV+YGIIDGVID DSI
Sbjct: 200 VEVQAKEILASKRNVIRLISGFTGRTLEQVEKDIDRDRYMGPLEAVDYGIIDGVIDEDSI 259
Query: 257 IPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
IPL PVPE+VKP ++Y E+ KDP+KFLTPDVPDDEI
Sbjct: 260 IPLEPVPERVKPKYNYEEMYKDPQKFLTPDVPDDEI 295
>gi|116786219|gb|ABK24027.1| unknown [Picea sitchensis]
Length = 317
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 158/228 (69%), Positives = 192/228 (84%)
Query: 66 APQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
A QTPA+A R A+ D MGLLL++RIVFLG+N+DDFVADAIISQLLLLDAQ+P KDIRLF+
Sbjct: 90 AQQTPASAQRSADGDVMGLLLRQRIVFLGSNMDDFVADAIISQLLLLDAQNPNKDIRLFI 149
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
N PGGS++A M I+D +QL RADVST+A G++ASTAS++L GG+KGKR AMPNTR+M+HQ
Sbjct: 150 NCPGGSINAAMGIFDTIQLCRADVSTIAFGLAASTASIVLAGGSKGKRLAMPNTRIMMHQ 209
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGASG +DVEIQA+EIM++K N TRIIS TGRS EQV D+DRDRYMSP+EAVEYG
Sbjct: 210 PLGGASGSAIDVEIQAKEIMYHKSNVTRIISERTGRSTEQVDNDMDRDRYMSPMEAVEYG 269
Query: 246 IIDGVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEIV 293
+IDGVID++SIIPL +PE VKP + E KD KF+TP +PDDEI
Sbjct: 270 LIDGVIDKESIIPLPILPETVKPTLSFAEASKDFDKFITPHIPDDEIC 317
>gi|168064316|ref|XP_001784109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664360|gb|EDQ51083.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 155/228 (67%), Positives = 193/228 (84%), Gaps = 3/228 (1%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT + MR AEAD MGL+LK+RIVFLG+ +DDFVADAI+SQLLLLDA DP K+IRLFVN
Sbjct: 2 QTASPGMRSAEADVMGLMLKQRIVFLGHQMDDFVADAIVSQLLLLDAVDPNKEIRLFVNC 61
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGS+SA MAI+D +QL RADVST+ G++ASTA+++L GGT GKR AMPN+R+M+HQP+
Sbjct: 62 PGGSISAAMAIFDAIQLCRADVSTICFGLAASTAAIVLAGGTPGKRLAMPNSRIMMHQPL 121
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGASGQ +DVEIQA+E+M++K N TRI+S TGR+ EQV+KDIDRDRYMSPIEA+EYGII
Sbjct: 122 GGASGQAIDVEIQAKEVMYHKSNVTRILSEITGRAPEQVEKDIDRDRYMSPIEAMEYGII 181
Query: 248 DGVIDRDSIIP---LVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
DGVID+D+II L+ V ++VKP + L +DPRKFLTP++PDDEI
Sbjct: 182 DGVIDKDAIISINGLLEVSDRVKPRKENLAALEDPRKFLTPEIPDDEI 229
>gi|302800375|ref|XP_002981945.1| hypothetical protein SELMODRAFT_233821 [Selaginella moellendorffii]
gi|302802337|ref|XP_002982924.1| hypothetical protein SELMODRAFT_234106 [Selaginella moellendorffii]
gi|300149514|gb|EFJ16169.1| hypothetical protein SELMODRAFT_234106 [Selaginella moellendorffii]
gi|300150387|gb|EFJ17038.1| hypothetical protein SELMODRAFT_233821 [Selaginella moellendorffii]
Length = 213
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 180/212 (84%), Gaps = 1/212 (0%)
Query: 82 MGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDV 141
MGLLL++R VFLG+ +DDFVADAIISQLLLLDA D K+IR+F+N PGGS+SA M IYD
Sbjct: 1 MGLLLRQRTVFLGHQLDDFVADAIISQLLLLDAMDSKKEIRMFINCPGGSVSAAMGIYDA 60
Query: 142 VQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQA 201
+QL RA+VST+A G++ASTAS+IL GGTKGKRFAMPNTR+M+HQPMGGASGQ +DVEIQA
Sbjct: 61 IQLCRAEVSTIAFGLAASTASVILAGGTKGKRFAMPNTRIMVHQPMGGASGQAIDVEIQA 120
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVP 261
+EIM +K+NFTRI++ TG+ FEQV+KDIDRDRYMS +EA+EYG+IDGVID+++IIP+
Sbjct: 121 KEIMFHKNNFTRILAEITGKPFEQVEKDIDRDRYMSAVEAMEYGLIDGVIDQENIIPVPA 180
Query: 262 VPE-KVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
+PE K++ D + DP KFL P +PDDEI
Sbjct: 181 MPEKKIERRRDIKDAEADPMKFLKPQIPDDEI 212
>gi|167999544|ref|XP_001752477.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696377|gb|EDQ82716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/230 (66%), Positives = 187/230 (81%), Gaps = 3/230 (1%)
Query: 66 APQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
A Q AM+ AE D MGL+LK+RIVFLGN +DDFVAD+IISQLLLLDA DP +DIRLF+
Sbjct: 2 ASQAAPQAMQSAEGDVMGLMLKQRIVFLGNQMDDFVADSIISQLLLLDAIDPKQDIRLFI 61
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
N PGGS+SA M I+D +QL + D+ST+ G +ASTA+L+L GTKGKR AMPN+R+M+HQ
Sbjct: 62 NCPGGSISAAMGIFDAMQLCKCDISTICFGFAASTAALLLAAGTKGKRLAMPNSRIMMHQ 121
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
PMGGASGQ +DVEIQA+E+M++K N RI+S TGRS EQV+KDIDRDRYMSPIEA+EYG
Sbjct: 122 PMGGASGQAIDVEIQAKEVMYHKSNVIRILSEITGRSIEQVEKDIDRDRYMSPIEAMEYG 181
Query: 246 IIDGVIDRDSIIP---LVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
+IDGVID+D+ I L VPE+VKP + L +DPRKFLTP++PDDEI
Sbjct: 182 MIDGVIDKDATIAINELPQVPERVKPRQENLAALEDPRKFLTPEIPDDEI 231
>gi|449523632|ref|XP_004168827.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like, partial [Cucumis sativus]
Length = 167
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/164 (80%), Positives = 146/164 (89%)
Query: 129 GGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMG 188
G +S+TMAIYDVVQLVRADVST+ALG++ASTAS+ILGGGTKGKR AMPN R+M+HQP+G
Sbjct: 3 GVFVSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLG 62
Query: 189 GASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIID 248
GASG LDVEIQAREIM NKDN RIIS FTG FE+VQKDIDRDRYMSPIEAVEYG ID
Sbjct: 63 GASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFID 122
Query: 249 GVIDRDSIIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDEI 292
GVID+DSIIPL+PVP+KVK F+Y EV KDP KFLTPDVPDDEI
Sbjct: 123 GVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEI 166
>gi|302832604|ref|XP_002947866.1| hypothetical protein VOLCADRAFT_103638 [Volvox carteri f.
nagariensis]
gi|300266668|gb|EFJ50854.1| hypothetical protein VOLCADRAFT_103638 [Volvox carteri f.
nagariensis]
Length = 347
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 154/206 (74%), Gaps = 2/206 (0%)
Query: 54 QQQRQHDVPLSSAPQTPATAMRGAE--ADAMGLLLKERIVFLGNNIDDFVADAIISQLLL 111
QQ + D P A P A R AE D GLLL++RIVFLG ++DF ADA+ISQLLL
Sbjct: 42 QQPKGWDRPWIQANSQPIVAPRTAEMQGDPFGLLLRQRIVFLGGEVEDFGADALISQLLL 101
Query: 112 LDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKG 171
LD+QDPTKDI++F+NSPGGS++A M IYD + L RADV T G++AS + +LG G +G
Sbjct: 102 LDSQDPTKDIKMFINSPGGSVTAGMGIYDAMMLCRADVHTYCFGLAASMGAFLLGAGKRG 161
Query: 172 KRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDID 231
KR +MPN+R+MIHQP+GGASGQ +D+EIQA+EIM++K N RI++ +TG+ ++++D D
Sbjct: 162 KRHSMPNSRIMIHQPLGGASGQAVDIEIQAKEIMYHKANLNRIMADYTGQPLAKIEEDTD 221
Query: 232 RDRYMSPIEAVEYGIIDGVIDRDSII 257
RDRYMSP+EA EYGIID ++ + +
Sbjct: 222 RDRYMSPLEAKEYGIIDHIVGGEEAV 247
>gi|255070963|ref|XP_002507563.1| endopeptidase clp chloroplast precursor [Micromonas sp. RCC299]
gi|226522838|gb|ACO68821.1| endopeptidase clp chloroplast precursor [Micromonas sp. RCC299]
Length = 270
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 155/212 (73%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVA 102
+R + T + +R+ V +S R AD GLLL+ERIVFLGN +DDF A
Sbjct: 28 KRFDSVTFHDRTSERRLSVAMSRPHAGGPVVPRQDAADPFGLLLRERIVFLGNQVDDFTA 87
Query: 103 DAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTAS 162
DA+ISQLLLLDAQDP KDI+LF+NSPGGS++A M IYD +Q+ RADVSTV +G++AS +
Sbjct: 88 DAVISQLLLLDAQDPKKDIKLFINSPGGSVTAGMGIYDAMQMCRADVSTVCMGLAASMGA 147
Query: 163 LILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRS 222
+L G +GKR +MPN R+MIHQP+GGASGQ +D+EIQA+EIM++K N R+++ TG+
Sbjct: 148 FLLTSGARGKRLSMPNARIMIHQPLGGASGQAVDIEIQAKEIMYHKANLNRLMAFHTGQD 207
Query: 223 FEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+Q+ +D DRDRYMSP+EA YGIID +I D
Sbjct: 208 VKQIDEDTDRDRYMSPLEAKNYGIIDEIIGGD 239
>gi|307109118|gb|EFN57356.1| hypothetical protein CHLNCDRAFT_142728 [Chlorella variabilis]
Length = 267
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 148/191 (77%), Gaps = 3/191 (1%)
Query: 79 ADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAI 138
D GLLL++RIVF G ++DF ADAIISQLLLLDAQDPTKDI++F+NSPGGS++A M I
Sbjct: 74 GDPFGLLLRQRIVFFGGEVNDFSADAIISQLLLLDAQDPTKDIKMFINSPGGSVTAGMGI 133
Query: 139 YDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVE 198
YD + + RADV T G++AS + +LG GT+GKR++MPN R+MIHQP+GGASG +D+E
Sbjct: 134 YDAMMMCRADVQTYCFGLAASMGAFLLGAGTRGKRYSMPNARIMIHQPLGGASGAAVDIE 193
Query: 199 IQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII- 257
IQA+EIM++K N RI+S +TG+ E++++D DRDRYMSP+EA YG+ID ++ D +
Sbjct: 194 IQAKEIMYHKANLNRIMSQYTGQPIEKIEEDTDRDRYMSPLEAKNYGLIDSLVGGDEAVF 253
Query: 258 --PLVPVPEKV 266
PL P EKV
Sbjct: 254 VKPLEPHTEKV 264
>gi|303274444|ref|XP_003056542.1| endopeptidase clp chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226462626|gb|EEH59918.1| endopeptidase clp chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 283
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 167/246 (67%), Gaps = 17/246 (6%)
Query: 26 LSKSLPLSFKPI----SSVKTRRISTKTLALQQQQRQH-----DVPLSSAPQTPATAMRG 76
LS+ +P S+ P S +K+ S T A ++ H + +S PA ++R
Sbjct: 6 LSQRVPFSWNPAGTRQSRLKSELASNSTRAKFSFRKVHSSFIPEAGISGGDLHPAYSVRA 65
Query: 77 A--------EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSP 128
D GLLL++RIVFLGN +DDF ADA+ISQLLLLDAQDP KDI+LF+NSP
Sbjct: 66 GGLVVPRQEAGDPFGLLLRQRIVFLGNQVDDFTADAVISQLLLLDAQDPKKDIKLFINSP 125
Query: 129 GGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMG 188
GGS++A M IYD +Q+ RADVSTV +G++AS + +L G++GKR +MPN R+MIHQP+G
Sbjct: 126 GGSVTAGMGIYDAMQMCRADVSTVCMGLAASMGAFLLTAGSRGKRLSMPNARIMIHQPLG 185
Query: 189 GASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIID 248
GASGQ +D+EIQA+EIM +K N R+++ T + +Q+ +D DRDRYMSP+EA YGIID
Sbjct: 186 GASGQAVDIEIQAQEIMFHKANLNRLMAFHTDQDVKQIDEDTDRDRYMSPLEAKNYGIID 245
Query: 249 GVIDRD 254
+I D
Sbjct: 246 EIIGGD 251
>gi|159465135|ref|XP_001690778.1| active subunit of chloroplast ClpP peptidase [Chlamydomonas
reinhardtii]
gi|158279464|gb|EDP05224.1| active subunit of chloroplast ClpP peptidase [Chlamydomonas
reinhardtii]
Length = 345
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 153/214 (71%), Gaps = 4/214 (1%)
Query: 42 TRRISTKTLALQQQQR--QHDVPLSSAPQTPATAMRGAE--ADAMGLLLKERIVFLGNNI 97
RR L QR D P A P A R AE D GLLL++RIVFLG +
Sbjct: 23 ARRACVPKAQLHDSQRPKGWDRPWIQANSQPIVAPRTAEMQGDPFGLLLRQRIVFLGGEV 82
Query: 98 DDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMS 157
+DF ADAIISQLLLLD+QDPTKDI++F+NSPGGS++A M IYD + L RADV+T G++
Sbjct: 83 EDFGADAIISQLLLLDSQDPTKDIKIFINSPGGSVTAGMGIYDAMMLCRADVNTYCFGLA 142
Query: 158 ASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISG 217
AS + +LG G +GKR +MPN+R+MIHQP+GGASGQ +D+EIQA+EIM++K N RI++
Sbjct: 143 ASMGAFLLGAGKRGKRNSMPNSRIMIHQPLGGASGQAVDIEIQAKEIMYHKANLNRIMAD 202
Query: 218 FTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ + ++++D DRDRYMSP+EA EYG+ID +I
Sbjct: 203 YCQQPLSKIEEDTDRDRYMSPLEAKEYGLIDHII 236
>gi|384247043|gb|EIE20531.1| hypothetical protein COCSUDRAFT_25295 [Coccomyxa subellipsoidea
C-169]
Length = 234
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 141/176 (80%)
Query: 79 ADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAI 138
D GLL+++RIVFLG ++DF ADAIISQLLLLD+QD TKDI+LF+NSPGGS++A M I
Sbjct: 10 GDPFGLLMRQRIVFLGGEVNDFAADAIISQLLLLDSQDATKDIKLFINSPGGSVTAGMGI 69
Query: 139 YDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVE 198
YD +QL RAD+ T G++AS + +LG G KGKR++MPN R+MIHQP+GGASGQ +D+E
Sbjct: 70 YDAMQLCRADIQTYCFGLAASMGAFLLGAGAKGKRYSMPNARIMIHQPLGGASGQAVDIE 129
Query: 199 IQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
IQA+EIM++K N RI+S TG+ +++ +D DRDRYMSP+EA EYG+ID VI D
Sbjct: 130 IQAKEIMYHKANLNRIMSECTGQPIDKIDEDTDRDRYMSPLEAKEYGLIDHVIGGD 185
>gi|308803947|ref|XP_003079286.1| COG0740: Protease subunit of ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
gi|116057741|emb|CAL53944.1| COG0740: Protease subunit of ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
Length = 306
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 146/200 (73%), Gaps = 2/200 (1%)
Query: 76 GAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSAT 135
GA D G LLK RIVFLG+ +DDF ADA+ISQLLLLD QDPTK+I+LF+NSPGGS++A
Sbjct: 81 GAGGDPFGALLKNRIVFLGHQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAG 140
Query: 136 MAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVL 195
M IYD +Q RA VSTV LG++AS + +L G KG+R +MPN R+MIHQP+GGA G +
Sbjct: 141 MGIYDAMQFCRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLGGAQGSAV 200
Query: 196 DVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
D+EIQA+EIM++K N R+++ TG+ E + +D DRDRYMSP+EA +YG+ID VI D
Sbjct: 201 DIEIQAKEIMYHKANLNRLMAFHTGQKVETIDEDTDRDRYMSPLEAKQYGVIDIVIGGDD 260
Query: 256 IIPLVP--VPEKVKPGFDYL 273
+ EK+K DY+
Sbjct: 261 AGLKIEGSFTEKLKTKKDYV 280
>gi|302753844|ref|XP_002960346.1| hypothetical protein SELMODRAFT_71251 [Selaginella moellendorffii]
gi|302767898|ref|XP_002967369.1| hypothetical protein SELMODRAFT_71370 [Selaginella moellendorffii]
gi|300165360|gb|EFJ31968.1| hypothetical protein SELMODRAFT_71370 [Selaginella moellendorffii]
gi|300171285|gb|EFJ37885.1| hypothetical protein SELMODRAFT_71251 [Selaginella moellendorffii]
Length = 214
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 142/186 (76%)
Query: 83 GLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVV 142
G+LL++RIVFLG+ +DD AD IISQLLLLDA+DPTKDI++F+NSPGGS+SA M IYD +
Sbjct: 5 GVLLQQRIVFLGSQVDDVSADLIISQLLLLDAKDPTKDIKMFINSPGGSVSAGMGIYDAM 64
Query: 143 QLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAR 202
+L RADVST+ G++AS + +L GTKGKR+ MPN RVMIHQP+GGA G +DV IQ R
Sbjct: 65 KLCRADVSTICFGLAASMGAFLLASGTKGKRYCMPNARVMIHQPLGGAGGVAIDVGIQVR 124
Query: 203 EIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPV 262
E+M++K +I+S TG+S EQ++ D DRD +M+ EAV+YG++DGVID + P+
Sbjct: 125 EMMYHKAKLNKILSRLTGKSEEQIEADTDRDYFMNAWEAVDYGLVDGVIDDGKPGLVAPI 184
Query: 263 PEKVKP 268
E +P
Sbjct: 185 GEAKEP 190
>gi|356569022|ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Glycine max]
Length = 322
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/228 (50%), Positives = 156/228 (68%), Gaps = 17/228 (7%)
Query: 36 PISSVKTRRISTKTLALQQQQRQ----------HDVPLSSA-PQTPATAMRGAEADAMGL 84
P +S KTRR TK L++ RQ HD S+A P P R E DA +
Sbjct: 31 PTASTKTRR--TKPLSIVNASRQTLSSNWLVSPHDFSASTASPWLP----RFEELDATNM 84
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FLG+ +DD AD IISQLL LDA+D KDI+LF+NSPGGS++A M IYD ++L
Sbjct: 85 LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKL 144
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+ADVSTV LG++AS + IL GTKGKR+ MPN+RVMIHQP+G A G+ ++ I+ RE+
Sbjct: 145 CKADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREM 204
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++K +I+S TG+ EQ++ D DRD +M+P EA EYG++DGVID
Sbjct: 205 AYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVID 252
>gi|255638490|gb|ACU19554.1| unknown [Glycine max]
Length = 322
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 155/228 (67%), Gaps = 17/228 (7%)
Query: 36 PISSVKTRRISTKTLALQQQQRQ----------HDVPLSSA-PQTPATAMRGAEADAMGL 84
P +S KTRR TK L++ RQ HD S+A P P R E DA +
Sbjct: 31 PTASTKTRR--TKPLSIVNASRQTLSSNWLVSPHDFSASTASPWLP----RFEELDATNM 84
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FLG+ +DD AD IISQLL LDA+D KDI+LF+N PGGS++A M IYD ++L
Sbjct: 85 LLRQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINPPGGSVTAGMGIYDAMKL 144
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+ADVSTV LG++AS + IL GTKGKR+ MPN+RVMIHQP+G A G+ ++ I+ RE+
Sbjct: 145 CKADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREM 204
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++K +I+S TG+ EQ++ D DRD +M+P EA EYG++DGVID
Sbjct: 205 AYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVID 252
>gi|255644732|gb|ACU22868.1| unknown [Glycine max]
Length = 270
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 155/226 (68%), Gaps = 17/226 (7%)
Query: 38 SSVKTRRISTKTLALQQQQRQ----------HDVPLSSA-PQTPATAMRGAEADAMGLLL 86
+S KTRR TK L++ RQ HD S+A P P R E DA +LL
Sbjct: 33 ASTKTRR--TKPLSVVNASRQTLSSNWLVSPHDFSASTASPWLP----RFEELDATNMLL 86
Query: 87 KERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVR 146
++RI+FLG+ +DD AD IISQLL LDA+D KDI+LF+NSPGGS++A M IYD ++L +
Sbjct: 87 RQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCK 146
Query: 147 ADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMH 206
ADVSTV LG++AS + IL GTKGKR+ MPN+RVMIHQP+G A G+ ++ I+ RE+ +
Sbjct: 147 ADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAY 206
Query: 207 NKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+K +I+S TG+ EQ++ D DRD +M+P EA EYG++DGVID
Sbjct: 207 HKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVID 252
>gi|145347023|ref|XP_001417979.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144578207|gb|ABO96272.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ RIVFLG+ +DDF ADA+ISQLLLLD QDPTK+I+LF+NSPGGS++A M IYD +Q
Sbjct: 104 LLRNRIVFLGSQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAGMGIYDAMQF 163
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
RA VSTV LG++AS + +L G KG+R +MPN R+MIHQP+GGA G +D+EIQA+EI
Sbjct: 164 CRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLGGAQGSAVDIEIQAKEI 223
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVP--V 262
MH+K N R+++ TG+ + + +D DRDRYMSP+EA +YG+ID VI D +
Sbjct: 224 MHHKANLNRLMAFHTGQDVKTIDEDTDRDRYMSPLEAKQYGVIDIVIGGDDAGLKIEGSF 283
Query: 263 PEKVKPGFDYLEVRKD 278
EK+K DY+ D
Sbjct: 284 TEKLKTKKDYVAWGND 299
>gi|356499630|ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Glycine max]
Length = 319
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 155/226 (68%), Gaps = 17/226 (7%)
Query: 38 SSVKTRRISTKTLALQQQQRQ----------HDVPLSSA-PQTPATAMRGAEADAMGLLL 86
+S KTRR TK L++ RQ HD S+A P P R E DA +LL
Sbjct: 33 ASTKTRR--TKPLSVVNASRQTLSSNWLVSPHDFSASTASPWLP----RFEELDATNMLL 86
Query: 87 KERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVR 146
++RI+FLG+ +DD AD IISQLL LDA+D KDI+LF+NSPGGS++A M IYD ++L +
Sbjct: 87 RQRIIFLGSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCK 146
Query: 147 ADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMH 206
ADVSTV LG++AS + IL GTKGKR+ MPN+RVMIHQP+G A G+ ++ I+ RE+ +
Sbjct: 147 ADVSTVCLGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAY 206
Query: 207 NKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+K +I+S TG+ EQ++ D DRD +M+P EA EYG++DGVID
Sbjct: 207 HKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVID 252
>gi|357508259|ref|XP_003624418.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355499433|gb|AES80636.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|388491500|gb|AFK33816.1| unknown [Medicago truncatula]
gi|388500216|gb|AFK38174.1| unknown [Medicago truncatula]
gi|388500532|gb|AFK38332.1| unknown [Medicago truncatula]
gi|388505002|gb|AFK40567.1| unknown [Medicago truncatula]
Length = 297
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%), Gaps = 5/195 (2%)
Query: 59 HDVPLSSA-PQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDP 117
HD+ +A P P + E D +LL++RIVFLG+ +DD AD +ISQLL LDA DP
Sbjct: 61 HDLSAKTASPWLP----KFEELDTTNMLLRQRIVFLGSQVDDMTADFVISQLLFLDADDP 116
Query: 118 TKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMP 177
TKDI+LF+NSPGGS++A M +YD ++L +ADVSTV LG++AS + +L GTKGKR+ MP
Sbjct: 117 TKDIKLFINSPGGSVTAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKGKRYCMP 176
Query: 178 NTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMS 237
N+RVMIHQP+G A G+ ++ I+ARE+M++K +I+S TG+ EQ++ D DRD +M+
Sbjct: 177 NSRVMIHQPLGSAGGKATEMSIRARELMYHKIKINKILSRITGKPEEQIELDTDRDNFMN 236
Query: 238 PIEAVEYGIIDGVID 252
P EA EYG+ID VID
Sbjct: 237 PWEAKEYGLIDDVID 251
>gi|217071428|gb|ACJ84074.1| unknown [Medicago truncatula]
Length = 297
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 142/195 (72%), Gaps = 5/195 (2%)
Query: 59 HDVPLSSA-PQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDP 117
HD+ +A P P + E D +LL++RIVFLG+ +DD AD +ISQLL LDA DP
Sbjct: 61 HDLSAKTASPWLP----KFEELDTTNMLLRQRIVFLGSQVDDMTADFVISQLLFLDADDP 116
Query: 118 TKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMP 177
TKDI+LF+NSPGGS++A M +YD ++L +ADVSTV LG++AS + +L GTKGKR+ MP
Sbjct: 117 TKDIKLFINSPGGSVTAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKGKRYCMP 176
Query: 178 NTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMS 237
N+RVMIHQP+G A G+ ++ I+ARE+M++K +I+S TG+ EQ++ D DRD +M+
Sbjct: 177 NSRVMIHQPLGSAGGKATEMSIRARELMYHKIKINKILSRITGKPEEQIELDTDRDNFMN 236
Query: 238 PIEAVEYGIIDGVID 252
P E EYG+ID VID
Sbjct: 237 PWEGKEYGLIDDVID 251
>gi|56201842|dbj|BAD73292.1| putative ATP-dependent Clp protease, proteolytic subunit [Oryza
sativa Japonica Group]
gi|125526129|gb|EAY74243.1| hypothetical protein OsI_02123 [Oryza sativa Indica Group]
gi|125570557|gb|EAZ12072.1| hypothetical protein OsJ_01953 [Oryza sativa Japonica Group]
Length = 308
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 167/277 (60%), Gaps = 12/277 (4%)
Query: 18 LYKPPNFSLSKSLPLSFKPISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGA 77
L+ PN K+ P + S+ RR TL+ ++P SA + A R
Sbjct: 18 LFLAPNPCCWKAAPRATVRASASAARR----TLS-----SAWELPGPSAARPAARKPRLE 68
Query: 78 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMA 137
E D +LL++RIVFLG+ +DD AD IISQLLLLDA+D TKDI+LF+NSPGGS++A M
Sbjct: 69 ELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMG 128
Query: 138 IYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDV 197
+YD ++ +AD+STV G++AS + +L GTKGKRF MPN R+MIHQP GGA G+V ++
Sbjct: 129 VYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEM 188
Query: 198 EIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS-- 255
+Q RE+M+ K +I+S TG+ EQ+ +D D +MSP EA +YGI+D VID
Sbjct: 189 GLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVIDEGKPG 248
Query: 256 -IIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDE 291
+ PL K YL P + + ++P +E
Sbjct: 249 LVAPLAGAVPPPKSRVWYLWNASGPTRKIMKNLPSEE 285
>gi|115436866|ref|NP_001043155.1| Os01g0507900 [Oryza sativa Japonica Group]
gi|113532686|dbj|BAF05069.1| Os01g0507900 [Oryza sativa Japonica Group]
gi|215734851|dbj|BAG95573.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 314
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 164/277 (59%), Gaps = 12/277 (4%)
Query: 18 LYKPPNFSLSKSLPLSFKPISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGA 77
L+ PN K+ P + S+ RR + L P SA + A R
Sbjct: 24 LFLAPNPCCWKAAPRATVRASASAARRTLSSAWEL---------PGPSAARPAARKPRLE 74
Query: 78 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMA 137
E D +LL++RIVFLG+ +DD AD IISQLLLLDA+D TKDI+LF+NSPGGS++A M
Sbjct: 75 ELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMG 134
Query: 138 IYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDV 197
+YD ++ +AD+STV G++AS + +L GTKGKRF MPN R+MIHQP GGA G+V ++
Sbjct: 135 VYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEM 194
Query: 198 EIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS-- 255
+Q RE+M+ K +I+S TG+ EQ+ +D D +MSP EA +YGI+D VID
Sbjct: 195 GLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVIDEGKPG 254
Query: 256 -IIPLVPVPEKVKPGFDYLEVRKDPRKFLTPDVPDDE 291
+ PL K YL P + + ++P +E
Sbjct: 255 LVAPLAGAVPPPKSRVWYLWNASGPTRKIMKNLPSEE 291
>gi|255583777|ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223527632|gb|EEF29744.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 334
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/260 (45%), Positives = 172/260 (66%), Gaps = 8/260 (3%)
Query: 1 MDLLSVSSTSTSHLHFSLYKP---PNFSLSKSLPLSFKPISSVKTRR-ISTKTLALQQQ- 55
+ +SVS +++S L FS +K P + + S ++ K R+ IS K + +++
Sbjct: 5 LSFISVSQSTSSPLCFSNHKQFLLPTINTTDSNKAKVSISTNGKRRKPISVKAVNTRKET 64
Query: 56 -QRQHDVP-LSSAPQTPATAM-RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
DV SS+ T + A+ R E D +LL++RI+FLG+ +DD AD +ISQLL L
Sbjct: 65 LSSNWDVANFSSSFATSSPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFVISQLLFL 124
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
DA+DPTKDI+LF+NSPGGS++A + IYD ++L +ADVST+ LG++AS + +L GTKGK
Sbjct: 125 DAEDPTKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTICLGLAASMGAFLLAAGTKGK 184
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
RF MPN RVMIHQP+G A G+ ++ I+ RE+ ++K +I+S TG+ EQ++ D DR
Sbjct: 185 RFCMPNGRVMIHQPLGTAGGKATEMSIRIREMNYHKIKLNKILSRATGKPVEQIEVDTDR 244
Query: 233 DRYMSPIEAVEYGIIDGVID 252
D +MS EA EYG+ID VID
Sbjct: 245 DNFMSAWEAKEYGLIDVVID 264
>gi|412985965|emb|CCO17165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bathycoccus
prasinos]
Length = 263
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 136/180 (75%)
Query: 75 RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
R D +LL++RIV LGN +DDF+ADAIISQLLLL+ QDPTK I+LF+NSPGGS++A
Sbjct: 58 RSEAGDPFQMLLRQRIVMLGNQVDDFIADAIISQLLLLNQQDPTKPIKLFINSPGGSVTA 117
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
M IYD +Q V+A V TV +G++AS + +L G KGKR +MPN R+MIHQP+GGASGQ
Sbjct: 118 GMGIYDAMQFVQAPVGTVCMGLAASMGAFLLTAGEKGKRLSMPNARIMIHQPLGGASGQA 177
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+D+EIQA+E+M +K ++++ +G+ E++ D DRDRYMSP+EA YG+ID VI D
Sbjct: 178 VDIEIQAKEMMFHKGRLNQLMAFHSGQPVEKIDVDTDRDRYMSPLEAKNYGLIDEVIGGD 237
>gi|116784526|gb|ABK23378.1| unknown [Picea sitchensis]
Length = 341
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 135/178 (75%)
Query: 75 RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
R + D +LL++RIVFLG+ +DD AD IISQLLLLD +D TKDI+LF+NSPGGS++A
Sbjct: 94 RPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTA 153
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
M IYD ++L +ADVSTV G++AS + +L GT+GKRF MPN +VMIHQP+GG G
Sbjct: 154 GMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSA 213
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+++ +QA+E+M++K T+I+S T +S EQ+ KD DRD +++P EAVEYG+ D VID
Sbjct: 214 IEMALQAKELMYHKIKLTKIMSRLTDKSEEQIAKDTDRDYFLNPWEAVEYGLADAVID 271
>gi|116786337|gb|ABK24071.1| unknown [Picea sitchensis]
Length = 341
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 135/178 (75%)
Query: 75 RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
R + D +LL++RIVFLG+ +DD AD IISQLLLLD +D TKDI+LF+NSPGGS++A
Sbjct: 94 RPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTA 153
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
M IYD ++L +ADVSTV G++AS + +L GT+GKRF MPN +VMIHQP+GG G
Sbjct: 154 GMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSA 213
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+++ +QA+E+M++K T+I+S T +S EQ+ KD DRD +++P EAVEYG+ D VID
Sbjct: 214 IEMALQAKELMYHKIKLTKIMSRLTDKSGEQIAKDTDRDYFLNPWEAVEYGLADAVID 271
>gi|449463450|ref|XP_004149447.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
proteolytic subunit 3, chloroplastic-like [Cucumis
sativus]
Length = 339
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 138/194 (71%)
Query: 75 RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
R E D +LL++RI+FLG+ +DD AD IISQLL LDA+DPTKDI+LF+NSPGGS++A
Sbjct: 91 RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTA 150
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
M IYD ++L +ADVSTV LG++AS + +L G+KGKRF MPN RVMIHQP+G A G+
Sbjct: 151 XMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKA 210
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
++ I+ RE+ ++K +I S TG+ EQ++ D +RD +M+P EA EYG+ID VID
Sbjct: 211 TEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDG 270
Query: 255 SIIPLVPVPEKVKP 268
+ P+ E P
Sbjct: 271 KPGLIAPIAEATPP 284
>gi|168013186|ref|XP_001759282.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689595|gb|EDQ75966.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 205
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 138/185 (74%)
Query: 84 LLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQ 143
+LL++RI+FLG+ +DDF AD IISQLLLLDAQDPTKDI+LF+NSPGGS++A M IYD ++
Sbjct: 9 MLLQQRILFLGSQVDDFSADVIISQLLLLDAQDPTKDIKLFINSPGGSVTAGMGIYDAMK 68
Query: 144 LVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQARE 203
L +ADVSTV G++AS + +L GTKGKR+ MPN RVMIHQP+GGA G +D +Q RE
Sbjct: 69 LCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARVMIHQPLGGAGGTAIDGALQVRE 128
Query: 204 IMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+M++K +I+S TG+ +V+ D DRD +M+ EA EYG++DGVI + + P+
Sbjct: 129 MMYHKYKLQKIMSRLTGQPEAKVEADTDRDNFMNAWEAKEYGLVDGVIGDGNPDIVAPIG 188
Query: 264 EKVKP 268
++P
Sbjct: 189 SPIEP 193
>gi|449521259|ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Cucumis sativus]
Length = 339
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 138/194 (71%)
Query: 75 RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
R E D +LL++RI+FLG+ +DD AD IISQLL LDA+DPTKDI+LF+NSPGGS++A
Sbjct: 91 RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTA 150
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
M IYD ++L +ADVSTV LG++AS + +L G+KGKRF MPN RVMIHQP+G A G+
Sbjct: 151 GMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKA 210
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
++ I+ RE+ ++K +I S TG+ EQ++ D +RD +M+P EA EYG+ID VID
Sbjct: 211 TEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDG 270
Query: 255 SIIPLVPVPEKVKP 268
+ P+ E P
Sbjct: 271 KPGLIAPIAEATPP 284
>gi|242053033|ref|XP_002455662.1| hypothetical protein SORBIDRAFT_03g018270 [Sorghum bicolor]
gi|241927637|gb|EES00782.1| hypothetical protein SORBIDRAFT_03g018270 [Sorghum bicolor]
Length = 313
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 153/235 (65%), Gaps = 4/235 (1%)
Query: 61 VPLSSAPQTPAT-AMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
VP A PA R E D +LL++RIVFLG+++DD AD IISQLLLLDA+D TK
Sbjct: 56 VPSGLAVARPAARKARLEELDTSNMLLRQRIVFLGSSVDDTSADLIISQLLLLDAEDQTK 115
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI+LF+NSPGGS++A M +YD ++ +ADVSTV G++AS + +L GTKGKR+ MPN
Sbjct: 116 DIKLFINSPGGSITAGMGVYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNA 175
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP GGA G+V ++ +Q RE+M+ K +I+S TG+S EQ+ +D D +MSP
Sbjct: 176 RIMIHQPSGGAGGKVTEMGLQIREMMYEKIKINKIMSRITGKSKEQIDEDTKFDYFMSPW 235
Query: 240 EAVEYGIIDGVIDRDSIIPLVPVPEKVKP---GFDYLEVRKDPRKFLTPDVPDDE 291
EA +YGI+D +ID + P+ V+P YL P + + +P +E
Sbjct: 236 EAKDYGIVDSIIDEGKPGLVAPLAGSVRPPKSRVWYLWKASGPTRKIMKHLPSEE 290
>gi|388495948|gb|AFK36040.1| unknown [Lotus japonicus]
Length = 324
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 155/235 (65%), Gaps = 8/235 (3%)
Query: 36 PISSVKTRRISTKTLALQQQQRQHDVP--LSSAPQTPATAMRGAEADAMGLLLKERIVFL 93
P+ +V + +TL+ D+P LS++ +P + E D +LL++RIVFL
Sbjct: 44 PLFTVNASSTTRQTLS-----SNWDLPNDLSASTASPWLP-KLEELDTTNMLLRQRIVFL 97
Query: 94 GNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVA 153
G+ +DD AD IISQLL LDA+D KDI+LF+NSPGGS++ M IYD ++L +ADVSTV
Sbjct: 98 GSQVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTTGMGIYDAMKLCKADVSTVC 157
Query: 154 LGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTR 213
LG++AS + IL GTKGKR+ MPN+RVMIHQP+G A G+ ++ I+ RE+ ++K +
Sbjct: 158 LGLAASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINK 217
Query: 214 IISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKP 268
I+S TG+ EQ++ D DRD +M+P EA EYG++DGVID + P E P
Sbjct: 218 ILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDEGKPGLIAPTAEASAP 272
>gi|253575504|ref|ZP_04852841.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845151|gb|EES73162.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 198
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG+ ++D VA++II+Q+L LDA+DPTKDI
Sbjct: 1 MSYIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLDAEDPTKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ADVST+ +G++AS + +L G GKR+A+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQFIKADVSTICVGLAASMGAFLLNAGAPGKRYALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI+S TG+ E+++KD DRD +MS EA
Sbjct: 121 MIHQPLGGAEGQATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMSAAEA 180
Query: 242 VEYGIIDGVIDR 253
EYG+ID VI++
Sbjct: 181 KEYGLIDQVIEK 192
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6.1|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 153/212 (72%), Gaps = 4/212 (1%)
Query: 45 ISTKTLALQQQQRQHDVPLSS---APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDF 100
I+TK + Q + + D+P S P + RG A D LL+ERI+FLG +++D
Sbjct: 2 INTKCIHPVQNKWKGDLPCSGPGVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVNDQ 61
Query: 101 VADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAST 160
+ADA+++Q+L L+A+DP KDI+L++NSPGGS++A +AIYD +Q V D+ T+ G++AS
Sbjct: 62 IADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASM 121
Query: 161 ASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTG 220
+ +L GG+KGKR A+PN+R+MIHQP+GGA GQ +++EIQA+EI+ K+ +++ TG
Sbjct: 122 GAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTG 181
Query: 221 RSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+S E++ +D DRD ++SP EAVEYG+ID V++
Sbjct: 182 QSLEKISEDTDRDHFLSPQEAVEYGLIDKVVN 213
>gi|224079413|ref|XP_002305856.1| predicted protein [Populus trichocarpa]
gi|222848820|gb|EEE86367.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 147/222 (66%), Gaps = 4/222 (1%)
Query: 31 PLSFKPISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEADAMGLLLKERI 90
P+ K S + +TLA + +SAP P + E D +LL++RI
Sbjct: 53 PICVKASKSSFDANTARQTLASNWDVEKFSSFANSAPTLP----KFEELDTTNMLLRQRI 108
Query: 91 VFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVS 150
+FLG+ +DD AD IISQLL LDA+DP KDI+LF+NSPGGS++A + IYD ++L +ADVS
Sbjct: 109 IFLGSQVDDVTADFIISQLLFLDAEDPKKDIKLFINSPGGSVTAGLGIYDAMKLCKADVS 168
Query: 151 TVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDN 210
T+ LG++AS + +L G+KGKRF MPN RVMIHQP+G A G+ ++ I+ RE+ ++K
Sbjct: 169 TICLGLAASMGAFLLSAGSKGKRFCMPNGRVMIHQPLGTAGGKASEMSIRIREMSYHKIK 228
Query: 211 FTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+I+S TG+ EQV+ D DRD +M+ EA EYG++D VID
Sbjct: 229 LNKILSRITGKPLEQVEVDTDRDNFMNAWEAKEYGLVDEVID 270
>gi|223947307|gb|ACN27737.1| unknown [Zea mays]
gi|413948196|gb|AFW80845.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 310
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 78 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMA 137
E D +LL++RIVFLG+ +DD AD IISQLLLLDA+D TKDI+LF+NSPGGS++A M
Sbjct: 71 ELDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMG 130
Query: 138 IYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDV 197
+YD ++ +ADVSTV G++AS + +L GTKGKR+ MPN R+MIHQP GGA G+V ++
Sbjct: 131 VYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARIMIHQPSGGAGGKVTEM 190
Query: 198 EIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
+Q RE+M+ K +I+S TG+S EQ+ +D D +MSP EA +YGI+D +ID
Sbjct: 191 GLQIREMMYEKIKINKIMSRITGKSEEQIDEDTKFDYFMSPSEAKDYGIVDNIIDEGKPG 250
Query: 258 PLVPVPEKVKP---GFDYLEVRKDPRKFLTPDVPDDE 291
+ P+ V P YL P + + +P +E
Sbjct: 251 LVAPLAGSVPPPKSRVWYLWKASGPTRKIMKHLPSEE 287
>gi|168043511|ref|XP_001774228.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674496|gb|EDQ61004.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 243
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 138/185 (74%)
Query: 84 LLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQ 143
+LL++RI+FLG+ +DDF AD IISQ+LLLDAQDPT+DI+LF+NSPGGS++A M IYD ++
Sbjct: 24 MLLQQRILFLGSQVDDFSADLIISQMLLLDAQDPTRDIKLFINSPGGSVTAGMGIYDAMK 83
Query: 144 LVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQARE 203
L +ADVSTV G++AS + +L GTKGKR+ MPN RVMIHQP+GGA G +D +Q RE
Sbjct: 84 LCKADVSTVCFGLAASMGAFLLTAGTKGKRYCMPNARVMIHQPLGGAGGTAIDGALQVRE 143
Query: 204 IMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+M +K +I+S TG+ +V+ D DRD +M+ EA+EYG++DGVI + + P+
Sbjct: 144 MMFHKYKLQKIMSRLTGQPEARVEADTDRDNFMNAWEAMEYGLVDGVIGDGNPDLVAPIG 203
Query: 264 EKVKP 268
++P
Sbjct: 204 SPIEP 208
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
Length = 229
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG IDD VADA+++QLL L+A+DP KDI++++NSPGGS++
Sbjct: 40 RGERAFDIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYINSPGGSVT 99
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQPMGGA GQ
Sbjct: 100 AGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQ 159
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+D+EIQA+EI++ K+ +++ TG+ E + +D DRD ++SP EAVEYG+ID V+D
Sbjct: 160 AVDIEIQAQEILYLKETLNGLMAEHTGQPLETIAEDTDRDHFLSPAEAVEYGLIDRVVD 218
>gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942]
Length = 302
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 161/244 (65%), Gaps = 13/244 (5%)
Query: 18 LYKPPN--FSLSKSLPLSFKPISSVKTRRISTKTLALQQQQRQHDVPLSSA--PQTPATA 73
LY P+ FS SLP + +RR++ + QQ + + S A P +
Sbjct: 56 LYPVPSSMFSSHASLP--------IHSRRLAAGLDSRWQQPQIQAIAGSQAIVPTVVEQS 107
Query: 74 MRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSL 132
RG A D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS+
Sbjct: 108 GRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSV 167
Query: 133 SATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASG 192
+A MAIYD +Q V DV+T+ G++AS + +L GG +GKR A+P+ R+MIHQP+GGA G
Sbjct: 168 TAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQG 227
Query: 193 QVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
Q +D+EIQAREI+++K +++ TG+ E+++ D DRD +MSP EA YG+ID V+
Sbjct: 228 QAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLT 287
Query: 253 RDSI 256
R ++
Sbjct: 288 RPTM 291
>gi|225453100|ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic [Vitis vinifera]
Length = 320
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 146/218 (66%), Gaps = 5/218 (2%)
Query: 35 KPISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEADAMGLLLKERIVFLG 94
+ +S VK S TLA D+ + P R + D +LL++RIVFLG
Sbjct: 41 RAVSMVKASSASRPTLA-----SNWDLSSLQSASAPTWLPRFEDLDTTNMLLRQRIVFLG 95
Query: 95 NNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVAL 154
+ +DD AD +ISQLL LDA+D KDI+LF+NSPGGS++A + IYD ++L +ADVSTV L
Sbjct: 96 SQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTVCL 155
Query: 155 GMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRI 214
G++AS + +L G+KGKRF MPN+RVMIHQP+G A G+ ++ I+ RE+M++K +I
Sbjct: 156 GLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMGIRIREMMYHKIKLNKI 215
Query: 215 ISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+S TG+ +Q++ D DRD +M+ EA EYG+ID VID
Sbjct: 216 LSRITGKPEQQIEADTDRDNFMNAWEAKEYGLIDAVID 253
>gi|389843764|ref|YP_006345844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
gi|387858510|gb|AFK06601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
Length = 205
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 137/171 (80%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL ERIVFLG IDD V++ +++QLL L++QDP KDI L++NSPGGS+++ +AIYD +Q
Sbjct: 29 LLSERIVFLGWPIDDEVSNIVVAQLLFLESQDPEKDINLYINSPGGSITSGLAIYDTMQY 88
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ D+ST+ +GM+AS +++L GGTKGKRFA+PN+RVMIHQP GGA G D+EI+AREI
Sbjct: 89 IKPDISTICIGMAASMGAILLAGGTKGKRFALPNSRVMIHQPFGGAEGVAKDIEIRAREI 148
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
++ +D +I++ TG+S ++++KD DRD +MS EAVEYG+ID VI++ +
Sbjct: 149 LYLRDELNKILAKHTGQSIKKIEKDADRDFFMSSTEAVEYGMIDKVIEQKA 199
>gi|318043033|ref|ZP_07974989.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0101]
Length = 194
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG IDD VADA+++QLL L+A+DP KDI+++VNSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYVNSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQP+GGA GQ
Sbjct: 71 AGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+D+EIQA+EI++ KD +++ TG+ E++ +D DRD ++SP EAV+YG+ID V+
Sbjct: 131 AVDIEIQAKEILYLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVQYGLIDRVVTD 190
Query: 254 DS 255
D+
Sbjct: 191 DA 192
>gi|297841293|ref|XP_002888528.1| hypothetical protein ARALYDRAFT_894344 [Arabidopsis lyrata subsp.
lyrata]
gi|297334369|gb|EFH64787.1| hypothetical protein ARALYDRAFT_894344 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 157/250 (62%), Gaps = 1/250 (0%)
Query: 4 LSVSSTSTSHLHFSLYKPPNFSL-SKSLPLSFKPISSVKTRRISTKTLALQQQQRQHDVP 62
L+ SSTS + K NF + ++ +P + KP + S L
Sbjct: 7 LASSSTSNPICLINPGKKLNFPIRNQRIPKTTKPFCVRSSMSSSKPRQTLSSNWDVSSFS 66
Query: 63 LSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
+ S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDA+D +DI
Sbjct: 67 VDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDIT 126
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
LF+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN++VM
Sbjct: 127 LFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVM 186
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P EA
Sbjct: 187 IHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIEGDTDRDNFLNPWEAK 246
Query: 243 EYGIIDGVID 252
EYG+ID VID
Sbjct: 247 EYGLIDAVID 256
>gi|411119403|ref|ZP_11391783.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711266|gb|EKQ68773.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 229
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 139/185 (75%), Gaps = 1/185 (0%)
Query: 73 AMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGS 131
A RG A D LL+ERIVFLG IDD VAD++++QLL L+A+DP KDI+L++NSPGGS
Sbjct: 35 AGRGERAFDIYSRLLRERIVFLGTPIDDAVADSVVAQLLFLEAEDPEKDIQLYINSPGGS 94
Query: 132 LSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGAS 191
++A MAIYD +Q VR DV+T+ G++AS + +L GT GKR ++P++RVMIHQP+GGA
Sbjct: 95 VTAGMAIYDTMQQVRCDVATICFGLAASMGAFLLASGTTGKRMSLPSSRVMIHQPLGGAQ 154
Query: 192 GQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
GQ +D+EIQA+EI+++K ++S T + FE+++ D +RD +MS EA EYG+ID VI
Sbjct: 155 GQAVDIEIQAKEILYHKRKLNELLSYHTRQPFEKIEADTERDFFMSAAEAKEYGLIDQVI 214
Query: 252 DRDSI 256
R ++
Sbjct: 215 SRQNL 219
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 133/172 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERIVFLG +DD VAD+I++QLL L+A+D KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 49 LLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPGGSVTAGMAIYDTMQQ 108
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DV T+ G++AS + +L GG GKR A+PN+R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 109 VRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQPLGGAQGQAVDIEIQAREI 168
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+++K ++++ TG+ EQ+ +D +RD +MS EA +YG+ID VI R ++
Sbjct: 169 LYHKQTLNQLLANHTGQPVEQIAEDTERDFFMSAAEAKDYGLIDQVISRQNL 220
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+FLG+ IDD VA+ +I+Q+L L+A+DP KDI L++
Sbjct: 6 PMVVEQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYI 65
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA MAI+D +Q +R DVST+ +G++AS + +L G KGKRFA+PN+ +MIHQ
Sbjct: 66 NSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQ 125
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
PMGG GQ +D+EI A+ I+ +DN RI+S TG+ EQ+ +D DRD +M+ EA EYG
Sbjct: 126 PMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYG 185
Query: 246 IIDGVIDR 253
+ID VI +
Sbjct: 186 LIDEVITK 193
>gi|81301334|ref|YP_401542.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|81170215|gb|ABB58555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 244
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 155/233 (66%), Gaps = 11/233 (4%)
Query: 24 FSLSKSLPLSFKPISSVKTRRISTKTLALQQQQRQHDVPLSSA--PQTPATAMRGAEA-D 80
FS SLP + +RR++ + QQ + + S A P + RG A D
Sbjct: 6 FSSHASLP--------IHSRRLAAGLDSRWQQPQIQAIAGSQAIVPTVVEQSGRGERAFD 57
Query: 81 AMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYD 140
LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS++A MAIYD
Sbjct: 58 IYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYD 117
Query: 141 VVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQ 200
+Q V DV+T+ G++AS + +L GG +GKR A+P+ R+MIHQP+GGA GQ +D+EIQ
Sbjct: 118 TMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQ 177
Query: 201 AREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+++K +++ TG+ E+++ D DRD +MSP EA YG+ID V+ R
Sbjct: 178 AREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTR 230
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 136/180 (75%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG ++D VA+AII+QLL LDAQDP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +++DVST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKSDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGAEGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI+AR I+ ++N +I++ TG+ E++ KD DRD +MS EA YG+ID VI++
Sbjct: 133 ATDIEIRARRILKMRENLNKILAERTGQPLERIDKDTDRDYFMSAAEASAYGLIDKVIEK 192
>gi|56751593|ref|YP_172294.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|3023500|sp|O34125.1|CLPP2_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460442|sp|Q5N1P6.1|CLPP3_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|15620530|gb|AAL03914.1|U30252_2 ClpP2 [Synechococcus elongatus PCC 7942]
gi|2351823|gb|AAB68677.1| ATP-dependent Clp protease, proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686552|dbj|BAD79774.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
Length = 240
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 155/233 (66%), Gaps = 11/233 (4%)
Query: 24 FSLSKSLPLSFKPISSVKTRRISTKTLALQQQQRQHDVPLSSA--PQTPATAMRGAEA-D 80
FS SLP + +RR++ + QQ + + S A P + RG A D
Sbjct: 2 FSSHASLP--------IHSRRLAAGLDSRWQQPQIQAIAGSQAIVPTVVEQSGRGERAFD 53
Query: 81 AMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYD 140
LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS++A MAIYD
Sbjct: 54 IYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYD 113
Query: 141 VVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQ 200
+Q V DV+T+ G++AS + +L GG +GKR A+P+ R+MIHQP+GGA GQ +D+EIQ
Sbjct: 114 TMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQ 173
Query: 201 AREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+++K +++ TG+ E+++ D DRD +MSP EA YG+ID V+ R
Sbjct: 174 AREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTR 226
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA+AI+SQLL L+A+DP KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ DV T+ +GM+AS S +L GTKGKR+A+PN+ +MIHQ
Sbjct: 65 NSPGGSVTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGTKGKRYALPNSEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ RI++ TG+ E ++KD DRD YMS +A+EYG
Sbjct: 125 PLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEVIEKDTDRDNYMSAEQALEYG 184
Query: 246 IIDGVIDRDS 255
IID ++ R+
Sbjct: 185 IIDKIMVRNE 194
>gi|226507940|ref|NP_001149210.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
gi|195625490|gb|ACG34575.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
Length = 285
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 135/191 (70%)
Query: 78 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMA 137
E D +LL++RIVFLG+ +DD AD IISQLLLLDA+D TKDI+LF+NSPGGS++A M
Sbjct: 71 ELDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMG 130
Query: 138 IYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDV 197
+YD ++ +ADVSTV G++AS + +L GTKGKR+ PN R+MIHQP GGA G+V ++
Sbjct: 131 VYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCXPNARIMIHQPSGGAGGKVTEM 190
Query: 198 EIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
+Q RE+M+ K +I+S TG+S EQ+ +D D +MSP EA +YGI+D +ID
Sbjct: 191 GLQIREMMYEKIKINKIMSRITGKSEEQIDEDTKFDYFMSPSEAKDYGIVDNIIDEGKPG 250
Query: 258 PLVPVPEKVKP 268
+ P+ V P
Sbjct: 251 LVAPLAGSVPP 261
>gi|428312433|ref|YP_007123410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428254045|gb|AFZ20004.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 230
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 134/172 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD VAD+II+QLL LDA+DP KDI+L++NSPGGS++A MA+YD +Q
Sbjct: 48 LLRERIIFLGTQVDDTVADSIIAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAMYDTMQQ 107
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L G GKR A+PN+R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 108 IRPDVVTICFGLAASMGAFLLTAGAPGKRMALPNSRIMIHQPLGGAQGQAIDIEIQAREI 167
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+++K ++++ TG+S E+++ D +RD +MS EA +YG+ID VI R ++
Sbjct: 168 LYHKRTLNQLLAHHTGQSLEKIEADTERDFFMSAAEAKDYGLIDQVITRQNL 219
>gi|357132254|ref|XP_003567746.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic-like [Brachypodium distachyon]
Length = 309
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 78 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMA 137
E D +LL++RI+FLG+ +DD AD IISQLLLLDA+D TKDI+LF+NSPGGS++A M
Sbjct: 70 ELDTSNMLLRQRIIFLGSPVDDMSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMG 129
Query: 138 IYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDV 197
IYD ++ ++D+STV G++AS + +L GTKGKRF MPN RVMIHQP GGA G+ ++
Sbjct: 130 IYDAMKFCKSDISTVCFGLAASMGAFLLASGTKGKRFCMPNARVMIHQPSGGAGGKATEM 189
Query: 198 EIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
+Q RE+++ K +I+S TG+ Q+ +D D +MSP EA +YGI+D +ID +
Sbjct: 190 GLQIREMLYEKIKINKIMSRITGKPEAQIDEDTKFDYFMSPWEAKDYGIVDSIIDEGKLG 249
Query: 258 PLVPVPEKVKP---GFDYLEVRKDPRKFLTPDVPDDE 291
+ P+ V P YL P + + ++P +E
Sbjct: 250 LVAPMAGAVPPPKSRVWYLWNASGPTRKIMKNLPSEE 286
>gi|434399019|ref|YP_007133023.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270116|gb|AFZ36057.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 227
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG IDD VAD+I++QLL L+A+DP KDI+L++NSPGGS+ + MAIY
Sbjct: 41 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYSGMAIY 100
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ D+ T+ G++AS + +L GGTKGKR A+P++R+MIHQP+GGA GQ +D+EI
Sbjct: 101 DTMQQIQPDIVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIEI 160
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QAREI++ K +I+ TG+ FE+V D +RD YMS EA EYG+ID VI R + P
Sbjct: 161 QAREILYIKKRLNDLIAEHTGQPFEKVAADTERDFYMSAQEAQEYGLIDQVIIRQQLADP 220
Query: 259 LVPV 262
VPV
Sbjct: 221 KVPV 224
>gi|427417857|ref|ZP_18908040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760570|gb|EKV01423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 200
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 141/187 (75%), Gaps = 1/187 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG+ +DD +AD+I++QLL LD++DP KD+++++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIVFLGSGVDDTLADSIVAQLLYLDSEDPEKDVQIYINSPGGSIT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DV T+ G++AS + +L GG KGKR A+P++R+MIHQP+GGA GQ
Sbjct: 71 AGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+D+EIQAREI++ K +++G TG+ +++ +D +RD +MS EA +YG+ID VI R
Sbjct: 131 AVDIEIQAREILYLKQRLNELLAGHTGQPLDRIAEDTERDFFMSAAEAADYGLIDTVISR 190
Query: 254 DSIIPLV 260
D+ L+
Sbjct: 191 DTTADLM 197
>gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 237
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 6/222 (2%)
Query: 36 PISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLG 94
PI+S+ T I L P S P + G A D LL+ERI+FLG
Sbjct: 10 PITSLSTMNIQCGYNNLNPTS-----PSSIVPMVVEQSGMGERAFDIYSRLLRERIIFLG 64
Query: 95 NNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVAL 154
IDD VA++I++QLL LDA+DP KD++L++NSPGGS+ A MAIYD +Q +R DV T+
Sbjct: 65 TAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICF 124
Query: 155 GMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRI 214
G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI++ K N ++
Sbjct: 125 GLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKANLNQL 184
Query: 215 ISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+S TG+ E+++ D +RD +MSP EA +YG+ID VI R ++
Sbjct: 185 MSKHTGQPLERIEADTERDFFMSPQEAKDYGLIDQVISRQNL 226
>gi|403385525|ref|ZP_10927582.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC30]
Length = 201
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA+AI+SQLL L+A+DP KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGKKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A+ I+ ++ RI+S TG+ E ++KD DRD YMS A+EYG
Sbjct: 125 PLGGAQGQATEIEIAAKHILKTREKLNRILSERTGQPIEIIEKDTDRDNYMSAERALEYG 184
Query: 246 IIDGVIDRDS 255
IID ++ R+
Sbjct: 185 IIDKIMTRNE 194
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 159/233 (68%), Gaps = 5/233 (2%)
Query: 34 FKPI--SSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERI 90
FKPI + +++R + T++ ++ + P S P + G A D LL+ERI
Sbjct: 27 FKPILKTMIESRSLDY-TISSKRPSEIYAAPESVVPMVVEQSGVGERAFDIYSRLLRERI 85
Query: 91 VFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVS 150
VFLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIYD +Q +R DV
Sbjct: 86 VFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVV 145
Query: 151 TVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDN 210
T+ G++AS + +L GGTKGKR A+P++R+MIHQP+GGA GQ +++EIQA+EI++ K
Sbjct: 146 TICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAKEILYIKKR 205
Query: 211 FTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-PLVPV 262
+++ TG+ F+ + D +RD +MS EAV+YG+ID VI R + P VPV
Sbjct: 206 LNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLIDKVISRSDLSDPTVPV 258
>gi|317968359|ref|ZP_07969749.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0205]
Length = 194
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG+ IDD VADA+++QLL L+A+DP KDI+++VNSPGGS++
Sbjct: 11 RGDRAFDIYSRLLRERIIFLGSGIDDQVADAMVAQLLFLEAEDPEKDIQIYVNSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQP+GGA GQ
Sbjct: 71 AGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+D+EIQA+EI++ K+ ++S TG+ E++ +D DRD ++SP EAV+YG+ID V+
Sbjct: 131 AVDIEIQAKEILYLKETLNGLMSEHTGQPLEKIAEDTDRDYFLSPAEAVQYGLIDRVV 188
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 232
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +DD +A I+SQLL L+A+DP KDI L++NSPGGS++
Sbjct: 42 RGERAFDIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIYLYINSPGGSVT 101
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q V+ DVST+ +G++AS + +L G KGKR A+PN R+MIHQP+GGA GQ
Sbjct: 102 AGMAIYDTLQHVQPDVSTICMGLAASMGAFLLSAGAKGKRMALPNARIMIHQPLGGARGQ 161
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+D+EIQA+EI+++K+ ++++ TG+S ++++ D +RD +MSP EA EYG+ID V+
Sbjct: 162 AVDIEIQAKEILYHKNTLNQLLAEHTGQSLDRIEADTERDFFMSPAEAKEYGLIDTVL 219
>gi|428774108|ref|YP_007165896.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688387|gb|AFZ48247.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 238
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 150/228 (65%), Gaps = 15/228 (6%)
Query: 33 SFKPISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEADAMGLLLKERIVF 92
S+ +S+ KT IS T VP+ ++ M D LL+ERI+F
Sbjct: 14 SYGHLSTPKTESISNNTT----------VPMV----VESSGMGEKVFDVYSRLLRERIIF 59
Query: 93 LGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTV 152
LG IDD +AD++++QLL L+A+DP KDI +++NSPGGS+ + MAIYD +Q + DVST+
Sbjct: 60 LGTAIDDKLADSVVAQLLYLEAEDPKKDIYIYINSPGGSVYSGMAIYDTMQQIEPDVSTI 119
Query: 153 ALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFT 212
G++AS + +L GG KGKR +PN+R+MIHQP+GGA GQ D+EIQA+EI++ K
Sbjct: 120 CYGIAASMGAFLLAGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEIQAKEILYIKQRLN 179
Query: 213 RIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI-IPL 259
I++ TG+ FE++ +D +RD YMS EA EYGIID +I RD + +PL
Sbjct: 180 EILTHHTGQPFERISEDTERDFYMSSTEAKEYGIIDDIILRDGVSLPL 227
>gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 236
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 150/222 (67%), Gaps = 7/222 (3%)
Query: 36 PISSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLG 94
PI+S+ T I + + P S P + G A D LL+ERI+FLG
Sbjct: 10 PITSLTTMNIQCGYNGI------NPSPSSIVPMVVEQSGMGERAFDIYSRLLRERIIFLG 63
Query: 95 NNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVAL 154
IDD VA++I++QLL LDA+DP KD++L++NSPGGS+ A MAIYD +Q +R DV T+
Sbjct: 64 TAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICF 123
Query: 155 GMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRI 214
G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI++ K N ++
Sbjct: 124 GLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKANLNQL 183
Query: 215 ISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+S TG+ E+++ D +RD +MSP EA +YG+ID VI R ++
Sbjct: 184 MSKHTGQPLERIEADTERDFFMSPQEAKDYGLIDQVISRQNL 225
>gi|427724491|ref|YP_007071768.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356211|gb|AFY38934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 218
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 132/167 (79%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG+ IDD VAD+I++QLL LDA+D KDI+++VNSPGGS+ A MAIYD +Q
Sbjct: 47 LLRERIIFLGSAIDDTVADSIVAQLLFLDAEDAEKDIQIYVNSPGGSVYAGMAIYDTMQQ 106
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GGTKGKR A+P++RVMIHQP+GGA GQ +D+EIQA+EI
Sbjct: 107 IRPDVVTICYGIAASMGAFLLSGGTKGKRMALPSSRVMIHQPLGGAQGQAVDIEIQAKEI 166
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ K+ +I+ TG++F++V +D +RD YMS EA YG+ID VI
Sbjct: 167 LYIKEKLNSLIADHTGQAFDKVAEDTERDFYMSAEEACAYGLIDKVI 213
>gi|443316648|ref|ZP_21046084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442783734|gb|ELR93638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 226
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG + D VADAI++QLL LDA++P KD+++++NSPGGS++
Sbjct: 35 RGERAFDIYSRLLRERIVFLGTPVTDAVADAIVAQLLFLDAEEPEKDVQIYINSPGGSVT 94
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DV T+ G++AS + +L GG KGKR ++P++R+M+HQP+GGA GQ
Sbjct: 95 AGMAIYDTMQQIRPDVVTICFGLAASMGAFLLCGGAKGKRLSLPSSRIMVHQPLGGAQGQ 154
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+D+EIQAREI+++K +I+ +G++ E+++ D +RD YMS EA YG+ID V++R
Sbjct: 155 AVDIEIQAREILYHKQRLNELIAHHSGQTLERIEADTERDFYMSAEEAKRYGLIDQVVER 214
Query: 254 DSIIPLVPV 262
++ P+
Sbjct: 215 QNLSAASPL 223
>gi|18408572|ref|NP_564880.1| ATP-dependent Clp protease proteolytic subunit 3 [Arabidopsis
thaliana]
gi|75314059|sp|Q9SXJ6.1|CLPP3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic; AltName: Full=Endopeptidase ClpP3;
Short=nClpP3; AltName: Full=nClpP4; Flags: Precursor
gi|12322291|gb|AAG51173.1|AC079285_6 ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
gi|12597762|gb|AAG60075.1|AC013288_9 ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
gi|5360591|dbj|BAA82067.1| nClpP3 [Arabidopsis thaliana]
gi|21592949|gb|AAM64899.1| ATP-dependent Clp protease proteolytic subunit ClpP3 [Arabidopsis
thaliana]
gi|332196422|gb|AEE34543.1| ATP-dependent Clp protease proteolytic subunit 3 [Arabidopsis
thaliana]
Length = 309
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 161/253 (63%), Gaps = 6/253 (2%)
Query: 4 LSVSSTSTSHLHFSLYKPPNFSL-SKSLPLSFKPI---SSVKTRRISTKTLALQQQQRQH 59
L+ SSTS + K NF + + +P + KP SS+ + +TL+
Sbjct: 7 LASSSTSNPICLLNPGKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSF 66
Query: 60 DVPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+ S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDA+D +
Sbjct: 67 SI--DSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSER 124
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI LF+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN+
Sbjct: 125 DITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNS 184
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
+VMIHQP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P
Sbjct: 185 KVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPW 244
Query: 240 EAVEYGIIDGVID 252
EA EYG+ID VID
Sbjct: 245 EAKEYGLIDAVID 257
>gi|13899067|gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Arabidopsis thaliana]
gi|18377550|gb|AAL66941.1| ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
Length = 309
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 161/253 (63%), Gaps = 6/253 (2%)
Query: 4 LSVSSTSTSHLHFSLYKPPNFSL-SKSLPLSFKPI---SSVKTRRISTKTLALQQQQRQH 59
L+ SSTS + K NF + + +P + KP SS+ + +TL+
Sbjct: 7 LASSSTSNPICLLNPGKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSF 66
Query: 60 DVPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+ S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDA+D +
Sbjct: 67 SI--DSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSER 124
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI LF+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN+
Sbjct: 125 DITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNS 184
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
+VMIHQP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P
Sbjct: 185 KVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPW 244
Query: 240 EAVEYGIIDGVID 252
EA EYG+ID VID
Sbjct: 245 EAKEYGLIDAVID 257
>gi|3599968|gb|AAC35489.1| clp protease [Arabidopsis thaliana]
Length = 310
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 161/253 (63%), Gaps = 6/253 (2%)
Query: 4 LSVSSTSTSHLHFSLYKPPNFSL-SKSLPLSFKPI---SSVKTRRISTKTLALQQQQRQH 59
L+ SSTS + K NF + + +P + KP SS+ + +TL+
Sbjct: 8 LASSSTSNPICLLNPGKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSF 67
Query: 60 DVPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+ S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDA+D +
Sbjct: 68 SI--DSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSER 125
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI LF+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN+
Sbjct: 126 DITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNS 185
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
+VMIHQP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P
Sbjct: 186 KVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPW 245
Query: 240 EAVEYGIIDGVID 252
EA EYG+ID VID
Sbjct: 246 EAKEYGLIDAVID 258
>gi|428201398|ref|YP_007079987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427978830|gb|AFY76430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 272
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG IDD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A AIY
Sbjct: 85 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGFAIY 144
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VR DV T+ G++AS + +L GG KGKR A+P+ R+MIHQP+GGA GQ +++EI
Sbjct: 145 DAMQQVRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARLMIHQPIGGAQGQAVEIEI 204
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QAREI++ K +++ TG+ +E++ D +RD YMS EA EYG+ID VI R ++ P
Sbjct: 205 QAREILYMKQRLNELLAIHTGQPYEKIATDTERDFYMSAQEAQEYGLIDRVISRPTLSDP 264
Query: 259 LVPV 262
+PV
Sbjct: 265 TIPV 268
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 224
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 147/203 (72%), Gaps = 4/203 (1%)
Query: 54 QQQRQHDVPLSSA---PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQL 109
Q + + +P+S+ P + RG A D LL+ERI+FLG +DD VADA+++Q+
Sbjct: 11 QNRWRAAMPVSAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQM 70
Query: 110 LLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGT 169
L L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGT
Sbjct: 71 LFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGT 130
Query: 170 KGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKD 229
KGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI++ K+ +++ TG+ +++ +D
Sbjct: 131 KGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISED 190
Query: 230 IDRDRYMSPIEAVEYGIIDGVID 252
DRD ++SP EAVEYG+ID V+D
Sbjct: 191 TDRDYFLSPAEAVEYGLIDRVVD 213
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
Length = 224
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 146/203 (71%), Gaps = 4/203 (1%)
Query: 54 QQQRQHDVPLSSA---PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQL 109
Q + + ++P+S+ P + RG A D LL+ERI+FLG +DD VADA+++Q+
Sbjct: 11 QNRWRSEMPISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQM 70
Query: 110 LLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGT 169
L L+A+DP KDI+++VNSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGT
Sbjct: 71 LFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGT 130
Query: 170 KGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKD 229
KGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI+ K+ +++ TG+ ++ +D
Sbjct: 131 KGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQPLAKISED 190
Query: 230 IDRDRYMSPIEAVEYGIIDGVID 252
DRD ++SP EAVEYG+ID V+D
Sbjct: 191 TDRDYFLSPAEAVEYGLIDRVVD 213
>gi|116256435|sp|Q3ANI8.2|CLPP1_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 207
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 133/168 (79%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q
Sbjct: 29 LLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQ 88
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 89 VAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 148
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++ K+ +++ TG+ +++ +D DRD ++SP EAVEYG+ID V+D
Sbjct: 149 LYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVVD 196
>gi|6069464|dbj|BAA85451.1| S-locus protein 2 [Brassica rapa]
Length = 311
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 135/188 (71%)
Query: 65 SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 124
S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDAQD +DI LF
Sbjct: 72 SVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLF 131
Query: 125 VNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIH 184
+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN++VMIH
Sbjct: 132 INSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIH 191
Query: 185 QPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
QP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P EA EY
Sbjct: 192 QPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEY 251
Query: 245 GIIDGVID 252
G++D VID
Sbjct: 252 GLVDAVID 259
>gi|15864561|emb|CAC80640.1| ClpP putative protein [Brassica napus]
Length = 313
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 135/188 (71%)
Query: 65 SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 124
S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDAQD +DI LF
Sbjct: 74 SVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLF 133
Query: 125 VNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIH 184
+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN++VMIH
Sbjct: 134 INSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIH 193
Query: 185 QPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
QP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P EA EY
Sbjct: 194 QPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEY 253
Query: 245 GIIDGVID 252
G++D VID
Sbjct: 254 GLVDAVID 261
>gi|416405032|ref|ZP_11687843.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|357261367|gb|EHJ10638.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 262
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 159/233 (68%), Gaps = 5/233 (2%)
Query: 34 FKPI--SSVKTRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERI 90
FKPI + +++R + T++ ++ + P + P + G A D LL+ERI
Sbjct: 27 FKPILKTMIESRSLDY-TISSKRPSEIYAAPENVVPMVVEQSGVGERAFDIYSRLLRERI 85
Query: 91 VFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVS 150
VFLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIYD +Q +R DV
Sbjct: 86 VFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVV 145
Query: 151 TVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDN 210
T+ G++AS + +L GGTKGKR A+P++R+MIHQP+GGA GQ +++EIQA+EI++ K
Sbjct: 146 TICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAKEILYIKKR 205
Query: 211 FTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-PLVPV 262
+++ TG+ F+ + D +RD +MS EAV+YG+ID VI R + P VPV
Sbjct: 206 LNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLIDKVISRSDLSDPTVPV 258
>gi|7657879|emb|CAB89185.1| ClpP [Brassica napus var. napus]
Length = 313
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 135/188 (71%)
Query: 65 SAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 124
S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDAQD +DI LF
Sbjct: 74 SVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLF 133
Query: 125 VNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIH 184
+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN++VMIH
Sbjct: 134 INSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIH 193
Query: 185 QPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
QP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P EA EY
Sbjct: 194 QPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEY 253
Query: 245 GIIDGVID 252
G++D VID
Sbjct: 254 GLVDAVID 261
>gi|428222327|ref|YP_007106497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427995667|gb|AFY74362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 198
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG IDD V++ +++QLL L+A+DP KDI +++NSPGGS++
Sbjct: 11 RGDRAFDIFSRLLRERIVFLGTAIDDNVSNLVVAQLLFLEAEDPEKDIFIYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DVST+ +G++AS + +L GGTKGKR ++P+TR+MIHQP+GGA GQ
Sbjct: 71 AGMAIYDTMQHIRPDVSTICVGLAASMGAFLLAGGTKGKRLSLPHTRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EIQA+EI+++K+ +++ TGRS E++ D DRD +MS +EA YG+ID V+
Sbjct: 131 ATDIEIQAKEILYHKNRLNELLAFHTGRSLEEIGNDTDRDFFMSAVEAQAYGLIDQVV 188
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 134/172 (77%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG+ IDD VA+ +++QLL L+A+DP KDI+L++NSPGGS+SA +AIY
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLAIY 83
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DV+T+ +G +AS +++L GGTKGKRF++PN+R+MIHQP+GGA G DVEI
Sbjct: 84 DTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGAEGPAKDVEI 143
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+E++ K+ I+S TG+ E+++KD DRD +M+P EA+EYG+ID VI
Sbjct: 144 MTKELLRIKNKINEILSFHTGQPIERIEKDTDRDFFMTPEEALEYGLIDKVI 195
>gi|427703523|ref|YP_007046745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
gi|427346691|gb|AFY29404.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
Length = 249
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG IDD VAD++++QLL L+A+DP KDI++++NSPGGS++
Sbjct: 63 RGDRAFDIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKDIQIYINSPGGSVT 122
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AIYD +Q V DV T+ G++AS + +L GG GKR A+PN R+MIHQP+GGA GQ
Sbjct: 123 SGLAIYDTMQQVAPDVVTICYGLAASMGAFLLTGGAPGKRMALPNARIMIHQPLGGAQGQ 182
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+D+EIQAREI+ KD +++ TG+ +++ +D DRD ++SP EAVEYG+ID V+D
Sbjct: 183 AVDIEIQAREILFLKDTLNGLMAEHTGQPLDKIAEDTDRDYFLSPAEAVEYGLIDRVVD- 241
Query: 254 DSIIPLVP 261
D+ P+VP
Sbjct: 242 DAPAPVVP 249
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 239
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 145/206 (70%), Gaps = 2/206 (0%)
Query: 56 QRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
Q++ + S+ P ++ G + D LL+ERI+FLG IDD +AD+I++QLL L+A
Sbjct: 23 QKEEKIYNSAVPMVVESSGMGEKVFDIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEA 82
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
DP KDI +++NSPGGS+ A MAIYD +Q ++ DVST+ G++AS + +L GG KGKR
Sbjct: 83 DDPEKDIYIYINSPGGSVYAGMAIYDTMQQIKPDVSTICYGIAASMGAFLLSGGAKGKRL 142
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+R+MIHQP+GGA GQ D+EIQA+EI++ K+ ++++ TG+ E++ D +RD
Sbjct: 143 GLPNSRIMIHQPLGGAQGQASDIEIQAKEILYIKNKLNQLLADHTGQPLEKISLDTERDF 202
Query: 235 YMSPIEAVEYGIIDGVIDRDSI-IPL 259
YMS EA EYG+ID VI R+ I +PL
Sbjct: 203 YMSSTEAQEYGLIDEVIIREGISLPL 228
>gi|443311871|ref|ZP_21041494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442778107|gb|ELR88377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 219
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 132/177 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS++A MAIY
Sbjct: 32 DIYSRLLRERIVFLGTQVDDAVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L G KGKR ++P+ R+MIHQP+GGA GQ +D+EI
Sbjct: 92 DTIQQIRPDVVTICFGLAASMGAFLLTAGAKGKRMSLPSARIMIHQPLGGAQGQAVDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
QA+EI+++K +++ TG+ E+++ D +RD +MS EA YG+ID VI R +I
Sbjct: 152 QAKEILYHKSRLNELLAHHTGKPLERIEADTERDFFMSAEEAKNYGLIDSVISRQNI 208
>gi|17028170|gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea]
Length = 279
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 136/190 (71%)
Query: 63 LSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
+ S Q+P+ E D +LL++RIVFLG+ +DD AD +ISQLLLLDAQD +DI
Sbjct: 38 VDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDIT 97
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
LF+NSPGGS++A M IYD ++ +ADVSTV LG++AS + +L G+KGKR+ MPN++VM
Sbjct: 98 LFINSPGGSITAGMGIYDAMKQCKADVSTVCLGIAASMGAFLLASGSKGKRYCMPNSKVM 157
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP+G A G+ ++ I+ RE+M++K +I S TG+ +++ D DRD +++P EA
Sbjct: 158 IHQPLGSAGGKATEMSIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAK 217
Query: 243 EYGIIDGVID 252
EYG++D VID
Sbjct: 218 EYGLVDAVID 227
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 133/171 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VADA+++QLL L+A+DP KDI++++NSPGGS++A +AIYD +Q
Sbjct: 58 LLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQ 117
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GGTKGKR A+P+ R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 118 VAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQGQAVDIEIQAKEI 177
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+ KD +++ TG+ E++ +D DRD ++SP EAV+YG+ID V++ +
Sbjct: 178 LFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVDYGLIDRVVNETT 228
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1.1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 207
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 132/168 (78%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI+++VNSPGGS++A +AIYD +Q
Sbjct: 29 LLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQ 88
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 89 VAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEI 148
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ K+ +++ TG+ +++ +D DRD ++SP EAVEYG+ID V+D
Sbjct: 149 LFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVVD 196
>gi|148238406|ref|YP_001223793.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
gi|147846945|emb|CAK22496.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 229
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 145/208 (69%), Gaps = 10/208 (4%)
Query: 55 QQRQHDV-PLSSAPQTPATAM--------RGAEA-DAMGLLLKERIVFLGNNIDDFVADA 104
Q R + P+S PQ + RG A D LL+ERI+FLG +DD VADA
Sbjct: 11 QNRWRGIQPMSVHPQAAPGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADA 70
Query: 105 IISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLI 164
+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +
Sbjct: 71 LVAQMLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFL 130
Query: 165 LGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFE 224
L GGTKGKR A+PN R+MIHQPMGGA GQ +D+EIQA+EI+ K+ +++ TG+ +
Sbjct: 131 LSGGTKGKRLALPNARIMIHQPMGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQPLD 190
Query: 225 QVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++ +D DRD +MSP +AV+YG+ID V+D
Sbjct: 191 KIAEDTDRDNFMSPAQAVDYGLIDRVVD 218
>gi|72383092|ref|YP_292447.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|115311351|sp|Q46ID4.1|CLPP3_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|72002942|gb|AAZ58744.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 194
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 134/167 (80%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +++D VADA+++Q+L L+A DP KDI+L+VNSPGGS++A +AIYD +Q
Sbjct: 22 LLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLAIYDTMQQ 81
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GGTKGKR A+PN+R+MIHQP+GGA GQ +++EIQA+EI
Sbjct: 82 VSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEI 141
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ K+ +++ TG++ +++ +D DRD ++SP EAVEYG+ID V+
Sbjct: 142 LYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVV 188
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
Length = 199
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 132/168 (78%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VADA+++QLL L+A+DP K+I++++NSPGGS++A +AIYD +Q
Sbjct: 21 LLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQIYINSPGGSVTAGLAIYDTMQQ 80
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GGTKGKR A+P+ R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 81 VAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQGQAVDIEIQAQEI 140
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ KD +++ TG+ E++ +D DRD ++SP EAVEYG+ID V+D
Sbjct: 141 LFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVEYGLIDRVVD 188
>gi|296087193|emb|CBI33567.3| unnamed protein product [Vitis vinifera]
Length = 185
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 130/169 (76%)
Query: 84 LLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQ 143
+LL++RIVFLG+ +DD AD +ISQLL LDA+D KDI+LF+NSPGGS++A + IYD ++
Sbjct: 1 MLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIYDAMK 60
Query: 144 LVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQARE 203
L +ADVSTV LG++AS + +L G+KGKRF MPN+RVMIHQP+G A G+ ++ I+ RE
Sbjct: 61 LCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMGIRIRE 120
Query: 204 IMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+M++K +I+S TG+ +Q++ D DRD +M+ EA EYG+ID VID
Sbjct: 121 MMYHKIKLNKILSRITGKPEQQIEADTDRDNFMNAWEAKEYGLIDAVID 169
>gi|88809960|ref|ZP_01125465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
gi|88786150|gb|EAR17312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
Length = 229
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 145/208 (69%), Gaps = 9/208 (4%)
Query: 54 QQQRQHDVPLSSAPQTPATAM--------RGAEA-DAMGLLLKERIVFLGNNIDDFVADA 104
Q + + P+S PQ + RG A D LL+ERI+FLG +DD VADA
Sbjct: 11 QNRWRGTQPMSVHPQAAPGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADA 70
Query: 105 IISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLI 164
+++QLL L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +
Sbjct: 71 LVAQLLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFL 130
Query: 165 LGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFE 224
L GGTKGKR A+PN R+MIHQPMGGA GQ +D+EIQA+EI+ K+ +++ TG+ +
Sbjct: 131 LSGGTKGKRLALPNARIMIHQPMGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQPLD 190
Query: 225 QVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++ +D DRD ++SP EAV+YG+ID V+D
Sbjct: 191 KIAEDTDRDYFLSPSEAVDYGLIDRVVD 218
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 131/172 (76%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG+ IDD+VA+ +I+QLL L+A+DP KD+ L++NSPGGS++A +AIY
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS A+++L G KGKR+A+PN R+MIHQP+GGA G DVEI
Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
RE++ KD RI+S TG+ E+++KD DRD +MS EA EYGI+D V+
Sbjct: 148 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>gi|434391262|ref|YP_007126209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428263103|gb|AFZ29049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 230
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 131/172 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 48 LLRERIIFLGTQVDDTVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQ 107
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV+T+ G++AS + +L G GKR ++PN+R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 108 IRCDVATICFGLAASMGAFLLAAGAHGKRMSLPNSRIMIHQPLGGAQGQAVDIEIQAKEI 167
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K I++ TG+ E+++ D +RD +MS EA YG+ID VI + ++
Sbjct: 168 LYLKRKLNEILAYHTGKPLERIEADTERDFFMSAEEAKNYGLIDQVISKQNL 219
>gi|402814642|ref|ZP_10864236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402508489|gb|EJW19010.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 193
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D VA++II+QLL L A DP KDI
Sbjct: 1 MSYVPVVVEQTNRGERSYDIYSRLLKDRIIFLGTEVNDLVANSIIAQLLFLAADDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSISAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +DN +I++ TG+ E+V++D DRD +MS EA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDNLNKILAERTGQPLERVERDTDRDYFMSAQEA 180
Query: 242 VEYGIIDGVIDRD 254
+YG++D V+ ++
Sbjct: 181 FDYGLVDKVLGKE 193
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSFIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKR+A+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI++ TG+ E+++KD DRD +M+ EA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILAERTGQPLERIEKDTDRDYFMTAEEA 180
Query: 242 VEYGIIDGVIDR 253
EYG++D V+++
Sbjct: 181 KEYGLVDQVLEK 192
>gi|124026830|ref|YP_001015945.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
gi|123961898|gb|ABM76681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 218
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 134/167 (80%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +++D VADA+++Q+L L+A DP KDI+L+VNSPGGS++A +AIYD +Q
Sbjct: 46 LLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLAIYDTMQQ 105
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GGTKGKR A+PN+R+MIHQP+GGA GQ +++EIQA+EI
Sbjct: 106 VSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEI 165
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ K+ +++ TG++ +++ +D DRD ++SP EAVEYG+ID V+
Sbjct: 166 LYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVV 212
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 129/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ IDD VA+ +I+QLL L+A+DP KDI L++NSPGGS++A MAIY
Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DVST+ +G++AS + +L G KGKR+A+PN +MIHQP GG GQ D+EI
Sbjct: 80 DTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AR IM+ K++ +I++ TG+ E++QKD DRD +M+ EA EYGIID VI
Sbjct: 140 HARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVI 191
>gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002]
gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 197
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 131/167 (78%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERIVFLG IDD VAD++++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 26 LLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQLYINSPGGSVYAGMAIYDTMQQ 85
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R +V T+ G++AS + +L GGTKGKR A+P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 86 IRPNVVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIEIQAKEI 145
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ KD +I+ TG+ F++V +D +RD YMS EA +YG+ID VI
Sbjct: 146 LYIKDKLNTLIADHTGQPFDKVAEDTERDFYMSAEEACQYGLIDQVI 192
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451816220|ref|YP_007452672.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993.1|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|407960292|dbj|BAM53532.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451782189|gb|AGF53158.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 98
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GG KGKR A+P++R+MIHQP+GGA GQ +++EI
Sbjct: 99 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 158
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QAREI++ KD ++ TG+ E++Q+D +RD +MS EA EYG+ID VI R ++ P
Sbjct: 159 QAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNLPDP 218
Query: 259 LVPV 262
PV
Sbjct: 219 TTPV 222
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 131/172 (76%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG+ IDD VA+ +I+QLL L+A+DP KD+ L++NSPGGS++A +AIY
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 85
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS A+++L GTKGKR+A+PN R+MIHQP+GGA G DVEI
Sbjct: 86 DTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARIMIHQPLGGAEGPAKDVEI 145
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
RE++ KD RI+S TG+ E+++KD DRD +MS EA EYGI+D V+
Sbjct: 146 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 197
>gi|383323811|ref|YP_005384665.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326980|ref|YP_005387834.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492864|ref|YP_005410541.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384438132|ref|YP_005652857.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339275165|dbj|BAK51652.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359273131|dbj|BAL30650.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359276301|dbj|BAL33819.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359279471|dbj|BAL36988.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
Length = 201
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIYD +Q
Sbjct: 19 LLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQ 78
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GG KGKR A+P++R+MIHQP+GGA GQ +++EIQAREI
Sbjct: 79 IRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAREI 138
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-PLVPV 262
++ KD ++ TG+ E++Q+D +RD +MS EA EYG+ID VI R ++ P PV
Sbjct: 139 LYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNLPDPTTPV 197
>gi|22298052|ref|NP_681299.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222557|sp|Q8DLI2.1|CLPP1_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|22294230|dbj|BAC08061.1| ATP-dependent Clp protease proteolytic subunit 1
[Thermosynechococcus elongatus BP-1]
Length = 229
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 149/225 (66%), Gaps = 23/225 (10%)
Query: 56 QRQHDVPLSSAPQTPATAM----------------RGAEA-DAMGLLLKERIVFLGNN-- 96
Q ++D PLS+ ++PA + RG A D LL+ERI+FLG
Sbjct: 3 QSRYDHPLSAILRSPALNLPPTHANIVPMVVEQSGRGERAFDIYSRLLRERIIFLGGGAG 62
Query: 97 ----IDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTV 152
IDD VAD+I++QLL LDA+DP KDI L++NSPGGS++A MAIYD ++ +R DV T+
Sbjct: 63 DRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTL 122
Query: 153 ALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFT 212
G++AS + +L GGT GKR A+PN R+MIHQP+GGA GQ +D+EIQAREI+++K
Sbjct: 123 CFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLN 182
Query: 213 RIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
++S TG+ E+++ D +RD +MS EA YG+ID V+ R +++
Sbjct: 183 ELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQVVTRQTLL 227
>gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|67460514|sp|Q7UZK7.1|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 215
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 141/199 (70%), Gaps = 1/199 (0%)
Query: 57 RQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
R D S+ P + RG A D LL+ERI+FLG I+D V+D++++QLL L+A+
Sbjct: 16 RDIDKSRSAVPTVVEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAE 75
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
DP KDI++++NSPGGS++A +AIYD +Q + DV T+ G++AS + +L GG KGKR A
Sbjct: 76 DPHKDIQIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLA 135
Query: 176 MPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRY 235
+PN+R+MIHQP+GGA GQ +++EIQA+EI+ K +++ T +S E++ +D +RD +
Sbjct: 136 LPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYF 195
Query: 236 MSPIEAVEYGIIDGVIDRD 254
+SP EAVEYG+ID VI D
Sbjct: 196 LSPEEAVEYGLIDKVIKND 214
>gi|167746334|ref|ZP_02418461.1| hypothetical protein ANACAC_01043 [Anaerostipes caccae DSM 14662]
gi|317470744|ref|ZP_07930129.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
gi|167654327|gb|EDR98456.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerostipes caccae DSM 14662]
gi|316901879|gb|EFV23808.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
Length = 196
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG + D A I+SQLL L+A+DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDVSASLIVSQLLFLEAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD + ++ DVST+ +GM+AS S +L GG KGKR A+PN +
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMNFIKCDVSTICMGMAASMGSFLLSGGAKGKRMALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQPMGGA GQ +++I A I+ K RI+S TG+ E +++D DRD +++ EA
Sbjct: 121 MIHQPMGGAQGQATEIQIAAEHILQTKKRLNRILSENTGKPLEVIERDTDRDNWLTAEEA 180
Query: 242 VEYGIIDGVIDR 253
VEYG+ID V D+
Sbjct: 181 VEYGLIDAVFDK 192
>gi|124021784|ref|YP_001016091.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
gi|123962070|gb|ABM76826.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 224
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++
Sbjct: 35 RGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVT 94
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQP+GGA GQ
Sbjct: 95 AGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQ 154
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+D+EIQA+EI+ K+ +++ TG+ ++ +D DRD ++SP +AVEYG+ID V+D
Sbjct: 155 AVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYGLIDRVVD 213
>gi|123967079|ref|YP_001012160.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
gi|123201445|gb|ABM73053.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 204
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 139/192 (72%), Gaps = 1/192 (0%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S+ P + RG A D LL+ERI+FLG I+D V D++++QLL L+A+DP KDI+
Sbjct: 12 SAIPTVVEQSGRGERAFDIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQ 71
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
+++NSPGGS++A +AIYD +Q + DV T+ G++AS + +L GG KGKR A+PN+R+M
Sbjct: 72 IYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIM 131
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP+GGA GQ +++EIQA+EI+ K ++S TG+S E++ +D +RD ++SP EAV
Sbjct: 132 IHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLSEHTGQSLEKINEDTERDYFLSPEEAV 191
Query: 243 EYGIIDGVIDRD 254
+YG+ID VI D
Sbjct: 192 QYGLIDKVIKND 203
>gi|374321531|ref|YP_005074660.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357200540|gb|AET58437.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 198
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+ LG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSYVPMVVEQSNRGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L+VNSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 HLYVNSPGGSITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI++ TG+ E+++KD DRD +MS +A
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDA 180
Query: 242 VEYGIIDGVI 251
EYGIID V+
Sbjct: 181 KEYGIIDKVL 190
>gi|33864600|ref|NP_896159.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
gi|67460511|sp|Q7UA36.1|CLPP1_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33632123|emb|CAE06579.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
Length = 224
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 146/203 (71%), Gaps = 4/203 (1%)
Query: 54 QQQRQHDVPLSS---APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQL 109
Q + + ++P+S+ P + RG A D LL+ERI+FLG +DD VADA+++Q+
Sbjct: 11 QNRWRAEMPISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQM 70
Query: 110 LLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGT 169
L L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GG
Sbjct: 71 LFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGC 130
Query: 170 KGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKD 229
KGKR A+PN R+MIHQP+GGA GQ +D+EIQA+EI+ K+ +++ TG+ +++ +D
Sbjct: 131 KGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAED 190
Query: 230 IDRDRYMSPIEAVEYGIIDGVID 252
DRD ++SP EAV+YG+ID V+D
Sbjct: 191 TDRDYFLSPAEAVQYGLIDRVVD 213
>gi|337744565|ref|YP_004638727.1| protein ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|379718194|ref|YP_005310325.1| protein ClpP1 [Paenibacillus mucilaginosus 3016]
gi|386720758|ref|YP_006187083.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
gi|336295754|gb|AEI38857.1| ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|378566866|gb|AFC27176.1| ClpP1 [Paenibacillus mucilaginosus 3016]
gi|384087882|gb|AFH59318.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
Length = 193
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG+ I+D VA++II+QLL L A DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGSGINDVVANSIIAQLLFLAASDPDKDIHLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ MAIYD +Q ++ DVST+ +GM+AS + +L G GKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 SGMAIYDTMQFIKPDVSTICVGMAASMGAFLLAAGAPGKRFALPNSEVMIHQPLGGAEGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI+A+ I+ +D I+S TG+SFE+++KD DRD +MS EA YG+ID VI++
Sbjct: 133 ASDIEIRAKRILKMRDKLNTILSERTGQSFERIEKDTDRDNFMSAEEARAYGLIDKVIEK 192
>gi|33862335|ref|NP_893895.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|67460519|sp|Q7V992.1|CLPP1_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33640448|emb|CAE20237.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 224
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 141/195 (72%), Gaps = 4/195 (2%)
Query: 62 PLSS---APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDP 117
P+SS P + RG A D LL+ERI+FLG +DD VADA+++Q+L L+A+DP
Sbjct: 19 PVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDP 78
Query: 118 TKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMP 177
KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+P
Sbjct: 79 EKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALP 138
Query: 178 NTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMS 237
N R+MIHQP+GGA GQ +D+EIQA+EI+ K+ +++ TG+ ++ +D DRD ++S
Sbjct: 139 NARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLS 198
Query: 238 PIEAVEYGIIDGVID 252
P +AVEYG+ID V+D
Sbjct: 199 PAKAVEYGLIDRVVD 213
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG I+D VA+ +++QLL L A+DP KDI L++NSPGGS++
Sbjct: 15 RGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSIT 74
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ DVST+ +GM+AS + +L GTKGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 75 AGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQ 134
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EI A+ I+ +D+ I++ TG+ E++QKD DRD ++S EAVEYG+ID VI
Sbjct: 135 ASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLIDKVI 192
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 134/172 (77%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG+ IDD VA+ I++QLL L+A+DP KDI+L++NSPGGS+SA +AIY
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLAIY 83
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ DV+T+ +G +AS +++L GGTKGKRF++PN+R+MIHQP+GGA G DVEI
Sbjct: 84 DTMQYVKCDVTTICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGAEGPAKDVEI 143
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+E++ K+ I+S TG+ E++++D DRD +M+P +A+EYG+ID VI
Sbjct: 144 MTKELLRIKNKINEILSLHTGQPIERIERDTDRDFFMTPEDALEYGLIDKVI 195
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 131/174 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+G I+D +A+++I+Q+L L+++DP KDI L++NSPGG + A +AIY
Sbjct: 19 DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R+DVST+ +GM+AS +++L G +GKRF +PN+R+M+HQPMGGA GQ DVEI
Sbjct: 79 DTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREIM K+ +I++ TG+ EQ+ KD DRD +MS EA +YG+ID V+ R
Sbjct: 139 HAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKR 192
>gi|148241165|ref|YP_001226322.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
gi|147849475|emb|CAK26969.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 207
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 136/186 (73%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LL+ERI+FLG IDD +ADA+++QLL L+A+DP K+I+++V
Sbjct: 20 PTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDAIADAVVAQLLYLEAEDPEKEIQIYV 79
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN R+MIHQ
Sbjct: 80 NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 139
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ +D+EIQA+EI++ K+ +++ TG+ +V +D DRD ++SP EAV YG
Sbjct: 140 PLGGAQGQAVDIEIQAKEILYLKETLNGLMASHTGQDLAKVSEDTDRDYFLSPDEAVAYG 199
Query: 246 IIDGVI 251
+ID V+
Sbjct: 200 LIDRVV 205
>gi|282856773|ref|ZP_06266034.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pyramidobacter piscolens W5455]
gi|282585396|gb|EFB90703.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pyramidobacter piscolens W5455]
Length = 192
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 132/169 (78%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIVFLG+ I+D VA+A+++QLL L+++ P +DI +++NSPGGS+SA +AIYD +Q
Sbjct: 23 LLKDRIVFLGDEINDDVANAVVAQLLFLESESPERDISIYINSPGGSVSAGLAIYDTMQF 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ DVST+ +GM+AS A+++L G+ GKR A+PN+R+MIHQP+GGA GQ D+EIQAREI
Sbjct: 83 VKCDVSTIVVGMAASMAAVLLSAGSAGKRIALPNSRIMIHQPLGGAQGQASDIEIQAREI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K+ I+ TG+S +V+ D DRD YM+ EA+ YGI+D VID+
Sbjct: 143 IKTKETLNNILVKHTGQSMRKVKGDTDRDFYMTAQEALAYGIVDKVIDK 191
>gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 214
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+++ P + RG A D LL+ERI+FLG I+D V+D++++QLL L+A+DP KDI
Sbjct: 23 IAAVPTVIEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDI 82
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++++NSPGGS++A MAIYD +Q + DV T+ G++AS + +L GG KGKR A+PN+R+
Sbjct: 83 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ +++EIQA+EI+ K +++ TG+ E++ +D +RD ++SP EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 202
Query: 242 VEYGIIDGVIDR 253
VEYG+ID VI +
Sbjct: 203 VEYGLIDKVIKK 214
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 198
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSFIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKR+ +PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI+S TG+ E+++KD DRD +M+ EA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILSDRTGQPLERIEKDTDRDYFMTADEA 180
Query: 242 VEYGIIDGVID 252
EYG+ID V++
Sbjct: 181 KEYGLIDQVLE 191
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG I+D VA+ +++QLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ DVST+ +GM+AS + +L GTKGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EI A+ I+ +D+ I++ TG+ E++QKD DRD ++S EAVEYG+ID VI
Sbjct: 133 ASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLIDKVI 190
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG I+D VA+ +++QLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ DVST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EI A+ I+ +D+ I++ TG+ E++QKD DRD ++S EAVEYG+ID VI
Sbjct: 133 ASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLIDKVI 190
>gi|78780133|ref|YP_398245.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|115311352|sp|Q317Y6.1|CLPP4_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|78713632|gb|ABB50809.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 219
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+ + P + RG A D LL+ERI+FLG+ I+D V+D++++QLL L+A+DP KDI
Sbjct: 28 IGAVPTVIEQSGRGERAFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDI 87
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++++NSPGGS++A MAIYD +Q + DV T+ G++AS + +L GG KGKR A+PN+R+
Sbjct: 88 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 147
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ +++EIQA+EI+ K +++ TG+ E++ +D +RD ++SP EA
Sbjct: 148 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 207
Query: 242 VEYGIIDGVIDR 253
VEYG+ID VI +
Sbjct: 208 VEYGLIDKVIKK 219
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG I+D VA+ +++QLL L A+DP KDI L++NSPGGS++
Sbjct: 15 RGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSIT 74
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ DVST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 75 AGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQ 134
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EI A+ I+ +D+ I++ TG+ E++QKD DRD ++S EAVEYG+ID VI
Sbjct: 135 ASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLIDKVI 192
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSFIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKR+ +PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI+S TG+ E+++KD DRD +M+ EA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMTADEA 180
Query: 242 VEYGIIDGVID 252
EYG+ID V++
Sbjct: 181 KEYGLIDQVLE 191
>gi|452820068|gb|EME27116.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 293
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 133/188 (70%)
Query: 70 PATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPG 129
P M + D L K+RI+ LG +DD VA+A+++Q+L L +DP+KDI L++NSPG
Sbjct: 97 PTVYMGDTQMDIYSRLAKDRILLLGRAVDDEVANALVAQMLFLANEDPSKDITLYINSPG 156
Query: 130 GSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGG 189
GS+SA +A+YD +Q + DVSTV G +AS A+ +LG GTKGKR ++PN R+MIHQP+GG
Sbjct: 157 GSVSAGLAVYDTMQFIPCDVSTVCFGTAASMAAFLLGAGTKGKRKSLPNARIMIHQPLGG 216
Query: 190 ASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDG 249
A GQ D+EIQAREI+ K ++ +TG+ E++++D DRD +M+P EA+EYG+ID
Sbjct: 217 AQGQAADIEIQAREILFIKSLLNTYMADYTGKPLEKIEQDTDRDFFMTPEEALEYGMIDE 276
Query: 250 VIDRDSII 257
VI ++
Sbjct: 277 VIQTKKVL 284
>gi|390456222|ref|ZP_10241750.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
Length = 198
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+ LG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSYVPMVVEQSNRGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI++ TG+ E+++KD DRD +MS +A
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDA 180
Query: 242 VEYGIIDGVI 251
EYGIID V+
Sbjct: 181 KEYGIIDKVL 190
>gi|375306341|ref|ZP_09771639.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
gi|375081594|gb|EHS59804.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
Length = 198
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+ LG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSYVPMVVEQSNRGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI++ TG+ E+++KD DRD +MS +A
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDA 180
Query: 242 VEYGIIDGVI 251
EYGIID V+
Sbjct: 181 KEYGIIDKVL 190
>gi|254525962|ref|ZP_05138014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|221537386|gb|EEE39839.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 214
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+++ P + RG A D LL+ERI+FLG I+D V+D++++QLL L+A+DP KDI
Sbjct: 23 VTAVPTVIEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDI 82
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++++NSPGGS++A MAIYD +Q + DV T+ G++AS + +L GG KGKR A+PN+R+
Sbjct: 83 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ +++EIQA+EI+ K +++ TG+ E++ +D +RD ++SP EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 202
Query: 242 VEYGIIDGVIDR 253
VEYG+ID VI +
Sbjct: 203 VEYGLIDKVIKK 214
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386038858|ref|YP_005957812.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343094896|emb|CCC83105.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 198
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+ LG++++D VA++II+Q+L L A+DP KDI
Sbjct: 1 MSYVPMVVEQSNRGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D RI++ TG+ E+++KD DRD +MS +A
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDA 180
Query: 242 VEYGIIDGVI 251
EYGIID V+
Sbjct: 181 KEYGIIDKVL 190
>gi|157414262|ref|YP_001485128.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|157388837|gb|ABV51542.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
Length = 214
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+++ P + RG A D LL+ERI+FLG I+D V+D++++QLL L+A+DP KDI
Sbjct: 23 VAAVPTVIEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDI 82
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++++NSPGGS++A MAIYD +Q + DV T+ G++AS + +L GG KGKR A+PN+R+
Sbjct: 83 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ +++EIQA+EI+ K +++ TG+ E++ +D +RD ++SP EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 202
Query: 242 VEYGIIDGVIDR 253
VEYG+ID VI +
Sbjct: 203 VEYGLIDKVIKK 214
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG+ IDD VA+ +I+QLL L+A+DP KD+ L++NSPGGS++A +AIY
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 85
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS A+++L G KGKR+A+PN R+MIHQP+GGA G DVEI
Sbjct: 86 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 145
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
RE++ KD RI+S TG+ E+++KD DRD +MS EA EYGI+D V+
Sbjct: 146 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 197
>gi|407010349|gb|EKE25269.1| hypothetical protein ACD_5C00228G0012 [uncultured bacterium]
Length = 194
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+AII+QLL L+ Q+P +DI +++NSPGG +S+ +AIYD +Q
Sbjct: 27 LLKDRIIFLGTPIDDGVANAIIAQLLFLEQQNPKEDITIYINSPGGVVSSALAIYDTMQY 86
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DV T+ +G++AS A+LILG G KGKRF +PN VMIHQ MGGASGQ DV+I AR I
Sbjct: 87 VRPDVRTICVGLAASGAALILGAGKKGKRFVLPNAEVMIHQVMGGASGQASDVDIHARHI 146
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ KDN RI++ TG+ +V+KD DRD +MS EAV YGI+D I+
Sbjct: 147 LGTKDNLNRILAKHTGQKLAKVEKDTDRDYFMSADEAVAYGIVDKKIE 194
>gi|428223754|ref|YP_007107851.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427983655|gb|AFY64799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 229
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
P + P + RG A D LL+ERI+FLG +DD VAD+I++QLL L+A DP KD
Sbjct: 23 PSNIVPMVVEQSGRGERAFDIYSRLLRERIIFLGTPVDDAVADSIVAQLLFLEADDPEKD 82
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
I++++NSPGGS++A MAIYD +Q VR DV T+ G++AS + +L G +GKR ++PN+R
Sbjct: 83 IQIYINSPGGSVTAGMAIYDTMQQVRPDVVTICFGLAASMGAFLLASGARGKRLSLPNSR 142
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
+MIHQP+GGA GQ +D+EIQAREI+++K ++S TG+ ++++ D +RD +MS E
Sbjct: 143 IMIHQPLGGAQGQAVDIEIQAREILYHKRRLNELLSHHTGQPLDRLEVDTERDFFMSAEE 202
Query: 241 AVEYGIIDGVIDRDSI 256
A YG+ID VI R ++
Sbjct: 203 ACNYGLIDQVISRQTL 218
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 136/206 (66%), Gaps = 9/206 (4%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++QKD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVIDRDSIIPLVPVPEKVKPGFD 271
+ID V +VP + P F+
Sbjct: 185 LIDEV--------MVPETKWSHPQFE 202
>gi|159904323|ref|YP_001551667.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
gi|159889499|gb|ABX09713.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 200
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LL+ERI+FLG +++D VADA+++Q+L L+A+DP KDI+L++
Sbjct: 11 PTVVEQSGRGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEAEDPEKDIQLYI 70
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR ++PN+R+MIHQ
Sbjct: 71 NSPGGSVTAGLAIYDTMQQVTPDVVTICYGLAASMGAFLLSGGTKGKRVSLPNSRIMIHQ 130
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ +++EIQA+EI+ K+ ++S TG+ +++ +D DRD ++SP EAVEYG
Sbjct: 131 PLGGAQGQAVEIEIQAKEILFLKETLNGLLSEHTGQPIDKIAEDTDRDHFLSPQEAVEYG 190
Query: 246 IIDGVID 252
+ID VI+
Sbjct: 191 LIDKVIN 197
>gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
Length = 193
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG A D LLK+RI+F+G+ IDD VA+ +I+QLL L+++DP KDI
Sbjct: 1 MNLVPMVVEQTNRGERAYDIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++VNSPGGS+ A +AIYD +Q ++ DVST+ +G++AS +++L G GKRF++PN+R+
Sbjct: 61 NIYVNSPGGSVYAGLAIYDTMQYIKPDVSTICVGLAASMGAVLLAAGADGKRFSLPNSRI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
M+HQP+GGA GQ +D+EI A+EI+ ++ I+SG TG+ EQ+ +D DRD +MS +A
Sbjct: 121 MVHQPLGGAQGQAVDIEIHAKEILRIRERLNEILSGHTGKPVEQIARDTDRDYFMSAEQA 180
Query: 242 VEYGIIDGVIDR 253
EYG+IDGV+++
Sbjct: 181 KEYGLIDGVLEK 192
>gi|354567676|ref|ZP_08986844.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542134|gb|EHC11598.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 231
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 140/201 (69%), Gaps = 1/201 (0%)
Query: 57 RQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
R + P + P + G A D LL+ERI+FLG IDD VA++I++QLL LDA+
Sbjct: 20 RAQNGPSNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAE 79
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
DP KDI+L++NSPGGS+ A MAIYD +Q +R DV T+ G++AS + +L GT GKR +
Sbjct: 80 DPEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLAAGTAGKRMS 139
Query: 176 MPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRY 235
+P++R+MIHQP+GGA GQ +D+EIQAREI++ K ++++ TG+ E+++ D DRD +
Sbjct: 140 LPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKGKLNQLLAHHTGQPLERIEADTDRDFF 199
Query: 236 MSPIEAVEYGIIDGVIDRDSI 256
MS EA YG+ID VI R ++
Sbjct: 200 MSAEEAKNYGLIDQVITRQNL 220
>gi|410726144|ref|ZP_11364388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
gi|410601390|gb|EKQ55905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
Length = 198
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG + D +A+ I++QL+ L+A+DP KDI
Sbjct: 1 MSLIPYVIEQTSRGERSYDIYSKLLKDRIIFLGEEVSDSIANLIVAQLIFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A AIYD + ++ DVST+ +GM+AS + +L GG GKRFA+ N V
Sbjct: 61 HLYINSPGGSVTAGFAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGANGKRFALSNAEV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D++I A I+ NK N +I++ TG+S EQ++ D DRD +MS EA
Sbjct: 121 MIHQPSGGAKGQASDIKIAAEHILKNKRNLNKILAENTGKSIEQIEVDTDRDNFMSADEA 180
Query: 242 VEYGIIDGVIDRDSII 257
EYG+IDGV++R++ I
Sbjct: 181 KEYGLIDGVMNRENKI 196
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ ++D+V++ I++Q+L L+AQDP KDI L++NSPGGS++A +AIY
Sbjct: 20 DIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYLYINSPGGSITAGLAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS +++L G KGKRFA+PN+R+MIHQP GGA G D+EI
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNSRIMIHQPWGGAQGTAKDIEI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI+ K +I+S TG+ Q++KD DRD +MS EA EYG+ID VI
Sbjct: 140 QAQEILRMKKMLNKILSEHTGKDVSQIEKDADRDFFMSAEEAKEYGLIDKVI 191
>gi|126659496|ref|ZP_01730629.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126619230|gb|EAZ89966.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 201
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL LDA+DP KDI++++NSPGGS+ A +AIY
Sbjct: 14 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYINSPGGSVYAGLAIY 73
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GGTKGKR A+P++R+MIHQP+GGA GQ +++EI
Sbjct: 74 DTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 133
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR-DSIIP 258
QA+EI++ K +++ TG+ ++++ D +RD +MS EAV+YG+ID VI R D P
Sbjct: 134 QAKEILYIKKRLNDMLAEHTGQPYDKIATDTERDFFMSAQEAVDYGLIDKVISRPDLSDP 193
Query: 259 LVPV 262
VPV
Sbjct: 194 TVPV 197
>gi|357013904|ref|ZP_09078903.1| ClpP1 [Paenibacillus elgii B69]
Length = 193
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG+ I+D VA++II+Q+L L A DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGSPINDVVANSIIAQMLFLAATDPDKDISVYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 SGMAIYDTMQFIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAEGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI+A+ I+ +D I++ TG+SFE+++KD DRD +MS +A YG+ID VI+R
Sbjct: 133 ASDIEIRAKRILKMRDKLNTILAERTGQSFERIEKDTDRDNFMSAEDAKNYGLIDKVIER 192
>gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 228
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG IDD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 42 DIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GGTKGKR A+P+ R+MIHQP+GGA GQ ++++I
Sbjct: 102 DTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSARIMIHQPIGGAQGQAVEIDI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QA+EI++ K +++ TG+ +E++ +D +RD YMS +A +YG+ID VI R + P
Sbjct: 162 QAKEILYIKQRLNSLLAEHTGQPYERIAEDTERDFYMSVHDAKDYGLIDQVISRSELPDP 221
Query: 259 LVPV 262
+PV
Sbjct: 222 TIPV 225
>gi|162451419|ref|YP_001613786.1| endopeptidase Clp [Sorangium cellulosum So ce56]
gi|161162001|emb|CAN93306.1| Endopeptidase Clp [Sorangium cellulosum So ce56]
Length = 214
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 147/210 (70%), Gaps = 4/210 (1%)
Query: 42 TRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGA-EADAMGLLLKERIVFLGNNIDDF 100
TRR+ T+T A++ +R+ L P RG E + LLK+RIVF+G IDDF
Sbjct: 2 TRRVETRTQAIEFLEREKAYIL---PTVTEVTHRGEREWNIFSRLLKDRIVFIGTEIDDF 58
Query: 101 VADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAST 160
VA+A+I+Q L L+++DP K+I++++NSPGG +++ +A+YD +Q VR VST+ +G +AS
Sbjct: 59 VANAVIAQFLFLESEDPEKEIQVYINSPGGVVTSGLAMYDTMQYVRCPVSTMCIGQAASM 118
Query: 161 ASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTG 220
+++LG G KG+RFA+P+ R+MIHQP+GGA GQ D+EIQAREI K+ I+ TG
Sbjct: 119 GAVLLGAGRKGRRFALPHARMMIHQPLGGARGQATDIEIQAREIKKIKETLIDILVDATG 178
Query: 221 RSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++ +++ KDI+RD Y+S +A EYG+ID V
Sbjct: 179 KNRDELAKDIERDFYLSATQAKEYGLIDEV 208
>gi|297531315|ref|YP_003672590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
gi|297254567|gb|ADI28013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
Length = 196
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIVFLG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D RI+S TG+ E +++D DRD +M+ +A+EYGIID V+ R
Sbjct: 133 ATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIIDRVLTR 192
>gi|387928693|ref|ZP_10131371.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus PB1]
gi|387588279|gb|EIJ80601.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus PB1]
Length = 201
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG IDD+VA++I++QLL L+A++P KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGTPIDDYVANSIVAQLLFLEAENPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DV T+ +GM+AS + +L GTKGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D +I+S TG+ E + KD DRD +M+ +A+EYG++D +I R
Sbjct: 133 ATEIEIAAKRILFLRDKLNKILSERTGQPVEVIAKDTDRDNFMTAQQALEYGLVDHIISR 192
Query: 254 DSI 256
+S+
Sbjct: 193 NSL 195
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++Q+D DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|87301613|ref|ZP_01084453.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
gi|87283830|gb|EAQ75784.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
Length = 213
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG IDD VAD++++QLL L+A+DP KDI+++VNSPGGS++
Sbjct: 30 RGERAFDIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKDIQIYVNSPGGSVT 89
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+P+ R+MIHQP+GGA GQ
Sbjct: 90 AGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRMALPSARIMIHQPLGGAQGQ 149
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+D+EIQA+EI+ KD +++ TG+ ++ +D DRD ++SP EAV YG+ID V+D
Sbjct: 150 AVDIEIQAKEILFLKDTLNGLMAEHTGQPLAKIAEDTDRDYFLSPPEAVSYGLIDRVVD 208
>gi|299821953|ref|ZP_07053841.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi DSM
20601]
gi|299817618|gb|EFI84854.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi DSM
20601]
Length = 203
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 136/195 (69%), Gaps = 1/195 (0%)
Query: 58 QHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQD 116
+ ++ ++ P RG A D LLK+RI+ LG+ IDD VA++I++QLL LD+QD
Sbjct: 2 RRNITMNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLDSQD 61
Query: 117 PTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAM 176
P KDI L++NSPGGS+SA MAIYD + LV+ADV T+ +GM+AS S +L G GKRFA+
Sbjct: 62 PDKDIYLYINSPGGSISAGMAIYDTMNLVKADVQTIGMGMAASMGSFLLAAGADGKRFAL 121
Query: 177 PNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYM 236
PN+ +MIHQP+GGA GQ ++EI AR I+ K+ RI+S TG+ E + +D DRD +M
Sbjct: 122 PNSEIMIHQPLGGAQGQATEIEIAARHILKIKERMNRILSEKTGQPIEVIARDTDRDNFM 181
Query: 237 SPIEAVEYGIIDGVI 251
+ EA EYG+ID +I
Sbjct: 182 TADEAKEYGLIDDII 196
>gi|406981668|gb|EKE03092.1| hypothetical protein ACD_20C00261G0002 [uncultured bacterium]
Length = 203
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 132/174 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG +DD VA+ I++QLLLLD+++P KDI L++NSPGGS++A +AIY
Sbjct: 19 DIFSRLLRERIIFLGTPVDDMVANLIVAQLLLLDSENPEKDIMLYINSPGGSVTAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +RADV+T+ LG +AS + +L GT GKR A+P++RV+IHQP+GGA GQ D+EI
Sbjct: 79 DTMQHIRADVNTICLGQAASMGAFLLAAGTPGKRMALPHSRVLIHQPLGGAQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QA EI K +++ TG+SF++++KD DRD M+P EA+EYG++D VI +
Sbjct: 139 QAAEIGRIKRTLNELLAKHTGQSFKKIEKDTDRDYIMTPQEALEYGMVDKVITK 192
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit [Staphylococcus
aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++QKD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|218247705|ref|YP_002373076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060958|ref|YP_003138846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168183|gb|ACK66920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256591124|gb|ACV02011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 229
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 136/184 (73%), Gaps = 4/184 (2%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV+T+ G++AS + +L GG GKR A+P++R+MIHQP+GGA GQ +++EI
Sbjct: 102 DTMQQIRPDVATICFGLAASMGAFLLCGGAPGKRMALPSSRIMIHQPLGGAQGQAVEIEI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR----DS 255
QA+EI++ K +++ TG+ F+ + +D +RD +MS EA EYG+ID VI R DS
Sbjct: 162 QAKEILYIKRRLNEMLASHTGQPFDTIAEDTERDFFMSAQEAKEYGLIDKVISRPHLSDS 221
Query: 256 IIPL 259
+P+
Sbjct: 222 TVPV 225
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 7 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 66
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 67 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 126
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++QKD DRD +++ EA EYG
Sbjct: 127 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 186
Query: 246 IIDGVI 251
+ID V+
Sbjct: 187 LIDEVM 192
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 136/206 (66%), Gaps = 9/206 (4%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+A+ S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++QKD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVIDRDSIIPLVPVPEKVKPGFD 271
+ID V +VP + P F+
Sbjct: 185 LIDEV--------MVPETKWSHPQFE 202
>gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354552381|ref|ZP_08971689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353555703|gb|EHC25091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 229
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GG KGKR A+P++R+MIHQP+GGA GQ +++EI
Sbjct: 102 DTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR-DSIIP 258
QA+EI++ K +++ TG+ E + D +RD +MS EAV+YG+ID VI R D P
Sbjct: 162 QAKEILYIKKRLNDMLAEHTGQPLETIAADTERDFFMSAQEAVDYGLIDQVISRPDLSDP 221
Query: 259 LVPV 262
VPV
Sbjct: 222 TVPV 225
>gi|56421597|ref|YP_148915.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
kaustophilus HTA426]
gi|261420500|ref|YP_003254182.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
Y412MC61]
gi|319768169|ref|YP_004133670.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|375010197|ref|YP_004983830.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448239320|ref|YP_007403378.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
gi|67460172|sp|Q5KVD9.1|CLPP_GEOKA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56381439|dbj|BAD77347.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Geobacillus kaustophilus HTA426]
gi|261376957|gb|ACX79700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC61]
gi|317113035|gb|ADU95527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|359289046|gb|AEV20730.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445208162|gb|AGE23627.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
Length = 196
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIVFLG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D RI+S TG+ E +++D DRD +M+ +A+EYGIID V+ R
Sbjct: 133 ATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIIDRVLTR 192
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG+ ++D VA++II+Q+L L A DP KDI
Sbjct: 1 MSYVPIVVEQTNRGERSYDIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G+KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D I++ TG+ E++++D DRD +MS EA
Sbjct: 121 MIHQPLGGAEGQASDIEIRARRILKLRDKLNHILAERTGQPLERIERDTDRDYFMSAEEA 180
Query: 242 VEYGIIDGVIDR 253
+EYG++D V+ +
Sbjct: 181 LEYGLVDKVLHK 192
>gi|393776900|ref|ZP_10365194.1| ClpP protein [Ralstonia sp. PBA]
gi|392716257|gb|EIZ03837.1| ClpP protein [Ralstonia sp. PBA]
Length = 217
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 145/212 (68%), Gaps = 7/212 (3%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFV 101
R ++T+ AL Q L P + RG A D LLKER+VFL ++D
Sbjct: 9 RMVTTQASALDTQ------GLGLVPMVVEQSGRGERAFDIYSRLLKERVVFLVGEVNDQT 62
Query: 102 ADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTA 161
A+ +++QLL L++++P KDI L++NSPGGS+SA +AIYD +Q ++ DVST+ +GM+AS
Sbjct: 63 ANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMG 122
Query: 162 SLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGR 221
+ +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ ++ +I+S TG+
Sbjct: 123 AFLLAAGAKGKRFALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNQILSDVTGQ 182
Query: 222 SFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
E++ +D DRD +MS +AVEYG+ID I +
Sbjct: 183 PVEKIARDTDRDNFMSADQAVEYGLIDKAIGK 214
>gi|443324676|ref|ZP_21053413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442795717|gb|ELS05067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 219
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 132/174 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG IDD VAD++++QLL L+A+DP KDI+L++NSPGGS+ + MAIY
Sbjct: 42 DIYSRLLRERIIFLGTAIDDKVADSVVAQLLYLEAEDPEKDIQLYINSPGGSVYSGMAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DV T+ G++AS + +L GGTKGKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 102 DTMQQIQPDVVTICYGIAASMGAFLLSGGTKGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QA+EI++ K +I+G T + F+++ D +RD YMS EA EYG+ID VI +
Sbjct: 162 QAKEILYIKKRLNELIAGHTEQDFDKISLDTERDFYMSSEEAKEYGLIDSVITK 215
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 196
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG IDD VA+ +++QLL L A+D KDI
Sbjct: 1 MSLVPMVIEQSSRGERAYDIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
RL++NSPGGS++A MAIYD +Q ++ DVSTV +GM+AS + +L GTKGKRFA+PN+ +
Sbjct: 61 RLYINSPGGSITAGMAIYDTMQYIKPDVSTVCIGMAASMGAFLLAAGTKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D++I A I+ KD RI+S TG+ E++++D DRD +M EA
Sbjct: 121 MIHQPLGGVRGQAADIKIHADWILRTKDKINRILSERTGQPLEKIERDTDRDNFMDAEEA 180
Query: 242 VEYGIIDGVI 251
YG+ID VI
Sbjct: 181 KAYGLIDEVI 190
>gi|406992634|gb|EKE11960.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 201
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 127/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+AII+QLL L+ Q+P +DI++++NSPGGS+S+ +AIYD +Q
Sbjct: 31 LLKDRIIFLGTGIDDGVANAIIAQLLFLEQQNPKEDIKIYINSPGGSVSSALAIYDTMQY 90
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ +G++AS +L+LG GTKGKR+ +PN VMIHQ MGGA GQ D+ IQA+ I
Sbjct: 91 IRCDVQTICIGIAASAGALLLGAGTKGKRYILPNAEVMIHQVMGGAQGQASDINIQAQHI 150
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ KD +I++ TG+ +V+ D DRD +MS EAV+YGI+D +I
Sbjct: 151 LKTKDVLNKILAKHTGQKIAKVETDTDRDYFMSSSEAVKYGIVDKII 197
>gi|415886844|ref|ZP_11548587.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus MGA3]
gi|387585495|gb|EIJ77820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus MGA3]
Length = 201
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG IDD+VA++I++QLL L+A++P KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGTPIDDYVANSIVAQLLFLEAENPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DV T+ +GM+AS + +L GTKGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D +I+S TG+ E + KD DRD +M+ +A+EYG++D +I R
Sbjct: 133 ATEIEIAAKRILFLRDKLNQILSERTGQPVEVIAKDTDRDNFMTAQQALEYGLVDHIITR 192
Query: 254 DSI 256
+S+
Sbjct: 193 NSL 195
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 127/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ I++QLL L+A++P KDI L++NSPGGS++A MAIYD +Q
Sbjct: 34 LLKERVIFLTGQVEDHMANLIVAQLLFLEAENPEKDIHLYINSPGGSVTAGMAIYDTMQF 93
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADVST+ +G +AS + +L GG KGKR +PN RVMIHQP+GG GQ D+EI AREI
Sbjct: 94 IKADVSTLCIGQAASMGAFLLAGGAKGKRHCLPNARVMIHQPLGGFQGQASDIEIHAREI 153
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ KD R+++ TG+S E + +D DRDR+M+ +A+EYG++D V+
Sbjct: 154 LFIKDRLNRLLADHTGQSLETIAQDTDRDRFMTAEQAMEYGLVDSVL 200
>gi|313884960|ref|ZP_07818712.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eremococcus coleocola ACS-139-V-Col8]
gi|312619651|gb|EFR31088.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eremococcus coleocola ACS-139-V-Col8]
Length = 200
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L ++D +A+++I+QLL LDAQDP KDI L++
Sbjct: 5 PTVIENTSRGERAYDIYSRLLKDRIIMLSGEVNDAMANSVIAQLLFLDAQDPDKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MA+YD +Q + ADV T+ +GM+AS S++L GTKGKR+A+PN VMIHQ
Sbjct: 65 NSPGGSVTAGMAMYDTMQFINADVQTIVIGMAASMGSVLLAAGTKGKRWALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A+ I+ +D +I+S TG+ E +QKD DRD +M+ +A++YG
Sbjct: 125 PLGGAQGQATEIEIAAKHILLTRDRLNKILSDATGQDLEVIQKDTDRDNFMTAQQALDYG 184
Query: 246 IIDGVIDR 253
+IDG+++
Sbjct: 185 LIDGIMEN 192
>gi|381211603|ref|ZP_09918674.1| ATP-dependent Clp protease proteolytic subunit [Lentibacillus sp.
Grbi]
Length = 197
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I++QLL L+A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSGIDDNVANSIVAQLLFLEAEDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ +VST+ GM+AS + +L G KGKR+A+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQFIKPNVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI AR I+ K+ +I+S TG+ E V++D DRD + S E+VEYG+ID +++R
Sbjct: 133 ATDIEIHARRIIQMKEKMNKILSERTGQPLEVVERDTDRDNFKSAEESVEYGLIDKILER 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 134/178 (75%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG++++D VA++II+Q+L L A+DP KDI L++NSPGGS++
Sbjct: 8 RGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPGGSIT 67
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAI+D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 68 AGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQ 127
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EI+AR I+ +D RI++ TG+ E+++KD DRD +MS +A EYGIID V+
Sbjct: 128 ATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 185
>gi|331003803|ref|ZP_08327295.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
gi|330411995|gb|EGG91392.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
Length = 193
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG ++D A +++Q+L L+++DPTKDI
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+ A MAIYD +Q V+ DVST+ +GM+AS + +L GGTKGKR+A+PN +
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFLLAGGTKGKRYALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++ I A +I+ K+ +I++ T R E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTKEKMNKILAENTNRPIEVIERDTERDNYMSAKEA 180
Query: 242 VEYGIIDGVIDR 253
++YGIID VI+
Sbjct: 181 LDYGIIDKVIEH 192
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 133/190 (70%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG+S E++Q+D DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVIDRDS 255
+ID V++ +S
Sbjct: 185 LIDEVMEPES 194
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
Length = 200
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLKERI+FLG ++D VA +++QLL L+A+DP KDI ++NSPGGS++
Sbjct: 13 RGERAFDIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDITFYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DV+T+ +G +AS +L+L G GKRFA+PN+R+MIHQPMGG GQ
Sbjct: 73 AGMAIYDTMQYIRCDVATLCMGQAASMGALLLASGAAGKRFALPNSRIMIHQPMGGYQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D++I AREI+ + + I++ TG+S +++Q D +RD +MS EA EYGIID V+
Sbjct: 133 ATDIDIHAREILRMRHDLNTILARHTGKSMKKIQADTERDNFMSATEACEYGIIDKVL 190
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 136/188 (72%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERI+FLG +DD + + I++Q+L L+A+DP KDI L++
Sbjct: 3 PTVIETSGRGERAFDIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + I+D + VR DVST+ LG++AS + +L G KGKR ++P++R+MIHQ
Sbjct: 63 NSPGGSVSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K +S TG+ E++++D +RD +MSP E++EYG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKQQLNHYLSEHTGQPLERIEEDTERDFFMSPQESMEYG 182
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 183 LIDRVIER 190
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG A D LLKERI+F+G +IDD VA I+Q+L L+++DP KDI
Sbjct: 1 MSLVPIVVEQTNRGERAYDIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
RL++NSPGGS++A +AIYD +Q ++ DVST+ +G++AS +++L GT+GKR+A+PN+R+
Sbjct: 61 RLYINSPGGSVTAGLAIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG G+ +D+E A+EI+ ++ I++ T +S E+++KD DRD +MS EA
Sbjct: 121 MIHQPWGGVQGKAVDIETHAKEILRLRELLNEILANHTKQSIEKIEKDTDRDYFMSSKEA 180
Query: 242 VEYGIIDGVIDR 253
+EYG+ID VI +
Sbjct: 181 LEYGLIDEVIHK 192
>gi|340751561|ref|ZP_08688371.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420526|gb|EEO35573.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 191
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 130/169 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+AI++QLL L+A+DP KDI +++NSPGG ++A MAIYD +
Sbjct: 23 LLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYINSPGGVVTAGMAIYDTMNY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV TV +G +AS +L+L G KGKRFA+ ++R+MIHQP+GGA GQ D+EIQA+EI
Sbjct: 83 IKPDVQTVCIGQAASMGALLLSAGAKGKRFALEHSRIMIHQPLGGARGQATDIEIQAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K+ ++I++ +G+S E++ +D +RD YMS EAVEYG+ID V +
Sbjct: 143 LRMKEMLSQILANVSGKSVEEILRDTERDNYMSAQEAVEYGLIDQVFKK 191
>gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 231
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 136/186 (73%), Gaps = 4/186 (2%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +D+ +A+ I +Q+L LDA+DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 49 LLRERIIFLGTQVDENLANTITAQMLFLDAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQ 108
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DV T+ G++AS + +L GG KGKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 109 VRPDVVTICYGLAASMGAFLLSGGAKGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEI 168
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPE 264
+++K +++ TG+ E+++ D +RD +MS EA YG+ID VI R ++ PVP
Sbjct: 169 LYHKRKLNELLAEHTGQPLEKIEVDTERDFFMSAEEAKNYGLIDQVITRQNL----PVPG 224
Query: 265 KVKPGF 270
+ P
Sbjct: 225 ESVPAM 230
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++Q+D DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|254446451|ref|ZP_05059927.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198260759|gb|EDY85067.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 182
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 129/166 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIVF+G I+D +A+AII+QLL L +DP KDI +++NSPGGS+++ MAIYD +
Sbjct: 7 LLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGSVTSGMAIYDTMNF 66
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+ +VST +GM+AS +++L GGTKGKR+A+PN+RVMIHQP GGA GQ D+ IQA+EI
Sbjct: 67 LSCEVSTWCIGMAASMGTILLAGGTKGKRYALPNSRVMIHQPSGGAGGQASDISIQAKEI 126
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
+ ++ ++++ TG+S E++QKD DRD +M+ EA+EYG+ID V
Sbjct: 127 IRWRETLNKVLAEKTGQSVERIQKDSDRDYWMTSQEALEYGVIDKV 172
>gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|21759070|sp|Q8YQX8.1|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 232
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA+ I++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K ++++ TG+ E+++ D DRD +MS EA YG+ID VI R ++
Sbjct: 170 LYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVISRQNL 221
>gi|428307443|ref|YP_007144268.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428248978|gb|AFZ14758.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 228
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 134/172 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+F+G +DD VAD++++QLL L+++DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 46 LLRERIIFMGTPVDDTVADSLVAQLLFLESEDPEKDIQLYINSPGGSVTAGMAIYDTMQQ 105
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GG KGKR A+P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 106 IRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQAVDIEIQAKEI 165
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+++K +++ TG+ +++ D +RD +MS EA +YG+ID VIDR ++
Sbjct: 166 LYHKRVLNELLAEHTGQPIDKITADTERDFFMSSAEAKDYGLIDQVIDRHNL 217
>gi|456063263|ref|YP_007502233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
gi|455440560|gb|AGG33498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
Length = 209
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LL+ER+VFL ++D A+ +I+QLL L++++P K+I
Sbjct: 16 LGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDKEI 75
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+RV
Sbjct: 76 SLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSRV 135
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ +I++ TG+S E + KD DRD +MS +A
Sbjct: 136 MIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETIAKDTDRDNFMSADQA 195
Query: 242 VEYGIIDGVIDR 253
EYG+ID VID+
Sbjct: 196 QEYGLIDKVIDK 207
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD + ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIHHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI+S TG+S E++Q+D DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|365156025|ref|ZP_09352363.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus smithii
7_3_47FAA]
gi|363627734|gb|EHL78586.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus smithii
7_3_47FAA]
Length = 197
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 133/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I++QLL L+A++P KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDTVANSIVAQLLFLEAENPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DV T+ +GM+AS + +L GTKGKR+A+PN VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ KD +I+S TG+ E ++KD DRD +M+ A EYG+ID +I R
Sbjct: 133 ATEIEIAAKRILFLKDKLNKILSERTGQPLEVIEKDTDRDNFMTAQRAKEYGLIDHIISR 192
Query: 254 DSI 256
+ I
Sbjct: 193 NDI 195
>gi|406670364|ref|ZP_11077616.1| ATP-dependent Clp protease proteolytic subunit [Facklamia ignava
CCUG 37419]
gi|405579671|gb|EKB53766.1| ATP-dependent Clp protease proteolytic subunit [Facklamia ignava
CCUG 37419]
Length = 201
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L IDD +A+++I+QLL LDAQDP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLSGGIDDQLANSVIAQLLFLDAQDPEKDIYLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD ++ + ADV T+ +GM+AS AS++L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMRFINADVQTIVIGMAASMASVLLAAGEKGKRWALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ +I+S TG+ E +++D DRD + EA+EYG+IDG++
Sbjct: 133 ATEIEIAARHILKTKERLNQILSDLTGQPLEVIEQDTDRDNFKDADEALEYGLIDGIM 190
>gi|115311350|sp|Q3M726.2|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 214
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA+ I++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 32 LLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQ 91
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 92 IRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 151
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K ++++ TG+ E+++ D DRD +MS EA YG+ID VI R ++
Sbjct: 152 LYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVISRQNL 203
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ I+S TG+S E++QKD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNHILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|158336585|ref|YP_001517759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acaryochloris
marina MBIC11017]
gi|359461615|ref|ZP_09250178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acaryochloris
sp. CCMEE 5410]
gi|158306826|gb|ABW28443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acaryochloris
marina MBIC11017]
Length = 238
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 142/203 (69%), Gaps = 8/203 (3%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNN-------IDDFVADAIISQLLLLD 113
P + P + RG A D LL+ERIVFLG IDD VADAI++QLL L+
Sbjct: 25 PRNIVPMVVEQSGRGERAFDIYSRLLRERIVFLGGGGSANGGGIDDAVADAIVAQLLFLE 84
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
+++P +DI L++NSPGGS++A MAIYD +Q +R DV T+ G++AS + +L GT GKR
Sbjct: 85 SENPEQDIYLYINSPGGSITAGMAIYDTIQHIRPDVCTICFGLAASMGAFLLCAGTAGKR 144
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
A+PN R+MIHQP+GGA GQ +D+EI+A+EI++ K+N +++G TG+ FE+++ D +RD
Sbjct: 145 MALPNARIMIHQPLGGAQGQAVDIEIRAKEILYLKNNLNHLMAGHTGQPFERIEADTERD 204
Query: 234 RYMSPIEAVEYGIIDGVIDRDSI 256
+MS EA +YG+ID V+ R ++
Sbjct: 205 FFMSAEEAQKYGLIDQVLTRQNL 227
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG+S E++Q+D DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|427734237|ref|YP_007053781.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427369278|gb|AFY53234.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 234
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 131/172 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA+++++QLL LDA D KDI+++VNSPGGS++A MAIYD +Q
Sbjct: 52 LLRERIIFLGTPIDDAVANSLVAQLLFLDADDSEKDIQIYVNSPGGSVTAGMAIYDTIQQ 111
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS +L+L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 112 IRPDVVTICFGLAASMGALLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAVDIEIQAKEI 171
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+++K I++ TG+ E+++ D +RD +MS EA YG+ID VI R ++
Sbjct: 172 LYHKSKLNEILASHTGQPLEKIEADTERDFFMSAEEAKNYGLIDQVISRQNL 223
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 133/174 (76%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+ I+D +A+ II+QLL L+++DP KD+ L++NSPGGS+SA +AIY
Sbjct: 19 DIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDVHLYINSPGGSVSAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DVST+ +GM+AS AS++L GTKGKR+A+P++RVMIHQP+GGA GQ D+EI
Sbjct: 79 DTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRVMIHQPLGGAQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+ ++ +I++ TG++ EQ++ D +RD +M+ EA YG+ID V+ +
Sbjct: 139 HAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEAANYGLIDQVVHQ 192
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|418415755|ref|ZP_12988958.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418636869|ref|ZP_13199207.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|374840430|gb|EHS03924.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|410873613|gb|EKS21547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 195
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG+S EQ+QKD DRD +++ EA YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +DD +++ I++QLL L+A DP KDI L++NSPGGS++
Sbjct: 11 RGERAFDIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DVST+ +G++AS + +L GG KGKR ++P+TR+MIHQP+GGA GQ
Sbjct: 71 AGMAIYDTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EIQA+EI+++K +++ TG+ +++ +D DRD +MSP EA YG+ID V+
Sbjct: 131 ATDIEIQAKEILYHKSRLNELMAFHTGQPIDRIAEDTDRDFFMSPYEAKNYGLIDEVV 188
>gi|138896648|ref|YP_001127101.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196249350|ref|ZP_03148048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
gi|166201825|sp|A4ISQ2.1|CLPP_GEOTN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134268161|gb|ABO68356.1| ATP-dependent Clp protease [Geobacillus thermodenitrificans NG80-2]
gi|196211107|gb|EDY05868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
Length = 196
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D RI++ TG+ E +++D DRD +M+ +A EYGIID V+ R
Sbjct: 133 ATEIEIAAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEYGIIDRVLTR 192
>gi|430751620|ref|YP_007214528.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430735585|gb|AGA59530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 195
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P + RG A D LLK+RI+FLG I+D VA+++I+Q+L L A DP KDI
Sbjct: 3 MNFVPMVIEQSSRGERAYDIYSRLLKDRIIFLGTPINDVVANSVIAQMLFLAADDPEKDI 62
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+++ MAIYD +Q ++ DVST+ +GM+AS + +L G GKR+A+PN+ V
Sbjct: 63 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAPGKRYALPNSEV 122
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D +I+S TG+ E+++KD DRD +MS EA
Sbjct: 123 MIHQPLGGAEGQASDIEIRARRILKMRDKLNKILSERTGQPLERIEKDTDRDYFMSAEEA 182
Query: 242 VEYGIIDGVIDR 253
YG++D VI+R
Sbjct: 183 KNYGLVDKVIER 194
>gi|315650622|ref|ZP_07903682.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487119|gb|EFU77441.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 193
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG ++D A +++Q+L L+++DPTKDI
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+ A MAIYD +Q V+ DVST+ +GM+AS A+ +L GGTKGKR+A+PN +
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++ I A +I+ ++ +I++ T + E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTNQPIEVIERDTERDNYMSAKEA 180
Query: 242 VEYGIIDGVIDR 253
++YGIID VI+
Sbjct: 181 LDYGIIDKVIEH 192
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 140/206 (67%), Gaps = 1/206 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RIV LG IDD VA+AI++QLL L+++DP K
Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A +AIYD +Q V+A VST+ +G +AS +++L G KGKR+++P++
Sbjct: 61 DINLYINSPGGSVTAGLAIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GGA GQ D+EIQAREI+ K +I TG++ E+V+KD DRD +M
Sbjct: 121 RIMIHQPLGGARGQATDIEIQAREILRMKAKLNELIVKHTGQTIERVEKDTDRDYFMGAA 180
Query: 240 EAVEYGIIDGVIDRDSIIPLVPVPEK 265
EA YGIID + D ++ + P +K
Sbjct: 181 EAKAYGIIDSIQDPRKVVGVKPEEKK 206
>gi|381184071|ref|ZP_09892741.1| ATP-dependent Clp protease proteolytic subunit [Listeriaceae
bacterium TTU M1-001]
gi|380316031|gb|EIA19480.1| ATP-dependent Clp protease proteolytic subunit [Listeriaceae
bacterium TTU M1-001]
Length = 197
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V++DV T+ +GM+AS S +L G GKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKSDVQTIGMGMAASMGSFLLAAGADGKRFALPNSEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ KD RI+S TG+ E + +D DRD +M EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKDRMNRILSEKTGQPLEVIARDTDRDNFMDAQEAKDYGLIDDII 190
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 139/193 (72%), Gaps = 3/193 (1%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RI++LG ID +A+ I+ QLL LD++DP KDI L++NSPGGS+S
Sbjct: 11 RGERAFDIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPGGSVS 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M IYD ++ VR DV T+ +G++AS + +L GGTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI++ K ++ TG+S E++ +D +RD +MS EA+EYGIID V +R
Sbjct: 131 ATDIEIQAKEILYLKKYLNECLAEHTGQSIEKITEDTERDFFMSATEAMEYGIIDQVYNR 190
Query: 254 D--SIIPLVPVPE 264
+ + P+ P+ E
Sbjct: 191 NPSNSQPISPIKE 203
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 193
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FL + ++D A +++QLL L+A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDIHLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAKGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ K+ +I+S TG+ E++Q+D +RD +MS EA EYG+ID VI++
Sbjct: 133 ATDIEIHAKWILKIKERLNKILSERTGQPIEKIQEDTERDNFMSAQEAKEYGLIDEVIEK 192
>gi|428222892|ref|YP_007107062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427996232|gb|AFY74927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 214
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + +G A D LL+ERI+FLG ++D VA ++SQLL L+A+DP KDI +++
Sbjct: 24 PMVVEQSGKGERAFDIFSRLLRERIIFLGTEVNDSVASVMMSQLLFLEAEDPQKDIYVYI 83
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+++ MAIYD +Q VR DVST+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 84 NSPGGSVTSGMAIYDTMQHVRPDVSTICMGLAASMGAFLLSAGAKGKRLSLPNSRIMIHQ 143
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ +D+EIQA+EI+++K ++++ TG+ +++++D +RD +MSP EA YG
Sbjct: 144 PLGGARGQAVDIEIQAKEILYHKRTLNKLLAEHTGQPLDKIEQDTERDFFMSPAEAKNYG 203
Query: 246 IIDGVIDR 253
+ID V+ +
Sbjct: 204 LIDQVLTK 211
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L GTKGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG++ E +QKD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQNIETIQKDTDRDNFLTADEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDHVM 190
>gi|220934115|ref|YP_002513014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995425|gb|ACL72027.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 216
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P RG A D LLKER++F ++D++A+ I++QLL L++++P KDI
Sbjct: 17 LNLVPMVVEQTARGERAYDIYSRLLKERVIFAVGPVEDYMANVIVAQLLFLESENPDKDI 76
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG+++A MAIYD +Q ++ DVST+ +G +AS +++L GG KGKRF +P++RV
Sbjct: 77 SLYINSPGGAVTAGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFCLPHSRV 136
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D++I AREI+ + RI++ TG+S EQ+++D +RDR+++P+EA
Sbjct: 137 MIHQPLGGFQGQATDIDIHAREILKVRAELNRILAHHTGQSIEQIEQDTERDRFLNPVEA 196
Query: 242 VEYGIIDGVI 251
EYG+ID V+
Sbjct: 197 AEYGLIDQVL 206
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ +I++ TG+S E++QKD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDNVM 190
>gi|225028671|ref|ZP_03717863.1| hypothetical protein EUBHAL_02950 [Eubacterium hallii DSM 3353]
gi|224953981|gb|EEG35190.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium hallii DSM 3353]
Length = 194
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 125/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG ++D A I+SQLL L+++DP KDI L++ SPGGS++A MAIYD +Q
Sbjct: 24 LLKERIIFLGEEVNDTTASLIVSQLLFLESEDPEKDISLYIMSPGGSVTAGMAIYDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ DVST+ +GM+AS + +L GG KGKR A+PN+ +MIHQP GGA GQ ++EI A I
Sbjct: 84 VKCDVSTICMGMAASMGAFLLAGGAKGKRLALPNSEIMIHQPSGGAQGQATEIEIVAEHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+H K+ RI++ TG+ +E++ +D +RD YM+ +A YG+ID V+++
Sbjct: 144 LHTKEKLNRILAENTGQPYEKIVQDTERDNYMTAEQAKAYGLIDAVVEK 192
>gi|419718353|ref|ZP_14245675.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
gi|383305484|gb|EIC96847.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
Length = 193
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG ++D A +++Q+L L+++DPTKDI
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+ A MAIYD +Q V+ DVST+ +GM+AS A+ +L GGTKGKR+A+PN +
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++ I A +I+ ++ +I++ T + E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTNQPIEVIERDTERDNYMSAKEA 180
Query: 242 VEYGIIDGVIDR 253
+ YGIID VI+
Sbjct: 181 LSYGIIDKVIEH 192
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A+ I+ ++ +I+S TG+ E+++KD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAAKHILRTRERLNKILSELTGQPIEKIEKDTDRDNFLTAQEAKEYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG+ ++D VA++II+Q+L L A DP KDI
Sbjct: 1 MSYVPIVVEQTNRGERSYDIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D I++ TG+ +++++D DRD +MS EA
Sbjct: 121 MIHQPLGGAEGQASDIEIRARRILKMRDKLNHILAERTGQPLDRIERDTDRDYFMSAEEA 180
Query: 242 VEYGIIDGVIDR 253
+EYG++D V+ +
Sbjct: 181 LEYGLVDKVLHK 192
>gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 229
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL LDA+DP KDI+L++NSPGGS++A MAIY
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VR DV T+ G++AS + ++ G GKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 102 DTMQQVRPDVVTICYGLAASMGAFLMAAGAAGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 259
QA+EI+++K +++ TG+ E+++ D +RD +MS EA +YG++D VI + ++
Sbjct: 162 QAKEILYHKRKLNELLAHHTGQPLERIEADTERDFFMSAAEAKDYGLVDQVILKQNL--- 218
Query: 260 VPVP-EKVKP 268
P P E V P
Sbjct: 219 -PAPGENVTP 227
>gi|239618479|ref|YP_002941801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
gi|239507310|gb|ACR80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
Length = 206
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 133/173 (76%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL ERI+FLG +DD +++ +++QLL L++QDP KDI +++NSPGGS+++ +AIY
Sbjct: 24 DIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQDPDKDISIYINSPGGSVTSGLAIY 83
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS A++IL GG+KGKRFA+P++R+MIHQP GGA G D+EI
Sbjct: 84 DTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFALPHSRIMIHQPWGGAEGTAKDIEI 143
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ RE++ +D I+S T + E++++D DRD YMSP EAV+YG++D VI+
Sbjct: 144 RTRELLFIRDQINEILSHHTNQPKEKIEEDTDRDFYMSPAEAVKYGLVDKVIE 196
>gi|167628597|ref|YP_001679096.1| ATP-dependent Clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
gi|167591337|gb|ABZ83085.1| ATP-dependent clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
Length = 199
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA+ II+QLL L+A+DP KDI L++NSPGG+++
Sbjct: 14 RGERAYDIYSRLLKDRIIILGSAIDDNVANLIIAQLLFLEAEDPDKDIHLYINSPGGAIT 73
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ AIYD +QL+R DVST+ +GM+AS + +L G KGKR+A PN +MIHQP+GG GQ
Sbjct: 74 SGFAIYDTMQLIRCDVSTICVGMAASMGAFLLAAGAKGKRYASPNAEIMIHQPLGGVKGQ 133
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++EI AR I+ +D +I++ TG+ E++++D DRD +MS EA YGIIDGV++
Sbjct: 134 ATEIEIHARHILKTRDRLNKILADRTGQPLERIERDTDRDYFMSAEEAKAYGIIDGVME 192
>gi|302671762|ref|YP_003831722.1| ATP-dependent Clp protease proteolytic subunit ClpP [Butyrivibrio
proteoclasticus B316]
gi|302396235|gb|ADL35140.1| ATP-dependent Clp protease proteolytic subunit ClpP [Butyrivibrio
proteoclasticus B316]
Length = 201
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 123/168 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERIVFLG ++ A I++QLL L+A+DP KDI +++NSPGG +S+ MAIYD +
Sbjct: 24 LLKERIVFLGEEVNAASASTIVAQLLFLEAEDPNKDIHMYINSPGGEISSGMAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L GG KGKR A+PN VMIHQP+GG GQ ++EI A+ I
Sbjct: 84 IKCDVSTICIGMAASMGAFLLAGGAKGKRMALPNAEVMIHQPLGGTQGQATEIEIAAKHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ K+ R+++ TG+S+EQV D +RD ++S EA++YG+ID +I+
Sbjct: 144 LKTKEKMNRMLAANTGKSYEQVAADTERDNWLSAQEALDYGLIDSIIE 191
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384134931|ref|YP_005517645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289016|gb|AEJ43126.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 192
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 129/169 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+++QLL L A DP KDI++++NSPGGS+SA +AIYD +Q
Sbjct: 24 LLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGLAIYDTMQH 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS A+++L G KGKR+A+PN+ VMIHQP+GGA GQ D+EI AR I
Sbjct: 84 IKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEVMIHQPLGGARGQASDIEIHARHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ RI++ TG+ E+V +D DRD +MS EA YG+ID VI R
Sbjct: 144 LKTRERLNRILAERTGQPLERVAQDTDRDNFMSAEEAKAYGLIDEVIYR 192
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG IDD VA+ II+Q+L L+A+DP KDI L++NSPGGS++A +AI+
Sbjct: 23 DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPGGSITAGLAIF 82
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ V+ DVST+ +GM+AS + +L G K KRFA PN+ +MIHQPMGGA GQ DVEI
Sbjct: 83 DTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEIMIHQPMGGAQGQATDVEI 142
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AR I+ +D RI++ TG+S E++ +D DRD +M EA EYGIID VI
Sbjct: 143 HARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAEEAKEYGIIDEVI 194
>gi|451948362|ref|YP_007468957.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
gi|451907710|gb|AGF79304.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
Length = 200
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 132/174 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG ++ D V +I++QLL L+A+DP KDI ++NSPGGS++A +AIY
Sbjct: 19 DIYSRLLRERIVFLGTSVGDDVTSSIVAQLLFLEAEDPDKDITFYINSPGGSVTAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ D++T+ +G +AS +L+L GT GKR+A+PN+R+MIHQPMGG GQ +++I
Sbjct: 79 DTMQYVKCDIATLCMGQAASMGALLLAAGTAGKRYALPNSRIMIHQPMGGYQGQASEIDI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+EI+ +D+ +I++ TG + +++QKD DRD +MSP+EA +YGIID V+ +
Sbjct: 139 HAQEILRMRDDLNKILAYHTGHTVKKLQKDTDRDNFMSPLEAQKYGIIDEVLSK 192
>gi|153813468|ref|ZP_01966136.1| hypothetical protein RUMOBE_03888 [Ruminococcus obeum ATCC 29174]
gi|149830412|gb|EDM85504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus obeum ATCC 29174]
Length = 193
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D A I++QLL L+A+DP+KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPSKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A MAIYD ++ ++ DVST+ LGM+AS + +L GGTKGKRFA+P++ +
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMKYIKCDVSTICLGMAASMGAFLLAGGTKGKRFALPHSTI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I K I++ TG+ +E V+KD DRD YM+ EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEA 180
Query: 242 VEYGIIDGVIDR 253
YG+IDGV++
Sbjct: 181 KAYGLIDGVVEH 192
>gi|427720043|ref|YP_007068037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427352479|gb|AFY35203.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 232
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTMQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L G GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPDVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K +++S TG+S E+++ D +RD +MS EA YG+ID VI R +I
Sbjct: 170 LYIKAKLNQLMSQHTGQSLEKIEADTERDFFMSAEEAKNYGLIDQVISRQNI 221
>gi|385784973|ref|YP_005761146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis N920143]
gi|339895229|emb|CCB54551.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus lugdunensis N920143]
Length = 195
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDFEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG+S EQ+QKD DRD +++ EA YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 209
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LL+ER+VFL ++D A+ +I+QLL L++++P KDI
Sbjct: 16 LGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDKDI 75
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+RV
Sbjct: 76 SLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSRV 135
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ +I++ TG+S + + KD DRD +MS +A
Sbjct: 136 MIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIDTIAKDTDRDNFMSAEQA 195
Query: 242 VEYGIIDGVIDR 253
EYG+ID VI++
Sbjct: 196 REYGLIDKVIEK 207
>gi|402312968|ref|ZP_10831891.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnospiraceae bacterium ICM7]
gi|404484025|ref|ZP_11019239.1| ATP-dependent Clp protease proteolytic subunit [Clostridiales
bacterium OBRC5-5]
gi|400367544|gb|EJP20560.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnospiraceae bacterium ICM7]
gi|404342705|gb|EJZ69075.1| ATP-dependent Clp protease proteolytic subunit [Clostridiales
bacterium OBRC5-5]
Length = 193
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG ++D A +++Q+L L+++DPTKDI
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+ A MAIYD +Q V+ DVST+ +GM+AS + +L GGTKGKR+A+PN +
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFLLAGGTKGKRYALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D++I A +I+ K +I++ T + E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAQGQASDIKIVAEQILKTKQKLNKILAENTNQPIEVIERDTERDNYMSAEEA 180
Query: 242 VEYGIIDGVIDR 253
+ YGIID VI+
Sbjct: 181 LSYGIIDKVIEH 192
>gi|372270957|ref|ZP_09507005.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Marinobacterium stanieri S30]
Length = 211
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D +A+ I++QLL L+A++P KDI L++
Sbjct: 19 PMVVEQSSRGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLEAENPDKDIHLYI 78
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ DVST+ +G +AS + +L GG KGKRFA+PN RVMIHQ
Sbjct: 79 NSPGGSVTAGMAIYDTMQFIKPDVSTMCIGQAASMGAFLLAGGAKGKRFALPNARVMIHQ 138
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI +EI+ ++ R+++ TG+ FE V +D DRD +M P A +YG
Sbjct: 139 PLGGYQGQATDIEIHTKEILSIREKLNRLLAEHTGQDFETVARDTDRDNFMDPQTAADYG 198
Query: 246 IIDGVIDR 253
+ID V+DR
Sbjct: 199 LIDEVLDR 206
>gi|323484460|ref|ZP_08089826.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323692476|ref|ZP_08106710.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|355628696|ref|ZP_09049918.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_3_54FAA]
gi|323402238|gb|EGA94570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323503473|gb|EGB19301.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|354819586|gb|EHF04027.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_3_54FAA]
Length = 193
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG + D LLKERI+FLG + D A I+SQLL L+++DP KDI
Sbjct: 1 MSLVPYVIESTSRGERSYDIFSRLLKERIIFLGEEVTDTSAGLIVSQLLFLESEDPNKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AIYD + ++ DVST+ GM+AS + +L GG KGKRFA+PN V
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMNYIKCDVSTICFGMAASMGAFLLAGGAKGKRFALPNAEV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A +I+ K I++ TG+ +E +++D DRD YM+ EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVAEKILQTKKKLNEILAANTGQPYEVIERDTDRDNYMTAQEA 180
Query: 242 VEYGIIDGVI 251
+EYG+ID VI
Sbjct: 181 MEYGLIDRVI 190
>gi|293392545|ref|ZP_06636865.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
gi|291424947|gb|EFE98156.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
Length = 207
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 136/202 (67%), Gaps = 1/202 (0%)
Query: 55 QQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+Q Q ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+
Sbjct: 6 EQDQFAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A+ P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S S +L GTKGKR
Sbjct: 66 AESPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAGTKGKR 125
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
F +PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG+S EQ+ +D +RD
Sbjct: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQSLEQIDRDTERD 185
Query: 234 RYMSPIEAVEYGIIDGVIDRDS 255
R+M+ E+VEYG++DG++ S
Sbjct: 186 RFMTAEESVEYGLVDGILTHRS 207
>gi|456014672|gb|EMF48274.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
halocryophilus Or1]
Length = 233
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 132/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+R++ LG+ IDD VA++I++QLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DV T+ +GM+AS + +L GTKGKR A+PN VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+H ++ +I+S TG+ + + KD DRD +M+ A+EYG+ID VI R
Sbjct: 133 ATEIEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERALEYGLIDQVITR 192
Query: 254 DSI 256
+
Sbjct: 193 SKL 195
>gi|421501785|ref|ZP_15948742.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina DLHK]
gi|400347528|gb|EJO95881.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina DLHK]
Length = 213
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ADVST +G + S + +L GG KGKRF +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI+ ++ +++ TG+S E +++D +RD +MS AVEYG
Sbjct: 141 PLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSAPRAVEYG 200
Query: 246 IIDGVIDR 253
I+D V ++
Sbjct: 201 IVDAVHEK 208
>gi|443476633|ref|ZP_21066529.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443018385|gb|ELS32644.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 223
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 128/172 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG+ +DD A+ I+SQLL L+A+DP KDI L++NSPGGS+ A MAI
Sbjct: 38 DIFSRLLRERIVFLGSQVDDTTANLIMSQLLFLEAEDPDKDIYLYINSPGGSVYAGMAIL 97
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + VR DV T+ +G++AS + +L G KGKR ++PN R+MIHQP+GGA GQ +D+EI
Sbjct: 98 DTMNHVRPDVCTICMGLAASMGAFLLASGAKGKRMSLPNARIMIHQPLGGAQGQAVDIEI 157
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QAREI++ K + +++ TG+ EQ+++D +RD +MSP EA +YG+ID V+
Sbjct: 158 QAREILYIKRSLNEMLATSTGKPIEQIEQDTERDFFMSPAEAQQYGLIDQVL 209
>gi|146307078|ref|YP_001187543.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina ymp]
gi|166214700|sp|A4XTZ5.1|CLPP_PSEMY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145575279|gb|ABP84811.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
mendocina ymp]
Length = 213
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ADVST +G + S + +L GG KGKRF +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI+ ++ +++ TG+S E +++D +RD +MS AVEYG
Sbjct: 141 PLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSAPRAVEYG 200
Query: 246 IIDGVIDR 253
I+D V ++
Sbjct: 201 IVDAVHEK 208
>gi|331090536|ref|ZP_08339389.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405879|gb|EGG85407.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 193
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG + D A I++QLL L+A+DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASIIVAQLLHLEAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS+SA +AIYD +Q ++ DVST +GM+AS + +L GG KGKRFA+PN +
Sbjct: 61 QLYINSPGGSVSAGLAIYDTMQYIKCDVSTTCIGMAASMGAFLLAGGAKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ +++I A I+ + I++ TG+SFEQ+ D +RD +MS EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILKTRQKLNEILAERTGKSFEQISADTERDNFMSAKEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID V+
Sbjct: 181 EEYGLIDKVV 190
>gi|389815589|ref|ZP_10206852.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
gi|388465795|gb|EIM08109.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
Length = 203
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 132/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+R++ LG+ IDD VA++I++QLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRVIMLGSGIDDNVANSIVAQLLFLEAEDPDKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DV T+ +GM+AS + +L GTKGKR A+PN VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+H ++ +I+S TG+ + + KD DRD +M+ A+EYG+ID VI R
Sbjct: 133 ATEIEIAAKRILHLREKLNQILSERTGQPIDVISKDTDRDNFMTAERALEYGLIDQVITR 192
Query: 254 DSI 256
+
Sbjct: 193 SKL 195
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 133/186 (71%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+FLG+ IDD VA+ I++Q+L L+++DP KDI ++
Sbjct: 5 PMVVEQSNRGERAYDIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDKDINFYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG ++A MAIYD +Q ++ DV+TV +G +AS +L+L GT GKRFA+PN R+MIHQ
Sbjct: 65 NSPGGVVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAGKRFALPNARIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
PMGGA GQ D++IQA EI+ KD I+S TG++ E+V D +RD +MS +A+EYG
Sbjct: 125 PMGGAQGQATDIKIQATEILRMKDVLNEILSKHTGQNIERVAADTERDFFMSGQQALEYG 184
Query: 246 IIDGVI 251
I+D V+
Sbjct: 185 IVDRVV 190
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I+S TG+S EQ++KD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAATHILKTRAKLNKILSERTGQSIEQIEKDTDRDNFLTADEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|440684999|ref|YP_007159794.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428682118|gb|AFZ60884.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 232
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTPIDDVVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L G GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPDVVTICFGLAASMGAFLLTSGAAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K N ++++ TG+ E+++ D +RD +MS EA YG+ID VI R ++
Sbjct: 170 LYIKGNLNQLMAKHTGQPLEKIEADTERDFFMSAEEAKNYGLIDQVISRQNL 221
>gi|415938744|ref|ZP_11555478.1| ATP-dependent Clp protease, proteolytic subunit [Herbaspirillum
frisingense GSF30]
gi|407759378|gb|EKF69073.1| ATP-dependent Clp protease, proteolytic subunit [Herbaspirillum
frisingense GSF30]
Length = 204
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKERI+FL ++D +A+ I++QLL L++++P KDI
Sbjct: 11 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDI 70
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q ++ VST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 71 SLYINSPGGSVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRI 130
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I++ TGRS EQ+ KD DRD +MS A
Sbjct: 131 MIHQPLGGAQGQASDIEIQAREILYLRERLNSILADKTGRSVEQISKDTDRDNFMSADAA 190
Query: 242 VEYGIIDGVI 251
VEYG+ID V+
Sbjct: 191 VEYGLIDKVL 200
>gi|352096782|ref|ZP_08957538.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676004|gb|EHA59162.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 229
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 62 PLSS--APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPT 118
PL+S P + RG + D LL+ERI+FLG +++D VADA+++QLL L+A+DP
Sbjct: 25 PLASPGVPTVVEQSGRGERSFDIYSRLLRERIIFLGTDVNDQVADALVAQLLFLEAEDPE 84
Query: 119 KDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPN 178
KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GG KGKR A+PN
Sbjct: 85 KDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPN 144
Query: 179 TRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSP 238
R+MIHQP+GGA GQ +D+EI A+EI+ K+ +++ TG+ ++ +D +RD ++SP
Sbjct: 145 ARIMIHQPLGGAQGQAVDIEIMAQEILFLKETLNGLMADHTGQPLAKITEDTERDYFLSP 204
Query: 239 IEAVEYGIIDGVID 252
EAVEYG+ID V+D
Sbjct: 205 AEAVEYGLIDRVVD 218
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG+ I+D A+ +I+QLL L+++DP KDI
Sbjct: 1 MSLVPIVVEQTARGERSYDIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG +SA +AIYD +Q ++ DVST+ +GM+AS A+++L G KGKRFA+PN+ +
Sbjct: 61 YLYINSPGGVISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+ I A I+ K I+S TG+ E+++KD DRD +M+ +EA
Sbjct: 121 MIHQPLGGARGQATDIAIHAEHILKLKKRLNEILSERTGQPIERIEKDTDRDNFMTALEA 180
Query: 242 VEYGIIDGVIDR 253
EYG+ID VI +
Sbjct: 181 KEYGLIDDVITK 192
>gi|218295537|ref|ZP_03496350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
gi|218244169|gb|EED10695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
Length = 194
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 130/176 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG ID VA+ I++QLL LDAQ+P ++IRL++NSPGG + A +AIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VRA VST+ +GM+AS A++IL G KG+R+A+P+++VMIHQP GGA G D+ I
Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGARGTASDIAI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
QA+EI+ K I++ TG+ E+V++D DRD Y+S EA+EYG+ID V+ R+
Sbjct: 138 QAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAQEALEYGLIDQVVTREE 193
>gi|302760453|ref|XP_002963649.1| hypothetical protein SELMODRAFT_67117 [Selaginella moellendorffii]
gi|302785934|ref|XP_002974738.1| hypothetical protein SELMODRAFT_57153 [Selaginella moellendorffii]
gi|300157633|gb|EFJ24258.1| hypothetical protein SELMODRAFT_57153 [Selaginella moellendorffii]
gi|300168917|gb|EFJ35520.1| hypothetical protein SELMODRAFT_67117 [Selaginella moellendorffii]
Length = 235
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I++QLL LDA DP KDI ++VNSPGGS++A MA++D ++
Sbjct: 57 LFQHRIIRCGGAVDDDMANLIVAQLLYLDAADPKKDIVMYVNSPGGSVTAGMAVFDTMRH 116
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 117 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQQSDIEIQANEI 176
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N +S TG+ E++ +D DRD +MSP EA EYG+IDGVI + + L P+P
Sbjct: 177 LHHKANLNSYLSYHTGQPLERIIQDTDRDFFMSPKEAQEYGLIDGVIS-NPLKALSPLP 234
>gi|428211847|ref|YP_007084991.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428000228|gb|AFY81071.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 234
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 131/172 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERIVFLG +DD VAD I++Q+L LDA+DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 52 LLRERIVFLGTPVDDNVADLIVAQMLFLDAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQ 111
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV+T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 112 IRPDVATICYGLAASMGAFLLTAGAKGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEI 171
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+++K +++ TG+ E+++ D DRD +MS E+ YG+ID VI + +
Sbjct: 172 LYHKRQLNEMLAFHTGQPLERIEADTDRDFFMSAEESRAYGLIDQVITKQGL 223
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 129/179 (72%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG IDD VA++I++QLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ +VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
D+EI R I+ ++ RI++ TG+ EQ+ KD DRD +M+ +A EYG+ID VI+
Sbjct: 133 ASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVIE 191
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG IDD VA+A+++QLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +G++AS + +L G KGKRFA+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ +D +I++ TG+ E++++D DRD +MS EA YG+ID VI R
Sbjct: 133 ASDIEIHAKRILKMRDRLNKILAERTGQPLERIERDTDRDHFMSAEEAKAYGLIDEVITR 192
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIVF+G+ IDD A+ +I+QLL L+++DP KDI ++NSPGG +S
Sbjct: 13 RGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +++D++TV +G +AS + +L G KGKRF++PN+R+MIHQPMGGA GQ
Sbjct: 73 AGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+ IQA+EI+ KD +I++ TG+ EQ+Q D DRD +MS EA YGI+D VI
Sbjct: 133 ASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVI 190
>gi|323488686|ref|ZP_08093928.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
gi|323397704|gb|EGA90508.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
Length = 203
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 132/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+R++ LG+ IDD VA++I++QLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DV T+ +GM+AS + +L GTKGKR A+PN VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+H ++ +I+S TG+ + + KD DRD +M+ A+EYG+ID VI R
Sbjct: 133 ATEIEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERALEYGLIDQVITR 192
Query: 254 DSI 256
+
Sbjct: 193 SKL 195
>gi|114321437|ref|YP_743120.1| ATP-dependent Clp protease proteolytic subunit [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311052|sp|Q0A6A7.1|CLPP_ALHEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114227831|gb|ABI57630.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Alkalilimnicola ehrlichii MLHE-1]
Length = 214
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 142/202 (70%), Gaps = 11/202 (5%)
Query: 66 APQTPATAM---------RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
AP+ AT + RG A D LLKER++FL ++D +A+ I++QLL L+++
Sbjct: 10 APEIEATGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESE 69
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
+P KDI +++NSPGG+++A +AIYD +Q ++ DVSTV +G +AS +L+L GGTKGKR+A
Sbjct: 70 NPDKDIHIYINSPGGAVTAGLAIYDTMQFIKPDVSTVCIGQAASMGALLLTGGTKGKRYA 129
Query: 176 MPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRY 235
+PN+R+MIHQP+GG GQ DV+I AREI+ +D RI++ TG+ E + +D DRD +
Sbjct: 130 LPNSRMMIHQPLGGFQGQATDVDIHAREILDMRDRLNRIMAHHTGQDMETIARDTDRDNF 189
Query: 236 MSPIEAVEYGIIDGVI-DRDSI 256
MSP A EYG++D V+ DR ++
Sbjct: 190 MSPDTACEYGLVDAVLADRKAL 211
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLSAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I++ TG+S E+++KD DRD ++S EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTRAKLNKILAERTGQSIEKIEKDTDRDNFLSADEAKEYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDHVME 191
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A+ I+ ++ +I+S TG+ E+++KD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEAKEYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|113953857|ref|YP_729303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9311]
gi|113881208|gb|ABI46166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 229
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 130/168 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +++D VADA+++QLL L+A+DP KDI++++NSPGGS++A +AIYD +Q
Sbjct: 51 LLRERIIFLGTDVNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQ 110
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV T+ G++AS + +L GG KGKR A+PN R+MIHQP+GGA GQ +D+EI A+EI
Sbjct: 111 VAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIMAQEI 170
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ K+ +++ TG+ ++ +D +RD ++SP EAVEYG+ID V+D
Sbjct: 171 LFLKETLNGLMADHTGQPLAKITEDTERDYFLSPAEAVEYGLIDRVVD 218
>gi|350566316|ref|ZP_08935001.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
gi|348662942|gb|EGY79570.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
Length = 194
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 130/169 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL I+D VAD +++QLL L+A+D TKDI++++NSPGGS+SA AIYD +Q
Sbjct: 24 LLKERIIFLTGEINDQVADLVVAQLLFLEAEDNTKDIQIYINSPGGSVSAGFAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L GTKGKRFA+PN +MIHQP+GGA GQ D++IQA +I
Sbjct: 84 IKCDVSTICMGMAASMGAFLLIAGTKGKRFALPNADIMIHQPLGGAQGQATDIKIQAEKI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ +I+S TG+ ++++ D DRD Y++ EA+EYGIID VI++
Sbjct: 144 LKVRERLNKILSERTGQPLDKIELDTDRDYYLTADEALEYGIIDKVIEK 192
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL LDA+DP KDI L++NSPGGS++
Sbjct: 12 RGERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 72 AGMGIFDTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 132 ATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKEYGLIDQVIDR 191
Query: 254 DS 255
S
Sbjct: 192 SS 193
>gi|334147316|ref|YP_004510245.1| ATP-dependent Clp protease, proteolytic subunit [Porphyromonas
gingivalis TDC60]
gi|419970132|ref|ZP_14485642.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Porphyromonas gingivalis W50]
gi|333804472|dbj|BAK25679.1| ATP-dependent Clp protease, proteolytic subunit [Porphyromonas
gingivalis TDC60]
gi|392611547|gb|EIW94283.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Porphyromonas gingivalis W50]
Length = 228
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 147/224 (65%), Gaps = 8/224 (3%)
Query: 39 SVKT----RRISTKTLALQQQQRQHDVPLSSAPQTPAT----AMRGAEADAMGLLLKERI 90
+VKT ++ +T+ + L Q + S+ +P + A+ D L+ +RI
Sbjct: 3 TVKTMNEFKKYATRHIGLNAQALDDYTRIQSSYISPTIIEERQLNVAQMDVFSRLMMDRI 62
Query: 91 VFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVS 150
+FLG IDD+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + DV+
Sbjct: 63 IFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYLNSPGGSVYAGYGIYDTMQYIGCDVA 122
Query: 151 TVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDN 210
T+ GM+AS AS++L GTKGKRFA+P++RVMIHQP+GG GQ D+EI AREI+ K
Sbjct: 123 TICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQASDLEIAAREILRVKKE 182
Query: 211 FTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
IIS +G+ EQV+KD DRD +M+ EA+EYG+ID +++++
Sbjct: 183 LYTIISSHSGKPVEQVEKDSDRDYWMTAPEALEYGMIDKILEKN 226
>gi|197302444|ref|ZP_03167499.1| hypothetical protein RUMLAC_01172 [Ruminococcus lactaris ATCC
29176]
gi|197298342|gb|EDY32887.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus lactaris ATCC 29176]
Length = 193
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A I++QLL L+A DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A MAIYD +Q ++ DVSTV +GM+AS + +L GG KGKRFA+PN +
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ +++I A I+ + I++ TG+ E +Q D +RD +MS EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILRTRKTLNSILAANTGKPLEVIQTDTERDNFMSAAEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDEVI 190
>gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
Length = 215
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 138/198 (69%), Gaps = 2/198 (1%)
Query: 56 QRQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+R+ P ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+
Sbjct: 14 EREQTAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 73
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKR
Sbjct: 74 AENPEKDIHLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKR 133
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
+A+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG++ E++++D +RD
Sbjct: 134 YALPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGKTLEEIERDTERD 193
Query: 234 RYMSPIEAVEYGIIDGVI 251
R++S EAVEYG++D V+
Sbjct: 194 RFLSASEAVEYGLVDSVL 211
>gi|220909724|ref|YP_002485035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7425]
gi|219866335|gb|ACL46674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7425]
Length = 236
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 140/202 (69%), Gaps = 7/202 (3%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNN------IDDFVADAIISQLLLLDA 114
P + P + RG A D LL+ERI+FLG IDD +AD+I++QLL LD+
Sbjct: 25 PRNIVPMVVEQSGRGERAFDIYSRLLRERIIFLGGGGSNGRGIDDALADSIVAQLLFLDS 84
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
+DP +DI L++NSPGGS++A MAIYD +Q V ADV T+ G++AS + +L GG GKR
Sbjct: 85 EDPERDIYLYINSPGGSVTAGMAIYDTIQHVHADVCTICFGLAASMGAFLLAGGAAGKRM 144
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
A+P++R+MIHQP+GGA GQ +D+EIQA+EI+++K +++ TG+ FE+++ D +RD
Sbjct: 145 ALPHSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNELLAHHTGQPFERIEADTERDF 204
Query: 235 YMSPIEAVEYGIIDGVIDRDSI 256
+MS EA YG++D VI R ++
Sbjct: 205 FMSAEEAKNYGLVDQVITRQNL 226
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 136/188 (72%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERIVFLG +DD +A+ I++Q+L L+A+DP KDI L++
Sbjct: 3 PTVIETSGRGERAFDIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + I+D + +R DVST+ LG++AS + +L G KGKR ++P++R+MIHQ
Sbjct: 63 NSPGGSVSAGLGIFDTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K ++ TG+ +++ +D +RD +MSP E++EYG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKQQLNHYLAEHTGQPLDRIAEDTERDFFMSPQESMEYG 182
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 183 LIDRVIER 190
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG+S E++Q+D DRD +++ EA YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKSYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDEVME 191
>gi|117926916|ref|YP_867533.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
marinus MC-1]
gi|254763794|sp|A0LDT4.1|CLPP_MAGSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117610672|gb|ABK46127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
marinus MC-1]
Length = 202
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 133/195 (68%), Gaps = 1/195 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P T RG A D LLKER+VFL +++ +A+ +++QLL L++++P KDI
Sbjct: 1 MSLVPMVVETTNRGERAYDIYSRLLKERVVFLVGQVEEHMANLVVAQLLFLESENPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q +R VST+ +G +AS +++L G GKR +PN RV
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQFIRPSVSTLCIGQAASMGAVLLAAGEAGKRLVLPNARV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG SGQ D EI AREI+ ++N +++S TG+ EQVQ D +RD ++S EA
Sbjct: 121 MIHQPLGGFSGQASDFEIHAREILRIRENLNQVLSHHTGKPLEQVQLDTERDNFLSATEA 180
Query: 242 VEYGIIDGVIDRDSI 256
VEYG++D VI +
Sbjct: 181 VEYGLVDKVISHREL 195
>gi|119485223|ref|ZP_01619608.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
gi|119457451|gb|EAW38576.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
Length = 238
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 136/190 (71%), Gaps = 4/190 (2%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL++RI+FLG IDD +A+A+ +Q+L LDA+DP KDI+L++NSPGGS++A M IY
Sbjct: 52 DLYSRLLRDRIIFLGTAIDDEIANAVSAQMLFLDAEDPEKDIQLYINSPGGSVTAGMGIY 111
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VR DV T+ G++AS + +L GTKGKR ++PN+RVMIHQP+GG GQ +D+EI
Sbjct: 112 DTIQQVRPDVVTICYGLAASMGAFLLSSGTKGKRMSLPNSRVMIHQPLGGTQGQAVDIEI 171
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 259
QAREI+++K I++ TG+ E+++ D +RD +MS E+ EYG+ID VI + +
Sbjct: 172 QAREILYHKRILNEILAQNTGQPIERIEVDTERDFFMSAEESKEYGLIDQVISKQN---- 227
Query: 260 VPVPEKVKPG 269
P+P + P
Sbjct: 228 RPIPGESVPA 237
>gi|167766384|ref|ZP_02438437.1| hypothetical protein CLOSS21_00888 [Clostridium sp. SS2/1]
gi|317496812|ref|ZP_07955142.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|429763602|ref|ZP_19295949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerostipes hadrus DSM 3319]
gi|167711975|gb|EDS22554.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. SS2/1]
gi|291559217|emb|CBL38017.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SSC/2]
gi|316895824|gb|EFV17976.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|429178111|gb|EKY19395.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerostipes hadrus DSM 3319]
Length = 193
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A ++SQLL L+++DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVTAGLVVSQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q V+ DVST+ +GM+AS + +L GGTKGKR A+PN +
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQYVKCDVSTMCMGMAASMGAFLLSGGTKGKRLALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++EI A I+ K I+S TG+ +E + KD +RD +++ EA
Sbjct: 121 MIHQPSGGAQGQATEIEIAAEHILRTKKKLNTILSENTGQPYETIVKDTERDNWLTAQEA 180
Query: 242 VEYGIIDGVID 252
+EYG+ID V++
Sbjct: 181 LEYGLIDKVME 191
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG IDD VA+ I++QLL LDA+DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGARGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA +YG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKRRLNEYLAEHTGQPLEKIAEDTERDFFMSPEEARDYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|375106291|ref|ZP_09752552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
gi|374667022|gb|EHR71807.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
Length = 202
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 136/180 (75%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FL ++D A+ +++QLL L++++P K+I L++NSPGGS+S
Sbjct: 21 RGERAYDIYSRLLRERIIFLVGPVNDATANLVVAQLLFLESENPDKEISLYINSPGGSVS 80
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M+I+D +Q ++ +VST+ +GM+AS S +L G KGKRFA+PN+++MIHQP GGA GQ
Sbjct: 81 AGMSIFDTMQFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNSKIMIHQPSGGAQGQ 140
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI AREI+ ++ +I + TG++ E++Q D++RD YM+P+EA+EYG+ID V+++
Sbjct: 141 ATDIEIHAREILKTREQLNKIYAERTGQTLEKIQADMERDFYMNPVEALEYGLIDKVLEK 200
>gi|210615408|ref|ZP_03290535.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
gi|210150257|gb|EEA81266.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
Length = 193
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 121/167 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG + D A II+QLL L+ +DP KDI L++NSPGGS+SA +AIYD +Q
Sbjct: 24 LLKERIIFLGEEVTDASASVIIAQLLFLEGEDPEKDIHLYINSPGGSVSAGLAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS S +L GG KGKR+A+PN +MIHQP+GGA GQ +++I A I
Sbjct: 84 IKCDVSTICIGMAASMGSFLLSGGKKGKRYALPNAEIMIHQPLGGAQGQATEIQIAAEHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ + I++ TG+S E++Q D +RD +MS EA EYG++D VI
Sbjct: 144 LKTRQKLNTILAENTGQSLEKIQADTERDNFMSAQEAKEYGLVDEVI 190
>gi|299143348|ref|ZP_07036428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517833|gb|EFI41572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 194
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 129/174 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL I+D AD +++QLL L+A+D KDI++++NSPGGS+SA AIY
Sbjct: 19 DIYSRLLKERIIFLSGEINDVTADLVVAQLLFLEAEDQNKDIQIYINSPGGSVSAGFAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G++AS + +L GTKGKRFA+PN +MIHQP+GGA GQ D++I
Sbjct: 79 DTIKYIKCDVSTMVIGLAASMGAFLLAAGTKGKRFALPNADIMIHQPLGGAQGQASDIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A +I+ ++ +I+S TG+ E+V++D DRD Y+S EAVEYG+ID VI++
Sbjct: 139 HAEKILEIRERINKILSEETGQPLEKVERDTDRDYYLSAKEAVEYGLIDKVIEK 192
>gi|425465976|ref|ZP_18845279.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389831694|emb|CCI25350.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 233
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV+T+ G++AS + +L GG GKR ++P++R+MIHQP+GGA GQ D+ I
Sbjct: 107 DTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QA+EI++ K +++ TG+ ++++ D +RD +MS +EA EYG+ID VI R + P
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPELPDP 226
Query: 259 LVPV 262
VPV
Sbjct: 227 TVPV 230
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
Length = 217
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 125/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIVFLG+ I+D VA II+QLL L+++DP KDIRL++NSPGG ++A + IYD +Q
Sbjct: 33 LLKDRIVFLGDPINDRVASIIIAQLLFLESEDPDKDIRLYINSPGGVVTAGLGIYDTMQY 92
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DV+T LG +AS + +L GG KGKRFA+PN R+MIHQP GGASGQ D+EIQAREI
Sbjct: 93 VRCDVATYCLGQAASMGAFLLAGGAKGKRFALPNARIMIHQPHGGASGQATDIEIQAREI 152
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K I++ +GR+ +++ D DRD +M EA +YG+ID V+ R
Sbjct: 153 LRLKAKLNEIMARHSGRTVDEILADTDRDNFMGADEAKKYGLIDEVLRR 201
>gi|427730195|ref|YP_007076432.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427366114|gb|AFY48835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 232
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 130/177 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG IDD VA+ I++QLL LDA+D KDI+L++NSPGGS+ A MAIY
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIY 104
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 105 DTIQQIRPDVVTICFGLAASMGAFLLTAGTPGKRMSLPDSRIMIHQPLGGAQGQAIDIEI 164
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
QAREI++ K ++++ TG+ E+++ D DRD +MS EA YG+ID VI R ++
Sbjct: 165 QAREILYIKAQLNQLLAKHTGQPLERIETDTDRDFFMSAEEAKSYGLIDQVISRQNL 221
>gi|218440073|ref|YP_002378402.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp.
PCC 7424]
gi|218172801|gb|ACK71534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 229
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG IDD VAD+I++QLL LDA+DP KDI++++NSPGGS+ A +AIY
Sbjct: 42 DIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQIYINSPGGSVYAGLAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GG KGKR A+P+ R+MIHQP+GGA GQ ++++I
Sbjct: 102 DTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARMMIHQPIGGAQGQAVEIDI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QA+EI++ K +++ TG+ ++++ +D +RD YMS +A YG+ID VI R + P
Sbjct: 162 QAKEILYIKQRLNTLLAEHTGQPYDRIAEDTERDFYMSAYDAKNYGLIDQVIARSELPDP 221
Query: 259 LVPV 262
VPV
Sbjct: 222 TVPV 225
>gi|291548434|emb|CBL21542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
sp. SR1/5]
Length = 193
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 131/190 (68%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D A+ I++QLL L+A+DP+KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSANLIVAQLLFLEAEDPSKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A MAIYD +Q ++ DVST+ LGM+AS + +L G KGKR+A+PN+ +
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTICLGMAASMGAFLLSSGAKGKRYALPNSTI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A +I K I+S TG+ E V+KD DRD YM+ EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADQIAKTKKKLNEILSANTGQPLEIVEKDTDRDNYMTAEEA 180
Query: 242 VEYGIIDGVI 251
YG+IDGV+
Sbjct: 181 KAYGLIDGVV 190
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL LDA+DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKRKLNGYLAQHTGQPLERIAEDTERDFFMSPEEAQEYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|76262827|gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 306
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 171/284 (60%), Gaps = 33/284 (11%)
Query: 1 MDLLSVSSTSTSHLHFS--LYKP-PNFSL-SKSLPLSFKPISSVKTRR------------ 44
M + + TS S L F+ L+ P P+ S S+SL L +P+ S K ++
Sbjct: 1 MAAICLHPTSASSLRFNSLLFSPNPSSSFESQSLCLPLEPLRSRKLKKLVSNQKKVRNST 60
Query: 45 ---ISTKTLALQQQQRQ------HDVPLSSAPQTPATA--------MRGAEADAMGLLLK 87
+ T L + + Q D+ + S+P PA A ++ + L +
Sbjct: 61 AKAVYTSNLRMPESSHQGIWSIRDDLQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
Query: 88 ERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRA 147
RI+ G +DD +A+ I++QLL LDA DP KDI ++VNSPGGS++A MA++D ++ +R
Sbjct: 121 HRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAVFDTMRHIRP 180
Query: 148 DVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHN 207
DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E++H+
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
Query: 208 KDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K N ++ TG+S E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 241 KANLNSYLAYHTGQSLERINQDTDRDFFMSAKEAKEYGLIDGVI 284
>gi|34540241|ref|NP_904720.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
gingivalis W83]
gi|60389708|sp|Q7MX09.1|CLPP_PORGI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34396553|gb|AAQ65619.1| ATP-dependent Clp protease, proteolytic subunit [Porphyromonas
gingivalis W83]
Length = 222
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 129/178 (72%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A+ D L+ +RI+FLG IDD+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A
Sbjct: 43 AQMDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYLNSPGGSVYAGY 102
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
IYD +Q + DV+T+ GM+AS AS++L GTKGKRFA+P++RVMIHQP+GG GQ D
Sbjct: 103 GIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQASD 162
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+EI AREI+ K IIS +G+ EQV+KD DRD +M+ EA+EYG+ID +++++
Sbjct: 163 LEIAAREILRVKKELYTIISSHSGKPVEQVEKDSDRDYWMTAPEALEYGMIDKILEKN 220
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 130/174 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVF+ IDD +A+ +I+QLL L+++DP KDI L++NSPGGS+SA MAIY
Sbjct: 19 DIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPGGSVSAGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS AS++L G GKRFA+P +RVMIHQP+GGA GQ ++EI
Sbjct: 79 DTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRVMIHQPLGGAQGQATEIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+ ++ ++++ TG++ E++ D +RD Y++ EA EYG+ID V+ R
Sbjct: 139 HAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEAKEYGLIDEVVSR 192
>gi|295109356|emb|CBL23309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
obeum A2-162]
Length = 193
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D A I++QLL L+A+DP+KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSASIIVAQLLFLEAEDPSKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A MAIYD ++ ++ DVST+ LGM+AS + +L GGTKGKR+A+P++ +
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMKYIKCDVSTICLGMAASMGAFLLAGGTKGKRYALPHSTI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I K I++ TG+ +E V+KD DRD YM+ EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEA 180
Query: 242 VEYGIIDGVIDR 253
YG+IDGV++
Sbjct: 181 KAYGLIDGVVEH 192
>gi|212640342|ref|YP_002316862.1| ATP-dependent Clp protease proteolytic subunit [Anoxybacillus
flavithermus WK1]
gi|433447199|ref|ZP_20410832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
gi|226706440|sp|B7GL34.1|CLPP_ANOFW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212561822|gb|ACJ34877.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Anoxybacillus flavithermus WK1]
gi|432000033|gb|ELK20939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
Length = 196
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D RI+S TG+ E +++D DRD +M+ +A EYG+ID V+ R
Sbjct: 133 ATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRVLTR 192
>gi|116873833|ref|YP_850614.1| ATP-dependent Clp protease proteolytic subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742711|emb|CAK21835.1| ATP-dependent Clp protease proteolytic subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 198
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I+S TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMSEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|342731984|ref|YP_004770823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455401|ref|YP_005667995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417962125|ref|ZP_12604399.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|417963799|ref|ZP_12605667.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|417967677|ref|ZP_12608746.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|418016623|ref|ZP_12656188.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372234|ref|ZP_12964326.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329439|dbj|BAK56081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506958|gb|EGX29252.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346983743|dbj|BAK79419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331068|gb|EIA22177.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|380331769|gb|EIA22747.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|380340900|gb|EIA29436.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|380341903|gb|EIA30348.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 194
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 128/174 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FLG+ ++D A +++QLL L+++D KDI L++NSPGGS++A MAIY
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLVVAQLLFLESEDTDKDIHLYINSPGGSITAGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GG GQ D++I
Sbjct: 79 DTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGFRGQATDIDI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AR I+ K++ +I+S TG+S Q++ D++RD ++S EA EYG+ID VI +
Sbjct: 139 HARRILRMKNDLNKILSENTGKSLSQIELDVERDHFLSSYEAKEYGLIDNVISK 192
>gi|340787626|ref|YP_004753091.1| ATP-dependent Clp protease proteolytic subunit [Collimonas
fungivorans Ter331]
gi|340552893|gb|AEK62268.1| ATP-dependent Clp protease proteolytic subunit [Collimonas
fungivorans Ter331]
Length = 208
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FL ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q
Sbjct: 38 LLRERIIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQF 97
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ ++ST+ GM+AS + +L G KGKRF++PN+R+MIHQP+GGA GQ D+EIQAREI
Sbjct: 98 VKPEISTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREI 157
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ ++ I++ TGRS EQ+ KD DRD +MS AVEYG+ID V+
Sbjct: 158 LYLRERLNGILADKTGRSIEQISKDTDRDNFMSADAAVEYGLIDKVL 204
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +D +A+ I++QLL LD++DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ F+++ +D +RD +MSP E+ EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQESREYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 136/191 (71%), Gaps = 1/191 (0%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P + RG A D LL+ERIVFLG +D +A+ +++QLL LDA+DP KDI
Sbjct: 6 SMIPTVIEQSGRGERAFDIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIY 65
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
L++NSPGGS++A M I+D ++ +R DV T+ LG++AS + +L G KGKR ++P++R+M
Sbjct: 66 LYINSPGGSVTAGMGIFDTMKQIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIM 125
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP+GGA GQ D+EIQA+EI+++K +++ TG+ F ++Q+D +RD +MS EA
Sbjct: 126 IHQPLGGAQGQATDIEIQAKEILYHKQRLNELLAEHTGQPFSRIQEDTERDFFMSAGEAK 185
Query: 243 EYGIIDGVIDR 253
+YG+ID VIDR
Sbjct: 186 DYGLIDQVIDR 196
>gi|330503117|ref|YP_004379986.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina NK-01]
gi|328917403|gb|AEB58234.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina NK-01]
Length = 213
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++F+ ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLICAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ADVST +G + S + +L GG KGKRF +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI+ ++ +++ TG+S E +++D +RD +MS AVEYG
Sbjct: 141 PLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSASRAVEYG 200
Query: 246 IIDGVIDR 253
++D V ++
Sbjct: 201 LVDAVHEK 208
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LL++RI+FLG +DD +A+ I++Q+L L+++DP KDI L++
Sbjct: 3 PTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+ A MAIYD +Q ++ DVST+ +G++AS + +L GGTKGKR A+P+ R+MIHQ
Sbjct: 63 NSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA G D+EIQA+EI+ K++ +++ TG+ E++++D DRD +M+P +A EYG
Sbjct: 123 PLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYG 182
Query: 246 IIDGVIDR 253
+ID VI +
Sbjct: 183 LIDQVISK 190
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 197
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 134/178 (75%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +DD V++ I++Q+L L+A+DP KDI L+VNSPGGS++
Sbjct: 11 RGERAFDIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYLYVNSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +G++AS + +L GG GKR ++P+TR+MIHQP+GGA GQ
Sbjct: 71 AGMAIYDTMQHIQPDVSTICVGLAASMGAFLLAGGAAGKRLSLPHTRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EIQA+EI+++K +++ TG+ F+++ +D +RD +MS EA +YG++D V+
Sbjct: 131 AADIEIQAKEILYHKQRLNELLASHTGQPFDRIAEDTERDFFMSAQEAKDYGLLDEVV 188
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +D +A+ I++QLL LD++DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R +V T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKNIRPNVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ F+++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQEAREYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|329296782|ref|ZP_08254118.1| ClpP [Plautia stali symbiont]
Length = 207
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 136/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVPLSS-APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R+ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REFTAPTNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG+S EQ+++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEQIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSASEAVEYGLVDSIL 203
>gi|410697314|gb|AFV76382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
oshimai JL-2]
Length = 194
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 129/176 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG ID VA+ +++QLL LDAQ+P ++IRL++NSPGG + A +AIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANTVVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VRA VST+ +GM+AS A++IL G KG+R+A+P+ +VMIHQP GGA G D+ I
Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGARGTASDIAI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
QA+EI+ K I++ TG+ E+V++D DRD Y+S EA+EYG+ID V+ R+
Sbjct: 138 QAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAKEALEYGLIDQVVTREE 193
>gi|342216862|ref|ZP_08709509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 375 str. F0436]
gi|341587752|gb|EGS31152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 375 str. F0436]
Length = 194
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLKERI+FL ++D +AD I++QLL L+++DP KDI
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLSGEVNDVMADLIVAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++++NSPGGS+SA AIYD +Q ++ DVST+ +GM+AS + +L GT GKR+A+PN +
Sbjct: 61 QIYINSPGGSVSAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGTIGKRYALPNADI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D++I A +I+ ++ RI+S TG+S+EQ+ D DRD YM+ EA
Sbjct: 121 MIHQPLGGAQGQASDIKIHAEKILKTRERLNRILSDRTGKSYEQIDLDTDRDFYMTADEA 180
Query: 242 VEYGIIDGVI 251
V+YG+ID V+
Sbjct: 181 VDYGLIDKVV 190
>gi|325291111|ref|YP_004267292.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
gi|324966512|gb|ADY57291.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
Length = 202
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG +DD++A+ I++QLL LDA+DP KDI L++NSPGGS+SA MAIYD +Q
Sbjct: 25 LLKDRIIFLGGQVDDYMANLIVAQLLFLDAEDPEKDIFLYINSPGGSISAGMAIYDTMQH 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP-MGGASGQVLDVEIQARE 203
VRADV T+ +G++AS + +L G KGKR A+PN+ ++IHQP +GG SGQ ++EI A+
Sbjct: 85 VRADVHTICVGLAASMGAFLLASGAKGKRTALPNSEILIHQPLLGGLSGQATEIEIHAKH 144
Query: 204 IMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
I+ K+ R+++ TG+ E++++D DRDRY++ EA EYG++D ++++
Sbjct: 145 ILRVKERMNRLLAEMTGQPVERIEQDTDRDRYLTAQEAKEYGLVDQILEK 194
>gi|73541074|ref|YP_295594.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
JMP134]
gi|124013825|sp|Q472D3.1|CLPP_RALEJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72118487|gb|AAZ60750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ralstonia
eutropha JMP134]
Length = 216
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 144/214 (67%), Gaps = 7/214 (3%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFV 101
R +T+ AL+ Q L P + RG A D LLKER+VFL ++D
Sbjct: 9 RLATTQASALETQ------GLGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGEVNDQT 62
Query: 102 ADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTA 161
A+ +++QLL L++++P KDI L++NSPGGS+SA +AIYD +Q V+ DV T+ +GM+AS
Sbjct: 63 ANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMG 122
Query: 162 SLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGR 221
+ +L G KGKR A+PN+R+MIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+
Sbjct: 123 AFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQ 182
Query: 222 SFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
E++ +D DRD +MS +AV+YG+ID VI R S
Sbjct: 183 PVEKIARDTDRDNFMSGDQAVDYGLIDKVIARRS 216
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|352683492|ref|YP_004895475.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|350278145|gb|AEQ21335.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
Length = 199
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+ I+D +A+ I++QLL L+++DP KDI L++NSPGGS+SA +AIY
Sbjct: 22 DIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLESEDPDKDIHLYINSPGGSVSAGLAIY 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DVST+ +GM+AS AS++L G KGKRFA+P++RVMIHQP+GGA GQ D+EI
Sbjct: 82 DTMQYIRPDVSTICVGMAASMASILLAAGAKGKRFALPHSRVMIHQPLGGAQGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ ++ +I++ TG+ E ++ D +RD Y++ EA+ YG+ID V+
Sbjct: 142 HAREILRVREEMNQILAAHTGKDPETIKLDTERDHYLTADEALSYGLIDQVV 193
>gi|251794211|ref|YP_003008942.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247541837|gb|ACS98855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P + RG A D LLK+RI+FLG+ ++D VA++II+Q+L L A+DP KDI
Sbjct: 3 MNFVPMVIEQSNRGERAYDIYSRLLKDRIIFLGSGVNDVVANSIIAQMLFLAAEDPEKDI 62
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G GKR+A+PN+ V
Sbjct: 63 SLYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEV 122
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+AR I+ +D I++ +G+ E+++KD DRD +MS EA
Sbjct: 123 MIHQPLGGAEGQASDIEIRARRIIKMRDKLNGILAERSGQPLERIEKDTDRDYFMSAEEA 182
Query: 242 VEYGIIDGVIDR 253
+YG++D VI+R
Sbjct: 183 RQYGLVDKVIER 194
>gi|365969260|ref|YP_004950821.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
gi|365748173|gb|AEW72400.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
Length = 233
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 58 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 117
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 118 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 177
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D V+
Sbjct: 178 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSASEAVEYGLVDSVL 229
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 136/191 (71%), Gaps = 5/191 (2%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL LD++D KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+ IQAREI+++K ++ TG+ FE++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIAIQAREILYHKQRLNEFLADHTGQPFERISEDTERDFFMSPAEAKEYGLIDQVIDR 190
Query: 254 DSI----IPLV 260
+ +PLV
Sbjct: 191 HAAGSRPVPLV 201
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4.1|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I++ TG+S EQ++KD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|410452503|ref|ZP_11306492.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
bataviensis LMG 21833]
gi|409934548|gb|EKN71433.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
bataviensis LMG 21833]
Length = 201
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 133/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD V+++I++QLL L+A++P KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ADVSTV +GM+AS + +L G KGKR+A+PN VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQYIKADVSTVCIGMAASMGAFLLAAGEKGKRYALPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ ++ I+S TG+ E +Q+D DRD +M+ A EYG+ID ++ R
Sbjct: 133 ATEIEIAAKRILFLREKLNGILSERTGQPLEVIQRDTDRDNFMTAERAKEYGLIDNIVTR 192
Query: 254 DSI 256
+ I
Sbjct: 193 NPI 195
>gi|317047175|ref|YP_004114823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
gi|316948792|gb|ADU68267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
Length = 207
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 136/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R+ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REFTAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG+S EQ+++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEQIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSASEAVEYGLVDSIL 203
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P + RG A D LLK+RI+FLG IDD VA+ +I+QLL L+++DP KDI
Sbjct: 1 MNYVPMVVEQSGRGERAYDIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A +AIYD +Q ++ DVST+ +G +AS S++L G KGKR+A+P +R+
Sbjct: 61 HLYINSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D++IQAREI+ ++ I+S TG+S +++ +D +RD +MS +EA
Sbjct: 121 MIHQPLGGAQGQSTDIQIQAREILRIRETLNEILSRHTGQSVKKLTEDTERDNFMSALEA 180
Query: 242 VEYGIIDGVIDR 253
+YG+ID VI R
Sbjct: 181 KKYGLIDEVIIR 192
>gi|218779308|ref|YP_002430626.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfatibacillum alkenivorans AK-01]
gi|259585946|sp|B8FA62.1|CLPP_DESAA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218760692|gb|ACL03158.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfatibacillum alkenivorans AK-01]
Length = 201
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 136/199 (68%), Gaps = 5/199 (2%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG D LLK+RI+FLG ++D VA++II+QLL L++ DP KDI
Sbjct: 1 MSYIPYVVEQTSRGERTYDIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS++A MAIYD + ++ +++TV +G +AS +++L G GKR+++PN R+
Sbjct: 61 NFYINSPGGSVTAGMAIYDTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
+IHQPMGG GQ D+ IQA+EI+ K+ I++ TG+ +QVQ+D DRD +MSP+EA
Sbjct: 121 LIHQPMGGFQGQASDIAIQAQEILRMKEALNEILASHTGKPLKQVQQDTDRDYFMSPLEA 180
Query: 242 VEYGIIDGVI----DRDSI 256
EYG+ID VI D DSI
Sbjct: 181 KEYGLIDHVILNREDLDSI 199
>gi|442805909|ref|YP_007374058.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741759|gb|AGC69448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 193
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 129/174 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL++RI+FL + ++D A I++Q+L LDA+DP KDI+ ++NSPGGS++A +AIY
Sbjct: 19 DIYSRLLEDRIIFLSDEVNDATASLIVAQMLFLDAKDPDKDIQFYINSPGGSVTAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ADVST+ +GM+AS + +L GTKGKRFA+PN+ +MIHQP GGA G D++I
Sbjct: 79 DTMQHVKADVSTICVGMAASMGAFLLAAGTKGKRFALPNSTIMIHQPAGGAKGPATDIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A I+ KDN RI++ TG+ E++Q+D++RD +MS EA EYGI+D V+ R
Sbjct: 139 HAEWILKIKDNLNRILAEKTGQPLEKIQRDVERDYFMSAWEAKEYGIVDEVMVR 192
>gi|375088858|ref|ZP_09735196.1| ATP-dependent Clp protease proteolytic subunit [Dolosigranulum
pigrum ATCC 51524]
gi|374561823|gb|EHR33162.1| ATP-dependent Clp protease proteolytic subunit [Dolosigranulum
pigrum ATCC 51524]
Length = 197
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ +G+ ID+ A++++SQLL LDAQD TKDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMIGDAIDNNTANSVVSQLLFLDAQDSTKDIYLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD + ++ADV T+ LG+SAS +++ G KGKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMNFIKADVQTIVLGLSASMGAILSSSGAKGKRFALPNAELMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++EI A+ I+ ++ +I++ TG+ E+VQKD DRD +M+ EA+EYG+ID ++D
Sbjct: 133 ATEIEIAAKNILRTRERLNKILADKTGQPLERVQKDTDRDNFMTAEEALEYGLIDEIMD 191
>gi|414075396|ref|YP_006994714.1| ATP-dependent ClpP protease [Anabaena sp. 90]
gi|413968812|gb|AFW92901.1| ATP-dependent ClpP protease [Anabaena sp. 90]
Length = 225
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LD++D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTPIDDVVANSIVAQLLFLDSEDAEKDIQLYINSPGGSVYAGMAIYDTIQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPDVVTICFGLAASMGAFLLTSGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K +++S TG+ E+++ D +RD +MS EA YG+ID VI R ++
Sbjct: 170 LYIKGELNQLMSKHTGQPLERIETDTERDFFMSAEEAKNYGLIDQVISRQNL 221
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D+ +A+ I++QLL LDA+DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKKRLNDYLADHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
fibrisolvens 16/4]
Length = 194
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 126/169 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIVFLG +++ A ++QLL L+++DP+KDI L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKDRIVFLGEEVNETTASLTVAQLLFLESEDPSKDIHLYINSPGGSVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L GG KGKRFA+PN VMIHQP+GGA GQ ++EI A+ I
Sbjct: 84 IKCDVSTICIGMAASMGAFLLAGGQKGKRFALPNAEVMIHQPLGGAKGQATEIEIAAKNI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ R+++ TG+ +EQV D +RD ++ EA++YG+ID +I +
Sbjct: 144 LKTREKLNRMLAANTGKDYEQVCLDTERDHWLDAQEALDYGLIDEIITK 192
>gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|390442513|ref|ZP_10230504.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422303000|ref|ZP_16390356.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425435289|ref|ZP_18815746.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425439908|ref|ZP_18820220.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425452211|ref|ZP_18832029.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425458445|ref|ZP_18837933.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425472440|ref|ZP_18851281.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440754784|ref|ZP_20933986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|389680218|emb|CCH91098.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389719747|emb|CCH96448.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389766108|emb|CCI08183.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792060|emb|CCI12154.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389822691|emb|CCI29606.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389834168|emb|CCI34630.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389881467|emb|CCI37973.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440174990|gb|ELP54359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 233
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV+T+ G++AS + +L GG GKR ++P++R+MIHQP+GGA GQ D+ I
Sbjct: 107 DTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QA+EI++ K +++ TG+ ++++ D +RD +MS +EA EYG+ID VI R + P
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDLVISRPELPDP 226
Query: 259 LVPV 262
VPV
Sbjct: 227 TVPV 230
>gi|427706272|ref|YP_007048649.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427358777|gb|AFY41499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 232
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LD++D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTAIDDTVANSIVAQLLFLDSEDAEKDIQLYINSPGGSVYAGMAIYDTIQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R +V T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPNVVTICFGLAASMGAFLLAAGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K ++++ TG+ E+++ D DRD +MS EA YG+ID VI R ++
Sbjct: 170 LYIKGQLNQLLAHHTGQPLERLEADTDRDFFMSAEEAKNYGLIDQVISRQNL 221
>gi|320450477|ref|YP_004202573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
scotoductus SA-01]
gi|320150646|gb|ADW22024.1| ATP-dependent Clp protease, proteolytic, subunit ClpP [Thermus
scotoductus SA-01]
Length = 212
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 128/171 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ID VA+ I++QLL LDAQ+P ++IRL++NSPGG + A +AIYD +Q
Sbjct: 41 LLKDRIIFLGTPIDSQVANIIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIYDTMQF 100
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VRA VST+ +GM+AS A++IL G KG+R+A+P+++VMIHQP GG G D+ IQA+EI
Sbjct: 101 VRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGVRGTASDIAIQAQEI 160
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+ K I++ TG+ E+V+KD DRD Y+S EA+EYG+ID V+ R+
Sbjct: 161 LKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVVTREE 211
>gi|291550775|emb|CBL27037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
torques L2-14]
Length = 193
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A I++QLL L+A DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A +AIYD +Q ++ DVSTV +GM+AS + +L GG KGKRFA+PN +
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ K I++ TG+ E +Q+D +RD +MS EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILRTKKKLNEILAANTGKPLEVIQQDTERDNFMSAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDEVI 190
>gi|302833543|ref|XP_002948335.1| hypothetical protein VOLCADRAFT_80119 [Volvox carteri f.
nagariensis]
gi|300266555|gb|EFJ50742.1| hypothetical protein VOLCADRAFT_80119 [Volvox carteri f.
nagariensis]
Length = 256
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 130/173 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L ++RIV LG +DD +A+ +++QLL LD+ DP +DI ++VNSPGGS++A MA++D ++
Sbjct: 74 LFQQRIVRLGGAVDDDMANLLVAQLLYLDSVDPKRDITMYVNSPGGSVTAGMAVFDTMRH 133
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVST +GM+AS + IL G +GKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 134 IRPDVSTCCIGMAASMGAFILTSGQQGKRYSLPNSRIMIHQPLGGAQGQATDIEIQANEI 193
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
+H+K ++ F+G+S E + KD DRD +MSP EA+EYG+ID +I + ++
Sbjct: 194 LHHKLTLNGYLAQFSGQSMETITKDTDRDFFMSPQEAIEYGLIDAIIAKPQLL 246
>gi|298491692|ref|YP_003721869.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298233610|gb|ADI64746.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 232
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 131/172 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSGKDIQLYINSPGGSVYAGMAIYDTIQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K N ++++ TG+ ++++ D +RD +MS EA YG+ID VI R ++
Sbjct: 170 LYIKGNLNQLMAKHTGQPLDRIEADTERDFFMSAEEAKNYGLIDQVISRQNL 221
>gi|206578475|ref|YP_002240083.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae 342]
gi|238893386|ref|YP_002918120.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288936834|ref|YP_003440893.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|290510110|ref|ZP_06549480.1| Clp protease [Klebsiella sp. 1_1_55]
gi|365138464|ref|ZP_09345148.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|386033452|ref|YP_005953365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|419973312|ref|ZP_14488737.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978496|ref|ZP_14493792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983882|ref|ZP_14499031.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989934|ref|ZP_14504908.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995813|ref|ZP_14510618.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000724|ref|ZP_14515382.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007650|ref|ZP_14522143.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013285|ref|ZP_14527596.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018370|ref|ZP_14532567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024461|ref|ZP_14538474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030219|ref|ZP_14544046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035322|ref|ZP_14548986.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041656|ref|ZP_14555152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047717|ref|ZP_14561033.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053419|ref|ZP_14566597.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058263|ref|ZP_14571276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064551|ref|ZP_14577360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070362|ref|ZP_14583014.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076107|ref|ZP_14588580.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084374|ref|ZP_14596634.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|424829257|ref|ZP_18253985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934796|ref|ZP_18353168.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425078088|ref|ZP_18481191.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425080158|ref|ZP_18483255.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425088721|ref|ZP_18491814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425090280|ref|ZP_18493365.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149078|ref|ZP_18996910.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933610|ref|ZP_19007158.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|428939231|ref|ZP_19012344.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|449060067|ref|ZP_21737739.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
gi|206567533|gb|ACI09309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae 342]
gi|238545702|dbj|BAH62053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891543|gb|ADC59861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|289776826|gb|EFD84824.1| Clp protease [Klebsiella sp. 1_1_55]
gi|339760580|gb|AEJ96800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|363654924|gb|EHL93797.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|397348784|gb|EJJ41882.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351567|gb|EJJ44650.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354933|gb|EJJ47959.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366797|gb|EJJ59412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368455|gb|EJJ61061.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372939|gb|EJJ65411.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380234|gb|EJJ72419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384351|gb|EJJ76471.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390327|gb|EJJ82237.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399076|gb|EJJ90733.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402040|gb|EJJ93652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408058|gb|EJJ99434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416557|gb|EJK07730.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418193|gb|EJK09352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424204|gb|EJK15111.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433257|gb|EJK23907.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437304|gb|EJK27873.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441744|gb|EJK32110.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447618|gb|EJK37808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450260|gb|EJK40370.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405591067|gb|EKB64580.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601813|gb|EKB74966.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405607083|gb|EKB80053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613964|gb|EKB86685.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808983|gb|EKF80234.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|414706676|emb|CCN28380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304302|gb|EKV66449.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|426304864|gb|EKV66998.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|427540935|emb|CCM93048.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874275|gb|EMB09330.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
Length = 207
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAAEAVEYGLVDSIL 203
>gi|443660052|ref|ZP_21132510.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806]
gi|443332568|gb|ELS47168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 233
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV+T+ G++AS + +L GG GKR ++P++R+MIHQP+GGA GQ D+ I
Sbjct: 107 DTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QA+EI++ K +++ TG+ ++++ D +RD +MS +EA EYG+ID VI R + P
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDLVISRPELPDP 226
Query: 259 LVPV 262
VPV
Sbjct: 227 TVPV 230
>gi|152968972|ref|YP_001334081.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262042473|ref|ZP_06015632.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011533|ref|ZP_08307119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|378977299|ref|YP_005225440.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|402782116|ref|YP_006637662.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|421908672|ref|ZP_16338507.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918682|ref|ZP_16348197.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|150953821|gb|ABR75851.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259040177|gb|EEW41289.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534150|gb|EGF60785.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|364516710|gb|AEW59838.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|402542978|gb|AFQ67127.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|410117463|emb|CCM81132.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118949|emb|CCM90822.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
Length = 194
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q
Sbjct: 24 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI AREI
Sbjct: 84 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 144 LKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAAEAVEYGLVDSIL 190
>gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 134/178 (75%)
Query: 76 GAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSAT 135
G D L +ERI+FLG+ IDD +A+ II +L LD +D TK I L++NSPGGS+ +
Sbjct: 18 GEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDSTKPIYLYINSPGGSVISG 77
Query: 136 MAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVL 195
+AI+D +QL++++V T+ LG++AS AS IL G+KGKR A+P++R+MIHQPMGGA GQ
Sbjct: 78 LAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLALPSSRIMIHQPMGGAQGQAQ 137
Query: 196 DVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D++++A +IM +DN ++ S FTG++ EQ+ KD+DRD +MS EA+EYG+ID V++R
Sbjct: 138 DIKVEAAQIMRIRDNLVKMYSMFTGQTTEQITKDLDRDNFMSAQEALEYGLIDRVLER 195
>gi|254468869|ref|ZP_05082275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
gi|207087679|gb|EDZ64962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
Length = 207
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 134/194 (69%), Gaps = 1/194 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
V L P + RG + D LLKER+VFL +DD A+ +++QLL L+A++P K
Sbjct: 13 VGLGYIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVDDMTANLVVAQLLFLEAENPDK 72
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A MAIYD +Q ++ DVST+ +G +AS +L+L G K KRF +PN+
Sbjct: 73 DISLYINSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRFCLPNS 132
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
RVMIHQP+GG GQ D+EI A+EI++ KD RI+S TG+ + + KD DRD +MS
Sbjct: 133 RVMIHQPLGGFQGQASDIEIHAKEILYLKDKLNRILSHHTGQDIKTISKDTDRDNFMSSE 192
Query: 240 EAVEYGIIDGVIDR 253
+AV+YG++D VI+
Sbjct: 193 DAVKYGLVDKVINE 206
>gi|444352821|ref|YP_007388965.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
gi|443903651|emb|CCG31425.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
Length = 220
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 45 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 104
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 105 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 164
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 165 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 216
>gi|270263570|ref|ZP_06191839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|333925889|ref|YP_004499468.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333930842|ref|YP_004504420.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|386327713|ref|YP_006023883.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|421781988|ref|ZP_16218448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
plymuthica A30]
gi|270042454|gb|EFA15549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|333472449|gb|AEF44159.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|333489949|gb|AEF49111.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333960046|gb|AEG26819.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|407755862|gb|EKF65985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
plymuthica A30]
Length = 207
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S S +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG++ EQ+++D +RDR+M+ EAVEYG++DG++ S
Sbjct: 152 HAREILKVKARMNELMAEHTGQTLEQIERDTERDRFMTAEEAVEYGLVDGILTHRS 207
>gi|336113414|ref|YP_004568181.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347750878|ref|YP_004858443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
gi|335366844|gb|AEH52795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347583396|gb|AEO99662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
Length = 196
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD V+++I+SQLL L+A++P KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVSNSIVSQLLFLEAENPEKDIYLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q+++ DV T+ +GM+AS S++L GTKGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQIIKPDVQTICVGMAASMGSVLLTAGTKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I++ + +I+S TG+ E +++D DRD +MS +A EYG+ID ++ +
Sbjct: 133 ATEIEIAAKHILYTRAKLNKILSDHTGQPIEVIERDTDRDNFMSAEKAKEYGLIDHIMTK 192
Query: 254 DSI 256
+
Sbjct: 193 KEL 195
>gi|254421271|ref|ZP_05034989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196188760|gb|EDX83724.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 269
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 134/196 (68%), Gaps = 1/196 (0%)
Query: 59 HDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDP 117
H S P + RG A D LL+ERIVFLG + D +AD+I++QLL LDA+DP
Sbjct: 62 HASTRSMLPMVVEQSGRGERAFDIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDP 121
Query: 118 TKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMP 177
KD++L++NSPGGS++A MAIYD +Q +R DV T+ G++AS + +L GG KGKR ++P
Sbjct: 122 EKDVQLYINSPGGSVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMSLP 181
Query: 178 NTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMS 237
+ R+MIHQP GGA GQ D+EIQAREI++ K +++ TG+ +++ D +RD +MS
Sbjct: 182 SARIMIHQPSGGAQGQSADIEIQAREILYLKKRLNEMLADHTGQDISRIEADTERDFFMS 241
Query: 238 PIEAVEYGIIDGVIDR 253
EA EYG+ID V+ R
Sbjct: 242 AEEAKEYGLIDQVVSR 257
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I++ TG+S E+++KD DRD ++S EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYG 184
Query: 246 IIDGVI 251
++D V+
Sbjct: 185 LVDQVM 190
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|401680587|ref|ZP_10812502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429760069|ref|ZP_19292559.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|400218495|gb|EJO49375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429178474|gb|EKY19752.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
Length = 197
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+I+Q+L L+A+DP KDI L++NSPGG ++A MAIYD +Q
Sbjct: 23 LLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +++L G KGKRFA+P+ RVMIHQP+GG GQ ++EI AREI
Sbjct: 83 IKPDVSTICVGSAASMGAVLLTAGAKGKRFALPHARVMIHQPLGGVQGQASEIEIHAREI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ ++ I++ +G+ E V +D DRD +MS +AVEYG+ID V+ RD++
Sbjct: 143 LRMREELNGILAARSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVLTRDTL 194
>gi|239828281|ref|YP_002950905.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
WCH70]
gi|259585956|sp|C5D7M9.1|CLPP_GEOSW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239808574|gb|ACS25639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. WCH70]
Length = 196
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D RI++ TG+ E +++D DRD +M+ +A EYGIID V+ R
Sbjct: 133 ATEIEIAAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYGIIDRVLTR 192
>gi|168018159|ref|XP_001761614.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687298|gb|EDQ73682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 303
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L ++RI+ G +DD +A+ I++QLL LDA DP +DI ++VNSPGGS++A MAI+D ++
Sbjct: 113 LFQQRIIRCGGAVDDDMANLIVAQLLYLDAADPDRDIVMYVNSPGGSVTAGMAIFDTMRH 172
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GGTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 173 IRPDVSTVCVGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQTDIEIQANEI 232
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +E++ +D DRD +MS EA EYG+ID VI + + L P+P
Sbjct: 233 LHHKANLNGYLAYHTGQPYEKIVQDTDRDFFMSAKEAQEYGLIDAVIS-NPLKALRPLP 290
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+F+G+ IDD +A+ I++Q L L+++DP KDI ++
Sbjct: 5 PMVVEQSNRGERAYDIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPEKDISFYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG ++A MAIYD +Q ++ DV+TV +G +AS +L+L GTKGKRFA+PN+R+MIHQ
Sbjct: 65 NSPGGVVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFALPNSRIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D++IQA EI+ KD I+S TG+ E+V D +RD +MS EA++YG
Sbjct: 125 PLGGTQGQATDIKIQANEILRMKDILNEILSTHTGQDIEKVSADTERDFFMSATEAMKYG 184
Query: 246 IIDGVI 251
I+D V+
Sbjct: 185 IVDKVV 190
>gi|311069969|ref|YP_003974892.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|398308397|ref|ZP_10511871.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mojavensis
RO-H-1]
gi|419821657|ref|ZP_14345250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
gi|310870486|gb|ADP33961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|388474293|gb|EIM11023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
Length = 198
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID V+ R
Sbjct: 133 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAMEYGLIDKVLTR 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
Length = 194
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I++ TG+S E+++KD DRD ++S EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYG 184
Query: 246 IIDGVI 251
++D V+
Sbjct: 185 LVDQVM 190
>gi|335047467|ref|ZP_08540488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
gi|333761275|gb|EGL38830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
Length = 192
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 130/173 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +AD I++QLL L+++DP KDI++++NSPGGS+SA +AIY
Sbjct: 19 DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPGGSVSAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRFA+PN +MIHQP+GGA GQ D++I
Sbjct: 79 DTIQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGAQGQAEDIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
QA++I+ + +I++ TG+S ++++KD DRD YMS EA EYGIID VI+
Sbjct: 139 QAQKILQVRATLNQILAKRTGQSLKKIEKDTDRDFYMSAYEAKEYGIIDEVIE 191
>gi|333394283|ref|ZP_08476102.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
gi|336393658|ref|ZP_08575057.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
coryniformis subsp. torquens KCTC 3535]
gi|420146066|ref|ZP_14653505.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Lactobacillus coryniformis subsp. coryniformis CECT
5711]
gi|398402233|gb|EJN55599.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Lactobacillus coryniformis subsp. coryniformis CECT
5711]
Length = 193
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 135/186 (72%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L ++D +A++II+QLL LDAQD KDI +++
Sbjct: 4 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGEVNDQMANSIIAQLLFLDAQDSEKDISIYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA +AIYD + V++D+ T+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGSVSAGLAIYDTMNFVKSDIQTIAMGMAASMASVLLTAGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AREI+ ++ +I++ +G+ E +QKD DRD Y++ EA +YG
Sbjct: 124 PLGGAQGQQTEIEIAAREILKTRNRLNKILAESSGQDLETIQKDTDRDHYLTAQEAKDYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDDIM 189
>gi|16804506|ref|NP_465991.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes EGD-e]
gi|46908640|ref|YP_015029.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 4b str. F2365]
gi|47092754|ref|ZP_00230539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 4b H7858]
gi|47096060|ref|ZP_00233661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 1/2a F6854]
gi|226225016|ref|YP_002759123.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|254825410|ref|ZP_05230411.1| protease ClpP [Listeria monocytogenes FSL J1-194]
gi|254828043|ref|ZP_05232730.1| ATP-dependent Clp protease [Listeria monocytogenes FSL N3-165]
gi|254853529|ref|ZP_05242877.1| endopeptidase Clp [Listeria monocytogenes FSL R2-503]
gi|254913367|ref|ZP_05263379.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J2818]
gi|254932291|ref|ZP_05265650.1| endopeptidase Clp [Listeria monocytogenes HPB2262]
gi|254937748|ref|ZP_05269445.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes F6900]
gi|254991680|ref|ZP_05273870.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-064]
gi|255521328|ref|ZP_05388565.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-175]
gi|284802906|ref|YP_003414771.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5578]
gi|284996047|ref|YP_003417815.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5923]
gi|300765033|ref|ZP_07075021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes FSL N1-017]
gi|386044770|ref|YP_005963575.1| Clp protease [Listeria monocytogenes 10403S]
gi|386048134|ref|YP_005966466.1| Clp protease [Listeria monocytogenes J0161]
gi|386051439|ref|YP_005969430.1| protease ClpP [Listeria monocytogenes FSL R2-561]
gi|386054657|ref|YP_005972215.1| clp protease [Listeria monocytogenes Finland 1998]
gi|386733152|ref|YP_006206648.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 07PF0776]
gi|404282024|ref|YP_006682922.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2755]
gi|404284960|ref|YP_006685857.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2372]
gi|404287838|ref|YP_006694424.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|404411709|ref|YP_006697297.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC5850]
gi|404414485|ref|YP_006700072.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC7179]
gi|405750812|ref|YP_006674278.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes ATCC 19117]
gi|405753675|ref|YP_006677140.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2378]
gi|405756580|ref|YP_006680044.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2540]
gi|405759516|ref|YP_006688792.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2479]
gi|406705203|ref|YP_006755557.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L312]
gi|417316253|ref|ZP_12102905.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J1816]
gi|417318464|ref|ZP_12105045.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J1-220]
gi|424715281|ref|YP_007015996.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 4b str. LL195]
gi|424824218|ref|ZP_18249231.1| ATP-dependent Clp protease [Listeria monocytogenes str. Scott A]
gi|17374630|sp|Q9RQI6.1|CLPP_LISMO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389670|sp|Q71WV9.1|CLPP_LISMF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|6166251|gb|AAF04744.1|AF102775_1 protease ClpP [Listeria monocytogenes]
gi|16411956|emb|CAD00546.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes EGD-e]
gi|46881912|gb|AAT05206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes serotype 4b str. F2365]
gi|47015521|gb|EAL06453.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 1/2a F6854]
gi|47018842|gb|EAL09590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 4b H7858]
gi|225877478|emb|CAS06192.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258600427|gb|EEW13752.1| ATP-dependent Clp protease [Listeria monocytogenes FSL N3-165]
gi|258606902|gb|EEW19510.1| endopeptidase Clp [Listeria monocytogenes FSL R2-503]
gi|258610351|gb|EEW22959.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes F6900]
gi|284058468|gb|ADB69409.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5578]
gi|284061514|gb|ADB72453.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5923]
gi|293583848|gb|EFF95880.1| endopeptidase Clp [Listeria monocytogenes HPB2262]
gi|293591373|gb|EFF99707.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J2818]
gi|293594653|gb|EFG02414.1| protease ClpP [Listeria monocytogenes FSL J1-194]
gi|300514333|gb|EFK41392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes FSL N1-017]
gi|328465333|gb|EGF36590.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J1816]
gi|328471278|gb|EGF42178.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J1-220]
gi|332312898|gb|EGJ25993.1| ATP-dependent Clp protease [Listeria monocytogenes str. Scott A]
gi|345535125|gb|AEO04566.1| Clp protease [Listeria monocytogenes J0161]
gi|345538004|gb|AEO07444.1| Clp protease [Listeria monocytogenes 10403S]
gi|346425285|gb|AEO26810.1| protease ClpP [Listeria monocytogenes FSL R2-561]
gi|346647308|gb|AEO39933.1| clp protease [Listeria monocytogenes Finland 1998]
gi|384391910|gb|AFH80980.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 07PF0776]
gi|404220012|emb|CBY71376.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes ATCC 19117]
gi|404222875|emb|CBY74238.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2378]
gi|404225780|emb|CBY77142.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2540]
gi|404228659|emb|CBY50064.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2755]
gi|404231535|emb|CBY52939.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC5850]
gi|404234462|emb|CBY55865.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2372]
gi|404237398|emb|CBY58800.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2479]
gi|404240184|emb|CBY61585.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC7179]
gi|404246767|emb|CBY04992.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406362233|emb|CBY68506.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L312]
gi|424014465|emb|CCO65005.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 4b str. LL195]
gi|441472246|emb|CCQ22001.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|441475388|emb|CCQ25142.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes N53-1]
Length = 198
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 134/187 (71%), Gaps = 5/187 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG A D LL++RIV LG IDD VA+ I++QLL L+AQDP KDI +++N
Sbjct: 15 QTP----RGERAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYIN 70
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS++A MAIYD +Q ++ DV T+ +G +AS A+++L G KGKR+++P++R+MIHQP
Sbjct: 71 SPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPHSRIMIHQP 130
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
MGG SGQ D+ I A EI K II+ TG+ +V++D++RD +MS EA+EYGI
Sbjct: 131 MGGISGQATDIIIHAEEIKRIKHMLNEIIAKHTGQPLSKVEQDVERDYFMSAYEAMEYGI 190
Query: 247 IDGVIDR 253
+D VI++
Sbjct: 191 VDKVIEK 197
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 131/172 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+I+Q+L L+A+DP KDI L++NSPGG ++A MAIYD +Q
Sbjct: 23 LLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +++L GTKGKR+A+P+ R+MIHQP+GG GQ ++EI AREI
Sbjct: 83 IKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQPLGGVQGQASEIEIHAREI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ ++ I++ +G+ E V +D DRD +MS +AVEYG+ID V+ R+S+
Sbjct: 143 LRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVLTRESV 194
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG ID +A+ I++Q+L LDA+DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKKRLNDFLAEHTGQPIERIAEDTERDFFMSPDEAREYGLIDQVIDR 190
Query: 254 DS 255
S
Sbjct: 191 HS 192
>gi|315304656|ref|ZP_07874875.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Listeria ivanovii FSL F6-596]
gi|313626974|gb|EFR95888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
ivanovii FSL F6-596]
Length = 191
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|186475776|ref|YP_001857246.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
phymatum STM815]
gi|390571699|ref|ZP_10251936.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia terrae
BS001]
gi|420250357|ref|ZP_14753576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. BT03]
gi|184192235|gb|ACC70200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phymatum STM815]
gi|389936313|gb|EIM98204.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia terrae
BS001]
gi|398061216|gb|EJL53014.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. BT03]
Length = 219
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 140/204 (68%), Gaps = 4/204 (1%)
Query: 54 QQQRQHDV---PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQL 109
Q R D+ L P T+ RG + D LLKER+VFL ++D A+ +I+QL
Sbjct: 14 QSSRDRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERVVFLVGEVNDQTANLVIAQL 73
Query: 110 LLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGT 169
L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G
Sbjct: 74 LFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGA 133
Query: 170 KGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKD 229
KGKRFA+PN RVMIHQP+GGA GQ D+EIQAREI++ K+ +++S TG+ E++Q+D
Sbjct: 134 KGKRFALPNARVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLSHHTGQPVERIQRD 193
Query: 230 IDRDRYMSPIEAVEYGIIDGVIDR 253
DRD +MS +A YG++D V+ +
Sbjct: 194 TDRDNFMSGDDAQAYGLVDQVLHK 217
>gi|399520089|ref|ZP_10760870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111981|emb|CCH37429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 213
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ADVST +G + S + +L GG KGKRF +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI+ ++ +++ TG+S E +++D +RD +MS AVEYG
Sbjct: 141 PLGGFQGQASDIEIHAKEILFIRERLNELLAQHTGQSLETIERDTNRDNFMSASRAVEYG 200
Query: 246 IIDGVIDR 253
++D V ++
Sbjct: 201 LVDAVHEK 208
>gi|407981209|ref|ZP_11161953.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
gi|407411926|gb|EKF33805.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
Length = 198
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D +++S TG+ E +++D DRD + + EA+EYG+ID V+ R
Sbjct: 133 ATEIEIAAKRILSLRDKLNQVLSERTGQPIEVIERDTDRDNFKTAEEALEYGLIDKVLTR 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|255071043|ref|XP_002507603.1| predicted protein [Micromonas sp. RCC299]
gi|226522878|gb|ACO68861.1| predicted protein [Micromonas sp. RCC299]
Length = 272
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 129/182 (70%), Gaps = 7/182 (3%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L+ +RI+ LG +DD + I++QLL LDA DP KDI L+VNSPGGS++A MA++D ++
Sbjct: 86 LMNQRIIRLGGAVDDDSCNLIVAQLLWLDATDPKKDITLYVNSPGGSVTAGMAVFDTMRH 145
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR D+STV +G++AS + +L G +GKRF++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 146 VRPDISTVCVGLAASMGAFLLASGQQGKRFSLPNSRIMIHQPLGGAQGQAADIEIQANEI 205
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-------RDSII 257
MH+K ++ FTG+ + V +D DRD +MS EA EYG+ID VI+ R S I
Sbjct: 206 MHHKSTLNGYLAEFTGKPLDTVMQDTDRDFFMSAFEAKEYGLIDSVIEHPTDVAVRSSGI 265
Query: 258 PL 259
P+
Sbjct: 266 PM 267
>gi|154494362|ref|ZP_02033682.1| hypothetical protein PARMER_03717 [Parabacteroides merdae ATCC
43184]
gi|423346933|ref|ZP_17324620.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
merdae CL03T12C32]
gi|423725453|ref|ZP_17699590.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
merdae CL09T00C40]
gi|154085806|gb|EDN84851.1| endopeptidase Clp [Parabacteroides merdae ATCC 43184]
gi|409218594|gb|EKN11562.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
merdae CL03T12C32]
gi|409234577|gb|EKN27405.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
merdae CL09T00C40]
Length = 221
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPAT----AMRGAEADAMGLLLKERIVFLGNNID 98
R+ +TK L + + ++S+ +P + A+ D L+ +RI+FLG +D
Sbjct: 5 RKYATKHLGMNSNALDSYMNITSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVD 64
Query: 99 DFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSA 158
D+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + +DVST+ GM+A
Sbjct: 65 DYTANVIQAQLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFISSDVSTICTGMAA 124
Query: 159 STASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGF 218
S A+++L GTKGKR A+P++RVMIHQP+GGA GQ D+EI AREI+ K IIS
Sbjct: 125 SFAAVLLVAGTKGKRMALPHSRVMIHQPLGGAQGQASDIEITAREILKVKKELYTIISTH 184
Query: 219 TGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+G+ +E+V+ D DRD +M+ EA+ YG+ID V+ R+
Sbjct: 185 SGQPYEKVEHDSDRDYWMTAEEALAYGMIDKVLVRN 220
>gi|383317431|ref|YP_005378273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
gi|379044535|gb|AFC86591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
Length = 209
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P RG + D LLKER++FL ++D VA+ +I+Q+L L++++P KDI
Sbjct: 9 LNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANVLIAQMLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A +AIYD +Q ++ DVST+ +G + S ASL+L G KGKRF++PN+RV
Sbjct: 69 HLYINSPGGVVTAGLAIYDTMQYIKCDVSTMCVGQACSAASLLLMAGAKGKRFSLPNSRV 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EIQA+EI++ + +I TG+ E++++D++RDR+MS A
Sbjct: 129 MIHQPSGGARGQATDIEIQAQEILYLRRKLNQIYVDHTGQPLEKIERDMERDRFMSAETA 188
Query: 242 VEYGIIDGVIDR 253
EYG+ID V+DR
Sbjct: 189 KEYGLIDEVLDR 200
>gi|347549771|ref|YP_004856099.1| ATP-dependent Clp protease proteolytic subunit [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982842|emb|CBW86873.1| Putative ATP-dependent Clp protease proteolytic subunit [Listeria
ivanovii subsp. ivanovii PAM 55]
Length = 198
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|289435727|ref|YP_003465599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171971|emb|CBH28517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 198
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMADKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDEII 190
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 122/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+ LG IDD +A+ I++QLL L A+DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 23 LLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDISLYINSPGGSVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L G KGKRFA+PN VMIHQP+GG GQ D+ I A I
Sbjct: 83 IKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGVRGQAEDIRIHAEWI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
M K I+S TG+ +E+V++D DRD +MS EA YG+ID +I+R
Sbjct: 143 MKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAKAYGLIDSIIER 191
>gi|428777917|ref|YP_007169704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428692196|gb|AFZ45490.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 228
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 127/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD +AD++ +Q+L L+A+DP KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 49 LLRERIIFLGTPVDDQIADSVAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIYDTMQQ 108
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G++AS + +L GG GKR ++ N+R+MIHQP+GGA GQ D+EIQAREI
Sbjct: 109 IQPDVATICYGLAASMGAFLLAGGAAGKRMSLTNSRIMIHQPLGGAQGQAADIEIQAREI 168
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ K+ +++ TG+ +++ +D DRD YMS EA EYG+ID VI
Sbjct: 169 LYIKNTLNELLAYHTGQPLDRIAEDTDRDFYMSATEAQEYGLIDQVI 215
>gi|326790230|ref|YP_004308051.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
lentocellum DSM 5427]
gi|326540994|gb|ADZ82853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
lentocellum DSM 5427]
Length = 193
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+ LG+ +++ A+ I++QLL L+A+DP KDI
Sbjct: 1 MSLVPMVIEQTNRGERSYDIYSRLLKDRIIILGDEVNNVTANLIVAQLLFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS++ MAIYD +Q ++ DVST+ +GM+AS + +L GGTKGKRFA+PN V
Sbjct: 61 MFYINSPGGSITDGMAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGTKGKRFALPNAEV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D++I A+ I+ K+ R++S FTG+ E++ D++RD + + EA
Sbjct: 121 MIHQPLGGAKGQATDIQITAQHIIKTKERMNRMLSEFTGQPIERINNDVERDNWKTAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID +I
Sbjct: 181 KEYGLIDDII 190
>gi|336249036|ref|YP_004592746.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|365104949|ref|ZP_09334341.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|375259344|ref|YP_005018514.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|395228096|ref|ZP_10406420.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|397656325|ref|YP_006497027.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|402843112|ref|ZP_10891514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|420370111|ref|ZP_14870727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|421843723|ref|ZP_16276883.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|423101608|ref|ZP_17089310.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|423106996|ref|ZP_17094691.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|423112881|ref|ZP_17100572.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|423127775|ref|ZP_17115454.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|424730593|ref|ZP_18159188.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440288751|ref|YP_007341516.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|334735092|gb|AEG97467.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|363643890|gb|EHL83194.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|365908822|gb|AEX04275.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|376389122|gb|EHT01814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|376390375|gb|EHT03061.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|376391396|gb|EHT04075.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|376394814|gb|EHT07464.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|391320540|gb|EIQ77372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|394344931|gb|AFN31052.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|394718218|gb|EJF23855.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|402277743|gb|EJU26811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|411775444|gb|EKS58890.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422894786|gb|EKU34593.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440048273|gb|AGB79331.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|455641803|gb|EMF20974.1| hypothetical protein H262_21028 [Citrobacter freundii GTC 09479]
Length = 207
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 136/188 (72%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LL++RI+FLG +DD +A+ I++Q+L L+++DP KDI L++
Sbjct: 3 PTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+ A MAIYD +Q ++ DVST+ +G++AS + +L GG KGKR A+P+ R+MIHQ
Sbjct: 63 NSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA G D+EIQA+EI+ K++ +++ TG+ E++++D DRD +M+P +A EYG
Sbjct: 123 PLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYG 182
Query: 246 IIDGVIDR 253
+ID VI R
Sbjct: 183 LIDQVITR 190
>gi|255548433|ref|XP_002515273.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223545753|gb|EEF47257.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 305
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 158/259 (61%), Gaps = 34/259 (13%)
Query: 27 SKSLPLSFKPISSVKTRRIST----------------KTLALQQQQRQ------HDVPLS 64
S L L F+P+ S K R++S+ + A ++ RQ D+ +
Sbjct: 30 SHKLSLPFEPLRSRKFRKLSSIRKNSQPSSAKAVYSGQFWAPEKTSRQGIWSIRDDLEIP 89
Query: 65 SAPQTPATAMRGAEADA------------MGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
S+P PA A +A + L + RI+ G +DD +A+ I++QLL L
Sbjct: 90 SSPYFPAYANGQGQAQGPPPMVHERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYL 149
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
DA DP KDI ++VNSPGGS++A MAI+D ++ +R DVSTV +G++AS + +L GTKGK
Sbjct: 150 DAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 209
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
R+++PN+R+MIHQP+GGA G D++IQA E++H+K N ++ TG+S E++ +D DR
Sbjct: 210 RYSLPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDR 269
Query: 233 DRYMSPIEAVEYGIIDGVI 251
D +MS EA +YG+IDGVI
Sbjct: 270 DYFMSAKEATDYGLIDGVI 288
>gi|218262313|ref|ZP_03476827.1| hypothetical protein PRABACTJOHN_02501 [Parabacteroides johnsonii
DSM 18315]
gi|423343076|ref|ZP_17320790.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
johnsonii CL02T12C29]
gi|218223464|gb|EEC96114.1| hypothetical protein PRABACTJOHN_02501 [Parabacteroides johnsonii
DSM 18315]
gi|409216752|gb|EKN09735.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
johnsonii CL02T12C29]
Length = 221
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPAT----AMRGAEADAMGLLLKERIVFLGNNID 98
R+ +TK L + + ++S+ +P + A+ D L+ +RI+FLG +D
Sbjct: 5 RKYATKHLGMNSNALDSYMNITSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVD 64
Query: 99 DFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSA 158
D+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + +DVST+ GM+A
Sbjct: 65 DYTANVIQAQLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFISSDVSTICTGMAA 124
Query: 159 STASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGF 218
S A+++L GTKGKR A+P++RVMIHQP+GGA GQ D+EI AREI+ K IIS
Sbjct: 125 SFAAVLLVAGTKGKRMALPHSRVMIHQPLGGAQGQASDIEITAREILKVKKELYTIISTH 184
Query: 219 TGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+G+ +E+V+ D DRD +M+ EA+ YG+ID V+ R+
Sbjct: 185 SGQPYEKVEHDSDRDYWMTAEEALTYGMIDKVLVRN 220
>gi|381405442|ref|ZP_09930126.1| ClpP [Pantoea sp. Sc1]
gi|380738641|gb|EIB99704.1| ClpP [Pantoea sp. Sc1]
Length = 207
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVPLSS-APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R++ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REYTAPHNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG+S E++++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSASEAVEYGLVDSIL 203
>gi|16801674|ref|NP_471942.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|422416950|ref|ZP_16493907.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL J1-023]
gi|423100882|ref|ZP_17088588.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Listeria
innocua ATCC 33091]
gi|20137847|sp|Q928C4.1|CLPP_LISIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16415149|emb|CAC97839.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|313622455|gb|EFR92900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL J1-023]
gi|370792688|gb|EHN60544.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Listeria
innocua ATCC 33091]
Length = 198
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|422420028|ref|ZP_16496983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL N1-067]
gi|422423177|ref|ZP_16500130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL S4-171]
gi|313632032|gb|EFR99140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL N1-067]
gi|313636395|gb|EFS02167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL S4-171]
Length = 198
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMADKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754.1|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 133/173 (76%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG IDD VA+ +++QLL L+A+DP KDI+L++NSPGGS++A +AIY
Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIY 82
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV T+ +G +AS A+++L GTKGKRFA+PN R+M+HQP+GGA G V DVEI
Sbjct: 83 DTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEI 142
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+E++ K+ I+S TG+ ++++KD DRD +MS EA++YG++D VI+
Sbjct: 143 ITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIE 195
>gi|148244363|ref|YP_001219057.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Vesicomyosocius okutanii HA]
gi|166214721|sp|A5CXJ8.1|CLPP_VESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146326190|dbj|BAF61333.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Vesicomyosocius okutanii HA]
Length = 198
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P + RG A D LLKERI+FL I+D++A+ +++QLL L++++P KDI
Sbjct: 6 LNQIPIVVEQSARGERAYDIYSRLLKERIIFLVGPIEDYMANVVVAQLLFLESENPDKDI 65
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AIYD +Q +++D+ST+ +G +AS +L+L GTKGKRFA+PN R
Sbjct: 66 HLYINSPGGSVSAGLAIYDTMQFIKSDISTLCIGQAASMGALLLTAGTKGKRFALPNVRC 125
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG SGQ DV+I A+EI+ + N +I TG+ + +QKD DRD +MS EA
Sbjct: 126 MIHQPLGGFSGQASDVDIHAQEILKVRANLNQIFKLHTGQVIKTIQKDTDRDNFMSADEA 185
Query: 242 VEYGIIDGVIDR 253
+YG+ID V+ +
Sbjct: 186 TKYGLIDKVLAK 197
>gi|434388321|ref|YP_007098932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428019311|gb|AFY95405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 215
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 129/169 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG ++D VAD +++Q+L L+A+DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 46 LLRERIIFLGGEVNDGVADTLVAQMLFLEAEDPEKDIQLYINSPGGSITAGMAIYDTMQQ 105
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV+T G++AS + +L G GKR ++PN+R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 106 IRPDVATTCYGLAASMGAFLLASGAPGKRRSLPNSRIMIHQPLGGAQGQAVDIEIQAREI 165
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++ K++ +++ TG+ E++ +D +RD +MSP E YG+ID I+R
Sbjct: 166 LYLKNHLNGLLAYHTGQPIERIAEDTERDFWMSPAETQAYGLIDETIER 214
>gi|417644372|ref|ZP_12294370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus warneri VCU121]
gi|445060249|ref|YP_007385653.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
gi|330684877|gb|EGG96562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU121]
gi|443426306|gb|AGC91209.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
Length = 196
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 129/187 (68%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKR+A+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI S TG+S E++Q+D DRD +++ EA YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRIFSERTGQSIEKIQQDTDRDNFLTAEEAKAYG 184
Query: 246 IIDGVID 252
++D V++
Sbjct: 185 LVDEVME 191
>gi|154687585|ref|YP_001422746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens FZB42]
gi|308175199|ref|YP_003921904.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|375363903|ref|YP_005131942.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384161083|ref|YP_005543156.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|384165974|ref|YP_005547353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|384170169|ref|YP_005551547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|384266990|ref|YP_005422697.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385266358|ref|ZP_10044445.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387900080|ref|YP_006330376.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|394991001|ref|ZP_10383811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|421730139|ref|ZP_16169268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429506759|ref|YP_007187943.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451345383|ref|YP_007444014.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452857085|ref|YP_007498768.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166201799|sp|A7Z939.1|CLPP_BACA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154353436|gb|ABS75515.1| ClpP [Bacillus amyloliquefaciens FZB42]
gi|307608063|emb|CBI44434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|328555171|gb|AEB25663.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|328913529|gb|AEB65125.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|341829448|gb|AEK90699.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|371569897|emb|CCF06747.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380500343|emb|CCG51381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385150854|gb|EIF14791.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387174190|gb|AFJ63651.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|393808148|gb|EJD69457.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|407076105|gb|EKE49089.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429488349|gb|AFZ92273.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449849141|gb|AGF26133.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452081345|emb|CCP23112.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 198
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID V+ R
Sbjct: 133 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVLTR 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|393199477|ref|YP_006461319.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|406666669|ref|ZP_11074434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus isronensis
B3W22]
gi|327438808|dbj|BAK15173.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|405385439|gb|EKB44873.1| ATP-dependent Clp protease proteolytic subunit [Bacillus isronensis
B3W22]
Length = 196
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 134/183 (73%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I++QLL L+A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIILLGSGIDDNVANSIVAQLLFLEAEDPDKDIYLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ MAIYD + ++ DVST+ +GM+AS + +L G KGKR ++PN VMIHQP+GGA GQ
Sbjct: 73 SGMAIYDTMNFIKPDVSTICIGMAASMGAFLLSAGAKGKRVSLPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+H ++ RI++ +G+ +E + +D DRD +MS +A+EYG+ID + +R
Sbjct: 133 ATEIEIAAKRILHLREKLNRIMAENSGQDYETLARDTDRDNFMSAEQALEYGLIDKIYER 192
Query: 254 DSI 256
+ +
Sbjct: 193 NQL 195
>gi|146310565|ref|YP_001175639.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
638]
gi|145317441|gb|ABP59588.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterobacter
sp. 638]
Length = 207
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|93278470|pdb|1YG8|A Chain A, The Structure Of A V6a Variant Of Clpp.
gi|93278471|pdb|1YG8|B Chain B, The Structure Of A V6a Variant Of Clpp.
gi|93278472|pdb|1YG8|C Chain C, The Structure Of A V6a Variant Of Clpp.
gi|93278473|pdb|1YG8|D Chain D, The Structure Of A V6a Variant Of Clpp.
gi|93278474|pdb|1YG8|E Chain E, The Structure Of A V6a Variant Of Clpp.
gi|93278475|pdb|1YG8|F Chain F, The Structure Of A V6a Variant Of Clpp.
gi|93278476|pdb|1YG8|G Chain G, The Structure Of A V6a Variant Of Clpp.
gi|93278477|pdb|1YG8|H Chain H, The Structure Of A V6a Variant Of Clpp.
gi|93278478|pdb|1YG8|I Chain I, The Structure Of A V6a Variant Of Clpp.
gi|93278479|pdb|1YG8|J Chain J, The Structure Of A V6a Variant Of Clpp.
gi|93278480|pdb|1YG8|K Chain K, The Structure Of A V6a Variant Of Clpp.
gi|93278481|pdb|1YG8|L Chain L, The Structure Of A V6a Variant Of Clpp.
gi|93278482|pdb|1YG8|M Chain M, The Structure Of A V6a Variant Of Clpp.
gi|93278483|pdb|1YG8|N Chain N, The Structure Of A V6a Variant Of Clpp.
gi|93278484|pdb|1YG8|O Chain O, The Structure Of A V6a Variant Of Clpp.
gi|93278485|pdb|1YG8|P Chain P, The Structure Of A V6a Variant Of Clpp.
gi|93278486|pdb|1YG8|Q Chain Q, The Structure Of A V6a Variant Of Clpp.
gi|93278487|pdb|1YG8|R Chain R, The Structure Of A V6a Variant Of Clpp.
gi|93278488|pdb|1YG8|S Chain S, The Structure Of A V6a Variant Of Clpp.
gi|93278489|pdb|1YG8|T Chain T, The Structure Of A V6a Variant Of Clpp.
gi|93278490|pdb|1YG8|U Chain U, The Structure Of A V6a Variant Of Clpp.
gi|93278491|pdb|1YG8|V Chain V, The Structure Of A V6a Variant Of Clpp.
gi|93278492|pdb|1YG8|W Chain W, The Structure Of A V6a Variant Of Clpp.
gi|93278493|pdb|1YG8|X Chain X, The Structure Of A V6a Variant Of Clpp.
gi|93278494|pdb|1YG8|Y Chain Y, The Structure Of A V6a Variant Of Clpp.
gi|93278495|pdb|1YG8|Z Chain Z, The Structure Of A V6a Variant Of Clpp.
gi|93278496|pdb|1YG8|AA Chain a, The Structure Of A V6a Variant Of Clpp.
gi|93278497|pdb|1YG8|BB Chain b, The Structure Of A V6a Variant Of Clpp
Length = 193
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
Query: 66 APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 124
AP RG + D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L+
Sbjct: 3 APMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 62
Query: 125 VNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIH 184
+NSPGG ++A M+IYD +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIH
Sbjct: 63 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 122
Query: 185 QPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
QP+GG GQ D+EI AREI+ K +++ TG+S EQ+++D +RDR++S EAVEY
Sbjct: 123 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 182
Query: 245 GIIDGVI 251
G++D ++
Sbjct: 183 GLVDSIL 189
>gi|237730414|ref|ZP_04560895.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905953|gb|EEH91871.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 243
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|153814157|ref|ZP_01966825.1| hypothetical protein RUMTOR_00366 [Ruminococcus torques ATCC 27756]
gi|317499957|ref|ZP_07958193.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331087820|ref|ZP_08336745.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336438243|ref|ZP_08617883.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_1_57FAA]
gi|145848553|gb|EDK25471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus torques ATCC 27756]
gi|316898674|gb|EFV20709.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330409515|gb|EGG88956.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336014049|gb|EGN43912.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_1_57FAA]
Length = 193
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 121/169 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG ++D A I++QLL L+A DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDIQLYINSPGGSVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVSTV +GM+AS + +L GG KGKRFA+PN +MIHQP GGA GQ +++I A I
Sbjct: 84 IKCDVSTVCIGMAASMGAFLLAGGKKGKRFALPNAEIMIHQPSGGAQGQATEIQIAAEHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K I++ TG+S E ++ D +RD +MS EA YG+ID VI +
Sbjct: 144 LRTKQKLNEILAANTGQSLETIKADTERDNFMSADEAKAYGLIDEVIAK 192
>gi|296330330|ref|ZP_06872811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676065|ref|YP_003867737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|398304937|ref|ZP_10508523.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
vallismortis DV1-F-3]
gi|443630850|ref|ZP_21115031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|296152598|gb|EFG93466.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414309|gb|ADM39428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|443348655|gb|ELS62711.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 198
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++ R
Sbjct: 133 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTR 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|315283588|ref|ZP_07871740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
marthii FSL S4-120]
gi|313612769|gb|EFR86759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
marthii FSL S4-120]
Length = 198
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGASGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|345298112|ref|YP_004827470.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392977875|ref|YP_006476463.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|401762532|ref|YP_006577539.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|345092049|gb|AEN63685.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392323808|gb|AFM58761.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|400174066|gb|AFP68915.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 207
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D V+
Sbjct: 152 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSVL 203
>gi|73748509|ref|YP_307748.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides sp.
CBDB1]
gi|147669290|ref|YP_001214108.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides sp.
BAV1]
gi|289432557|ref|YP_003462430.1| endopeptidase Clp [Dehalococcoides sp. GT]
gi|452203514|ref|YP_007483647.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi DCMB5]
gi|115311356|sp|Q3ZX82.1|CLPP_DEHSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082455|sp|A5FRE5.1|CLPP_DEHSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|73660225|emb|CAI82832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides sp. CBDB1]
gi|146270238|gb|ABQ17230.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Dehalococcoides sp. BAV1]
gi|288946277|gb|ADC73974.1| Endopeptidase Clp [Dehalococcoides sp. GT]
gi|452110573|gb|AGG06305.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi DCMB5]
Length = 200
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
P + P ++ RG A D LLLKERI+FLG+ I+D VA+ +I+QLL LD +DP KD
Sbjct: 4 PENVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKD 63
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
I L+++SPGG +SA +A+YD +QL+R VST+ +G++AS A+++L G KGKR+A+PN
Sbjct: 64 ISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNAT 123
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
+ +HQ MGGA GQ D+EI AREIM +D I+ TG++ E++ D DRD Y+S +
Sbjct: 124 IHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQ 183
Query: 241 AVEYGIIDGVIDR 253
AVEYG+ID ++ +
Sbjct: 184 AVEYGLIDEILQK 196
>gi|217963429|ref|YP_002349107.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes HCC23]
gi|290893656|ref|ZP_06556637.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|386009186|ref|YP_005927464.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L99]
gi|386027798|ref|YP_005948574.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes M7]
gi|404408843|ref|YP_006691558.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes SLCC2376]
gi|422810498|ref|ZP_16858909.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes FSL J1-208]
gi|217332699|gb|ACK38493.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes HCC23]
gi|290556729|gb|EFD90262.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|307571996|emb|CAR85175.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L99]
gi|336024379|gb|AEH93516.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes M7]
gi|378751388|gb|EHY61978.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes FSL J1-208]
gi|404242992|emb|CBY64392.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes SLCC2376]
Length = 198
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGASGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +YG+ID +I
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
>gi|428780533|ref|YP_007172319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428694812|gb|AFZ50962.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 217
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERIVFLG +DD +AD+I +Q+L L+A+DP KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 41 LLRERIVFLGQQVDDQIADSIAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIYDTMQQ 100
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G++AS + +L GG +GKR ++PN+R+MIHQP+GGA GQ D+EIQAREI
Sbjct: 101 IQPDVATICYGIAASMGAFLLAGGAEGKRMSLPNSRIMIHQPLGGAQGQAADIEIQAREI 160
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ K+ +++ T + E++ +D +RD YMS EA +YG+ID +I
Sbjct: 161 LYIKNTLNELLAHHTKQPLERITEDTERDFYMSATEAKDYGLIDEMI 207
>gi|339007540|ref|ZP_08640114.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|421870979|ref|ZP_16302601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|338774743|gb|EGP34272.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|372459606|emb|CCF12150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 192
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+FLG+ IDD +A+A+++QLL L++++P KDI L++
Sbjct: 4 PMVVEQTNRGERAYDIYSRLLKDRIIFLGSEIDDEIANAVVAQLLFLESEEPGKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q +++DVST+ +GM+AS +++L G KGKRFA+PN+ VMIHQ
Sbjct: 64 NSPGGSVTAGMAIYDTMQFIKSDVSTICIGMAASMGAVLLAAGAKGKRFALPNSEVMIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+ I A I+ K I++ TG+ +E + +D DRD +MS EA YG
Sbjct: 124 PLGGVRGQAEDIRIHADWIIKTKRQLNEILAERTGQPYEVIDRDTDRDNFMSAEEAKNYG 183
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 184 LIDSVIER 191
>gi|288549991|ref|ZP_05968896.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
gi|288316903|gb|EFC55841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
Length = 194
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 79 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D V+
Sbjct: 139 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSVL 190
>gi|89098789|ref|ZP_01171670.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
gi|89086465|gb|EAR65585.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
Length = 201
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD V+++I++QLL L+A++P KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R VSTV +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQYIRPKVSTVCIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ ++ +I+S TG+ E + KD DRD +M+ A+EYG+ID +I R
Sbjct: 133 ATEIEIAAKRILFLREKLNQILSERTGQPLEVIAKDTDRDNFMTAERALEYGLIDQIISR 192
Query: 254 D 254
+
Sbjct: 193 N 193
>gi|296101559|ref|YP_003611705.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056018|gb|ADF60756.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 207
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|157146946|ref|YP_001454265.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
gi|157084151|gb|ABV13829.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
Length = 243
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+ +++QLL L+A++P KDI+L++NSPGG ++A +AIYD +Q
Sbjct: 35 LLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPGGLVTAGLAIYDTMQY 94
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ DV+T+ +G +AS A+++L G KGKRFA+PN+R+MIHQP+GGA G DVEI +E+
Sbjct: 95 VKCDVATICIGQAASMAAVLLAAGAKGKRFALPNSRIMIHQPLGGAEGTAKDVEILTKEL 154
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I+S TG+ E+++KD DRD +MS EA EYGIID VI
Sbjct: 155 LRIKHLINEILSKHTGQPIEKIEKDTDRDFFMSAQEAKEYGIIDRVI 201
>gi|312109546|ref|YP_003987862.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|336233940|ref|YP_004586556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718668|ref|ZP_17692850.1| ATP-dependent clp protease, proteolytic subunit clpP [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214647|gb|ADP73251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|335360795|gb|AEH46475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368270|gb|EID45543.1| ATP-dependent clp protease, proteolytic subunit clpP [Geobacillus
thermoglucosidans TNO-09.020]
Length = 196
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D RI+S TG+ + +++D DRD +M+ +A EYGIID V+ R
Sbjct: 133 ATEIEIAAKRILFLRDKLNRILSENTGQPIDVIERDTDRDNFMTAQKAQEYGIIDRVLTR 192
>gi|437919283|ref|ZP_20850674.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435313922|gb|ELO87441.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
Length = 220
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 45 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 104
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 105 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 164
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 165 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 216
>gi|436653600|ref|ZP_20516817.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|435025338|gb|ELM15494.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
Length = 225
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 50 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 109
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 110 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 169
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 170 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 221
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL LDA+DP KDI L++NSPGGS++
Sbjct: 12 RGERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 72 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA +YG+ID VIDR
Sbjct: 132 ATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDR 191
Query: 254 DS 255
+
Sbjct: 192 HA 193
>gi|386824461|ref|ZP_10111596.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
gi|386378672|gb|EIJ19474.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
Length = 207
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S S +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG++ EQ+++D +RDR+M+ EAVEYG++DG++ S
Sbjct: 152 HAREILKVKARMNELMAEHTGQTLEQIERDTERDRFMTAEEAVEYGLVDGILTHRS 207
>gi|418511864|ref|ZP_13078112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366084181|gb|EHN48092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
Length = 207
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|312796430|ref|YP_004029352.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Burkholderia rhizoxinica HKI 454]
gi|312168205|emb|CBW75208.1| ATP-dependent endopeptidase clp proteolytic subunit clpP (EC
3.4.21.92) [Burkholderia rhizoxinica HKI 454]
Length = 238
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LLKER+VFL ++D A+ +++QLL L++++P KDI
Sbjct: 45 LGLVPMVVETSGRGERAYDIYSRLLKERLVFLVGEVNDQAANLVVAQLLFLESENPDKDI 104
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q ++ DV+T+ +G++AS + +L G KGKR A+PN RV
Sbjct: 105 SLYINSPGGSVSAGMAIYDTMQFIKPDVTTLCMGLAASMGAFLLAAGAKGKRIALPNARV 164
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI+ K+ +++ TG+ EQ+Q+D DRD +MS +A
Sbjct: 165 MIHQPLGGARGQASDIEIQAREILFLKERLNNLLAQHTGQPVEQIQRDTDRDNFMSAEDA 224
Query: 242 VEYGIIDGVIDR 253
YG+ID V+ +
Sbjct: 225 QAYGLIDQVLHK 236
>gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
cytotoxicus NVH 391-98]
gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 193
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ +VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ +D +I++ TG+ E +++D DRD +M+ +A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLRDKLNKILAERTGQPLEVIERDTDRDNFMTAEKALEYGLIDRI 189
>gi|291616549|ref|YP_003519291.1| ClpP [Pantoea ananatis LMG 20103]
gi|386014922|ref|YP_005933199.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
gi|291151579|gb|ADD76163.1| ClpP [Pantoea ananatis LMG 20103]
gi|327392981|dbj|BAK10403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
Length = 218
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 43 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 102
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 103 DTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 162
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S E++++D +RDR++S EAVEYG++D ++
Sbjct: 163 HAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSASEAVEYGLVDSIL 214
>gi|374314210|ref|YP_005060639.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Serratia symbiotica str.
'Cinara cedri']
gi|363988436|gb|AEW44627.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Serratia symbiotica str.
'Cinara cedri']
Length = 211
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 128/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLIGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q + ++VST+ +G + S SL+L GTKGKRF + N+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFITSNVSTICIGQACSMGSLLLTAGTKGKRFCLSNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K T +++ TG+S +++ D +RDR+M+ EAVEYG++DG++ S
Sbjct: 152 HAREILKVKARMTELMAEHTGKSLAEIEYDTERDRFMTATEAVEYGLVDGILTHRS 207
>gi|205351759|ref|YP_002225560.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|445132409|ref|ZP_21382196.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205271540|emb|CAR36358.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|444849097|gb|ELX74214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 207
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q
Sbjct: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI AREI
Sbjct: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 157 LKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|168004996|ref|XP_001755197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693790|gb|EDQ80141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 251
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L ++RI+ G +DD +A+ I++QLL LDA DP +DI ++VNSPGGS++A MAI+D ++
Sbjct: 61 LFQQRIIRCGGAVDDDMANLIVAQLLYLDAADPNRDIVMYVNSPGGSVTAGMAIFDTMRH 120
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GGTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 121 IRPDVSTVCVGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQTDIEIQANEI 180
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +E++ +D DRD +MS EA EYG+ID VI + + L P+P
Sbjct: 181 LHHKANLNGYLAYHTGQPYEKIVQDTDRDFFMSAKEAQEYGLIDAVIS-NPLKALRPLP 238
>gi|406671266|ref|ZP_11078505.1| ATP-dependent Clp protease proteolytic subunit [Facklamia hominis
CCUG 36813]
gi|405580516|gb|EKB54575.1| ATP-dependent Clp protease proteolytic subunit [Facklamia hominis
CCUG 36813]
Length = 200
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L ++D +A+A+I+QLL LDAQDP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLSGQVEDNMANAVIAQLLFLDAQDPDKDIYLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AI+D + ++ADV T+ +G++AS S++L GTKGKR+A+PN +MIHQP+GGA GQ
Sbjct: 73 AGLAIFDTMNFIKADVQTIVIGLAASMGSVLLAAGTKGKRYALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++EI AR I+ + +I+S TG+ E ++KD DRD +M+ IEA EYG++D V++
Sbjct: 133 ATEIEIAARHILKTRQRLNQILSERTGQPIEVIEKDTDRDNFMTAIEAKEYGLVDDVLE 191
>gi|222150769|ref|YP_002559922.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5.1|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIESTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ RI++ TG+ E+++KD DRD +++ EA YG
Sbjct: 125 PLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|295396804|ref|ZP_06806937.1| ATP-dependent Clp protease proteolytic subunit [Aerococcus viridans
ATCC 11563]
gi|294974956|gb|EFG50650.1| ATP-dependent Clp protease proteolytic subunit [Aerococcus viridans
ATCC 11563]
Length = 198
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L +D +A++II+QLL LDAQDP KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGEFNDDLANSIIAQLLFLDAQDPDKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+++ MAIYD +Q V ADV T+ +GM+AS S I GTKGKRFA+PN ++IHQ
Sbjct: 65 NSPGGSITSGMAIYDTMQFVHADVQTIVMGMAASMGSFIAAAGTKGKRFALPNAEILIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ K+ R+ S TG+ E +++D DRD +++ EA+EYG
Sbjct: 125 PLGGAQGQATEIEIAARHILKTKEKMNRLYSEMTGQPVEVIERDTDRDNWLTAEEALEYG 184
Query: 246 IIDGVIDRD 254
++D ++ ++
Sbjct: 185 LLDQIMTKN 193
>gi|398792058|ref|ZP_10552756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
YR343]
gi|398214190|gb|EJN00773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
YR343]
Length = 207
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 136/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R+ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REFTAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG+S E++++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSASEAVEYGLVDSIL 203
>gi|188995413|ref|YP_001929665.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
gingivalis ATCC 33277]
gi|188595093|dbj|BAG34068.1| putative ATP-dependent Clp protease proteolytic subunit
[Porphyromonas gingivalis ATCC 33277]
Length = 222
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 129/178 (72%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A+ D L+ +RI+FLG IDD+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A
Sbjct: 43 AQMDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYLNSPGGSVYAGY 102
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
IYD +Q + DV+T+ GM+AS AS++L GTKGKRFA+P++RVMIHQP+GG GQ D
Sbjct: 103 GIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQASD 162
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+EI AREI+ K IIS +G+ +QV+KD DRD +M+ EA+EYG+ID +++++
Sbjct: 163 LEIAAREILRVKKELYTIISSHSGKPVKQVEKDSDRDYWMTAPEALEYGMIDKILEKN 220
>gi|239636619|ref|ZP_04677621.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
gi|239597974|gb|EEQ80469.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
Length = 196
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKR+A+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ ++ RI++ TG+S E++Q+D DRD +++ EA YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKAYG 184
Query: 246 IIDGVID 252
++D V++
Sbjct: 185 LVDEVME 191
>gi|168048812|ref|XP_001776859.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671715|gb|EDQ58262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L ++RI+ G +DD +A+ I++QLL LDA DP +DI ++VNSPGGS++A MAI+D ++
Sbjct: 75 LFQQRIIRCGGAVDDDMANLIVAQLLYLDAADPNRDIVMYVNSPGGSVTAGMAIFDTMRH 134
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GGTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 135 IRPDVSTVCVGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQTDIEIQANEI 194
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+ +E++ +D DRD +MS EA EYG+ID VI
Sbjct: 195 LHHKANLNGYLAYHTGQPYEKIVQDTDRDFFMSAKEAKEYGLIDAVI 241
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 133/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL LD++DP KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAQEYGLIDQVIDR 190
Query: 254 DSI 256
++
Sbjct: 191 HAV 193
>gi|378578414|ref|ZP_09827089.1| ATP-dependent Clp protease proteolytic subunit [Pantoea stewartii
subsp. stewartii DC283]
gi|378768262|ref|YP_005196733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea
ananatis LMG 5342]
gi|386080397|ref|YP_005993922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis PA13]
gi|354989578|gb|AER33702.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis PA13]
gi|365187746|emb|CCF10696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea
ananatis LMG 5342]
gi|377818694|gb|EHU01775.1| ATP-dependent Clp protease proteolytic subunit [Pantoea stewartii
subsp. stewartii DC283]
Length = 207
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S E++++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|350267685|ref|YP_004878992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349600572|gb|AEP88360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 198
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++ R
Sbjct: 133 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTR 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|284929120|ref|YP_003421642.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809579|gb|ADB95284.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 214
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG +DD +A++I++QLL LD++DP KDI+L++NSPGGS+ A +AIY
Sbjct: 42 DIYSRLLRERIIFLGTPVDDQMANSIVAQLLYLDSEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ +R D+ T+ G++AS + +L GGTKGKR A+P++R+MIHQP+GGA GQ +D+ I
Sbjct: 102 DTMKQIRPDIVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIAI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI++ K ++S TG+ F+ + D +RD +MS EAVEYG+ID VI
Sbjct: 162 QAQEILYIKKRLNNMLSEHTGKPFDTIAADTERDFFMSSKEAVEYGLIDKVI 213
>gi|399018228|ref|ZP_10720412.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. CF444]
gi|398101864|gb|EJL92064.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. CF444]
Length = 208
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKERI+FL ++D A+ +++QLL L++++P KDI
Sbjct: 15 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDATANLVVAQLLFLESENPDKDI 74
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q ++ DVST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 75 SLYINSPGGSVSAGMAIFDTMQFIKPDVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRI 134
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I++ TGR+ +Q+ KD DRD +MS A
Sbjct: 135 MIHQPLGGAQGQASDIEIQAREILYLRERLNVILAEKTGRTTDQIGKDTDRDNFMSATAA 194
Query: 242 VEYGIIDGVIDR 253
EYG+ID V+++
Sbjct: 195 AEYGLIDQVLEK 206
>gi|379699669|ref|YP_005241397.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323128768|gb|ADX16198.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
Length = 246
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 71 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 130
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 131 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 190
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 191 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 242
>gi|403745256|ref|ZP_10954194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121484|gb|EJY55777.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 128/169 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+++QLL L A DP KDI++++NSPGGS+SA +AIYD +Q
Sbjct: 17 LLKDRIIFLGTAIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGLAIYDTMQH 76
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS +++L G KGKRFA+PN+ VMIHQP+GGA GQ D+EI AR I
Sbjct: 77 IKPDVSTMCVGMAASMGAVLLTAGAKGKRFALPNSEVMIHQPLGGARGQASDIEIHARHI 136
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ +I++ +G+ E+V +D DRD +MS EA YG+ID VI R
Sbjct: 137 LKTRERLNKILAERSGQPLERVAQDTDRDNFMSAEEAKAYGLIDEVIYR 185
>gi|417324522|ref|ZP_12110764.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353578760|gb|EHC40499.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 216
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 41 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 100
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 101 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 160
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 161 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 212
>gi|375122544|ref|ZP_09767708.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|326626794|gb|EGE33137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
Length = 246
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 71 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 130
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 131 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 190
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 191 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 242
>gi|62126693|gb|AAX64396.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F215 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 246
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 71 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 130
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 131 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 190
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 191 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 242
>gi|418799553|ref|ZP_13355219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392763871|gb|EJA20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
Length = 243
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|16759428|ref|NP_455045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763829|ref|NP_459444.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29142800|ref|NP_806142.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|162139608|ref|YP_215477.2| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|168237562|ref|ZP_02662620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261116|ref|ZP_02683089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465541|ref|ZP_02699423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194443946|ref|YP_002039691.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451357|ref|YP_002044483.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194734455|ref|YP_002113479.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|204930575|ref|ZP_03221505.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207855928|ref|YP_002242579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213025962|ref|ZP_03340409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213419494|ref|ZP_03352560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213425858|ref|ZP_03358608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646005|ref|ZP_03376058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213853068|ref|ZP_03382600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238911421|ref|ZP_04655258.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|339998420|ref|YP_004729303.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|378443952|ref|YP_005231584.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378448785|ref|YP_005236144.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698411|ref|YP_005180368.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|378983053|ref|YP_005246208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378987850|ref|YP_005251014.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|409248894|ref|YP_006884732.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416424704|ref|ZP_11691885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416432829|ref|ZP_11696434.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416440099|ref|ZP_11700680.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416444542|ref|ZP_11703775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416453748|ref|ZP_11709822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458586|ref|ZP_11713105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416465622|ref|ZP_11716944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416473280|ref|ZP_11719747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416484368|ref|ZP_11724164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416501557|ref|ZP_11732147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416510475|ref|ZP_11737073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416520600|ref|ZP_11740312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416526651|ref|ZP_11742556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416536139|ref|ZP_11748206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542339|ref|ZP_11751509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552363|ref|ZP_11757079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416557282|ref|ZP_11759411.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416573530|ref|ZP_11767876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576687|ref|ZP_11769269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583721|ref|ZP_11773477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416595069|ref|ZP_11780883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416596606|ref|ZP_11781498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416605755|ref|ZP_11787187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416614720|ref|ZP_11792972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416623397|ref|ZP_11797372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416634045|ref|ZP_11802326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416639007|ref|ZP_11804306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648501|ref|ZP_11809146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416653401|ref|ZP_11811845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416670923|ref|ZP_11820412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416673586|ref|ZP_11820909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416691334|ref|ZP_11826156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416706818|ref|ZP_11832007.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416713232|ref|ZP_11836874.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416719437|ref|ZP_11841293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416723573|ref|ZP_11844239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734155|ref|ZP_11850810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416740075|ref|ZP_11854163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416745272|ref|ZP_11857204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416757171|ref|ZP_11863001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416764387|ref|ZP_11867991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416766796|ref|ZP_11869412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418485272|ref|ZP_13054256.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490798|ref|ZP_13057334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418493157|ref|ZP_13059625.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418498099|ref|ZP_13064514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418504393|ref|ZP_13070751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418507976|ref|ZP_13074284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418525614|ref|ZP_13091594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418763194|ref|ZP_13319318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766728|ref|ZP_13322800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418771899|ref|ZP_13327905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418774850|ref|ZP_13330811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418781197|ref|ZP_13337082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418784659|ref|ZP_13340496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418791369|ref|ZP_13347132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418793869|ref|ZP_13349595.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418804741|ref|ZP_13360345.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418807601|ref|ZP_13363159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812139|ref|ZP_13367663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418815498|ref|ZP_13370999.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418821321|ref|ZP_13376746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418825219|ref|ZP_13380527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418831776|ref|ZP_13386726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835778|ref|ZP_13390669.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418838762|ref|ZP_13393604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418844394|ref|ZP_13399186.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848964|ref|ZP_13403699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418853324|ref|ZP_13408017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860806|ref|ZP_13415381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418864289|ref|ZP_13418824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866312|ref|ZP_13420775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419727608|ref|ZP_14254576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733911|ref|ZP_14260806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419738879|ref|ZP_14265635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419743018|ref|ZP_14269686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749564|ref|ZP_14276043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|419788921|ref|ZP_14314604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419793963|ref|ZP_14319579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|421357762|ref|ZP_15808070.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421365243|ref|ZP_15815465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421368981|ref|ZP_15819165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421372429|ref|ZP_15822578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421376040|ref|ZP_15826149.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421380610|ref|ZP_15830672.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421383974|ref|ZP_15834003.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421392475|ref|ZP_15842432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421396008|ref|ZP_15845940.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421398667|ref|ZP_15848572.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421405151|ref|ZP_15854986.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421407751|ref|ZP_15857558.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421412093|ref|ZP_15861856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421419440|ref|ZP_15869132.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421423883|ref|ZP_15873534.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421425637|ref|ZP_15875272.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421429985|ref|ZP_15879579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421436812|ref|ZP_15886338.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421439185|ref|ZP_15888676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421445860|ref|ZP_15895281.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421451188|ref|ZP_15900554.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|421572546|ref|ZP_16018192.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421577455|ref|ZP_16023043.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421582044|ref|ZP_16027585.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421584557|ref|ZP_16030065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|421884328|ref|ZP_16315543.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422024583|ref|ZP_16371060.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422029606|ref|ZP_16375862.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427545785|ref|ZP_18926371.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427562133|ref|ZP_18931136.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427580636|ref|ZP_18935958.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427602844|ref|ZP_18940734.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427627512|ref|ZP_18945644.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427650793|ref|ZP_18950400.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427659813|ref|ZP_18955354.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427664926|ref|ZP_18960100.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427698521|ref|ZP_18965034.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|436615597|ref|ZP_20514266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436797184|ref|ZP_20523130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|436810601|ref|ZP_20529639.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436813651|ref|ZP_20531839.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831375|ref|ZP_20536043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436849785|ref|ZP_20540922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436856198|ref|ZP_20545303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436863183|ref|ZP_20549726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436871659|ref|ZP_20554833.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878810|ref|ZP_20559229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886925|ref|ZP_20563331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436894408|ref|ZP_20567886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436904534|ref|ZP_20574551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436909989|ref|ZP_20576574.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436918242|ref|ZP_20581413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436925537|ref|ZP_20585969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436934282|ref|ZP_20590286.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436941290|ref|ZP_20594850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949280|ref|ZP_20599294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436959668|ref|ZP_20603865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436975115|ref|ZP_20611391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436987194|ref|ZP_20615838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436999731|ref|ZP_20620304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437010049|ref|ZP_20624029.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437018154|ref|ZP_20626646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437035561|ref|ZP_20633487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437046589|ref|ZP_20638405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437049340|ref|ZP_20639960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437056846|ref|ZP_20644214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437065298|ref|ZP_20648983.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078922|ref|ZP_20656416.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437081946|ref|ZP_20658021.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437089970|ref|ZP_20662542.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437117164|ref|ZP_20669784.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122541|ref|ZP_20672383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437132642|ref|ZP_20678092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437137749|ref|ZP_20680544.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437149062|ref|ZP_20687935.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151979|ref|ZP_20689650.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437160927|ref|ZP_20695000.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437172784|ref|ZP_20701307.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437176839|ref|ZP_20703643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437188248|ref|ZP_20710252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437259709|ref|ZP_20717229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437272720|ref|ZP_20724470.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437274738|ref|ZP_20725430.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437288358|ref|ZP_20730692.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437307007|ref|ZP_20734649.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437323566|ref|ZP_20739300.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437338518|ref|ZP_20743723.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437353359|ref|ZP_20747850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437456275|ref|ZP_20760394.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437470002|ref|ZP_20765017.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437485279|ref|ZP_20769391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437499044|ref|ZP_20773853.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437513523|ref|ZP_20777501.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437531377|ref|ZP_20780747.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437554751|ref|ZP_20784523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437571697|ref|ZP_20788806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437602362|ref|ZP_20798369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437625360|ref|ZP_20805445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437632904|ref|ZP_20806597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437658474|ref|ZP_20811681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437672066|ref|ZP_20816065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437694788|ref|ZP_20821863.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437710351|ref|ZP_20826456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437726124|ref|ZP_20829929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437763921|ref|ZP_20834985.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437811612|ref|ZP_20841204.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437833273|ref|ZP_20844621.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|438047872|ref|ZP_20856088.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438091449|ref|ZP_20860960.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438105780|ref|ZP_20866398.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438114455|ref|ZP_20870071.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438147683|ref|ZP_20876176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|440761974|ref|ZP_20941040.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440768721|ref|ZP_20947686.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440772487|ref|ZP_20951391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445144197|ref|ZP_21386946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445150702|ref|ZP_21389848.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445172332|ref|ZP_21396423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445214950|ref|ZP_21401734.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445232595|ref|ZP_21406108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445246809|ref|ZP_21408349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445337409|ref|ZP_21415966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445343522|ref|ZP_21416991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445354600|ref|ZP_21421499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|449785023|ref|YP_002145429.2| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|452121291|ref|YP_007471539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|60391923|sp|P0A1D7.1|CLPP_SALTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|60391924|sp|P0A1D8.1|CLPP_SALTI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|67460140|sp|Q57SB5.2|CLPP_SALCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706468|sp|B5QTJ6.1|CLPP_SALEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706469|sp|B4T9E3.1|CLPP_SALHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706470|sp|B4SWU1.1|CLPP_SALNS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706472|sp|B4TMC6.1|CLPP_SALSV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25289858|pir||AC0558 ATP-dependent clp protease proteolytic chain [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|7594816|dbj|BAA94668.1| serine protease subunit [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16418955|gb|AAL19403.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16501719|emb|CAD08907.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138432|gb|AAO70002.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|194402609|gb|ACF62831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409661|gb|ACF69880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194709957|gb|ACF89178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631923|gb|EDX50443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197289522|gb|EDY28885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204320509|gb|EDZ05712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205350070|gb|EDZ36701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206707731|emb|CAR32016.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261245731|emb|CBG23528.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992163|gb|ACY87048.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157059|emb|CBW16543.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911481|dbj|BAJ35455.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320084722|emb|CBY94513.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322614726|gb|EFY11655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618832|gb|EFY15720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623539|gb|EFY20378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629162|gb|EFY25941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631883|gb|EFY28637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637380|gb|EFY34082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642065|gb|EFY38675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647884|gb|EFY44359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652562|gb|EFY48916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653276|gb|EFY49609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660575|gb|EFY56811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664727|gb|EFY60920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669220|gb|EFY65370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670765|gb|EFY66898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678996|gb|EFY75051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682025|gb|EFY78050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685146|gb|EFY81143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192960|gb|EFZ78183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196958|gb|EFZ82100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203943|gb|EFZ88960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323214175|gb|EFZ98933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214501|gb|EFZ99252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223058|gb|EGA07401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227007|gb|EGA11188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230175|gb|EGA14295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233913|gb|EGA18002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238393|gb|EGA22451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244080|gb|EGA28089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246241|gb|EGA30224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251867|gb|EGA35730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257864|gb|EGA41543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261123|gb|EGA44715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264947|gb|EGA48446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272510|gb|EGA55917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332987397|gb|AEF06380.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|339511781|emb|CCC29490.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|363549144|gb|EHL33501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363554589|gb|EHL38824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363557703|gb|EHL41908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363564589|gb|EHL48636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565245|gb|EHL49281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363571797|gb|EHL55701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363578796|gb|EHL62598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366056250|gb|EHN20576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366065085|gb|EHN29280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366065332|gb|EHN29522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366071235|gb|EHN35335.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366073876|gb|EHN37940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366080282|gb|EHN44254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366829495|gb|EHN56371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372206383|gb|EHP19887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379986042|emb|CCF87816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|381299098|gb|EIC40172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381300719|gb|EIC41777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381301190|gb|EIC42246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381310720|gb|EIC51546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|381312570|gb|EIC53367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|392616053|gb|EIW98488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392616387|gb|EIW98820.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392733474|gb|EIZ90676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392734438|gb|EIZ91620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392736739|gb|EIZ93901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392747924|gb|EJA04915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392750050|gb|EJA07026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392754190|gb|EJA11109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392755458|gb|EJA12368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392763549|gb|EJA20356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392769770|gb|EJA26499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392776879|gb|EJA33565.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392778864|gb|EJA35535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392790916|gb|EJA47409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392791950|gb|EJA48418.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392798673|gb|EJA54944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803053|gb|EJA59254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392814588|gb|EJA70539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392815214|gb|EJA71158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392816913|gb|EJA72832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392822311|gb|EJA78123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392826190|gb|EJA81923.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392827372|gb|EJA83081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831550|gb|EJA87183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840222|gb|EJA95758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395980754|gb|EJH89977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395983276|gb|EJH92469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395989999|gb|EJH99131.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|396000079|gb|EJI09094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396003267|gb|EJI12255.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396003659|gb|EJI12646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396008036|gb|EJI16971.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396011052|gb|EJI19963.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396020536|gb|EJI29377.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396024462|gb|EJI33248.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396029683|gb|EJI38419.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396030457|gb|EJI39191.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396035580|gb|EJI44252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396035931|gb|EJI44602.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396044341|gb|EJI52938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396052132|gb|EJI60640.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396056908|gb|EJI65381.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396057302|gb|EJI65774.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396063943|gb|EJI72331.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396064295|gb|EJI72682.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396071391|gb|EJI79716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402515481|gb|EJW22895.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402516043|gb|EJW23456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402516372|gb|EJW23783.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402531075|gb|EJW38288.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|414023307|gb|EKT06741.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414023848|gb|EKT07262.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414025324|gb|EKT08654.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414037188|gb|EKT19972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414038658|gb|EKT21365.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414042387|gb|EKT24925.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414051734|gb|EKT33818.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414053183|gb|EKT35195.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414057649|gb|EKT39402.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414061847|gb|EKT43224.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414067321|gb|EKT47699.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|434938414|gb|ELL45392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|434961256|gb|ELL54574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|434965093|gb|ELL58056.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434967686|gb|ELL60487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434975159|gb|ELL67469.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982332|gb|ELL74155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434988362|gb|ELL79961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434991631|gb|ELL83119.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434997710|gb|ELL88949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435000874|gb|ELL91996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435007486|gb|ELL98339.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011457|gb|ELM02177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435017056|gb|ELM07564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435018222|gb|ELM08697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435028362|gb|ELM18441.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030974|gb|ELM20963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435039930|gb|ELM29699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435041422|gb|ELM31164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435045121|gb|ELM34766.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050066|gb|ELM39571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435053978|gb|ELM43414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435054333|gb|ELM43768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435059775|gb|ELM49050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435060272|gb|ELM49542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435066949|gb|ELM56020.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435074928|gb|ELM63751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435078059|gb|ELM66803.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435081746|gb|ELM70387.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435096364|gb|ELM84636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096878|gb|ELM85140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435099946|gb|ELM88137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101278|gb|ELM89432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111114|gb|ELM99019.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113536|gb|ELN01382.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435114988|gb|ELN02778.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435122189|gb|ELN09711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435123367|gb|ELN10860.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435130871|gb|ELN18099.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435134383|gb|ELN21511.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435143452|gb|ELN30318.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435143861|gb|ELN30715.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435146440|gb|ELN33233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435155564|gb|ELN42108.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435156168|gb|ELN42670.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435165097|gb|ELN51157.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435168052|gb|ELN53905.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435175816|gb|ELN61219.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435183758|gb|ELN68719.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435186995|gb|ELN71808.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435194617|gb|ELN79045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435195909|gb|ELN80265.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435206982|gb|ELN90474.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435212164|gb|ELN95189.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435214887|gb|ELN97635.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435216454|gb|ELN98929.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435223967|gb|ELO05951.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435230160|gb|ELO11494.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435243443|gb|ELO23701.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435243627|gb|ELO23884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435248150|gb|ELO28071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435253179|gb|ELO32667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435260050|gb|ELO39263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435270473|gb|ELO48969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435278368|gb|ELO56239.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435279708|gb|ELO57452.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435282538|gb|ELO60153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289124|gb|ELO66114.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435292074|gb|ELO68863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435297966|gb|ELO74223.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435302259|gb|ELO78234.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435308367|gb|ELO83330.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435315858|gb|ELO89078.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435319476|gb|ELO92303.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435321469|gb|ELO93884.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435328854|gb|ELP00312.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|436416440|gb|ELP14346.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436418436|gb|ELP16320.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436424266|gb|ELP22049.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|444847337|gb|ELX72487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444856539|gb|ELX81566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444859546|gb|ELX84490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444860439|gb|ELX85354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444862183|gb|ELX87043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444873409|gb|ELX97706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444881326|gb|ELY05370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444887690|gb|ELY11383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|444890253|gb|ELY13606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|451910295|gb|AGF82101.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 207
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|373496129|ref|ZP_09586677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
gi|404368998|ref|ZP_10974344.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|313688290|gb|EFS25125.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|371966040|gb|EHO83532.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
Length = 191
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 127/169 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+AI++QLL L+A+DP KDI +++NSPGG ++A MAIYD +
Sbjct: 23 LLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPGGVVTAGMAIYDTMNY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV TV +G +AS +L+LG G KGKR+A+ ++R+MIHQP+GGA GQ D+EIQA+EI
Sbjct: 83 IKPDVQTVCIGQAASMGALLLGAGAKGKRYALEHSRIMIHQPLGGARGQATDIEIQAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K+ ++I++ TG+S ++ D +RD YMS EA YG+ID V +
Sbjct: 143 LRMKEMLSQIMADCTGKSLSEILNDTERDNYMSAEEAKNYGLIDQVFKK 191
>gi|161615359|ref|YP_001589324.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197263975|ref|ZP_03164049.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242637|ref|YP_002214402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390046|ref|ZP_03216657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205357179|ref|ZP_02345490.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205359635|ref|ZP_02830941.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224582286|ref|YP_002636084.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|375000176|ref|ZP_09724516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113375|ref|ZP_09758545.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375117884|ref|ZP_09763051.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|378956164|ref|YP_005213651.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|417339754|ref|ZP_12121240.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|417346821|ref|ZP_12126518.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417356090|ref|ZP_12131735.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417363848|ref|ZP_12136955.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|417371361|ref|ZP_12141962.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|417379165|ref|ZP_12147614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417388734|ref|ZP_12152775.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|417451305|ref|ZP_12163046.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417504469|ref|ZP_12174140.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|417525809|ref|ZP_12184553.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|417537133|ref|ZP_12190097.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|161364723|gb|ABX68491.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197242230|gb|EDY24850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197937153|gb|ACH74486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602491|gb|EDZ01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205323485|gb|EDZ11324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205344194|gb|EDZ30958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224466813|gb|ACN44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|322713521|gb|EFZ05092.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|326622151|gb|EGE28496.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|353074864|gb|EHB40624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353578891|gb|EHC40596.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353597181|gb|EHC53972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353599186|gb|EHC55426.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353608251|gb|EHC61882.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353618300|gb|EHC69016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353624600|gb|EHC73595.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353636599|gb|EHC82614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353651589|gb|EHC93636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353668979|gb|EHD06016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353669715|gb|EHD06539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|357206775|gb|AET54821.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|357959981|gb|EHJ83999.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 243
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 135/183 (73%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG ID +A+ I++QLL LDA+D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++PN+R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ E++++D +RD +MSP EA++YG+ID VID+
Sbjct: 131 ATDIEIQAKEILYHKRKLNEHLAEHTGQPLERIEQDTERDFFMSPQEAMDYGLIDQVIDK 190
Query: 254 DSI 256
++
Sbjct: 191 KAV 193
>gi|398815689|ref|ZP_10574354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398034174|gb|EJL27450.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 193
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 122/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+ LG IDD +A+ +++QLL L A+DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 23 LLKDRIILLGTEIDDEIANLVVAQLLFLQAEDPDKDISLYINSPGGSVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L G KGKRFA+PN VMIHQP+GG GQ D+ I A I
Sbjct: 83 IKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGVRGQAEDIRIHAEWI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
M K I+S TG+ +E+V++D DRD +MS EA YG+ID +I+R
Sbjct: 143 MKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAKAYGLIDSIIER 191
>gi|417331694|ref|ZP_12115851.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353584568|gb|EHC44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
Length = 194
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 79 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 139 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 190
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+ +++QLL L+A++P KDI+L++NSPGG ++A +AIYD +Q
Sbjct: 35 LLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPGGLVTAGLAIYDTMQY 94
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ DV+T+ +G +AS +++L G KGKRFA+PN+R+MIHQP+GGA G DVEI +E+
Sbjct: 95 VKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIHQPLGGAEGSAKDVEILTKEL 154
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I+S TG+ E+++KD DRD +MS EA+EYGIID VI
Sbjct: 155 LRIKRIINEILSKHTGQDIERIEKDTDRDFFMSAQEAMEYGIIDKVI 201
>gi|283784263|ref|YP_003364128.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
gi|448236261|ref|YP_001571487.2| ClpP-like protease [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|282947717|emb|CBG87272.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
Length = 207
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|157369338|ref|YP_001477327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
gi|157321102|gb|ABV40199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
Length = 207
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S S +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG++ EQ+++D +RDR+M+ EAVEYG++DG++
Sbjct: 152 HAREILKVKARMNELMAEHTGQTLEQIERDTERDRFMTAEEAVEYGLVDGIL 203
>gi|434402424|ref|YP_007145309.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428256679|gb|AFZ22629.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 232
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LDA+D KDI+L++NSPGGS+ A MAIYD +Q
Sbjct: 50 LLRERIIFLGTPIDDAVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTMQQ 109
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R +V T+ G++AS + +L G GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 110 IRPNVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 169
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K ++++ TG++ E+++ D +RD +MS EA YG+ID VI R +I
Sbjct: 170 LYIKAKLNQLLAQHTGQALEKIEADTERDFFMSAEEAKNYGLIDQVISRQNI 221
>gi|409406436|ref|ZP_11254898.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum sp.
GW103]
gi|386434985|gb|EIJ47810.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum sp.
GW103]
Length = 208
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKERI+FL ++D +A+ I++QLL L++++P KDI
Sbjct: 15 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDI 74
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q ++ VST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 75 SLYINSPGGSVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRI 134
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I++ TGR+ EQ+ KD DRD +MS A
Sbjct: 135 MIHQPLGGAQGQASDIEIQAREILYLRERLNTILAEKTGRTVEQISKDTDRDNFMSAEAA 194
Query: 242 VEYGIIDGVI 251
EYG+ID V+
Sbjct: 195 AEYGLIDQVL 204
>gi|453062436|gb|EMF03427.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
VGH107]
Length = 207
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 126/176 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S S +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG+ EQ+++D +RDR+M+ EAVEYG++DG++ S
Sbjct: 152 HAREILKVKARMNELMAEHTGQPLEQIERDTERDRFMTAEEAVEYGLVDGILTHRS 207
>gi|428300044|ref|YP_007138350.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236588|gb|AFZ02378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 231
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 130/177 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG IDD VA++I++QLL LDA+D KDI+L++NSPGGS+ A MAIY
Sbjct: 44 DIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIY 103
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 104 DTIQQIRPDVVTICFGLAASMGAFLLTSGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEI 163
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
QAREI++ K ++++ TG+ E++ D +RD +MS EA YG+ID VI R ++
Sbjct: 164 QAREILYVKAELNKMMAHHTGQPLERITADTERDFFMSAEEAKNYGLIDQVITRQNL 220
>gi|423138926|ref|ZP_17126564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|160865722|gb|ABX22345.1| hypothetical protein SARI_02486 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|379051480|gb|EHY69371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 243
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 141/201 (70%), Gaps = 2/201 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+FLG+ +DD VA+ I++QLL L+++DP KDI ++
Sbjct: 5 PMVVEQSNRGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG ++A MA+YD +Q ++ DV+TV +G +AS +L+L G KGKRF++PN+R+MIHQ
Sbjct: 65 NSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++IQA EI+ K+ + I+S TG++F+++ +D DRD +MS +A EYG
Sbjct: 125 PLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYG 184
Query: 246 IIDGVI-DRDSIIPLVPVPEK 265
++D V+ RD + EK
Sbjct: 185 LVDHVVASRDELEKAEAAKEK 205
>gi|194471774|ref|ZP_03077758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205357584|ref|ZP_02571531.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205358475|ref|ZP_02656494.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205358901|ref|ZP_02665206.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|289827300|ref|ZP_06545983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374978474|ref|ZP_09719816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378960582|ref|YP_005218068.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|383495256|ref|YP_005395945.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|386590381|ref|YP_006086781.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417406175|ref|ZP_12157835.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417472928|ref|ZP_12168488.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417516426|ref|ZP_12179332.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|194458138|gb|EDX46977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197213461|gb|ACH50858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205331008|gb|EDZ17772.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205334088|gb|EDZ20852.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340153|gb|EDZ26917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|321226026|gb|EFX51077.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|353628150|gb|EHC76286.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353652681|gb|EHC94446.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353654323|gb|EHC95627.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|374354454|gb|AEZ46215.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|380462077|gb|AFD57480.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|383797425|gb|AFH44507.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
Length = 243
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|94310823|ref|YP_584033.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
metallidurans CH34]
gi|430810194|ref|ZP_19437309.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
gi|116243154|sp|Q1LM62.1|CLPP_RALME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|93354675|gb|ABF08764.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Cupriavidus metallidurans CH34]
gi|429497428|gb|EKZ95961.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
Length = 216
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 144/214 (67%), Gaps = 7/214 (3%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFV 101
R +T+ AL+ Q L P + RG A D LLKER+VF+ ++D
Sbjct: 9 RLATTQASALETQ------GLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQT 62
Query: 102 ADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTA 161
A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DV T+ +GM+AS
Sbjct: 63 ANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMG 122
Query: 162 SLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGR 221
+ +L G KGKR A+PN+R+MIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+
Sbjct: 123 AFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQ 182
Query: 222 SFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
E++ +D DRD +MS +AV+YG+ID VI R S
Sbjct: 183 PVEKIARDTDRDNFMSGDQAVDYGLIDKVITRRS 216
>gi|294501768|ref|YP_003565468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|295707118|ref|YP_003600193.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
gi|384044395|ref|YP_005492412.1| ATP-dependent Clp protease proteolytic subunit [Bacillus megaterium
WSH-002]
gi|294351705|gb|ADE72034.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|294804777|gb|ADF41843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
gi|345442086|gb|AEN87103.1| ATP-dependent Clp protease proteolytic subunit [Bacillus megaterium
WSH-002]
Length = 195
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIILGSAIDDNVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ ++ I++ TG+ E +Q+D DRD +M+ A+EYG+ID V++
Sbjct: 133 ATEIEIAAKRILFLREKLNSILAERTGQPLEVLQRDTDRDNFMTAERALEYGLIDKVLEN 192
Query: 254 D 254
D
Sbjct: 193 D 193
>gi|338729930|ref|YP_004659322.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
gi|335364281|gb|AEH50226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
Length = 202
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG IDD A+ +++QLL L+A+DP KDI L++NSPGGS++A +AIY
Sbjct: 25 DIYSRLLKDRIVFLGYPIDDHTANLVVAQLLFLEAEDPDKDIHLYINSPGGSVTAGLAIY 84
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ DV T+ +G +AS A+++L GTKGKR+A+PN R+M+HQP+GGA G V DVEI
Sbjct: 85 DTMQYVKCDVVTICIGQAASMAAVLLASGTKGKRYALPNARIMLHQPLGGAEGPVKDVEI 144
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
+E++ K+ +I+S TG+ E+++KD DRD +M EA+ YG+ID VI+ +I
Sbjct: 145 ITKELLRIKNLINKILSEKTGQPIERIEKDTDRDFFMDAYEALNYGLIDKVIEPKKVI 202
>gi|304395499|ref|ZP_07377382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|440758262|ref|ZP_20937433.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
299R]
gi|304356793|gb|EFM21157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|436428046|gb|ELP25712.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
299R]
Length = 207
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVPLSS-APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R++ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REYTAPHNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG++ E++++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKTLEEIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSASEAVEYGLVDSIL 203
>gi|160947717|ref|ZP_02094884.1| hypothetical protein PEPMIC_01652 [Parvimonas micra ATCC 33270]
gi|158446851|gb|EDP23846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas micra ATCC 33270]
Length = 192
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 129/173 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +AD I++QLL L+++DP KDI++++NSPGGS+SA +AIY
Sbjct: 19 DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPGGSVSAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRFA+PN +MIHQP+GGA GQ D++I
Sbjct: 79 DTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGAQGQAEDIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
QA++I+ + I++ TG+S ++++KD DRD YMS EA EYGIID VI+
Sbjct: 139 QAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMSAYEAKEYGIIDEVIE 191
>gi|443312110|ref|ZP_21041730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442777788|gb|ELR88061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 202
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +D +A+ I++QLL LDA+D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIVFLGQKVDSNLANLIVAQLLFLDAEDAEKDIFLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++PN+R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTIKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ E++ +D +RD +MSP EA +YG+ID VI+R
Sbjct: 131 ATDIEIQAKEILYHKRKLNEHLAEHTGQPLEKIAEDTERDFFMSPTEAKDYGLIDQVINR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|160893842|ref|ZP_02074625.1| hypothetical protein CLOL250_01396 [Clostridium sp. L2-50]
gi|156864494|gb|EDO57925.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. L2-50]
Length = 193
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 122/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ++D A +I+QLL L+++DP+KDI L++NSPGGS++A + IYD +Q
Sbjct: 24 LLKDRIIFLGEEVNDTSASIVIAQLLFLESEDPSKDISLYINSPGGSVTAGLGIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ GM+AS + +L GG KGKRFA+PN +MIHQP GG+ GQ ++EI A+ I
Sbjct: 84 IKCDVSTICCGMAASMGAFLLAGGAKGKRFALPNAEIMIHQPSGGSQGQATEIEIAAKHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K+ R++S TG+ +E + D +RD +MS EA YG+ID VI +
Sbjct: 144 LKTKEKLNRMLSENTGKPYETIAADTERDNWMSAEEACAYGLIDSVIAK 192
>gi|400406574|ref|YP_006589322.1| ATP-dependent Clp protease, proteolytic subunit ClpP [secondary
endosymbiont of Heteropsylla cubana]
gi|400364827|gb|AFP85894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [secondary
endosymbiont of Heteropsylla cubana]
Length = 207
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 137/201 (68%), Gaps = 2/201 (0%)
Query: 55 QQRQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
+ + H +P ++ P G + D LLKERI+F+ +I+D +A I++Q++ L
Sbjct: 5 KTKHHFIPHMTLVPMVVEKTTHGERSFDIFSRLLKERIIFINGHIEDHMASLIVAQMMFL 64
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
+A++P K+I L++NSPGG ++A M IYD +Q ++ D+ST +G +AS + +L GTKGK
Sbjct: 65 EAENPEKNISLYINSPGGVITAGMCIYDTMQFIKPDISTFCMGQAASMGAFLLSSGTKGK 124
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
RF++PNTR+MIHQP+GG GQ D+EI REI++ KD ++++ TG+ + +++D +R
Sbjct: 125 RFSLPNTRIMIHQPLGGFQGQATDIEIHTREILYIKDRMNKLMAKHTGKPLKMIEQDTER 184
Query: 233 DRYMSPIEAVEYGIIDGVIDR 253
DR++S EAVEYG+ID V+
Sbjct: 185 DRFLSADEAVEYGLIDSVLSH 205
>gi|398833401|ref|ZP_10591533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. YR522]
gi|398221568|gb|EJN07975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. YR522]
Length = 208
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKERI+FL ++D +A+ I++QLL L++++P KDI
Sbjct: 15 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDGMANLIVAQLLFLESENPDKDI 74
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q ++ VST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 75 SLYINSPGGSVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRI 134
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I++ TGRS EQ+ KD DRD +MS A
Sbjct: 135 MIHQPLGGAQGQASDIEIQAREILYLRERLNAILAEKTGRSVEQIAKDTDRDNFMSADAA 194
Query: 242 VEYGIIDGVI 251
EYG+ID V+
Sbjct: 195 AEYGLIDKVL 204
>gi|219115403|ref|XP_002178497.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410232|gb|EEC50162.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 260
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 75 RGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
+ + D + LLK+RI+ LG +++D VA+ +++QLL L +DP KDI L++NSPGGS+SA
Sbjct: 67 KSGQLDVVSRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPNKDITLYINSPGGSVSA 126
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
+AIYD ++ + DV TV GM+AS + +LG GT GKR ++PN R+MIHQP+GGA GQ
Sbjct: 127 GLAIYDTMKFIPCDVQTVCFGMAASMGAFLLGAGTPGKRKSLPNARIMIHQPLGGAQGQA 186
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID-R 253
D+EIQA+EI++ K + I+ +T + E++ D DRD +M+P EA++YGIID VI +
Sbjct: 187 QDIEIQAKEILYTKALLNKFIADYTDQPEEKIAADCDRDFFMTPYEALDYGIIDEVIKTK 246
Query: 254 DSIIPLVPVP 263
S IP+ +P
Sbjct: 247 TSHIPMPAMP 256
>gi|257138854|ref|ZP_05587116.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|424903788|ref|ZP_18327301.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|390931661|gb|EIP89062.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
Length = 217
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TLA Q + L P T+ RG + D LLKERIVF+ ++D A+ +++
Sbjct: 10 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG+ID V
Sbjct: 190 RDTDRDNFMSSEDAKAYGLIDHV 212
>gi|432532626|ref|ZP_19769626.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
gi|431063818|gb|ELD73032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
Length = 207
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 128/172 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K + +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGHMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|425445342|ref|ZP_18825374.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425453823|ref|ZP_18833576.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389734665|emb|CCI01691.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389800128|emb|CCI20438.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
Length = 233
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS+ A +AIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R V+T+ G++AS + +L GG GKR ++P++R+MIHQP+GGA GQ D+ I
Sbjct: 107 DTMQQIRPHVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII-P 258
QA+EI++ K +++ TG+ ++++ D +RD +MS +EA EYG+ID VI R + P
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPELPDP 226
Query: 259 LVPV 262
VPV
Sbjct: 227 TVPV 230
>gi|421745790|ref|ZP_16183628.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
gi|409775704|gb|EKN57162.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
Length = 216
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 142/213 (66%), Gaps = 1/213 (0%)
Query: 42 TRRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDF 100
TR LA Q + L P + RG A D LLKER+VF+ ++D
Sbjct: 2 TRNDLLDRLATTQASALETMGLGLVPMVVEQSGRGERAYDIYSRLLKERLVFMVGEVNDQ 61
Query: 101 VADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAST 160
A+ +I+QLL L++++P KD+ L++NSPGGS+SA +A+YD +Q ++ DVST+ +GM+AS
Sbjct: 62 TANLVIAQLLFLESENPDKDVFLYINSPGGSVSAGLAVYDTMQFIKPDVSTLCMGMAASM 121
Query: 161 ASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTG 220
+ +L G KGKR A+PN+R+MIHQP+GGA GQ D+EIQAREI++ ++ I++ TG
Sbjct: 122 GAFLLAAGAKGKRLALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILAEVTG 181
Query: 221 RSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ E++ +D DRD +MS +AV+YG+ID VI R
Sbjct: 182 QPVEKIARDTDRDNFMSGDQAVDYGLIDKVIAR 214
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++QLL L+A+DP KDI L++NSPGG ++A +AIY
Sbjct: 19 DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++I
Sbjct: 79 DTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI+ K+ TR ++ +G+SFE+V D +RD +MS EA+EYG+ID V+
Sbjct: 139 QAQEILKLKEMLTRKMAEHSGQSFEKVAADTERDNFMSAQEAMEYGLIDKVL 190
>gi|308185908|ref|YP_003930039.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
gi|372276432|ref|ZP_09512468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
SL1_M5]
gi|390435716|ref|ZP_10224254.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
IG1]
gi|308056418|gb|ADO08590.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
Length = 207
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVPLSS-APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R++ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REYTAPHNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG++ E++++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKTLEEIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSANEAVEYGLVDSIL 203
>gi|219129357|ref|XP_002184857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403642|gb|EEC43593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 188
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D + LLK+RI+ LG +DD VA+ +++QLL L +DP KDI L++NSPGGS+SA MAIY
Sbjct: 2 DVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAIY 61
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V DVSTV GM+AS + +LG G KGKR A+PN+R+MIHQP+GGA GQ D+EI
Sbjct: 62 DTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEI 121
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI+ ++ I+ + + ++++ D DRD +M+P EAVEYGIID V+
Sbjct: 122 QAKEILFIREVLNTYIAEYCDQPKDKIEADCDRDFFMTPEEAVEYGIIDEVV 173
>gi|88860444|ref|ZP_01135082.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
gi|88817642|gb|EAR27459.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
Length = 205
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++QLL L++++P KDI +++NSPGGS++A MAIY
Sbjct: 28 DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIFIYINSPGGSVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ +VSTV +G +AS + +L GGTKGKRF +PN+RVMIHQP+GG GQ D EI
Sbjct: 88 DTMNFIKPNVSTVCMGQAASMGAFLLSGGTKGKRFCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ KD R+++ TG+ E + +D DRD +MS +AVEYGI+D V+
Sbjct: 148 HAREILSIKDKLNRLLAEHTGQPIEVISRDTDRDNFMSGAQAVEYGIVDAVL 199
>gi|291085757|ref|ZP_06571180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
gi|291069764|gb|EFE07873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
Length = 243
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++F+ ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 68 DIYSRLLKERVIFMTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|383816700|ref|ZP_09972092.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
gi|383294412|gb|EIC82754.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
Length = 209
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 138/198 (69%), Gaps = 2/198 (1%)
Query: 56 QRQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+R+ P ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+
Sbjct: 6 EREQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S S +L G KGKR
Sbjct: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAGAKGKR 125
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
+A+PN+RVMIHQP+GG GQ D++I AREI+ K+ +++ TG+S E++++D +RD
Sbjct: 126 YALPNSRVMIHQPLGGFQGQATDIDIHAREILKVKNRMNTLMAQHTGKSLEEIERDTERD 185
Query: 234 RYMSPIEAVEYGIIDGVI 251
R++S EAVEYG++D V+
Sbjct: 186 RFLSASEAVEYGLVDKVM 203
>gi|406906710|gb|EKD47785.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 206
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query: 55 QQRQHDVPLSSAPQTPATAMRGAEA----DAMGLLLKERIVFLGNNIDDFVADAIISQLL 110
+ +Q P+ S+ P + A+ D LLK+RI+FLG ID VA+ II+QLL
Sbjct: 3 KTKQAYAPIQSSILVPTVLEKTAQGERSYDIYSRLLKDRIIFLGTTIDGNVANLIIAQLL 62
Query: 111 LLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTK 170
LD ++P KDI +++NSPGG ++A +AIYD +Q ++ DVSTV +GM+AS +++L GG K
Sbjct: 63 FLDNENPKKDITMYINSPGGHVTAGLAIYDTMQHLKCDVSTVCVGMAASMGAVLLCGGAK 122
Query: 171 GKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDI 230
GKRF++PN VMIHQP+GG GQ ++EI A+ I+ K +I+ TG+ +V+KD
Sbjct: 123 GKRFSLPNAEVMIHQPLGGVEGQATEIEIHAKHILKTKTRLNELIAKHTGKKVSEVEKDT 182
Query: 231 DRDRYMSPIEAVEYGIIDGVIDR 253
DRD +MS +A++YG+ID ++ +
Sbjct: 183 DRDNFMSAEDALKYGLIDKIVRK 205
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+I+Q+L L+A+DP KDI L++NSPGG ++A MAIYD +Q
Sbjct: 23 LLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +++L GTKGKR+A+P+ RVMIHQP+GG GQ ++EI AREI
Sbjct: 83 IKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARVMIHQPLGGVQGQASEIEIHAREI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ ++ I++ +G+ E V +D DRD +MS +AVEYG+ID V+ R+ +
Sbjct: 143 LRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVLTREPV 194
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 127/172 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +I+QLL L+A+DP KDI L++NSPGG ++A MAIYD ++
Sbjct: 23 LLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++A VST+ +G +AS + +L GG KGKRF++ N+R+MIHQP+GG GQ D+ I A+EI
Sbjct: 83 IKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIMIHQPLGGFQGQATDIHIHAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ KD +++ TG+SFE+V D +RD +MS EA YGIID ++ R+ +
Sbjct: 143 LRMKDQLNELLAEHTGQSFEKVAADTERDYFMSGEEAKSYGIIDAIVTRNVV 194
>gi|300311895|ref|YP_003775987.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum
seropedicae SmR1]
gi|124483356|emb|CAM32551.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae]
gi|300074680|gb|ADJ64079.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 208
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKERI+FL ++D +A+ I++QLL L++++P KDI
Sbjct: 15 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDI 74
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q ++ VST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 75 SLYINSPGGSVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRI 134
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I++ TGR+ EQ+ KD DRD +MS A
Sbjct: 135 MIHQPLGGAQGQASDIEIQAREILYLRERLNTILAEKTGRTVEQISKDTDRDNFMSADAA 194
Query: 242 VEYGIIDGVI 251
EYG+ID V+
Sbjct: 195 AEYGLIDKVL 204
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
Length = 222
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
++H++ P RG D LL+ERIVFLG IDD +A II+QLL L+A+
Sbjct: 13 KKHEIFNQLVPYVIEQTGRGERGMDIFSRLLRERIVFLGTAIDDHIASLIIAQLLFLEAE 72
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
DP KDI L++NSPGGS+SA +AIYD ++ +R+ VST+ +G++AS +++L GG GKR A
Sbjct: 73 DPDKDIYLYINSPGGSVSAGLAIYDTMKYIRSKVSTICVGLAASMGAVLLAGGEAGKRSA 132
Query: 176 MPNTRVMIHQP-MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+P++++MIHQP +GG GQ D+EI A+E++ +D +I++ TG+S+EQ+ KD DRD
Sbjct: 133 LPHSKIMIHQPWVGGLQGQTTDIEIHAKEMIKTRDTIYKILAEHTGKSYEQIAKDCDRDY 192
Query: 235 YMSPIEAVEYGIIDGVI 251
+M+ EA EY +ID ++
Sbjct: 193 FMTAEEAKEYNLIDNIL 209
>gi|403235930|ref|ZP_10914516.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
10403023]
Length = 197
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ +VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A+ I+ ++ +I+S TG+ E +Q+D DRD +M+ A+EYG+ID V+
Sbjct: 133 ATEIEIAAKRILFLREKLNQILSERTGQPLEVLQRDTDRDNFMTAERAMEYGLIDKVM 190
>gi|398798176|ref|ZP_10557477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
GM01]
gi|398100893|gb|EJL91121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
GM01]
Length = 207
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 136/197 (69%), Gaps = 2/197 (1%)
Query: 57 RQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
R+ P ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A
Sbjct: 7 REFTAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD ++ ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI AREI+ K +++ TG+S E++++D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDR 186
Query: 235 YMSPIEAVEYGIIDGVI 251
++S EAVEYG++D ++
Sbjct: 187 FLSAGEAVEYGLVDSIL 203
>gi|271499597|ref|YP_003332622.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
gi|270343152|gb|ACZ75917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
Length = 207
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 128/172 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D++A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K +++ TG+S + +++D +RDR++S EAVEYG++D V+
Sbjct: 152 HAKEILKVKARMNELMAKHTGQSLDVIERDTERDRFLSAAEAVEYGLVDSVL 203
>gi|427714618|ref|YP_007063242.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. PCC 6312]
gi|427378747|gb|AFY62699.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. PCC 6312]
Length = 241
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 136/189 (71%), Gaps = 7/189 (3%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNN------IDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
RG A D LL+ERI+FLG + IDD VAD+I++QLL LDA+DP +DI L++NS
Sbjct: 44 RGERAFDIYSRLLRERIIFLGGSGGQGRGIDDTVADSIVAQLLFLDAEDPERDIYLYINS 103
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGGS++A MAIYD ++ VR DV T+ G++AS + +L GGT GKR A+P++R+MIHQP+
Sbjct: 104 PGGSVTAGMAIYDTMKHVRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPHSRIMIHQPL 163
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGA GQ +D+EIQAREI+++K +++ T + E+++ D +RD +MS EA YG+I
Sbjct: 164 GGAQGQAVDIEIQAREILYHKKKLNELLASHTSQPIERIEADTERDFFMSAEEAQAYGLI 223
Query: 248 DGVIDRDSI 256
D V+ R ++
Sbjct: 224 DQVVTRQTL 232
>gi|55980584|ref|YP_143881.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB8]
gi|381190341|ref|ZP_09897864.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp. RL]
gi|384430811|ref|YP_005640171.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus SG0.5JP17-16]
gi|386360877|ref|YP_006059122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus JL-18]
gi|60389682|sp|Q72L15.2|CLPP_THET2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460210|sp|Q5SKM8.1|CLPP_THET8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|55771997|dbj|BAD70438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus HB8]
gi|333966279|gb|AEG33044.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus SG0.5JP17-16]
gi|380451934|gb|EIA39535.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp. RL]
gi|383509904|gb|AFH39336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus JL-18]
Length = 194
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 128/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG ID VA+ +++QLL LDAQ+P ++I+L++NSPGG + A +AIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VRA VST+ +GM+AS A++IL G KG+R+A+P+ +VMIHQP GG G D+ I
Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
QA+EI+ K I++ TG+ E+V+KD DRD Y+S EA+EYG+ID V+ R+
Sbjct: 138 QAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVVTREE 193
>gi|452973448|gb|EME73270.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sonorensis
L12]
Length = 198
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D +I+S TG+ E +++D DRD + + EA EYG+ID V+ R
Sbjct: 133 ATEIEIAAKRILSLRDKLNKILSERTGQPLEIIERDTDRDNFKTAEEAKEYGLIDKVLTR 192
Query: 254 D 254
+
Sbjct: 193 N 193
>gi|170767754|ref|ZP_02902207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
gi|170123242|gb|EDS92173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
Length = 207
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|384439472|ref|YP_005654196.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
gi|359290605|gb|AEV16122.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
Length = 198
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ID VA+ I++QLL LDAQ+P ++IRL++NSPGG + A +AIYD +Q
Sbjct: 27 LLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIYDTMQF 86
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VRA VST+ +G++AS A++IL G KG+R+A+P+++VMIHQP GGA G D+ IQA+EI
Sbjct: 87 VRAPVSTIVIGLAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGARGTASDIAIQAQEI 146
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+ K I++ TG+ E+V+KD DRD Y+S EA+ YG+ID V+ R+
Sbjct: 147 LKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALAYGLIDQVVTREE 197
>gi|335041121|ref|ZP_08534237.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334178919|gb|EGL81568.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG IDD VA+++I+QLL L A+DP KD+ L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGTPIDDHVANSVIAQLLFLAAEDPEKDVSLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ +G++AS S +L G KGKRFA+PN+ +M+HQP+GG GQ
Sbjct: 73 AGLAIYDTMQYIKPDVSTICVGLAASMGSFLLAAGAKGKRFALPNSEIMMHQPLGGVKGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D++I A I+ K RI + TG+ E++++D DRD +MS EA EYG++D VI R
Sbjct: 133 AADIKIHADWIIKTKQKLNRIYAERTGQPVEKIERDTDRDFFMSAEEAKEYGLVDQVISR 192
>gi|134094958|ref|YP_001100033.1| ATP-dependent Clp protease proteolytic subunit [Herminiimonas
arsenicoxydans]
gi|133738861|emb|CAL61908.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Herminiimonas arsenicoxydans]
Length = 209
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER++FL ++D A+ I++QLL L++++P KDI
Sbjct: 16 LGMVPMVIEQSGRGERAYDIYSRLLKERVIFLVGPVNDHAANLIVAQLLFLESENPDKDI 75
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q ++ +VST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 76 SLYINSPGGSVSAGMAIFDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRI 135
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ +I++ TG++ E++ +D DRD +MS A
Sbjct: 136 MIHQPLGGAQGQASDIEIQAREILYLRERLNQILADRTGKTLEEISRDTDRDNFMSADAA 195
Query: 242 VEYGIIDGVI 251
VEYG+ID V+
Sbjct: 196 VEYGMIDKVL 205
>gi|448240808|ref|YP_007404861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens WW4]
gi|445211172|gb|AGE16842.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens WW4]
Length = 207
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 126/176 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S S +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG+ EQ+++D +RDR+M+ EAVEYG++DG++ S
Sbjct: 152 HAREILKVKARMNELMAEHTGQPLEQIERDTERDRFMTADEAVEYGLVDGILTHRS 207
>gi|3318853|pdb|1TYF|A Chain A, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318854|pdb|1TYF|B Chain B, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318855|pdb|1TYF|C Chain C, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318856|pdb|1TYF|D Chain D, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318857|pdb|1TYF|E Chain E, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318858|pdb|1TYF|F Chain F, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318859|pdb|1TYF|G Chain G, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318860|pdb|1TYF|H Chain H, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318861|pdb|1TYF|I Chain I, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318862|pdb|1TYF|J Chain J, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318863|pdb|1TYF|K Chain K, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318864|pdb|1TYF|L Chain L, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318865|pdb|1TYF|M Chain M, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318866|pdb|1TYF|N Chain N, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|93278456|pdb|1YG6|A Chain A, Clpp
gi|93278457|pdb|1YG6|B Chain B, Clpp
gi|93278458|pdb|1YG6|C Chain C, Clpp
gi|93278459|pdb|1YG6|D Chain D, Clpp
gi|93278460|pdb|1YG6|E Chain E, Clpp
gi|93278461|pdb|1YG6|F Chain F, Clpp
gi|93278462|pdb|1YG6|G Chain G, Clpp
gi|93278463|pdb|1YG6|H Chain H, Clpp
gi|93278464|pdb|1YG6|I Chain I, Clpp
gi|93278465|pdb|1YG6|J Chain J, Clpp
gi|93278466|pdb|1YG6|K Chain K, Clpp
gi|93278467|pdb|1YG6|L Chain L, Clpp
gi|93278468|pdb|1YG6|M Chain M, Clpp
gi|93278469|pdb|1YG6|N Chain N, Clpp
gi|109157730|pdb|2FZS|A Chain A, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157731|pdb|2FZS|B Chain B, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157732|pdb|2FZS|C Chain C, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157733|pdb|2FZS|D Chain D, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157734|pdb|2FZS|E Chain E, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157735|pdb|2FZS|F Chain F, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157736|pdb|2FZS|G Chain G, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157737|pdb|2FZS|H Chain H, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157738|pdb|2FZS|I Chain I, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157739|pdb|2FZS|J Chain J, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157740|pdb|2FZS|K Chain K, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157741|pdb|2FZS|L Chain L, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157742|pdb|2FZS|M Chain M, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157743|pdb|2FZS|N Chain N, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
Length = 193
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 78 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 138 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIVF+G IDD VA+ +I+QLL L+++DP KDI L++NSPGG ++
Sbjct: 13 RGERAYDIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPGGVVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ LG +AS A+++L G GKR+A+P RVMIHQP+GGA GQ
Sbjct: 73 AGLAIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D++IQAREI+ ++ I++ TG+ E++Q D +RD +MS EA EYGIID V+ R
Sbjct: 133 ATDIQIQAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEAKEYGIIDAVVVR 192
>gi|449484212|ref|XP_004156818.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like [Cucumis sativus]
Length = 306
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 118 LFQYRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMKH 177
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 178 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGTQTDIDIQANEM 237
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR--DSIIPLVPV 262
+H+K N +S TG+S E++ +D DRD +MSP EA++YG+IDGVI ++ PL P
Sbjct: 238 LHHKANLNGYLSYHTGQSLEKINEDTDRDFFMSPKEAIDYGLIDGVIMNPLKALQPLAPT 297
>gi|429083886|ref|ZP_19146912.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
condimenti 1330]
gi|426547240|emb|CCJ72953.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
condimenti 1330]
Length = 189
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 14 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 73
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 74 DTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 133
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 134 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSASEAVEYGLVDSIM 185
>gi|452204950|ref|YP_007485079.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi BTF08]
gi|452112006|gb|AGG07737.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi BTF08]
Length = 200
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
P + P ++ RG A D LLLKERI+FLG+ I+D VA+ +I+QLL LD +DP KD
Sbjct: 4 PENVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKD 63
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
I L+++SPGG +SA +A+YD +QL+R VST+ +G++AS A+++L G KGKR+A+PN
Sbjct: 64 ISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNAT 123
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
+ +HQ MGGA GQ D+EI AREIM +D I+ TG+ E++ D DRD Y+S +
Sbjct: 124 IHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQPMEKIVHDSDRDYYLSAQQ 183
Query: 241 AVEYGIIDGVIDR 253
AVEYG+ID ++ +
Sbjct: 184 AVEYGLIDEILQK 196
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +D +A+ I++QLL LDA+DP KDI L++NSPGGS++
Sbjct: 12 RGERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 72 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA +YG+ID VIDR
Sbjct: 132 ATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDR 191
Query: 254 DS 255
+
Sbjct: 192 HA 193
>gi|259047276|ref|ZP_05737677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella adiacens ATCC 49175]
gi|259036052|gb|EEW37307.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella adiacens ATCC 49175]
Length = 197
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ + I D +A+AII+QLL LDAQDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMVSGPIQDDMANAIIAQLLFLDAQDPEKDIYMYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD + ++ADV T+A+G++AS S +L G KGKR+A+PN ++IHQP+GGA GQ
Sbjct: 73 AGLAIYDTMNFIKADVQTIAMGLAASMGSFLLTAGAKGKRYALPNAEILIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++EI AR+I+ ++ +I++ TG+ +++KD DRD YM+ EA+EYG+ID +++
Sbjct: 133 ATEIEIAARQILKTRERLNKILAKQTGQKLSRIEKDTDRDNYMTAQEALEYGLIDAIME 191
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG ID VA+ I++QLL LD++D KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ FE++ +D +RD +MSP EA YGIID VIDR
Sbjct: 131 ATDIEIQAKEILYHKRRLNEYLADHTGQPFEKISEDTERDFFMSPEEAKNYGIIDEVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|113867496|ref|YP_725985.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
H16]
gi|194289504|ref|YP_002005411.1| ATP-dependent clp protease proteolytic subunit [Cupriavidus
taiwanensis LMG 19424]
gi|339325652|ref|YP_004685345.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
gi|123033071|sp|Q0KBK4.1|CLPP_RALEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706449|sp|B3R4W1.1|CLPP_CUPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113526272|emb|CAJ92617.1| Endopeptidase Clp (type 1) [Ralstonia eutropha H16]
gi|193223339|emb|CAQ69344.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Cupriavidus taiwanensis LMG 19424]
gi|338165809|gb|AEI76864.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
Length = 216
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 144/212 (67%), Gaps = 7/212 (3%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFV 101
R +T+ AL+ Q L P + RG A D LLKER+VF+ ++D
Sbjct: 9 RLATTQASALETQ------GLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQT 62
Query: 102 ADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTA 161
A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DVST+ +GM+AS
Sbjct: 63 ANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMG 122
Query: 162 SLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGR 221
+ +L G KGKR A+PN+R+MIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+
Sbjct: 123 AFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQ 182
Query: 222 SFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
E++ +D DRD +MS +AV+YG+ID V+ R
Sbjct: 183 PVEKIARDTDRDNFMSGDQAVDYGLIDKVLAR 214
>gi|90021255|ref|YP_527082.1| ATP-dependent Clp protease proteolytic subunit [Saccharophagus
degradans 2-40]
gi|116243165|sp|Q21KA9.1|CLPP_SACD2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|89950855|gb|ABD80870.1| ATP-dependent Clp protease proteolytic subunit ClpP [Saccharophagus
degradans 2-40]
Length = 212
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 134/195 (68%), Gaps = 1/195 (0%)
Query: 60 DVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPT 118
+V + P RG + D LLKER++FL ++D +A+ +++Q+L L+A++P
Sbjct: 13 NVENTLVPMVVEQTARGERSYDIYSRLLKERVIFLVGQVEDHMANLVVAQMLFLEAENPD 72
Query: 119 KDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPN 178
KDI L++NSPGGS++A ++IYD +Q ++ DVST+ +G + S + +L G KGKRF +PN
Sbjct: 73 KDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCIGQACSMGAFLLTAGAKGKRFCLPN 132
Query: 179 TRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSP 238
R MIHQP GGA GQ D+ IQA+EI+ ++ I++G TGR E++ +D +RDR+MS
Sbjct: 133 ARTMIHQPSGGAQGQASDIHIQAQEILKLRERLNEIMAGHTGRGVEEIARDTERDRFMSA 192
Query: 239 IEAVEYGIIDGVIDR 253
E+VEYG+ID V++R
Sbjct: 193 HESVEYGLIDKVLER 207
>gi|345023014|ref|ZP_08786627.1| ATP-dependent Clp protease proteolytic subunit [Ornithinibacillus
scapharcae TW25]
Length = 195
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I++QLL L+A+D KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAEDSGKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +++DVST+ GM+AS + +L G KGKR+A+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQYIKSDVSTICTGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ ++N +I+S TG+ + + +D +RD +M+ AVEYG+ID V++R
Sbjct: 133 ATDIEIHAKRILQMRENLNQILSERTGQPIDVINRDTERDNFMTAQGAVEYGLIDKVLER 192
>gi|15800167|ref|NP_286179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EDL933]
gi|15829745|ref|NP_308518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|16128422|ref|NP_414971.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|26246448|ref|NP_752487.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|30061939|ref|NP_836110.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 2457T]
gi|56479658|ref|NP_706331.2| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 301]
gi|74311012|ref|YP_309431.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
Ss046]
gi|82542925|ref|YP_406872.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
Sb227]
gi|82775656|ref|YP_402003.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae Sd197]
gi|91209511|ref|YP_539497.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UTI89]
gi|110640698|ref|YP_668426.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110804465|ref|YP_687985.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri 5
str. 8401]
gi|117622697|ref|YP_851610.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O1]
gi|157158299|ref|YP_001461624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E24377A]
gi|157159964|ref|YP_001457282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HS]
gi|168754541|ref|ZP_02779548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|168768391|ref|ZP_02793398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|168778128|ref|ZP_02803135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|168778929|ref|ZP_02803936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|168786287|ref|ZP_02811294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|170021190|ref|YP_001726144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ATCC 8739]
gi|170080023|ref|YP_001729343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. K-12 substr. DH10B]
gi|170683276|ref|YP_001742581.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SMS-3-5]
gi|187731303|ref|YP_001879148.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii CDC
3083-94]
gi|188492597|ref|ZP_02999867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|191174674|ref|ZP_03036146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|193064129|ref|ZP_03045213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|195938496|ref|ZP_03083878.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208809540|ref|ZP_03251877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208815859|ref|ZP_03257038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208822964|ref|ZP_03263282.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209917654|ref|YP_002291738.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215485518|ref|YP_002327949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217326412|ref|ZP_03442496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218549895|ref|YP_002383686.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ATCC 35469]
gi|218553004|ref|YP_002385917.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI1]
gi|218557347|ref|YP_002390260.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S88]
gi|218688301|ref|YP_002396513.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ED1a]
gi|218693900|ref|YP_002401567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
55989]
gi|218698651|ref|YP_002406280.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI39]
gi|218703721|ref|YP_002411240.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UMN026]
gi|222155227|ref|YP_002555366.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227884552|ref|ZP_04002357.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238899725|ref|YP_002925521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BW2952]
gi|251783945|ref|YP_002998249.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253774574|ref|YP_003037405.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160506|ref|YP_003043614.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|254287310|ref|YP_003053058.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254791621|ref|YP_003076458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. TW14359]
gi|260842638|ref|YP_003220416.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|260853660|ref|YP_003227551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|260866598|ref|YP_003233000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|261223919|ref|ZP_05938200.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. FRIK2000]
gi|261256367|ref|ZP_05948900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. FRIK966]
gi|291281344|ref|YP_003498162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|293403558|ref|ZP_06647649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|293408587|ref|ZP_06652426.1| Clp protease [Escherichia coli B354]
gi|297516115|ref|ZP_06934501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
OP50]
gi|298379170|ref|ZP_06989051.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|300818231|ref|ZP_07098442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300820317|ref|ZP_07100469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300903295|ref|ZP_07121223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300918180|ref|ZP_07134787.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300930260|ref|ZP_07145673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300947910|ref|ZP_07162058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|301025667|ref|ZP_07189185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|301330696|ref|ZP_07223298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|306813096|ref|ZP_07447289.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|307312185|ref|ZP_07591821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|309794830|ref|ZP_07689251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|331640957|ref|ZP_08342092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331645613|ref|ZP_08346717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331651375|ref|ZP_08352400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331656494|ref|ZP_08357456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331661818|ref|ZP_08362741.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331666792|ref|ZP_08367666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331671984|ref|ZP_08372780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331676109|ref|ZP_08376821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331681832|ref|ZP_08382465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|366160317|ref|ZP_09460179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
TW09308]
gi|378714157|ref|YP_005279050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|383177027|ref|YP_005455032.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
53G]
gi|384541993|ref|YP_005726054.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|386596687|ref|YP_006093087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|386598154|ref|YP_006099660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|386605609|ref|YP_006111909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|386607800|ref|YP_006123286.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|386622809|ref|YP_006142537.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|386628026|ref|YP_006147746.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|386632946|ref|YP_006152665.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|386637852|ref|YP_006104650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|386702756|ref|YP_006166593.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|386703656|ref|YP_006167503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|386708240|ref|YP_006171961.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|387505454|ref|YP_006157710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|387605947|ref|YP_006094803.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|387610962|ref|YP_006114078.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|387615754|ref|YP_006118776.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620196|ref|YP_006127823.1| hypothetical protein ECDH1ME8569_0422 [Escherichia coli DH1]
gi|387828451|ref|YP_003348388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|387881033|ref|YP_006311335.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388476543|ref|YP_488729.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. W3110]
gi|404373759|ref|ZP_10978994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|407467887|ref|YP_006785671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483383|ref|YP_006780532.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483936|ref|YP_006771482.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|416273477|ref|ZP_11643392.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|416287650|ref|ZP_11648936.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|416296133|ref|ZP_11651339.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|416312992|ref|ZP_11657927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|416316808|ref|ZP_11659940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|416325624|ref|ZP_11666032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|416334479|ref|ZP_11671387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|416341381|ref|ZP_11676004.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|416780506|ref|ZP_11876892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|416791657|ref|ZP_11881790.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|416803300|ref|ZP_11886651.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|416811871|ref|ZP_11890144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97]
gi|416822832|ref|ZP_11895159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835006|ref|ZP_11901254.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|417082904|ref|ZP_11951073.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|417114443|ref|ZP_11965714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|417121175|ref|ZP_11970629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|417134652|ref|ZP_11979437.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|417139755|ref|ZP_11983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|417144466|ref|ZP_11986272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|417152903|ref|ZP_11991694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|417168750|ref|ZP_12001201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|417174458|ref|ZP_12004254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|417179207|ref|ZP_12007307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|417190845|ref|ZP_12013441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|417218290|ref|ZP_12023892.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|417225434|ref|ZP_12028725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|417247136|ref|ZP_12040237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|417253476|ref|ZP_12045235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|417260673|ref|ZP_12048171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|417267200|ref|ZP_12054561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|417270620|ref|ZP_12057973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|417275444|ref|ZP_12062781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|417284212|ref|ZP_12071507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|417288247|ref|ZP_12075532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|417293158|ref|ZP_12080438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|417299495|ref|ZP_12086725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|417306939|ref|ZP_12093819.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|417661013|ref|ZP_12310594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|417754233|ref|ZP_12402328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|417803792|ref|ZP_12450827.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|417826439|ref|ZP_12473017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|417831544|ref|ZP_12478066.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|417867743|ref|ZP_12512778.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|417945744|ref|ZP_12588973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|417976590|ref|ZP_12617382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|418253617|ref|ZP_12878642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|418262477|ref|ZP_12883856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|418941047|ref|ZP_13494387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|419000594|ref|ZP_13548156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|419006128|ref|ZP_13553584.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|419011995|ref|ZP_13559360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|419016899|ref|ZP_13564225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|419022590|ref|ZP_13569832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|419027401|ref|ZP_13574601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|419033183|ref|ZP_13580281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|419038181|ref|ZP_13585241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|419043480|ref|ZP_13590454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|419055094|ref|ZP_13601952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|419060688|ref|ZP_13607473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|419066566|ref|ZP_13613247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|419073638|ref|ZP_13619211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|419078751|ref|ZP_13624236.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|419084402|ref|ZP_13629818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|419096498|ref|ZP_13641742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|419102072|ref|ZP_13647239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|419107525|ref|ZP_13652635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|419113292|ref|ZP_13658327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|419118878|ref|ZP_13663863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|419124476|ref|ZP_13669380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|419130098|ref|ZP_13674951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|419134856|ref|ZP_13679665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|419140968|ref|ZP_13685725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|419152270|ref|ZP_13696858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|419157778|ref|ZP_13702304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|419162710|ref|ZP_13707190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|419168433|ref|ZP_13712831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|419173782|ref|ZP_13717638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|419179426|ref|ZP_13723051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|419184984|ref|ZP_13728506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|419190232|ref|ZP_13733700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|419195534|ref|ZP_13738942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|419201573|ref|ZP_13744801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|419207438|ref|ZP_13750566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|419213878|ref|ZP_13756910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|419219702|ref|ZP_13762659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|419225166|ref|ZP_13768056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|419230910|ref|ZP_13773702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|419236285|ref|ZP_13779036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|419241879|ref|ZP_13784529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|419247288|ref|ZP_13789903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|419253064|ref|ZP_13795614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|419259073|ref|ZP_13801533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|419265176|ref|ZP_13807563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|419270761|ref|ZP_13813094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|419276559|ref|ZP_13818829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|419282161|ref|ZP_13824383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|419287902|ref|ZP_13830020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|419293241|ref|ZP_13835302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|419298681|ref|ZP_13840699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|419304965|ref|ZP_13846879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|419309990|ref|ZP_13851867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|419315309|ref|ZP_13857137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|419321085|ref|ZP_13862828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|419327332|ref|ZP_13868965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|419332742|ref|ZP_13874306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|419339678|ref|ZP_13881155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|419344085|ref|ZP_13885469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|419353421|ref|ZP_13894707.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|419358764|ref|ZP_13899995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|419363857|ref|ZP_13905039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|419368721|ref|ZP_13909850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|419373906|ref|ZP_13914962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|419379324|ref|ZP_13920305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|419384580|ref|ZP_13925484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|419699353|ref|ZP_14226969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|419811819|ref|ZP_14336691.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|419862464|ref|ZP_14385069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|419867899|ref|ZP_14390213.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|419876969|ref|ZP_14398628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|419882604|ref|ZP_14403814.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|419888442|ref|ZP_14408949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|419893037|ref|ZP_14413043.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|419900593|ref|ZP_14420019.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|419906391|ref|ZP_14425303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|419915478|ref|ZP_14433843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|419916845|ref|ZP_14435129.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|419923190|ref|ZP_14441152.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|419928055|ref|ZP_14445775.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|419937108|ref|ZP_14454024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|419945558|ref|ZP_14461997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|419948924|ref|ZP_14465187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|420088256|ref|ZP_14600160.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|420092934|ref|ZP_14604624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|420103064|ref|ZP_14613978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|420109693|ref|ZP_14619793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|420113374|ref|ZP_14623117.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|420119640|ref|ZP_14628905.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|420125718|ref|ZP_14634509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|420130828|ref|ZP_14639308.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|420267737|ref|ZP_14770144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|420278960|ref|ZP_14781227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|420284842|ref|ZP_14787060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|420290573|ref|ZP_14792738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|420296234|ref|ZP_14798331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|420302234|ref|ZP_14804266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|420307840|ref|ZP_14809814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|420313332|ref|ZP_14815240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|420318881|ref|ZP_14820738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|420324044|ref|ZP_14825830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|420329691|ref|ZP_14831396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|420334604|ref|ZP_14836226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|420340003|ref|ZP_14841530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|420351206|ref|ZP_14852405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|420357063|ref|ZP_14858079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|420361980|ref|ZP_14862906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|420378645|ref|ZP_14878144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|420384075|ref|ZP_14883463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|420389777|ref|ZP_14889050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|421681140|ref|ZP_16120970.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|421777839|ref|ZP_16214429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|421810660|ref|ZP_16246471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|421816753|ref|ZP_16252316.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|421822138|ref|ZP_16257576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|421828871|ref|ZP_16264201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|422330694|ref|ZP_16411711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|422748496|ref|ZP_16802409.1| Clp protease [Escherichia coli H252]
gi|422753090|ref|ZP_16806917.1| Clp protease [Escherichia coli H263]
gi|422763232|ref|ZP_16816987.1| Clp protease [Escherichia coli E1167]
gi|422764968|ref|ZP_16818695.1| Clp protease [Escherichia coli E1520]
gi|422769666|ref|ZP_16823357.1| Clp protease [Escherichia coli E482]
gi|422777134|ref|ZP_16830787.1| Clp protease [Escherichia coli H120]
gi|422782770|ref|ZP_16835555.1| Clp protease [Escherichia coli TW10509]
gi|422785047|ref|ZP_16837786.1| Clp protease [Escherichia coli H489]
gi|422791245|ref|ZP_16843948.1| Clp protease [Escherichia coli TA007]
gi|422802318|ref|ZP_16850812.1| Clp protease [Escherichia coli M863]
gi|422804516|ref|ZP_16852948.1| Clp protease [Escherichia fergusonii B253]
gi|422816451|ref|ZP_16864666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|422830602|ref|ZP_16878758.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|422835147|ref|ZP_16883204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|422838959|ref|ZP_16886931.1| Clp protease [Escherichia coli H397]
gi|422960324|ref|ZP_16971772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|422974758|ref|ZP_16976459.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|422991153|ref|ZP_16981924.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|422993092|ref|ZP_16983856.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|422998303|ref|ZP_16989059.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|423006764|ref|ZP_16997507.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|423008407|ref|ZP_16999145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|423022594|ref|ZP_17013297.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|423027748|ref|ZP_17018441.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|423033585|ref|ZP_17024269.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|423036451|ref|ZP_17027125.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041571|ref|ZP_17032238.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048257|ref|ZP_17038914.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423051841|ref|ZP_17040649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058806|ref|ZP_17047602.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423652932|ref|ZP_17628235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|423701218|ref|ZP_17675677.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|423710208|ref|ZP_17684558.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|424075299|ref|ZP_17812663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|424081627|ref|ZP_17818503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|424088248|ref|ZP_17824523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|424113671|ref|ZP_17847839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|424132076|ref|ZP_17864895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|424145062|ref|ZP_17876849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|424151208|ref|ZP_17882479.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|424184946|ref|ZP_17887912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|424266451|ref|ZP_17893814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|424421800|ref|ZP_17899543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|424459914|ref|ZP_17910872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|424472944|ref|ZP_17922637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|424478892|ref|ZP_17928155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|424484962|ref|ZP_17933846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|424491084|ref|ZP_17939498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|424498173|ref|ZP_17945463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|424504402|ref|ZP_17951198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|424510660|ref|ZP_17956914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|424518228|ref|ZP_17962674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|424524057|ref|ZP_17968098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|424530265|ref|ZP_17973911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|424536239|ref|ZP_17979518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|424542147|ref|ZP_17984984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|424548471|ref|ZP_17990695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|424554735|ref|ZP_17996473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|424561082|ref|ZP_18002383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|424567110|ref|ZP_18008042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|424747928|ref|ZP_18176080.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424766683|ref|ZP_18194028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424768157|ref|ZP_18195449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|424836929|ref|ZP_18261566.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|425095924|ref|ZP_18498965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|425102063|ref|ZP_18504728.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|425123686|ref|ZP_18525280.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|425129726|ref|ZP_18530842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|425136066|ref|ZP_18536805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|425141966|ref|ZP_18542273.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|425153902|ref|ZP_18553465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|425160351|ref|ZP_18559540.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|425165861|ref|ZP_18564685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|425178034|ref|ZP_18576103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|425197263|ref|ZP_18593928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|425209679|ref|ZP_18605430.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|425215719|ref|ZP_18611052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|425222289|ref|ZP_18617163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|425228534|ref|ZP_18622945.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|425234834|ref|ZP_18628808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|425240839|ref|ZP_18634489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|425246963|ref|ZP_18640187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|425252694|ref|ZP_18645586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|425259005|ref|ZP_18651383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|425265103|ref|ZP_18657041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|425281805|ref|ZP_18672926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|425292563|ref|ZP_18683162.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|425303944|ref|ZP_18693733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|425309306|ref|ZP_18698786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|425315219|ref|ZP_18704309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|425327464|ref|ZP_18715700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|425333649|ref|ZP_18721382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|425340070|ref|ZP_18727325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|425352161|ref|ZP_18738555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|425358151|ref|ZP_18744137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|425364261|ref|ZP_18749824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|425370706|ref|ZP_18755682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|425377258|ref|ZP_18761660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|425383500|ref|ZP_18767391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|425390200|ref|ZP_18773670.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|425396318|ref|ZP_18779376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|425402303|ref|ZP_18784919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|425408844|ref|ZP_18791011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|425415114|ref|ZP_18796764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|425421050|ref|ZP_18802281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|425426270|ref|ZP_18807331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|427803504|ref|ZP_18970571.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|427808122|ref|ZP_18975187.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|428951073|ref|ZP_19023219.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|428956929|ref|ZP_19028639.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|428963261|ref|ZP_19034457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|428969331|ref|ZP_19039973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|428975890|ref|ZP_19046071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|428981655|ref|ZP_19051401.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|428987879|ref|ZP_19057179.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|428993691|ref|ZP_19062606.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|428999790|ref|ZP_19068308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|429006032|ref|ZP_19073956.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|429012377|ref|ZP_19079638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|429018591|ref|ZP_19085384.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|429030581|ref|ZP_19096467.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|429036767|ref|ZP_19102216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|429042639|ref|ZP_19107653.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|429048495|ref|ZP_19113155.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|429053858|ref|ZP_19118354.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|429059551|ref|ZP_19123703.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|429064996|ref|ZP_19128865.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429071563|ref|ZP_19134920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|429722633|ref|ZP_19257531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774730|ref|ZP_19306733.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429779993|ref|ZP_19311946.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784045|ref|ZP_19315958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429789383|ref|ZP_19321258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429795613|ref|ZP_19327439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429801539|ref|ZP_19333317.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429805171|ref|ZP_19336918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429809982|ref|ZP_19341684.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429815742|ref|ZP_19347401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429821330|ref|ZP_19352943.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429824044|ref|ZP_19355561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429830412|ref|ZP_19361279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429907004|ref|ZP_19372973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911202|ref|ZP_19377158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917038|ref|ZP_19382978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922076|ref|ZP_19387997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429927894|ref|ZP_19393800.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429931826|ref|ZP_19397721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933428|ref|ZP_19399318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939082|ref|ZP_19404956.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946725|ref|ZP_19412580.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949357|ref|ZP_19415205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957641|ref|ZP_19423470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432352100|ref|ZP_19595409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|432356781|ref|ZP_19600028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|432361188|ref|ZP_19604385.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|432368416|ref|ZP_19611521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|432371211|ref|ZP_19614275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|432375520|ref|ZP_19618534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|432380065|ref|ZP_19623029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|432385894|ref|ZP_19628793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|432390365|ref|ZP_19633229.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|432396311|ref|ZP_19639103.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|432400549|ref|ZP_19643309.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|432405307|ref|ZP_19648030.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|432410506|ref|ZP_19653189.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|432415389|ref|ZP_19658020.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|432420547|ref|ZP_19663105.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|432429586|ref|ZP_19672046.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|432430553|ref|ZP_19672998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|432435082|ref|ZP_19677483.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|432439750|ref|ZP_19682113.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|432444874|ref|ZP_19687183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|432453235|ref|ZP_19695475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|432455365|ref|ZP_19697567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|432459408|ref|ZP_19701572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|432464449|ref|ZP_19706557.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|432469870|ref|ZP_19711923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|432474457|ref|ZP_19716470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|432479798|ref|ZP_19721763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|432484165|ref|ZP_19726089.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|432492733|ref|ZP_19734572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|432494306|ref|ZP_19736124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|432498681|ref|ZP_19740461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|432503145|ref|ZP_19744882.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|432512645|ref|ZP_19749888.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|432521074|ref|ZP_19758239.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|432522590|ref|ZP_19759729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|432529805|ref|ZP_19766849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|432541291|ref|ZP_19778166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|432541813|ref|ZP_19778674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|432547157|ref|ZP_19783954.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|432552445|ref|ZP_19789177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|432557454|ref|ZP_19794147.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|432562347|ref|ZP_19798974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|432567276|ref|ZP_19803803.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|432572432|ref|ZP_19808923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|432579114|ref|ZP_19815548.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|432582548|ref|ZP_19818958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|432586736|ref|ZP_19823108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|432591556|ref|ZP_19827885.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|432596322|ref|ZP_19832611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|432600954|ref|ZP_19837209.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|432606322|ref|ZP_19842518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|432610171|ref|ZP_19846344.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|432615211|ref|ZP_19851346.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|432620540|ref|ZP_19856586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|432626021|ref|ZP_19862006.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|432630007|ref|ZP_19865957.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|432635751|ref|ZP_19871637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|432639556|ref|ZP_19875401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|432644872|ref|ZP_19880675.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|432649965|ref|ZP_19885727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|432654447|ref|ZP_19890166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|432659679|ref|ZP_19895340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|432664625|ref|ZP_19900221.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|432669369|ref|ZP_19904918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|432678032|ref|ZP_19913458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|432678859|ref|ZP_19914262.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|432684270|ref|ZP_19919589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|432690327|ref|ZP_19925573.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|432693221|ref|ZP_19928436.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|432697754|ref|ZP_19932926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|432703009|ref|ZP_19938135.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|432709268|ref|ZP_19944337.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|432712158|ref|ZP_19947210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|432717449|ref|ZP_19952451.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|432722000|ref|ZP_19956927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|432726546|ref|ZP_19961429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|432731162|ref|ZP_19966001.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|432735963|ref|ZP_19970739.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|432740233|ref|ZP_19974955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|432744374|ref|ZP_19979079.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|432748893|ref|ZP_19983516.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|432753234|ref|ZP_19987802.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|432758222|ref|ZP_19992745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|432763728|ref|ZP_19998180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|432769238|ref|ZP_20003611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|432773617|ref|ZP_20007907.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|432777289|ref|ZP_20011543.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|432782345|ref|ZP_20016531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|432786085|ref|ZP_20020253.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|432791686|ref|ZP_20025780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|432797653|ref|ZP_20031681.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|432800720|ref|ZP_20034710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|432804518|ref|ZP_20038464.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|432812549|ref|ZP_20046398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|432813933|ref|ZP_20047744.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|432819756|ref|ZP_20053470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|432825885|ref|ZP_20059542.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|432830425|ref|ZP_20064034.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|432833493|ref|ZP_20067041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|432837986|ref|ZP_20071479.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|432842724|ref|ZP_20076145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|432848215|ref|ZP_20080087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|432859093|ref|ZP_20085267.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|432873099|ref|ZP_20092797.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|432879929|ref|ZP_20096749.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|432884403|ref|ZP_20099359.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|432893053|ref|ZP_20105158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|432897224|ref|ZP_20108220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|432902770|ref|ZP_20112450.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|432910123|ref|ZP_20117250.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|432917569|ref|ZP_20122100.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|432924874|ref|ZP_20127013.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|432932774|ref|ZP_20132628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|432942310|ref|ZP_20139652.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|432945103|ref|ZP_20141398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|432953570|ref|ZP_20145869.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|432959821|ref|ZP_20150107.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|432966548|ref|ZP_20155468.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|432970614|ref|ZP_20159492.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|432977159|ref|ZP_20165984.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|432979941|ref|ZP_20168722.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|432984129|ref|ZP_20172868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|432989542|ref|ZP_20178212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|432994232|ref|ZP_20182849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|432998651|ref|ZP_20187191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|433003963|ref|ZP_20192401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|433011171|ref|ZP_20199576.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|433012611|ref|ZP_20200994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|433017393|ref|ZP_20205664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|433022184|ref|ZP_20210210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|433027479|ref|ZP_20215355.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|433031873|ref|ZP_20219688.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|433037373|ref|ZP_20224994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|433041917|ref|ZP_20229452.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|433046508|ref|ZP_20233940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|433051736|ref|ZP_20238974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|433056775|ref|ZP_20243862.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|433061654|ref|ZP_20248620.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|433066645|ref|ZP_20253489.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|433071486|ref|ZP_20258188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|433076635|ref|ZP_20263201.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|433081384|ref|ZP_20267859.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|433086041|ref|ZP_20272445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|433090761|ref|ZP_20277069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|433095304|ref|ZP_20281520.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|433099985|ref|ZP_20286097.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|433104572|ref|ZP_20290595.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|433109689|ref|ZP_20295569.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|433114388|ref|ZP_20300204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|433118986|ref|ZP_20304700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|433124005|ref|ZP_20309596.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|433128765|ref|ZP_20314245.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|433133585|ref|ZP_20318968.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|433138066|ref|ZP_20323353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|433142999|ref|ZP_20328178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|433147894|ref|ZP_20332960.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|433152581|ref|ZP_20337551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|433157380|ref|ZP_20342256.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|433162251|ref|ZP_20347016.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|433167226|ref|ZP_20351902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|433172307|ref|ZP_20356867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|433176883|ref|ZP_20361350.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|433181970|ref|ZP_20366273.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|433187242|ref|ZP_20371371.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|433192367|ref|ZP_20376389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|433197024|ref|ZP_20380953.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|433201858|ref|ZP_20385670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|433206587|ref|ZP_20390288.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|433211367|ref|ZP_20394982.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|442590116|ref|ZP_21008900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442596446|ref|ZP_21014257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442606706|ref|ZP_21021501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443616464|ref|YP_007380320.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444922755|ref|ZP_21242478.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444929077|ref|ZP_21248231.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444934427|ref|ZP_21253371.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444940006|ref|ZP_21258655.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444945649|ref|ZP_21264071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444951153|ref|ZP_21269379.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444956607|ref|ZP_21274609.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444961951|ref|ZP_21279705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444967642|ref|ZP_21285119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444973144|ref|ZP_21290427.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444983978|ref|ZP_21300848.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444989221|ref|ZP_21305963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444994575|ref|ZP_21311172.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|445000071|ref|ZP_21316535.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|445005527|ref|ZP_21321868.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|445010700|ref|ZP_21326894.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|445016482|ref|ZP_21332533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|445021929|ref|ZP_21337852.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|445027171|ref|ZP_21342951.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|445032666|ref|ZP_21348292.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|445038359|ref|ZP_21353830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|445043574|ref|ZP_21358914.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|445049146|ref|ZP_21364317.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|445054796|ref|ZP_21369749.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|450185742|ref|ZP_21889212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|450211060|ref|ZP_21894199.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|450239654|ref|ZP_21899081.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
gi|452969098|ref|ZP_21967325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4009]
gi|62288033|sp|P0A6G7.1|CLPP_ECOLI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Heat shock protein
F21.5; AltName: Full=Protease Ti; Flags: Precursor
gi|62288034|sp|P0A6G8.1|CLPP_ECOL6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288035|sp|P0A6G9.1|CLPP_ECO57 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288036|sp|P0A6H0.1|CLPP_SHIFL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183183|sp|Q325G4.1|CLPP_SHIBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183184|sp|Q32JJ3.1|CLPP_SHIDS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816465|sp|Q3Z4W6.1|CLPP_SHISS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243134|sp|Q0TKK4.1|CLPP_ECOL5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|116243136|sp|Q1RF98.1|CLPP_ECOUT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|122957620|sp|Q0T7E6.1|CLPP_SHIF8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201821|sp|A1A8A6.1|CLPP_ECOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008648|sp|A7ZIJ5.1|CLPP_ECO24 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008649|sp|A7ZX95.1|CLPP_ECOHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082457|sp|B1J011.1|CLPP_ECOLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|310942734|pdb|3MT6|R Chain R, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942735|pdb|3MT6|S Chain S, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942736|pdb|3MT6|T Chain T, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942737|pdb|3MT6|U Chain U, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942738|pdb|3MT6|O Chain O, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942739|pdb|3MT6|P Chain P, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942740|pdb|3MT6|Q Chain Q, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942741|pdb|3MT6|Y Chain Y, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942742|pdb|3MT6|Z Chain Z, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942743|pdb|3MT6|AA Chain a, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942744|pdb|3MT6|BB Chain b, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942745|pdb|3MT6|V Chain V, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942746|pdb|3MT6|W Chain W, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942747|pdb|3MT6|X Chain X, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942748|pdb|3MT6|M Chain M, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942749|pdb|3MT6|L Chain L, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942750|pdb|3MT6|K Chain K, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942751|pdb|3MT6|J Chain J, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942752|pdb|3MT6|I Chain I, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942753|pdb|3MT6|H Chain H, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942754|pdb|3MT6|N Chain N, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942755|pdb|3MT6|F Chain F, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942756|pdb|3MT6|E Chain E, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942757|pdb|3MT6|D Chain D, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942758|pdb|3MT6|C Chain C, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942759|pdb|3MT6|B Chain B, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942760|pdb|3MT6|A Chain A, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942761|pdb|3MT6|G Chain G, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|12513299|gb|AAG54787.1|AE005223_2 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli O157:H7 str.
EDL933]
gi|26106846|gb|AAN79031.1|AE016756_214 ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|145556|gb|AAA23588.1| ATP-dependent protease (clpP) [Escherichia coli]
gi|1773121|gb|AAB40193.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786641|gb|AAC73540.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|13359948|dbj|BAB33914.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli O157:H7 str. Sakai]
gi|30040183|gb|AAP15916.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str.
2457T]
gi|56383209|gb|AAN42038.2| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str. 301]
gi|73854489|gb|AAZ87196.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella sonnei Ss046]
gi|81239804|gb|ABB60514.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella dysenteriae Sd197]
gi|81244336|gb|ABB65044.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella boydii Sb227]
gi|85674577|dbj|BAE76217.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K12 substr. W3110]
gi|91071085|gb|ABE05966.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Escherichia coli UTI89]
gi|110342290|gb|ABG68527.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110614013|gb|ABF02680.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella flexneri 5 str. 8401]
gi|115511821|gb|ABI99895.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Escherichia coli APEC O1]
gi|157065644|gb|ABV04899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli HS]
gi|157080329|gb|ABV20037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E24377A]
gi|169756118|gb|ACA78817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ATCC 8739]
gi|169887858|gb|ACB01565.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. DH10B]
gi|170520994|gb|ACB19172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli SMS-3-5]
gi|187428295|gb|ACD07569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii CDC 3083-94]
gi|187766815|gb|EDU30659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|188487796|gb|EDU62899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|189003087|gb|EDU72073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|189358046|gb|EDU76465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|189362475|gb|EDU80894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|189373600|gb|EDU92016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|190905047|gb|EDV64714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|192929158|gb|EDV82768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|208729341|gb|EDZ78942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208732507|gb|EDZ81195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208737157|gb|EDZ84841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209743854|gb|ACI70234.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743856|gb|ACI70235.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743858|gb|ACI70236.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743860|gb|ACI70237.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743862|gb|ACI70238.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209910913|dbj|BAG75987.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215263590|emb|CAS07920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O127:H6 str. E2348/69]
gi|217322633|gb|EEC31057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218350632|emb|CAU96324.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli 55989]
gi|218357436|emb|CAQ90075.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia fergusonii ATCC 35469]
gi|218359772|emb|CAQ97313.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI1]
gi|218364116|emb|CAR01781.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli S88]
gi|218368637|emb|CAR16376.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI39]
gi|218425865|emb|CAR06671.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli ED1a]
gi|218430818|emb|CAR11692.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli UMN026]
gi|222032232|emb|CAP74971.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227838638|gb|EEJ49104.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238863325|gb|ACR65323.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli BW2952]
gi|242376218|emb|CAQ30909.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253325618|gb|ACT30220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972407|gb|ACT38078.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|253976617|gb|ACT42287.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254591021|gb|ACT70382.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. TW14359]
gi|257752309|dbj|BAI23811.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|257757785|dbj|BAI29282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|257762954|dbj|BAI34449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|260450376|gb|ACX40798.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|281177608|dbj|BAI53938.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|281599777|gb|ADA72761.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|284920247|emb|CBG33306.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|290761217|gb|ADD55178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|291429411|gb|EFF02431.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|291471765|gb|EFF14248.1| Clp protease [Escherichia coli B354]
gi|294492533|gb|ADE91289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|298280283|gb|EFI21787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|299880021|gb|EFI88232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|300404590|gb|EFJ88128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300414631|gb|EFJ97941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300452510|gb|EFK16130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|300461832|gb|EFK25325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300527102|gb|EFK48171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300529122|gb|EFK50184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300843357|gb|EFK71117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|305853859|gb|EFM54298.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|306907687|gb|EFN38189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|307552344|gb|ADN45119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|307628093|gb|ADN72397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|308121483|gb|EFO58745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|309700698|emb|CBI99994.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|312945015|gb|ADR25842.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|315059717|gb|ADT74044.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|315135119|dbj|BAJ42278.1| conserved hypothetical protein [Escherichia coli DH1]
gi|320173743|gb|EFW48926.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|320178281|gb|EFW53255.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|320186067|gb|EFW60812.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|320192853|gb|EFW67493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|320197089|gb|EFW71708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|320201681|gb|EFW76257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|320638432|gb|EFX08146.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|320643812|gb|EFX12935.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|320649163|gb|EFX17741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|320656056|gb|EFX23972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661206|gb|EFX28637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665182|gb|EFX32275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|323379718|gb|ADX51986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|323938623|gb|EGB34872.1| Clp protease [Escherichia coli E1520]
gi|323943244|gb|EGB39400.1| Clp protease [Escherichia coli E482]
gi|323945342|gb|EGB41398.1| Clp protease [Escherichia coli H120]
gi|323952951|gb|EGB48819.1| Clp protease [Escherichia coli H252]
gi|323958630|gb|EGB54333.1| Clp protease [Escherichia coli H263]
gi|323963427|gb|EGB58989.1| Clp protease [Escherichia coli H489]
gi|323965124|gb|EGB60583.1| Clp protease [Escherichia coli M863]
gi|323972291|gb|EGB67501.1| Clp protease [Escherichia coli TA007]
gi|323976078|gb|EGB71171.1| Clp protease [Escherichia coli TW10509]
gi|324114664|gb|EGC08632.1| Clp protease [Escherichia fergusonii B253]
gi|324116925|gb|EGC10838.1| Clp protease [Escherichia coli E1167]
gi|326341201|gb|EGD64993.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|326346024|gb|EGD69763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|330910231|gb|EGH38741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|331037755|gb|EGI09975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331045775|gb|EGI17901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331051116|gb|EGI23168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331054742|gb|EGI26751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331060240|gb|EGI32204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331066016|gb|EGI37900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331070973|gb|EGI42332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331076167|gb|EGI47449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331081034|gb|EGI52199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|335577004|gb|EGM63237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|338771515|gb|EGP26255.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|340735696|gb|EGR64752.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|340741501|gb|EGR75647.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|341921032|gb|EGT70636.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|342362476|gb|EGU26594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|344193757|gb|EGV47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|349736547|gb|AEQ11253.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|354858263|gb|EHF18714.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|354860139|gb|EHF20586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|354866835|gb|EHF27258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|354877171|gb|EHF37531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|354879478|gb|EHF39816.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|354884065|gb|EHF44379.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|354885866|gb|EHF46158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|354888933|gb|EHF49187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|354901534|gb|EHF61661.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354905765|gb|EHF65848.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354908272|gb|EHF68328.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354918744|gb|EHF78700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354922432|gb|EHF82347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|355353088|gb|EHG02260.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|355418925|gb|AER83122.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|355423845|gb|AER88041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|359331197|dbj|BAL37644.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MDS42]
gi|371594122|gb|EHN82994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|371595518|gb|EHN84367.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|371604298|gb|EHN92927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|371611430|gb|EHN99952.1| Clp protease [Escherichia coli H397]
gi|371612952|gb|EHO01455.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|373248398|gb|EHP67828.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|374357448|gb|AEZ39155.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|375323616|gb|EHS69321.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|377850929|gb|EHU15884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|377854084|gb|EHU18974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|377862760|gb|EHU27567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|377866873|gb|EHU31637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|377868228|gb|EHU32972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|377879179|gb|EHU43752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|377883602|gb|EHU48120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|377885903|gb|EHU50394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|377898425|gb|EHU62785.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|377900553|gb|EHU64885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|377914360|gb|EHU78483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|377918753|gb|EHU82800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|377920840|gb|EHU84855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|377932504|gb|EHU96358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|377934476|gb|EHU98307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|377940607|gb|EHV04356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|377951398|gb|EHV15017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|377955447|gb|EHV19003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|377966083|gb|EHV29496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|377967396|gb|EHV30802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|377973509|gb|EHV36849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|377981472|gb|EHV44731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|377981714|gb|EHV44972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|377988579|gb|EHV51757.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|378000301|gb|EHV63375.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|378003854|gb|EHV66894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|378014252|gb|EHV77158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|378017176|gb|EHV80051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|378018839|gb|EHV81685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|378027887|gb|EHV90512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|378032402|gb|EHV94983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|378037735|gb|EHW00258.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|378042335|gb|EHW04784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|378052755|gb|EHW15057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|378057167|gb|EHW19402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|378063094|gb|EHW25264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|378069189|gb|EHW31284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|378072756|gb|EHW34813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|378081868|gb|EHW43816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|378082738|gb|EHW44681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|378090507|gb|EHW52344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|378095202|gb|EHW56992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|378102386|gb|EHW64063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|378107900|gb|EHW69518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|378116922|gb|EHW78440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|378119411|gb|EHW80906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|378121706|gb|EHW83157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|378134748|gb|EHW96069.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|378136536|gb|EHW97830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|378139984|gb|EHX01214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|378147352|gb|EHX08500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|378153094|gb|EHX14180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|378157257|gb|EHX18299.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|378161713|gb|EHX22689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|378175102|gb|EHX35921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|378175608|gb|EHX36424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|378177102|gb|EHX37903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|378190584|gb|EHX51168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|378191144|gb|EHX51720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|378191957|gb|EHX52531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|378208329|gb|EHX68713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|378209338|gb|EHX69712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|378219877|gb|EHX80144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|378221927|gb|EHX82169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|378226320|gb|EHX86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|378234469|gb|EHX94547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|378237158|gb|EHX97185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|380349368|gb|EIA37640.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|383101824|gb|AFG39333.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|383394283|gb|AFH19241.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|383403932|gb|AFH10175.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|383465981|gb|EID61002.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|385155302|gb|EIF17306.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|385539924|gb|EIF86751.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|385704856|gb|EIG41928.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|385712908|gb|EIG49847.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|386141518|gb|EIG82668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|386148905|gb|EIG95340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|386152506|gb|EIH03795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|386157483|gb|EIH13825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|386164349|gb|EIH26135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|386169627|gb|EIH36135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|386170798|gb|EIH42851.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|386177150|gb|EIH54629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|386186459|gb|EIH69175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|386191817|gb|EIH80558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|386193173|gb|EIH87472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|386200482|gb|EIH99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|386209764|gb|EII20251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|386217407|gb|EII33896.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|386225831|gb|EII48156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|386229558|gb|EII56913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|386236963|gb|EII68935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|386242097|gb|EII79010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|386242421|gb|EII84156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|386247039|gb|EII93212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|386252730|gb|EIJ02421.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|386257287|gb|EIJ12778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|386794491|gb|AFJ27525.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388341952|gb|EIL08029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|388345221|gb|EIL11007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|388346439|gb|EIL12156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|388360312|gb|EIL24533.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|388361234|gb|EIL25368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|388368621|gb|EIL32246.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|388377634|gb|EIL40429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|388379316|gb|EIL41986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|388383822|gb|EIL45570.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|388394242|gb|EIL55545.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|388395246|gb|EIL56470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|388398327|gb|EIL59247.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|388406306|gb|EIL66712.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|388415406|gb|EIL75336.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|388420456|gb|EIL80148.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|390650910|gb|EIN29283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|390652871|gb|EIN31043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|390653352|gb|EIN31499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|390688660|gb|EIN63692.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|390708495|gb|EIN81715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|390710386|gb|EIN83408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|390720217|gb|EIN92929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|390733902|gb|EIO05463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|390733923|gb|EIO05482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|390737013|gb|EIO08328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|390752231|gb|EIO22077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|390752793|gb|EIO22599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|390778620|gb|EIO46377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|390784219|gb|EIO51792.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|390785934|gb|EIO53476.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|390794961|gb|EIO62246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|390801804|gb|EIO68855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|390810296|gb|EIO77057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|390812006|gb|EIO78691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|390819575|gb|EIO85908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|390823101|gb|EIO89173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|390837270|gb|EIP01701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|390840057|gb|EIP04116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|390842294|gb|EIP06148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|390855692|gb|EIP18374.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|390860042|gb|EIP22369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|390860502|gb|EIP22816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|390871773|gb|EIP33153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|390876375|gb|EIP37361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|390886159|gb|EIP46297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|390888188|gb|EIP48084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|390895026|gb|EIP54516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|390904066|gb|EIP63082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|390910613|gb|EIP69344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|390911897|gb|EIP70578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|390915105|gb|EIP73623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|391254798|gb|EIQ13957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|391256934|gb|EIQ16056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|391259221|gb|EIQ18296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|391268295|gb|EIQ27223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|391273843|gb|EIQ32661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|391288799|gb|EIQ47298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|391289061|gb|EIQ47557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|391296907|gb|EIQ54983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|391306878|gb|EIQ64626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|391309584|gb|EIQ67252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|391315322|gb|EIQ72855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|394390767|gb|EJE67727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|394394615|gb|EJE71178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|394399939|gb|EJE75900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|394405883|gb|EJE80980.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|394409054|gb|EJE83641.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|394411993|gb|EJE86173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|394431102|gb|EJF03345.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|394433365|gb|EJF05397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|397901491|gb|EJL17837.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|397903014|gb|EJL19321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|404292798|gb|EJZ49589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|404341888|gb|EJZ68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|406779098|gb|AFS58522.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055680|gb|AFS75731.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063922|gb|AFS84969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072549|gb|EKH06870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|408076058|gb|EKH10287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|408086071|gb|EKH19613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|408090667|gb|EKH23938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|408095712|gb|EKH28677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|408110228|gb|EKH42055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|408130322|gb|EKH60470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|408141708|gb|EKH71163.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|408150524|gb|EKH79106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|408153279|gb|EKH81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|408158626|gb|EKH86743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|408167182|gb|EKH94709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|408172668|gb|EKH99731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|408174740|gb|EKI01704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|408187056|gb|EKI13037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|408192241|gb|EKI17818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|408192338|gb|EKI17914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|408206225|gb|EKI31037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|408232196|gb|EKI55447.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|408233175|gb|EKI56310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|408239305|gb|EKI62058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|408249177|gb|EKI71129.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|408259573|gb|EKI80732.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|408268456|gb|EKI88812.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|408270231|gb|EKI90440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|408285341|gb|EKJ04371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|408288146|gb|EKJ06984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|408300617|gb|EKJ18302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|408301169|gb|EKJ18823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|408310092|gb|EKJ27176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|408318281|gb|EKJ34496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|408318837|gb|EKJ35039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|408331655|gb|EKJ46799.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|408337258|gb|EKJ51994.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|408338660|gb|EKJ53306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|408347912|gb|EKJ62055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|408350623|gb|EKJ64471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|408353294|gb|EKJ66816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|408457121|gb|EKJ80922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|408559047|gb|EKK35390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|408559378|gb|EKK35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|408585478|gb|EKK60345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|408590504|gb|EKK64979.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|408592319|gb|EKK66711.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|408604556|gb|EKK78130.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|408605962|gb|EKK79442.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|408617328|gb|EKK90450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|412961686|emb|CCK45593.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|412968301|emb|CCJ42918.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|421934149|gb|EKT91926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|421945317|gb|EKU02534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421946795|gb|EKU03909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|427214751|gb|EKV84023.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|427217281|gb|EKV86350.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|427234000|gb|EKW01709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|427234232|gb|EKW01931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|427236318|gb|EKW03899.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|427251581|gb|EKW18144.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|427253203|gb|EKW19646.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|427254457|gb|EKW20818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|427270575|gb|EKW35453.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|427271063|gb|EKW35912.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|427276296|gb|EKW40870.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|427286631|gb|EKW50469.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|427293895|gb|EKW57115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|427304913|gb|EKW67533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|427306553|gb|EKW69072.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|427310961|gb|EKW73181.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|427321629|gb|EKW83308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|427322536|gb|EKW84167.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|427334773|gb|EKW95841.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|427336797|gb|EKW97746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429260204|gb|EKY43797.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429261864|gb|EKY45256.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429351546|gb|EKY88266.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429352249|gb|EKY88965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353007|gb|EKY89716.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429366920|gb|EKZ03521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429367831|gb|EKZ04423.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429370326|gb|EKZ06892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429382713|gb|EKZ19177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429384946|gb|EKZ21400.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429385469|gb|EKZ21922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429397162|gb|EKZ33509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429399390|gb|EKZ35711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429399698|gb|EKZ36018.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410452|gb|EKZ46674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429412352|gb|EKZ48549.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429419337|gb|EKZ55475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429427896|gb|EKZ63976.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434740|gb|EKZ70764.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429435564|gb|EKZ71582.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429440105|gb|EKZ76084.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429444705|gb|EKZ80650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429451010|gb|EKZ86902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456502|gb|EKZ92347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430879591|gb|ELC02922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|430880733|gb|ELC04008.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|430888882|gb|ELC11553.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|430891423|gb|ELC13959.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|430900424|gb|ELC22443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|430901424|gb|ELC23392.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|430909943|gb|ELC31301.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|430912044|gb|ELC33295.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|430918693|gb|ELC39694.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|430922722|gb|ELC43469.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|430929269|gb|ELC49780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|430932803|gb|ELC53222.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|430938442|gb|ELC58683.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|430943765|gb|ELC63871.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|430947421|gb|ELC67119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|430947712|gb|ELC67409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|430956175|gb|ELC74851.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|430966661|gb|ELC84024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|430969560|gb|ELC86664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|430974577|gb|ELC91500.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|430976249|gb|ELC93124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|430985237|gb|ELD01843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|430992492|gb|ELD08863.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|430997200|gb|ELD13467.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|430999937|gb|ELD16011.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|431010397|gb|ELD24745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|431010815|gb|ELD25159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|431013139|gb|ELD26873.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|431018567|gb|ELD31998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|431027822|gb|ELD40867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|431032275|gb|ELD44986.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|431042147|gb|ELD52639.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|431044965|gb|ELD55220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|431045628|gb|ELD55858.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|431054710|gb|ELD64279.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|431057196|gb|ELD66666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|431064545|gb|ELD73412.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|431078330|gb|ELD85388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|431085330|gb|ELD91443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|431087077|gb|ELD93082.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|431094507|gb|ELE00139.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|431099580|gb|ELE04600.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|431103109|gb|ELE07779.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|431108816|gb|ELE12787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|431110770|gb|ELE14687.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|431119564|gb|ELE22563.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|431124016|gb|ELE26670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|431133000|gb|ELE34998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|431133989|gb|ELE35955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|431140544|gb|ELE42310.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|431144001|gb|ELE45709.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|431151484|gb|ELE52499.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|431158151|gb|ELE58772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|431162899|gb|ELE63339.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|431165156|gb|ELE65514.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|431174033|gb|ELE74094.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|431174526|gb|ELE74571.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|431184353|gb|ELE84111.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|431185131|gb|ELE84861.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|431193336|gb|ELE92672.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|431195632|gb|ELE94601.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|431203796|gb|ELF02386.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|431204693|gb|ELF03251.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|431207361|gb|ELF05618.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|431213759|gb|ELF11615.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|431225052|gb|ELF22261.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|431225241|gb|ELF22446.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|431230815|gb|ELF26585.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|431237363|gb|ELF32363.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|431246948|gb|ELF41191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|431247140|gb|ELF41382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|431252989|gb|ELF46503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|431259673|gb|ELF52036.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|431267053|gb|ELF58586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|431268362|gb|ELF59836.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|431276654|gb|ELF67674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|431278566|gb|ELF69556.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|431286362|gb|ELF77188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|431286851|gb|ELF77671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|431295828|gb|ELF85560.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|431300631|gb|ELF90182.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|431305615|gb|ELF93936.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|431312008|gb|ELG00156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|431313380|gb|ELG01353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|431319278|gb|ELG06962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|431320738|gb|ELG08368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|431330863|gb|ELG18127.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|431332057|gb|ELG19300.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|431342016|gb|ELG29012.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|431342482|gb|ELG29461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|431345873|gb|ELG32787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|431351309|gb|ELG38099.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|431357441|gb|ELG44108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|431357851|gb|ELG44517.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|431368952|gb|ELG55183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|431370758|gb|ELG56551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|431375269|gb|ELG60613.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|431380187|gb|ELG65087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|431388655|gb|ELG72378.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|431391889|gb|ELG75493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|431397252|gb|ELG80708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|431402564|gb|ELG85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|431405200|gb|ELG88443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|431408148|gb|ELG91340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|431413553|gb|ELG96318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|431419991|gb|ELH02325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|431425505|gb|ELH07575.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|431430034|gb|ELH11868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|431437415|gb|ELH18925.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|431447198|gb|ELH27940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|431447442|gb|ELH28174.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|431449533|gb|ELH30106.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|431454778|gb|ELH35136.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|431456807|gb|ELH37150.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|431463011|gb|ELH43205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|431470700|gb|ELH50597.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|431475909|gb|ELH55713.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|431478716|gb|ELH58461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|431482263|gb|ELH61966.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|431485751|gb|ELH65408.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|431496562|gb|ELH76145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|431498787|gb|ELH77972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|431506266|gb|ELH84864.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|431509566|gb|ELH87815.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|431514220|gb|ELH92062.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|431517284|gb|ELH94806.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|431519383|gb|ELH96835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|431535946|gb|ELI12281.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|431537563|gb|ELI13680.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|431541069|gb|ELI16519.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|431545989|gb|ELI20632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|431555549|gb|ELI29389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|431560180|gb|ELI33701.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|431560390|gb|ELI33904.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|431572897|gb|ELI45721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|431574218|gb|ELI47000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|431575871|gb|ELI48594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|431588358|gb|ELI59643.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|431591180|gb|ELI62180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|431593673|gb|ELI63965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|431601212|gb|ELI70729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|431606029|gb|ELI75413.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|431610203|gb|ELI79504.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|431615213|gb|ELI84343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|431619874|gb|ELI88771.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|431622851|gb|ELI91536.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|431631766|gb|ELJ00072.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|431634596|gb|ELJ02837.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|431636888|gb|ELJ05007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|431649335|gb|ELJ16693.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|431650108|gb|ELJ17445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|431651635|gb|ELJ18874.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|431663400|gb|ELJ30162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|431665035|gb|ELJ31762.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|431666687|gb|ELJ33314.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|431676787|gb|ELJ42870.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|431678637|gb|ELJ44633.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|431682066|gb|ELJ47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|431692289|gb|ELJ57727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|431694181|gb|ELJ59566.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|431696252|gb|ELJ61439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|431709788|gb|ELJ74236.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|431710588|gb|ELJ74962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|431711866|gb|ELJ76173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|431721843|gb|ELJ85835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|431725793|gb|ELJ89632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|431726374|gb|ELJ90184.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|431733143|gb|ELJ96584.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|431736022|gb|ELJ99364.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|441609774|emb|CCP94813.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441655107|emb|CCQ00170.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441712013|emb|CCQ07478.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443420972|gb|AGC85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444542453|gb|ELV21811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444550931|gb|ELV28949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444551798|gb|ELV29674.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444565090|gb|ELV41991.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444567160|gb|ELV43930.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444571479|gb|ELV47961.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444582364|gb|ELV58158.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444585162|gb|ELV60742.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444586123|gb|ELV61644.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444600469|gb|ELV75305.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444608386|gb|ELV82919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444614923|gb|ELV89148.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|444615589|gb|ELV89793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444623578|gb|ELV97498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|444632670|gb|ELW06225.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|444632891|gb|ELW06440.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|444637804|gb|ELW11169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|444647984|gb|ELW20940.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|444650090|gb|ELW22942.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|444654180|gb|ELW26874.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|444663161|gb|ELW35406.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|444667434|gb|ELW39472.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|444672857|gb|ELW44543.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|444674580|gb|ELW46110.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|449322675|gb|EMD12658.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|449324923|gb|EMD14843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|449324967|gb|EMD14886.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
Length = 207
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D+ +A+ I++QLL LDA+D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 140/201 (69%), Gaps = 7/201 (3%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERI+FLG+ ID+ VA +++QL+ L+++DP +DI +++
Sbjct: 30 PMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLESEDPERDIFIYI 89
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + IYD +Q +R D++TV +GM+AS + +L GTKGKR ++P++R+MIHQ
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQ 149
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P GGA GQ D+ IQAREI + +++ TGR +Q+++D +RDR+M+ EA+EYG
Sbjct: 150 PSGGAQGQETDIIIQAREIEKIRKLLEELLAKHTGRDVQQIREDSERDRWMNAAEALEYG 209
Query: 246 IIDGVIDRDSIIPLVPVPEKV 266
IID V ++ P PEKV
Sbjct: 210 IIDQVFEKR------PAPEKV 224
>gi|419389854|ref|ZP_13930693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|419395026|ref|ZP_13935811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|419400377|ref|ZP_13941111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|419405549|ref|ZP_13946253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|419411043|ref|ZP_13951716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
gi|378244656|gb|EHY04598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|378251878|gb|EHY11774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|378252208|gb|EHY12102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|378257938|gb|EHY17774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|378261234|gb|EHY21029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
Length = 207
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|300900508|ref|ZP_07118675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300924164|ref|ZP_07140156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300937054|ref|ZP_07151920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300958005|ref|ZP_07170169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300988008|ref|ZP_07178488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300997374|ref|ZP_07181714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|301022569|ref|ZP_07186441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|301049644|ref|ZP_07196593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|301301588|ref|ZP_07207723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301647363|ref|ZP_07247175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|309787029|ref|ZP_07681641.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|312964538|ref|ZP_07778794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|312970533|ref|ZP_07784714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|386612632|ref|YP_006132298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNK88]
gi|414574650|ref|ZP_11431859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3233-85]
gi|415777142|ref|ZP_11488394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|415790316|ref|ZP_11494958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|415801142|ref|ZP_11499543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|415814597|ref|ZP_11506195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|415821038|ref|ZP_11510052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1180]
gi|415828317|ref|ZP_11514914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1357]
gi|415836283|ref|ZP_11518695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|415852351|ref|ZP_11528727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|415859379|ref|ZP_11533654.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|415862715|ref|ZP_11536155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|415873838|ref|ZP_11541011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 79-10]
gi|416895867|ref|ZP_11925751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|417579661|ref|ZP_12230483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_B2F1]
gi|417585232|ref|ZP_12236012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_C165-02]
gi|417590120|ref|ZP_12240840.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2534-86]
gi|417595362|ref|ZP_12246032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3030-1]
gi|417600719|ref|ZP_12251304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_94C]
gi|417606429|ref|ZP_12256958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_DG131-3]
gi|417611470|ref|ZP_12261944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_EH250]
gi|417616826|ref|ZP_12267260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli G58-1]
gi|417621706|ref|ZP_12272035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_H.1.8]
gi|417627380|ref|ZP_12277627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_MHI813]
gi|417632922|ref|ZP_12283143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_S1191]
gi|417637737|ref|ZP_12287912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TX1999]
gi|417665523|ref|ZP_12315090.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_O31]
gi|417674312|ref|ZP_12323745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|417680634|ref|ZP_12330019.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
gi|417688200|ref|ZP_12337446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|417700589|ref|ZP_12349729.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-218]
gi|417705975|ref|ZP_12355040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri VA-6]
gi|417710994|ref|ZP_12360001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-272]
gi|417715955|ref|ZP_12364888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-227]
gi|417721425|ref|ZP_12370271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-304]
gi|417726776|ref|ZP_12375520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-671]
gi|417731925|ref|ZP_12380596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2747-71]
gi|417737258|ref|ZP_12385864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 4343-70]
gi|417741876|ref|ZP_12390428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2930-71]
gi|418042554|ref|ZP_12680747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W26]
gi|418301288|ref|ZP_12913082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNF18]
gi|418959268|ref|ZP_13511167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli J53]
gi|418995654|ref|ZP_13543268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1A]
gi|419049039|ref|ZP_13595958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3B]
gi|419090429|ref|ZP_13635749.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4C]
gi|419146621|ref|ZP_13691317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6B]
gi|419348518|ref|ZP_13889871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13B]
gi|419805361|ref|ZP_14330499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli AI27]
gi|420273503|ref|ZP_14775836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA40]
gi|420345496|ref|ZP_14846928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 965-58]
gi|422355330|ref|ZP_16436046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|422356283|ref|ZP_16436972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|422363028|ref|ZP_16443576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|422368704|ref|ZP_16449109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|422378071|ref|ZP_16458294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|422378678|ref|ZP_16458885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|424094467|ref|ZP_17830242.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1985]
gi|424100869|ref|ZP_17836048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1990]
gi|424107682|ref|ZP_17842276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93-001]
gi|424119733|ref|ZP_17853463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA5]
gi|424125993|ref|ZP_17859211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA9]
gi|424138622|ref|ZP_17870934.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA14]
gi|424453616|ref|ZP_17905171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA33]
gi|424466383|ref|ZP_17916591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA41]
gi|424573298|ref|ZP_18013737.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1845]
gi|424579253|ref|ZP_18019202.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1863]
gi|424817252|ref|ZP_18242403.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|425107864|ref|ZP_18510132.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 6.0172]
gi|425113766|ref|ZP_18515604.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0566]
gi|425118532|ref|ZP_18520267.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0569]
gi|425148284|ref|ZP_18548195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.0221]
gi|425172154|ref|ZP_18570568.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA504]
gi|425184183|ref|ZP_18581822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1997]
gi|425190934|ref|ZP_18588075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE1487]
gi|425203924|ref|ZP_18600068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK2001]
gi|425271133|ref|ZP_18662647.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW15901]
gi|425276312|ref|ZP_18667656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ARS4.2123]
gi|425286995|ref|ZP_18677930.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3006]
gi|425298636|ref|ZP_18688686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 07798]
gi|425321272|ref|ZP_18709959.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1737]
gi|425345948|ref|ZP_18732764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1849]
gi|428944919|ref|ZP_19017578.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1467]
gi|429024267|ref|ZP_19090687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0427]
gi|429076828|ref|ZP_19140048.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0713]
gi|300298581|gb|EFJ54966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|300304193|gb|EFJ58713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|300315272|gb|EFJ65056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300355989|gb|EFJ71859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300397450|gb|EFJ80988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|300407560|gb|EFJ91098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300419617|gb|EFK02928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300457885|gb|EFK21378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300843085|gb|EFK70845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301074508|gb|EFK89314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|308924607|gb|EFP70102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|310337182|gb|EFQ02320.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|312290772|gb|EFR18649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|313646936|gb|EFS11393.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|315256265|gb|EFU36233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|315289845|gb|EFU49235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|315294229|gb|EFU53580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|315299561|gb|EFU58809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|315616622|gb|EFU97239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|323153474|gb|EFZ39728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|323160452|gb|EFZ46400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|323164238|gb|EFZ50045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|323170523|gb|EFZ56173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|323178294|gb|EFZ63872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1180]
gi|323184732|gb|EFZ70103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1357]
gi|323191357|gb|EFZ76620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|324010068|gb|EGB79287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|324010651|gb|EGB79870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|324016702|gb|EGB85921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|325498272|gb|EGC96131.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|327254765|gb|EGE66381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|332085596|gb|EGI90760.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|332094593|gb|EGI99639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|332098592|gb|EGJ03558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
gi|332341801|gb|AEE55135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNK88]
gi|332760728|gb|EGJ91016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 4343-70]
gi|332761448|gb|EGJ91730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2747-71]
gi|332763735|gb|EGJ93973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-671]
gi|332768358|gb|EGJ98542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2930-71]
gi|333007966|gb|EGK27442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-218]
gi|333008123|gb|EGK27598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri VA-6]
gi|333010898|gb|EGK30324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-272]
gi|333020699|gb|EGK39959.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-227]
gi|333021875|gb|EGK41123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-304]
gi|339413386|gb|AEJ55058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNF18]
gi|342930642|gb|EGU99364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 79-10]
gi|345341457|gb|EGW73862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_C165-02]
gi|345344081|gb|EGW76457.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_B2F1]
gi|345345293|gb|EGW77639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2534-86]
gi|345354064|gb|EGW86291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_94C]
gi|345361730|gb|EGW93888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3030-1]
gi|345365643|gb|EGW97750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_DG131-3]
gi|345365955|gb|EGW98053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_EH250]
gi|345377684|gb|EGX09615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_MHI813]
gi|345381198|gb|EGX13083.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli G58-1]
gi|345386281|gb|EGX16116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_H.1.8]
gi|345391232|gb|EGX21026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_S1191]
gi|345395481|gb|EGX25225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TX1999]
gi|377849044|gb|EHU14020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1A]
gi|377902535|gb|EHU66839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3B]
gi|377950620|gb|EHV14247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4C]
gi|378001549|gb|EHV64608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6B]
gi|378204180|gb|EHX64596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13B]
gi|383474513|gb|EID66499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W26]
gi|384377970|gb|EIE35862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli J53]
gi|384471620|gb|EIE55693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli AI27]
gi|390669796|gb|EIN46389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93-001]
gi|390673007|gb|EIN49260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1990]
gi|390674047|gb|EIN50254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1985]
gi|390692170|gb|EIN66868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA9]
gi|390693116|gb|EIN67756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA5]
gi|390713047|gb|EIN85990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA14]
gi|390755179|gb|EIO24727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA33]
gi|390762421|gb|EIO31679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA40]
gi|390776243|gb|EIO44194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA41]
gi|390925020|gb|EIP82756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1863]
gi|390926190|gb|EIP83784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1845]
gi|391276380|gb|EIQ35152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 965-58]
gi|391289278|gb|EIQ47773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3233-85]
gi|397786920|gb|EJK97751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_O31]
gi|408102855|gb|EKH35244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA504]
gi|408116882|gb|EKH48149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1997]
gi|408122383|gb|EKH53245.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE1487]
gi|408132502|gb|EKH62478.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK2001]
gi|408198909|gb|EKI24120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW15901]
gi|408207207|gb|EKI31961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ARS4.2123]
gi|408218929|gb|EKI43111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3006]
gi|408221639|gb|EKI45572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 07798]
gi|408253459|gb|EKI75053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1737]
gi|408278942|gb|EKI98609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1849]
gi|408560349|gb|EKK36613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 6.0172]
gi|408573157|gb|EKK49016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0566]
gi|408573670|gb|EKK49500.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0569]
gi|408611153|gb|EKK84515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.0221]
gi|427217767|gb|EKV86819.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1467]
gi|427292270|gb|EKW55624.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0427]
gi|427334470|gb|EKW95539.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0713]
Length = 194
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q
Sbjct: 24 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI AREI
Sbjct: 84 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 144 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 190
>gi|83718816|ref|YP_442643.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|167581577|ref|ZP_02374451.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis TXDOH]
gi|167619693|ref|ZP_02388324.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis Bt4]
gi|167836265|ref|ZP_02463148.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|110816456|sp|Q2SWQ6.1|CLPP_BURTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83652641|gb|ABC36704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
thailandensis E264]
Length = 207
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 133/189 (70%), Gaps = 1/189 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG + D LLKERIVF+ ++D A+ +++QLL L++++P KDI
Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDI 73
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN RV
Sbjct: 74 SLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARV 133
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++ +D DRD +MS +A
Sbjct: 134 MIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDA 193
Query: 242 VEYGIIDGV 250
YG+ID V
Sbjct: 194 KAYGLIDHV 202
>gi|399910853|ref|ZP_10779167.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. KM-1]
Length = 206
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D +A+ I++QLL L++++P KDI L++
Sbjct: 15 PMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHLYI 74
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG+++A MAIYD +Q ++ DVSTV +G +AS +L+L GG GKR+++P++R+MIHQ
Sbjct: 75 NSPGGAVTAGMAIYDTMQFIKPDVSTVCIGQAASMGALLLAGGASGKRYSLPHSRMMIHQ 134
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ +D RI++ TG+ E + +D DRD +MS +A EYG
Sbjct: 135 PLGGYQGQAADIEIHTREILGIRDKLNRILAHHTGQDIETIARDTDRDNFMSGTQATEYG 194
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 195 LIDAVLDK 202
>gi|46198558|ref|YP_004225.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB27]
gi|46196180|gb|AAS80598.1| ATP-dependent clp protease proteolytic subunit [Thermus
thermophilus HB27]
Length = 212
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 127/171 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ID VA+ +++QLL LDAQ+P ++I+L++NSPGG + A +AIYD +Q
Sbjct: 41 LLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIYDTMQF 100
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VRA VST+ +GM+AS A++IL G KG+R+A+P+ +VMIHQP GG G D+ IQA+EI
Sbjct: 101 VRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEI 160
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+ K I++ TG+ E+V+KD DRD Y+S EA+EYG+ID V+ R+
Sbjct: 161 LKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVVTREE 211
>gi|237707568|ref|ZP_04538049.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332281588|ref|ZP_08394001.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
gi|226898778|gb|EEH85037.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332103940|gb|EGJ07286.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
Length = 227
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 52 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 111
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 112 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 171
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 172 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 223
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252.1|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 127/172 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+ I
Sbjct: 144 LKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVLTHRDI 195
>gi|449469024|ref|XP_004152221.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like [Cucumis sativus]
Length = 306
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 118 LFQYRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMKH 177
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 178 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGTQTDIDIQANEM 237
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR--DSIIPLVPV 262
+H+K N +S TG+S E++ +D DRD +MSP EA++YG+IDGVI ++ PL P
Sbjct: 238 LHHKANLNGYLSYHTGQSLEKINEDTDRDFFMSPKEAIDYGLIDGVIMNPLKALQPLAPT 297
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 132/187 (70%), Gaps = 5/187 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG A D LL++RIV LG IDD VA+ I++QLL L+AQDP KDI++++N
Sbjct: 21 QTP----RGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYIN 76
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS++A +AIYD +Q ++ DV+T+ +G +AS +++L GTKGKRFA+PN R+MIHQP
Sbjct: 77 SPGGSVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGTKGKRFALPNARIMIHQP 136
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG GQ D+ I A EI K I++ TG++ Q++KD+DRD +MS EA YG+
Sbjct: 137 LGGVQGQATDILIHAEEIKRIKHILNTILANATGKNLRQIEKDVDRDYFMSAEEAKNYGL 196
Query: 247 IDGVIDR 253
ID VI +
Sbjct: 197 IDKVITK 203
>gi|186681335|ref|YP_001864531.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186463787|gb|ACC79588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 232
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 130/177 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+FLG IDD VA++I++QLL LD++D KDI+++VNSPGGS+ A MAIY
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDSEDSEKDIQMYVNSPGGSVYAGMAIY 104
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L G GKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 105 DTIQQIRPDVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQGQAIDIEI 164
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
QAREI++ K +++S TG+ E+++ D +RD +MS EA YG+ID VI R ++
Sbjct: 165 QAREILYVKAKLNQLMSHHTGQPLERIEADTERDFFMSAEEAKNYGLIDQVISRQNL 221
>gi|307544936|ref|YP_003897415.1| ATP-dependent Clp protease proteolytic subunit [Halomonas elongata
DSM 2581]
gi|307216960|emb|CBV42230.1| ATP-dependent Clp protease proteolytic subunit [Halomonas elongata
DSM 2581]
Length = 206
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG + D LLKER++FL ++D+ A+ +++QLL L++++P KDI L++
Sbjct: 15 PMVVEQSARGERSYDIYSRLLKERVIFLVGPVEDYTANLLVAQLLFLESENPDKDIHLYI 74
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVSTV +G +AS +L+L GG GKR+ +PN+R+MIHQ
Sbjct: 75 NSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLAGGAHGKRYCLPNSRMMIHQ 134
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ ++ +I++ TG+ FE + KD DRD +M+ +A EYG
Sbjct: 135 PLGGYQGQASDIEIHTREILGIRERLNQILAHHTGQKFETIAKDTDRDNFMNGAQAAEYG 194
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 195 LIDAVLDK 202
>gi|417230125|ref|ZP_12031711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
gi|386206615|gb|EII11121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
Length = 207
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAIHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|373486607|ref|ZP_09577280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
gi|372011468|gb|EHP12063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
Length = 198
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 126/176 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+ I+FLG IDD VA+AI++Q+L L+++DP KDI++++NSPGGS++A +AIY
Sbjct: 23 DIYSRLLKDNIIFLGTAIDDSVANAIVAQMLFLESEDPDKDIQIYINSPGGSVTAGLAIY 82
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ D+ T +G AS + +L GTKGKRFA+PN R+MIHQP GGA GQ ++EI
Sbjct: 83 DTMQFVKNDIVTYCIGQCASMGAHLLAAGTKGKRFALPNARIMIHQPSGGAQGQATEIEI 142
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+EI KDN S TG++ ++V KD+DRD +MS EA+EYGI+D V+ S
Sbjct: 143 TYKEIQRLKDNLAGTFSKHTGQTLKKVMKDMDRDYFMSAEEAMEYGIVDKVLTERS 198
>gi|423082887|ref|ZP_17071470.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423086337|ref|ZP_17074746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357547206|gb|EHJ29100.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357547324|gb|EHJ29214.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
Length = 194
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 127/170 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+F+G I+D +A +++QLL L+++DP DI +++NSPGGS +A AIYD +
Sbjct: 24 LLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSTTAGFAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DVST+ +GM+AS ++ +L GGT+GKR A+PN+ +MIHQPMGGA GQ DV+I I
Sbjct: 84 VRCDVSTICIGMAASMSAFLLAGGTRGKRCALPNSEIMIHQPMGGAKGQATDVKIAVDNI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+ K+ RI+S TG+S E +++D DRD +M+ IEA EYG+ID +++R+
Sbjct: 144 LKIKEQLDRILSENTGKSIEDIRRDTDRDNFMTAIEAKEYGLIDYIMNRN 193
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0.1|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3.1|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+
Sbjct: 144 LKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
>gi|440229732|ref|YP_007343525.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens FGI94]
gi|440051437|gb|AGB81340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens FGI94]
Length = 207
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPDKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S S +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI++ K +++ TG+ EQ+++D +RDR+M+ E+VEYG++DG++ S
Sbjct: 152 HAREILNVKARMNELMAKHTGQPLEQIERDTERDRFMTAEESVEYGLVDGILTHRS 207
>gi|377820658|ref|YP_004977029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. YI23]
gi|357935493|gb|AET89052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. YI23]
Length = 217
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LLKER+VFL ++D A+ +++QLL L++++P KDI
Sbjct: 24 LGLVPMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESENPDKDI 83
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR A+PN RV
Sbjct: 84 SLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRVALPNARV 143
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ K+ +++S TG+ E++ +D DRD +MS +A
Sbjct: 144 MIHQPLGGARGQASDIEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFMSGDDA 203
Query: 242 VEYGIIDGVIDR 253
YGI+D V+ +
Sbjct: 204 QAYGIVDQVLHK 215
>gi|88810607|ref|ZP_01125864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrococcus
mobilis Nb-231]
gi|88792237|gb|EAR23347.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrococcus
mobilis Nb-231]
Length = 214
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 140/206 (67%), Gaps = 5/206 (2%)
Query: 57 RQHDVPLSSA--PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
R+H+ P+++ P RG A D LLKER++FL ++D A+ +I+QLL L+
Sbjct: 7 RRHE-PMATGLVPMVVEQTARGERAYDIYSRLLKERVIFLVGPVEDHQANLLIAQLLFLE 65
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
+++P KDI L++NSPGG +SA +AIYD +Q V+ DVSTV LG +AS +L+L GG GKR
Sbjct: 66 SENPDKDIHLYINSPGGVVSAGLAIYDTMQFVKPDVSTVCLGQAASMGALLLTGGAAGKR 125
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
+ +PN+R+MIHQP+GG GQ DVEI AREI+ ++ +I++ TG+ E +Q+D +RD
Sbjct: 126 YCLPNSRIMIHQPLGGFQGQATDVEIHAREILAMRERLNQILAQHTGQDIETIQQDTERD 185
Query: 234 RYMSPIEAVEYGIIDGVI-DRDSIIP 258
+M P A YGI+DGV+ DR + P
Sbjct: 186 NFMGPEAAQSYGIVDGVLRDRGKLAP 211
>gi|167562414|ref|ZP_02355330.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis EO147]
gi|167569597|ref|ZP_02362471.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis C6786]
Length = 207
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 133/189 (70%), Gaps = 1/189 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG + D LLKERIVF+ ++D A+ +++QLL L++++P KDI
Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDI 73
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN RV
Sbjct: 74 SLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARV 133
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++ +D DRD +MS +A
Sbjct: 134 MIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAQHTGQDVERIARDTDRDNFMSSEDA 193
Query: 242 VEYGIIDGV 250
YG+ID V
Sbjct: 194 KAYGLIDHV 202
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 18 LLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 77
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 78 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEI 137
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+
Sbjct: 138 LKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 184
>gi|150009000|ref|YP_001303743.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
distasonis ATCC 8503]
gi|255014831|ref|ZP_05286957.1| ATP-dependent Clp protease, proteolytic subunit [Bacteroides sp.
2_1_7]
gi|256840999|ref|ZP_05546506.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Parabacteroides sp. D13]
gi|262383890|ref|ZP_06077026.1| Clp protease [Bacteroides sp. 2_1_33B]
gi|298375768|ref|ZP_06985724.1| Clp protease [Bacteroides sp. 3_1_19]
gi|301312050|ref|ZP_07217972.1| Clp protease [Bacteroides sp. 20_3]
gi|410102760|ref|ZP_11297685.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides sp.
D25]
gi|423330255|ref|ZP_17308039.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
distasonis CL03T12C09]
gi|423339395|ref|ZP_17317136.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
distasonis CL09T03C24]
gi|149937424|gb|ABR44121.1| ATP-dependent Clp protease, proteolytic subunit [Parabacteroides
distasonis ATCC 8503]
gi|256736842|gb|EEU50169.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Parabacteroides sp. D13]
gi|262294788|gb|EEY82720.1| Clp protease [Bacteroides sp. 2_1_33B]
gi|298266805|gb|EFI08462.1| Clp protease [Bacteroides sp. 3_1_19]
gi|300830152|gb|EFK60800.1| Clp protease [Bacteroides sp. 20_3]
gi|409230776|gb|EKN23637.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
distasonis CL09T03C24]
gi|409231871|gb|EKN24719.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
distasonis CL03T12C09]
gi|409237887|gb|EKN30682.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides sp.
D25]
Length = 220
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 141/215 (65%), Gaps = 4/215 (1%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPAT----AMRGAEADAMGLLLKERIVFLGNNID 98
R+ +TK L + + +SS+ +P + A+ D L+ +RI+FLG +D
Sbjct: 5 RKYATKHLGMSGTALDSYMNISSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVD 64
Query: 99 DFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSA 158
D+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + +DVST+ GM+A
Sbjct: 65 DYTANVIQAQLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFISSDVSTICTGMAA 124
Query: 159 STASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGF 218
S AS++L GTKGKRF + ++RVMIHQP+GG GQ D+EI AREI+ K IIS
Sbjct: 125 SMASVLLVAGTKGKRFGLKHSRVMIHQPLGGVQGQASDIEITAREILKVKKELYTIISDH 184
Query: 219 TGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+GR +E++++D DRD +M+ EA +YG+ID V+ R
Sbjct: 185 SGRPYEEIERDGDRDFWMTAEEAKKYGMIDDVLTR 219
>gi|254179427|ref|ZP_04886026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
gi|254200063|ref|ZP_04906429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|147749659|gb|EDK56733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|184209967|gb|EDU07010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
Length = 211
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TLA Q + L P T+ RG + D LLKERIVF+ ++D A+ +++
Sbjct: 4 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 63
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L
Sbjct: 64 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 123
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ +D +++ TG+ E++
Sbjct: 124 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIA 183
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG+ID V
Sbjct: 184 RDTDRDNFMSSEDAKAYGLIDHV 206
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|417001079|ref|ZP_11940993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|333975562|gb|EGL76441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
Length = 197
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+I+Q+L L+A+DP KDI L++NSPGG ++A MAIYD +Q
Sbjct: 23 LLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +++L GTKGKR+A+P+ R+MIHQP+GG GQ ++EI AREI
Sbjct: 83 IKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQPLGGVQGQASEIEIHAREI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ ++ I++ +G+ E V +D DRD +MS +AVEYG+ID V+ R+ +
Sbjct: 143 LRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVLTREPV 194
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
Length = 198
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG A D LL+ERIVFLG ++D +A+ I++QLL L+A DP KDI L++
Sbjct: 3 PTVIESSGRGERAFDIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLEADDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA M I+D + VR DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K + ++ TG+ E+++ D DRD +MS EA +YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKGKLNQHLADHTGQPLEKIEIDTDRDFFMSAAEAKDYG 182
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 183 LIDQVIER 190
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15.1|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 141/205 (68%), Gaps = 7/205 (3%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P T+ RG A D LL+ERI+FLG+ ID+ VA I++QL+ L+++DP +DI
Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIY 86
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
++VNSPGGS+SA + IYD +Q +R DVSTV +GM+AS + +L GTKGKR ++P++R+M
Sbjct: 87 IYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGTKGKRASLPHSRIM 146
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP GGA GQ D+ IQAREI + I++ TG+ +QV++D +RDR+M+ EA+
Sbjct: 147 IHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMNAQEAL 206
Query: 243 EYGIIDGVIDRDSIIPLVPVPEKVK 267
EYGIID + ++ P P+K K
Sbjct: 207 EYGIIDQIFEKR------PKPDKEK 225
>gi|375089682|ref|ZP_09736007.1| ATP-dependent Clp protease proteolytic subunit [Facklamia languida
CCUG 37842]
gi|374566529|gb|EHR37768.1| ATP-dependent Clp protease proteolytic subunit [Facklamia languida
CCUG 37842]
Length = 202
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIV L +DD +A+++I+QLL LDAQDP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIVMLSGPVDDNMANSVIAQLLFLDAQDPDKDIYLYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AI+D + ++ADV T+ +GM+AS AS++L GTKGKRFA+PN VMIHQP+GGA GQ
Sbjct: 73 AGLAIFDTMNFIKADVQTIVIGMAASMASVLLAAGTKGKRFALPNAEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++EI AR I+ ++ +I+S TG+ + + +D DRD +MS +A EYG++D V++
Sbjct: 133 ATEIEIAARHILKTRERLNQILSEATGQPLDVINRDTDRDNFMSADQAKEYGLVDEVME 191
>gi|395762551|ref|ZP_10443220.1| ATP-dependent Clp protease proteolytic subunit [Janthinobacterium
lividum PAMC 25724]
Length = 205
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++F+ ++D +A+ +++QLL L++++P K+I L++NSPGGS+SA MAIYD +Q
Sbjct: 35 LLKERLIFMVGPVNDQMANLVVAQLLFLESENPEKEISLYINSPGGSVSAGMAIYDTMQF 94
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ GM+AS + +L G KGKRF++PN+R+MIHQP GG+ G D+EIQAREI
Sbjct: 95 IKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGSQGMASDIEIQAREI 154
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ + I++ TG+S EQ+ KD DRDR+MS EAVEYG+ID V+
Sbjct: 155 LYLRTRLNGIMAERTGQSIEQIAKDTDRDRFMSADEAVEYGLIDKVL 201
>gi|401678822|ref|ZP_10810776.1| ClpP Protein [Enterobacter sp. SST3]
gi|400213918|gb|EJO44850.1| ClpP Protein [Enterobacter sp. SST3]
Length = 207
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D V+
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSASEAVEYGLVDSVL 203
>gi|223994545|ref|XP_002286956.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978271|gb|EED96597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 260
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 134/198 (67%), Gaps = 1/198 (0%)
Query: 67 PQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
P P + D + LLK+RI+ LG +++D VA+ +++QLL L +DP KDI L++N
Sbjct: 59 PTLPTVEGGSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYIN 118
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS+SA +AIYD +Q + DV TV GM+AS + +LG G GKR ++PN R+MIHQP
Sbjct: 119 SPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARIMIHQP 178
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GGA GQ D+EIQA+EI+ K + I+ + + E++++D DRD +M+P EA +YGI
Sbjct: 179 LGGAQGQAADIEIQAKEILFVKACLNKYIAEYCDQPVEKIEEDTDRDFFMTPYEAQDYGI 238
Query: 247 IDGVID-RDSIIPLVPVP 263
ID VI + S IPL +P
Sbjct: 239 IDEVIKTKTSHIPLPAMP 256
>gi|119510658|ref|ZP_01629787.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119464709|gb|EAW45617.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 210
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 129/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG IDD VA++I++QLL LDA+D KDI++++NSPGGS+ A MAIYD +Q
Sbjct: 28 LLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQIYINSPGGSVYAGMAIYDTMQQ 87
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L G+ GKR ++P++R+MIHQP+GGA GQ +D+EIQAREI
Sbjct: 88 IRPDVVTICFGLAASMGAFLLAAGSAGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREI 147
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
++ K +++ TG+ E+++ D +RD +MS EA YG+ID VI R +I
Sbjct: 148 LYVKAKLNQLLGHHTGQPLERLEADTERDFFMSAEEAKNYGLIDQVISRQNI 199
>gi|397618063|gb|EJK64740.1| hypothetical protein THAOC_14495 [Thalassiosira oceanica]
Length = 287
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 129/176 (73%)
Query: 76 GAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSAT 135
G++ D + LL++RI+ LG +DD +A+ +++QLL L +DPTKDI L++NSPGGS+SA
Sbjct: 97 GSQKDVISRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLYINSPGGSVSAG 156
Query: 136 MAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVL 195
MAIYD +Q V DVSTV GM+AS + +LG G GKR A+PN+R+MIHQP+GGA GQ
Sbjct: 157 MAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNSRIMIHQPLGGAQGQAA 216
Query: 196 DVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EIQA+EI+ ++ I+ + G+ ++++ D DRD +M+ EAV+YGIID +I
Sbjct: 217 DIEIQAKEILFIREVLNTYIAEYCGQPKDKIEADCDRDFFMTAEEAVDYGIIDEMI 272
>gi|389841946|ref|YP_006344030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cronobacter
sakazakii ES15]
gi|417791995|ref|ZP_12439407.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii E899]
gi|424798413|ref|ZP_18223955.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 696]
gi|429092459|ref|ZP_19155087.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 1210]
gi|429099391|ref|ZP_19161497.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 582]
gi|429102778|ref|ZP_19164752.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis 564]
gi|429107667|ref|ZP_19169536.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 681]
gi|429109245|ref|ZP_19171015.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 507]
gi|429114393|ref|ZP_19175311.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 701]
gi|449309236|ref|YP_007441592.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii SP291]
gi|333953883|gb|EGL71773.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii E899]
gi|387852422|gb|AFK00520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cronobacter
sakazakii ES15]
gi|423234134|emb|CCK05825.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 696]
gi|426285731|emb|CCJ87610.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 582]
gi|426289427|emb|CCJ90865.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis 564]
gi|426294390|emb|CCJ95649.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 681]
gi|426310402|emb|CCJ97128.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 507]
gi|426317522|emb|CCK01424.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 701]
gi|426742658|emb|CCJ81200.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 1210]
gi|449099269|gb|AGE87303.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii SP291]
Length = 207
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 203
>gi|395232657|ref|ZP_10410907.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
gi|394733059|gb|EJF32698.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
Length = 207
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K +++ TG+S EQ++KD +RDR++S EAVEYG++D ++
Sbjct: 152 HAKEILKVKARMNELMAEHTGKSLEQIEKDTERDRFLSASEAVEYGLVDSIL 203
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P + RG A D LLK+RI+FLG IDD VA+ +++Q+L L+++DP KDI
Sbjct: 1 MNYVPMVVEQSNRGERAYDIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A +AIYD +Q ++ DVST+ +G +AS +++L G KGKRFA+PN RV
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNARV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D++IQAREI ++ I TG++ E++ D +RD +M+ EA
Sbjct: 121 MIHQPLGGAQGQSTDIQIQAREIQRIRETINDIFVSSTGKTAEEINNDTERDNFMTAAEA 180
Query: 242 VEYGIIDGVIDR 253
YGI+D VI R
Sbjct: 181 KAYGIVDEVITR 192
>gi|118594831|ref|ZP_01552178.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
gi|118440609|gb|EAV47236.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
Length = 209
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG + D LLKER+VFL +DD A+ +++QLL L+A++P KDI
Sbjct: 13 LGYIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVDDMTANVVVAQLLFLEAENPDKDI 72
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ D+ST+ +G +AS +L+L G KRF++PN+RV
Sbjct: 73 SLYINSPGGSVTAGMAIYDTMQFIKPDISTLCIGQAASMGALLLTAGAAKKRFSLPNSRV 132
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EI A+EI++ K+ +I++ +G+S E+V KD DRD +MS +A
Sbjct: 133 MIHQPLGGFQGQASDIEIHAKEILYLKEKLNKIMAEHSGQSLEKVSKDTDRDNFMSAKDA 192
Query: 242 VEYGIIDGVIDRDS 255
+EYG+ID VI S
Sbjct: 193 MEYGLIDKVISSRS 206
>gi|399050842|ref|ZP_10740886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|433542108|ref|ZP_20498542.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|398051558|gb|EJL43880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|432186623|gb|ELK44090.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 193
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 124/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+ LG IDD VA+ +++QLL L A+DP KDI L++NSPGGS++A MAIY
Sbjct: 18 DIYSRLLKDRIILLGTEIDDEVANLVVAQLLFLQAEDPEKDISLYINSPGGSVTAGMAIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GG GQ D+ I
Sbjct: 78 DTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGVRGQAEDIRI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A I+ K +I+S TG+ +E+V+ D DRD +MS EA YG+ID +I+R
Sbjct: 138 HAEWILKTKRQLNQILSERTGQPYERVELDTDRDNFMSAEEAKAYGLIDTIIER 191
>gi|295094048|emb|CBK83139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coprococcus
sp. ART55/1]
Length = 193
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 123/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ ++D A +I+QLL L+++DP+KDI L++NSPGGS++A M IYD ++
Sbjct: 24 LLKDRIIFLGDEVNDATASLVIAQLLFLESEDPSKDISLYINSPGGSVTAGMGIYDTMRY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ GM+AS + +L GGTKGKR+A+PN+ +MIHQP+GG GQ ++EI AR I
Sbjct: 84 IKCDVSTICCGMAASMGAFLLAGGTKGKRYALPNSEIMIHQPLGGTQGQATEIEIAARHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ +++S TG+ + + D DRD +M+ EA YG+ID VI
Sbjct: 144 LKTKEKLNKMLSENTGKPLDVIAADTDRDNWMTAEEACAYGLIDSVI 190
>gi|409990518|ref|ZP_11273881.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938615|gb|EKN79916.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 198
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 129/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L +ERI+FL +DD +A+AI++ +L LD++DP+K I L++NSPGGS++A MAIYD +Q
Sbjct: 27 LFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPSKPIYLYINSPGGSVTAGMAIYDTMQY 86
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+++DV T+ +GM+AS + +L GTKGKR A+PN R+MIHQP+GG GQ D+EI+A+EI
Sbjct: 87 IKSDVVTICVGMAASMGAFLLAAGTKGKRLALPNARIMIHQPLGGTRGQATDIEIEAKEI 146
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ + +++ +G++ E+++KD DRD +MS EA EYG+ID VI+ S+
Sbjct: 147 LRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSAAEAHEYGLIDQVIEERSV 198
>gi|53719039|ref|YP_108025.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121601387|ref|YP_993274.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
SAVP1]
gi|124386617|ref|YP_001029282.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10229]
gi|126440189|ref|YP_001059356.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 668]
gi|126450257|ref|YP_001080784.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10247]
gi|126451473|ref|YP_001066627.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1106a]
gi|134277993|ref|ZP_01764708.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|217421679|ref|ZP_03453183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|226197408|ref|ZP_03792985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237812684|ref|YP_002897135.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei MSHR346]
gi|238562204|ref|ZP_00440781.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242317499|ref|ZP_04816515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|251766649|ref|ZP_02264557.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254178458|ref|ZP_04885113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|254189184|ref|ZP_04895695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|254206398|ref|ZP_04912750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|254258354|ref|ZP_04949408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|254297312|ref|ZP_04964765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|254358192|ref|ZP_04974465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|386861423|ref|YP_006274372.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403519055|ref|YP_006653189.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
gi|418382821|ref|ZP_12966747.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|418533694|ref|ZP_13099553.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|418540564|ref|ZP_13106094.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|418546808|ref|ZP_13111999.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|418553028|ref|ZP_13117869.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|67460243|sp|Q63V41.1|CLPP_BURPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201803|sp|A3MKJ8.1|CLPP_BURM7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201804|sp|A2SBG3.1|CLPP_BURM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201805|sp|A1V4X1.1|CLPP_BURMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201806|sp|A3NWA6.1|CLPP_BURP0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201807|sp|A3NAI5.1|CLPP_BURP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52209453|emb|CAH35404.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121230197|gb|ABM52715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei SAVP1]
gi|124294637|gb|ABN03906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10229]
gi|126219682|gb|ABN83188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 668]
gi|126225115|gb|ABN88655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106a]
gi|126243127|gb|ABO06220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10247]
gi|134251643|gb|EBA51722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|147753841|gb|EDK60906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|148027319|gb|EDK85340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|157807201|gb|EDO84371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|157936863|gb|EDO92533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|160699497|gb|EDP89467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|217395421|gb|EEC35439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|225930787|gb|EEH26797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237504658|gb|ACQ96976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei MSHR346]
gi|238523066|gb|EEP86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242140738|gb|EES27140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|243065058|gb|EES47244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254217043|gb|EET06427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|385360654|gb|EIF66568.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|385361174|gb|EIF67066.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|385362934|gb|EIF68724.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|385372144|gb|EIF77269.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|385376976|gb|EIF81604.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|385658551|gb|AFI65974.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403074698|gb|AFR16278.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
Length = 217
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TLA Q + L P T+ RG + D LLKERIVF+ ++D A+ +++
Sbjct: 10 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ +D +++ TG+ E++
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG+ID V
Sbjct: 190 RDTDRDNFMSSEDAKAYGLIDHV 212
>gi|119512812|ref|ZP_01631880.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119462534|gb|EAW43503.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 232
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 130/182 (71%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D+ +A+ I++QLL LD++D KDI L++NSPGGS+
Sbjct: 40 RGERAFDIYSRLLRERIIFLGQQVDNEIANLIVAQLLFLDSEDSEKDIYLYINSPGGSVM 99
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G+ AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 100 AGMGIFDTMKHIRPDVCTICTGLGASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 159
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 160 ATDIEIQAREILYHKQRLNEYLAEHTGQPIERIAEDTERDFFMSPEEAKEYGLIDQVIDR 219
Query: 254 DS 255
+
Sbjct: 220 HA 221
>gi|418324661|ref|ZP_12935892.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
gi|365225160|gb|EHM66411.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
Length = 194
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDADKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA AIYD +Q ++ DV T+ +GM+AS S +L G KGKR+A+PN VMIHQ
Sbjct: 65 NSPGGSVSAGFAIYDTIQHIKPDVQTICVGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I++ TG+S +Q++KD DRD ++S EA +YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTRAKLNKILAERTGQSIDQIEKDTDRDNFLSADEAKDYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 194
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVF+G IDD +A++II+QLL L A+DP K+I +++NSPGGS SA AIY
Sbjct: 20 DIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLAAEDPEKEIYMYINSPGGSTSAGFAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DV T+ G +AS +++L G KGKR A+PN+ +MIHQP GGA GQ D+ I
Sbjct: 80 DTMQYIKPDVHTICTGFAASFGAILLLAGAKGKRSALPNSEIMIHQPHGGAQGQASDIAI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+ I+ ++ TRI + TG+SFE+V+KD+DRD YMS EA+EYG+ID VI
Sbjct: 140 SAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMSAQEALEYGVIDQVI 191
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 137/198 (69%), Gaps = 4/198 (2%)
Query: 60 DVPLSSAPQTPATAM---RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
DVP S A P RG D LLK+RIVFLG I++ +A+ +++QLL L+++
Sbjct: 3 DVPASRAALVPYVVEQTGRGERTYDIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESE 62
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
DP KD+ L++NSPGG ++A MAIYD +Q ++ VST+ G +AS A+++L GG KGKR A
Sbjct: 63 DPEKDVYLYINSPGGVVTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKRIA 122
Query: 176 MPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRY 235
+P+ R+MIHQP+GGA GQ D+EIQA+EI+ ++ +I+ TG+ E+++ D DRD +
Sbjct: 123 LPHARIMIHQPLGGAQGQATDIEIQAKEILRLREVLNQILVDHTGQPVERIKADTDRDFF 182
Query: 236 MSPIEAVEYGIIDGVIDR 253
MS EAV YG++D VID+
Sbjct: 183 MSAPEAVAYGLVDKVIDK 200
>gi|260596809|ref|YP_003209380.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
gi|260215986|emb|CBA28638.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
Length = 214
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 39 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 98
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 99 DTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 158
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 159 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 210
>gi|52082006|ref|YP_080797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647870|ref|ZP_08002088.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|404490886|ref|YP_006714992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423684010|ref|ZP_17658849.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
gi|67460468|sp|Q65EI5.1|CLPP1_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|52005217|gb|AAU25159.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349895|gb|AAU42529.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390211|gb|EFV71020.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|383440784|gb|EID48559.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
Length = 198
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D +I++ TG+ E +++D DRD + + EA EYG+ID V+ R
Sbjct: 133 ATEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAKEYGLIDKVLTR 192
Query: 254 D 254
+
Sbjct: 193 N 193
>gi|428221047|ref|YP_007105217.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994387|gb|AFY73082.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 198
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 130/173 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +ERI+FLG +DD +A+ I++ +L LD++DPTKDIRL++NSPGGS++A MAI+
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPTKDIRLYINSPGGSVTAGMAIF 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV+T+ +G++AS S +L GTKGKRFA+P++R+MIHQPMGG GQ D+EI
Sbjct: 82 DTMQHIKSDVTTICVGLAASMGSFLLMAGTKGKRFALPHSRIMIHQPMGGTRGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+AREI+ K + TG+ E++++D+DRD ++S EA YG+ID VI+
Sbjct: 142 EAREILRIKKQLNLEYAKRTGQPLEKIERDMDRDYFLSAEEAKNYGLIDRVIE 194
>gi|152980689|ref|YP_001353221.1| ATP-dependent Clp protease proteolytic subunit [Janthinobacterium
sp. Marseille]
gi|226706516|sp|A6SY74.1|CLPP_JANMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151280766|gb|ABR89176.1| protease subunit of ATP-dependent Clp proteases [Janthinobacterium
sp. Marseille]
Length = 210
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKERI+FL ++D +A+ I++QLL L++++P KDI
Sbjct: 17 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDI 76
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q ++ +VST+ G++AS + +L G KGKRF++PN+R+
Sbjct: 77 SLYINSPGGSVSAGMAIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRI 136
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I++ TG+S E++ KD DRD +MS A
Sbjct: 137 MIHQPLGGAQGQASDIEIQAREILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADAA 196
Query: 242 VEYGIIDGVI 251
V YG+ID V+
Sbjct: 197 VTYGMIDKVL 206
>gi|157693854|ref|YP_001488316.1| ATP-dependent Clp protease proteolytic subunit [Bacillus pumilus
SAFR-032]
gi|389574748|ref|ZP_10164807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
gi|167008647|sp|A8FHN9.1|CLPP_BACP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157682612|gb|ABV63756.1| S14 family endopeptidase ClpP [Bacillus pumilus SAFR-032]
gi|388425674|gb|EIL83500.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
Length = 198
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D ++++ TG+ E +++D DRD + + EA++YG+ID V+ R
Sbjct: 133 ATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEALQYGLIDKVLTR 192
Query: 254 DS 255
++
Sbjct: 193 NT 194
>gi|78066693|ref|YP_369462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
383]
gi|167586932|ref|ZP_02379320.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ubonensis Bu]
gi|90101404|sp|Q39FE8.1|CLPP_BURS3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77967438|gb|ABB08818.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
sp. 383]
Length = 217
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 142/212 (66%), Gaps = 27/212 (12%)
Query: 60 DVPLSSAPQTPATAMRGAEADAMGL--------------------LLKERIVFLGNNIDD 99
D+ S+APQ G EA A+GL LLKER+VF+ ++D
Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVND 61
Query: 100 FVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAS 159
A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS
Sbjct: 62 QTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAAS 121
Query: 160 TASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFT 219
+ +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ ++++ T
Sbjct: 122 MGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHT 181
Query: 220 GRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
G+ E++ +D DRD +MS +A YG+ID V+
Sbjct: 182 GQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
>gi|18378982|ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
gi|75313059|sp|Q9S834.1|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic; AltName: Full=Endopeptidase ClpP5;
Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease proteolytic subunit ClpP5 [Arabidopsis
thaliana]
gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis thaliana]
gi|332189323|gb|AEE27444.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
Length = 298
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 127/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I++QLL LDA DPTKDI ++VNSPGGS++A MAI+D ++
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+S E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
>gi|298714280|emb|CBJ27396.1| chloroplast clp protease P [Ectocarpus siliculosus]
Length = 264
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 136/195 (69%), Gaps = 1/195 (0%)
Query: 70 PATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPG 129
P + D M LLK+RI+ LG ++D V + +++QLL L DP KDI L++NSPG
Sbjct: 67 PTVGEGSEQMDVMSRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPG 126
Query: 130 GSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGG 189
GS+SA +AIYD +Q + DV+TV GM+AS + +LG G+ GKR ++PN+R+MIHQP+GG
Sbjct: 127 GSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSAGKRKSLPNSRIMIHQPLGG 186
Query: 190 ASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDG 249
A+GQ D+EIQA+EI+ K +S +T + +++++D DRD +M+PIEA+EYG+ID
Sbjct: 187 AAGQAADIEIQAKEILFTKRLLNGYMSEYTDQPADKIEEDTDRDFFMTPIEAMEYGLIDE 246
Query: 250 VID-RDSIIPLVPVP 263
VI + S +PL +P
Sbjct: 247 VIKTKTSELPLPAMP 261
>gi|283797647|ref|ZP_06346800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. M62/1]
gi|291074652|gb|EFE12016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. M62/1]
gi|295092868|emb|CBK78975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cf. saccharolyticum K10]
gi|295114657|emb|CBL35504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SM4/1]
Length = 193
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG + D LLKERIVFLG + D A I++QLL L+++DP KDI
Sbjct: 1 MSLVPYVIESTSRGERSYDIFSRLLKERIVFLGEEVTDVSASLIVAQLLFLESEDPNKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD + ++ DVST+ +GM+AS + +L GG KGKR A+PN V
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGAKGKRLALPNAEV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ K I++ TG+ +E +++D DRD YM+ EA
Sbjct: 121 MIHQPSGGARGQATEIQIVAENILRTKKKLNEILAANTGQPYEVIERDTDRDNYMTAEEA 180
Query: 242 VEYGIIDGVI 251
++YG+ID VI
Sbjct: 181 LKYGLIDRVI 190
>gi|428305261|ref|YP_007142086.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428246796|gb|AFZ12576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 198
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 131/173 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +ERI+FLG ++DD +A+ II+ +L LD++DP KDI L++NSPGGS++A MAI+
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGSVTAGMAIF 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV T+ +G++AS S +L GTKGKR A+P++R+MIHQP GGA GQ D+EI
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGARGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+AREI+ + +I + TG+ E+++KD+DRD +MS EA+EYG+ID VI+
Sbjct: 142 EAREIIRIRRQLNQIYANNTGKPLEKIEKDMDRDFFMSAQEAMEYGLIDRVIE 194
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 139/200 (69%), Gaps = 7/200 (3%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERI+FLGN ID+ VA I++QL+ L+++DP +DI +++
Sbjct: 30 PMVIETSGRGERAFDIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDPERDIYIYI 89
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + IYD +Q +R DVSTV +GM+AS + +L G KGKR ++P++R+MIHQ
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQ 149
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P GGA GQ D+ IQAREI + +++ TG+ +Q+++D +RDR+M+ EA+EYG
Sbjct: 150 PSGGAHGQETDIIIQAREIEKIRKLLDELLARHTGKDVKQIREDSERDRWMNAEEALEYG 209
Query: 246 IIDGVIDRDSIIPLVPVPEK 265
IID V ++ P+PEK
Sbjct: 210 IIDSVFEKR------PMPEK 223
>gi|340758793|ref|ZP_08695375.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
gi|251836566|gb|EES65101.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
Length = 191
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 127/169 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+AI++QLL L+A+DP KDI +++NSPGG ++A MAIYD +
Sbjct: 23 LLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPGGVVTAGMAIYDTMNY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV TV +G +AS +L+LG G +GKR+A+ ++R+MIHQP+GGA GQ D+EIQA+EI
Sbjct: 83 IKPDVQTVCIGQAASMGALLLGAGARGKRYALEHSRIMIHQPLGGARGQATDIEIQAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K+ ++I++ TG+S ++ D +RD YMS EA YG+ID V +
Sbjct: 143 LRMKEMLSQILADCTGKSLSEIITDTERDNYMSAEEAKNYGLIDQVFKK 191
>gi|69249001|ref|ZP_00604844.1| Peptidase S14, ClpP [Enterococcus faecium DO]
gi|227550370|ref|ZP_03980419.1| endopeptidase Clp [Enterococcus faecium TX1330]
gi|257879589|ref|ZP_05659242.1| peptidase S14 [Enterococcus faecium 1,230,933]
gi|257882608|ref|ZP_05662261.1| peptidase S14 [Enterococcus faecium 1,231,502]
gi|257885031|ref|ZP_05664684.1| peptidase S14 [Enterococcus faecium 1,231,501]
gi|257888403|ref|ZP_05668056.1| peptidase S14 [Enterococcus faecium 1,141,733]
gi|257890257|ref|ZP_05669910.1| peptidase S14 [Enterococcus faecium 1,231,410]
gi|257893441|ref|ZP_05673094.1| peptidase S14 [Enterococcus faecium 1,231,408]
gi|257897223|ref|ZP_05676876.1| peptidase S14 [Enterococcus faecium Com12]
gi|257899224|ref|ZP_05678877.1| peptidase S14 [Enterococcus faecium Com15]
gi|260559746|ref|ZP_05831926.1| peptidase S14 [Enterococcus faecium C68]
gi|261207321|ref|ZP_05922008.1| peptidase S14 [Enterococcus faecium TC 6]
gi|289566520|ref|ZP_06446943.1| Clp protease [Enterococcus faecium D344SRF]
gi|293377995|ref|ZP_06624173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium PC4.1]
gi|293557243|ref|ZP_06675791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1039]
gi|293559757|ref|ZP_06676278.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1162]
gi|293567607|ref|ZP_06678951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1071]
gi|293570370|ref|ZP_06681427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E980]
gi|294616541|ref|ZP_06696319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1636]
gi|294618382|ref|ZP_06697960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1679]
gi|294623239|ref|ZP_06702110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium U0317]
gi|314938917|ref|ZP_07846184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a04]
gi|314943860|ref|ZP_07850593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133C]
gi|314948100|ref|ZP_07851501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0082]
gi|314951634|ref|ZP_07854679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133A]
gi|314993860|ref|ZP_07859194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133B]
gi|314996702|ref|ZP_07861725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a01]
gi|383329510|ref|YP_005355394.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium Aus0004]
gi|389869357|ref|YP_006376780.1| endopeptidase ClpP [Enterococcus faecium DO]
gi|406580902|ref|ZP_11056088.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD4E]
gi|406583169|ref|ZP_11058259.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD3E]
gi|406585497|ref|ZP_11060485.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD2E]
gi|406590622|ref|ZP_11064983.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD1E]
gi|410936937|ref|ZP_11368799.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD5E]
gi|415891144|ref|ZP_11549668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E4453]
gi|416136886|ref|ZP_11598791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E4452]
gi|424762955|ref|ZP_18190434.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium TX1337RF]
gi|424792101|ref|ZP_18218369.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium V689]
gi|424802531|ref|ZP_18228038.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium S447]
gi|424825779|ref|ZP_18250737.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R501]
gi|424857682|ref|ZP_18281788.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R499]
gi|424908059|ref|ZP_18331463.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R497]
gi|424951086|ref|ZP_18366214.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R496]
gi|424953378|ref|ZP_18368346.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R494]
gi|424957863|ref|ZP_18372566.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R446]
gi|424961347|ref|ZP_18375797.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1986]
gi|424963673|ref|ZP_18377851.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1190]
gi|424968135|ref|ZP_18381785.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1140]
gi|424971181|ref|ZP_18384635.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1139]
gi|424973833|ref|ZP_18387096.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1137]
gi|424977109|ref|ZP_18390143.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1123]
gi|424981821|ref|ZP_18394526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV99]
gi|424983862|ref|ZP_18396430.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV69]
gi|424988117|ref|ZP_18400454.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV38]
gi|424992426|ref|ZP_18404488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV26]
gi|424993331|ref|ZP_18405329.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV168]
gi|424997029|ref|ZP_18408801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV165]
gi|425001704|ref|ZP_18413194.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV161]
gi|425003377|ref|ZP_18414749.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV102]
gi|425007990|ref|ZP_18419093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV1]
gi|425011742|ref|ZP_18422612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium E422]
gi|425014709|ref|ZP_18425371.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium E417]
gi|425016375|ref|ZP_18426940.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium C621]
gi|425021173|ref|ZP_18431448.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium C497]
gi|425023484|ref|ZP_18433603.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium C1904]
gi|425032322|ref|ZP_18437379.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 515]
gi|425033919|ref|ZP_18438846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 514]
gi|425037864|ref|ZP_18442504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 513]
gi|425040909|ref|ZP_18445347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 511]
gi|425044357|ref|ZP_18448521.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 510]
gi|425048810|ref|ZP_18452694.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 509]
gi|425050879|ref|ZP_18454584.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 506]
gi|425054513|ref|ZP_18458019.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 505]
gi|425059261|ref|ZP_18462610.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 504]
gi|425061411|ref|ZP_18464647.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 503]
gi|427395494|ref|ZP_18888416.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus durans
FB129-CNAB-4]
gi|430821716|ref|ZP_19440307.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0045]
gi|430823978|ref|ZP_19442546.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0120]
gi|430826836|ref|ZP_19445006.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0164]
gi|430829602|ref|ZP_19447694.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0269]
gi|430831200|ref|ZP_19449253.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0333]
gi|430833814|ref|ZP_19451824.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0679]
gi|430837123|ref|ZP_19455099.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0680]
gi|430839204|ref|ZP_19457146.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0688]
gi|430840632|ref|ZP_19458555.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1007]
gi|430844924|ref|ZP_19462821.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1050]
gi|430847964|ref|ZP_19465797.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1133]
gi|430851134|ref|ZP_19468889.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1185]
gi|430853597|ref|ZP_19471325.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1258]
gi|430855369|ref|ZP_19473078.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1392]
gi|430859585|ref|ZP_19477195.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1552]
gi|430862282|ref|ZP_19479599.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1573]
gi|430867212|ref|ZP_19482286.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1574]
gi|430869968|ref|ZP_19483123.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1575]
gi|430963260|ref|ZP_19487552.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1576]
gi|431011179|ref|ZP_19489923.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1578]
gi|431049929|ref|ZP_19493289.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1590]
gi|431064986|ref|ZP_19493809.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1604]
gi|431113890|ref|ZP_19497797.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1613]
gi|431183652|ref|ZP_19499960.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1620]
gi|431237171|ref|ZP_19503314.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1622]
gi|431264106|ref|ZP_19505994.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1623]
gi|431290452|ref|ZP_19506587.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1626]
gi|431384188|ref|ZP_19511447.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1627]
gi|431444881|ref|ZP_19513610.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1630]
gi|431522793|ref|ZP_19516742.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1634]
gi|431546194|ref|ZP_19518819.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1731]
gi|431594849|ref|ZP_19521955.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1861]
gi|431700718|ref|ZP_19524886.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1904]
gi|431738372|ref|ZP_19527316.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1972]
gi|431741990|ref|ZP_19530889.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2039]
gi|431744931|ref|ZP_19533795.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2071]
gi|431745378|ref|ZP_19534225.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2134]
gi|431748833|ref|ZP_19537587.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2297]
gi|431751193|ref|ZP_19539885.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2620]
gi|431755327|ref|ZP_19543981.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2883]
gi|431758325|ref|ZP_19546952.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E3083]
gi|431760487|ref|ZP_19549085.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E3346]
gi|431763790|ref|ZP_19552338.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E3548]
gi|431766038|ref|ZP_19554535.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E4215]
gi|431768694|ref|ZP_19557127.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1321]
gi|431771307|ref|ZP_19559692.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1644]
gi|431772745|ref|ZP_19561083.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2369]
gi|431775288|ref|ZP_19563562.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2560]
gi|431780257|ref|ZP_19568441.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E4389]
gi|431781444|ref|ZP_19569592.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E6012]
gi|431786180|ref|ZP_19574195.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E6045]
gi|447913439|ref|YP_007394851.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium NRRL B-2354]
gi|68194308|gb|EAN08823.1| Peptidase S14, ClpP [Enterococcus faecium DO]
gi|227180509|gb|EEI61481.1| endopeptidase Clp [Enterococcus faecium TX1330]
gi|257813817|gb|EEV42575.1| peptidase S14 [Enterococcus faecium 1,230,933]
gi|257818266|gb|EEV45594.1| peptidase S14 [Enterococcus faecium 1,231,502]
gi|257820883|gb|EEV48017.1| peptidase S14 [Enterococcus faecium 1,231,501]
gi|257824457|gb|EEV51389.1| peptidase S14 [Enterococcus faecium 1,141,733]
gi|257826617|gb|EEV53243.1| peptidase S14 [Enterococcus faecium 1,231,410]
gi|257829820|gb|EEV56427.1| peptidase S14 [Enterococcus faecium 1,231,408]
gi|257833788|gb|EEV60209.1| peptidase S14 [Enterococcus faecium Com12]
gi|257837136|gb|EEV62210.1| peptidase S14 [Enterococcus faecium Com15]
gi|260074414|gb|EEW62736.1| peptidase S14 [Enterococcus faecium C68]
gi|260078381|gb|EEW66085.1| peptidase S14 [Enterococcus faecium TC 6]
gi|289161674|gb|EFD09551.1| Clp protease [Enterococcus faecium D344SRF]
gi|291589708|gb|EFF21512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1071]
gi|291590588|gb|EFF22319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1636]
gi|291595359|gb|EFF26674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1679]
gi|291597346|gb|EFF28526.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium U0317]
gi|291600607|gb|EFF30911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1039]
gi|291606305|gb|EFF35718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1162]
gi|291609548|gb|EFF38813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E980]
gi|292643360|gb|EFF61492.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium PC4.1]
gi|313589140|gb|EFR67985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a01]
gi|313591670|gb|EFR70515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133B]
gi|313596230|gb|EFR75075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133A]
gi|313597478|gb|EFR76323.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133C]
gi|313641791|gb|EFS06371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a04]
gi|313645436|gb|EFS10016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0082]
gi|364091601|gb|EHM34048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E4452]
gi|364094115|gb|EHM36318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E4453]
gi|378939204|gb|AFC64276.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium Aus0004]
gi|388534606|gb|AFK59798.1| endopeptidase ClpP [Enterococcus faecium DO]
gi|402423642|gb|EJV55849.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium TX1337RF]
gi|402918141|gb|EJX38861.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium V689]
gi|402919694|gb|EJX40273.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium S447]
gi|402925182|gb|EJX45348.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R501]
gi|402928217|gb|EJX48102.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R499]
gi|402928699|gb|EJX48532.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R497]
gi|402931437|gb|EJX51017.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R496]
gi|402939229|gb|EJX58163.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R494]
gi|402942468|gb|EJX61050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium R446]
gi|402944055|gb|EJX62502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1986]
gi|402948398|gb|EJX66537.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1190]
gi|402952711|gb|EJX70493.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1140]
gi|402957805|gb|EJX75168.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1137]
gi|402959854|gb|EJX77065.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1139]
gi|402962532|gb|EJX79462.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV99]
gi|402967058|gb|EJX83648.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium P1123]
gi|402970551|gb|EJX86883.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV69]
gi|402972947|gb|EJX89110.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV38]
gi|402973330|gb|EJX89461.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV26]
gi|402982887|gb|EJX98323.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV168]
gi|402985582|gb|EJY00779.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV161]
gi|402987006|gb|EJY02101.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV165]
gi|402992117|gb|EJY06843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV102]
gi|402993816|gb|EJY08400.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium ERV1]
gi|402995714|gb|EJY10152.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium E422]
gi|402997919|gb|EJY12214.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium E417]
gi|403007197|gb|EJY20789.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium C621]
gi|403007632|gb|EJY21191.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium C497]
gi|403009804|gb|EJY23223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium C1904]
gi|403013114|gb|EJY26243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 515]
gi|403020813|gb|EJY33311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 513]
gi|403021887|gb|EJY34305.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 514]
gi|403027519|gb|EJY39404.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 511]
gi|403029728|gb|EJY41467.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 509]
gi|403030065|gb|EJY41784.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 510]
gi|403035827|gb|EJY47210.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 505]
gi|403035977|gb|EJY47349.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 504]
gi|403039694|gb|EJY50826.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 506]
gi|403041549|gb|EJY52560.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecium 503]
gi|404453352|gb|EKA00415.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD4E]
gi|404457076|gb|EKA03652.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD3E]
gi|404462588|gb|EKA08318.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD2E]
gi|404469097|gb|EKA13931.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD1E]
gi|410734530|gb|EKQ76449.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus sp.
GMD5E]
gi|425723994|gb|EKU86880.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus durans
FB129-CNAB-4]
gi|430438198|gb|ELA48671.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0045]
gi|430441619|gb|ELA51711.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0120]
gi|430444631|gb|ELA54462.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0164]
gi|430480355|gb|ELA57531.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0269]
gi|430482071|gb|ELA59212.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0333]
gi|430485714|gb|ELA62595.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0679]
gi|430487904|gb|ELA64612.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0680]
gi|430491201|gb|ELA67683.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E0688]
gi|430494838|gb|ELA71056.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1007]
gi|430496355|gb|ELA72460.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1050]
gi|430534538|gb|ELA74982.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1185]
gi|430536340|gb|ELA76716.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1133]
gi|430540678|gb|ELA80880.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1258]
gi|430543420|gb|ELA83489.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1552]
gi|430547375|gb|ELA87311.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1392]
gi|430548860|gb|ELA88707.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1573]
gi|430550568|gb|ELA90358.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1574]
gi|430555685|gb|ELA95222.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1576]
gi|430559345|gb|ELA98704.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1575]
gi|430560201|gb|ELA99507.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1578]
gi|430560338|gb|ELA99635.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1590]
gi|430568606|gb|ELB07645.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1604]
gi|430568736|gb|ELB07767.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1613]
gi|430572735|gb|ELB11585.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1622]
gi|430573238|gb|ELB12062.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1620]
gi|430576542|gb|ELB15193.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1623]
gi|430580946|gb|ELB19398.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1627]
gi|430582552|gb|ELB20974.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1626]
gi|430584975|gb|ELB23284.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1634]
gi|430586043|gb|ELB24309.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1630]
gi|430590775|gb|ELB28821.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1861]
gi|430591513|gb|ELB29542.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1731]
gi|430597424|gb|ELB35225.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1904]
gi|430597469|gb|ELB35265.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1972]
gi|430600838|gb|ELB38465.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2039]
gi|430604706|gb|ELB42140.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2071]
gi|430610670|gb|ELB47810.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2134]
gi|430612746|gb|ELB49778.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2297]
gi|430615847|gb|ELB52785.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2620]
gi|430617327|gb|ELB54201.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2883]
gi|430617383|gb|ELB54256.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E3083]
gi|430621614|gb|ELB58366.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E3548]
gi|430623831|gb|ELB60502.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E3346]
gi|430627304|gb|ELB63816.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E4215]
gi|430628562|gb|ELB64996.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1321]
gi|430633502|gb|ELB69662.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E1644]
gi|430637824|gb|ELB73823.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2369]
gi|430640399|gb|ELB76239.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E4389]
gi|430643322|gb|ELB79070.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E2560]
gi|430645975|gb|ELB81472.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E6045]
gi|430649805|gb|ELB85173.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium E6012]
gi|445189148|gb|AGE30790.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium NRRL B-2354]
Length = 197
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L + D +A++II+QLL LDAQD KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD + V+ADV T+ +GM+AS S +L GTKGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVTAGMAIYDTMNFVKADVQTIVMGMAASMGSFLLTAGTKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ +I++ TG+ E ++KD DRD YM+ +A YG
Sbjct: 125 PLGGAQGQATEIEIAARHILQTRERLNKILAERTGQPLEVIEKDTDRDNYMTAEQAKAYG 184
Query: 246 IIDGVIDRDS 255
+ID V++ S
Sbjct: 185 LIDEVMENSS 194
>gi|429089532|ref|ZP_19152264.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
universalis NCTC 9529]
gi|429122487|ref|ZP_19183064.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 680]
gi|426322955|emb|CCK13801.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 680]
gi|426509335|emb|CCK17376.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
universalis NCTC 9529]
Length = 189
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 14 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 73
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 74 DTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 133
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 134 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 185
>gi|260584984|ref|ZP_05852727.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella elegans ATCC 700633]
gi|260157290|gb|EEW92363.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella elegans ATCC 700633]
Length = 197
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ + I D +A+AII+QLL LDAQDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMVSGPIHDDMANAIIAQLLFLDAQDPEKDIYMYINSPGGSVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD + ++ADV T+A+G++AS S +L GTKGKR+A+PN ++IHQP+GGA GQ
Sbjct: 73 AGLAIYDTMNFIKADVQTIAMGLAASMGSFLLTAGTKGKRYALPNAEILIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AR+I+ ++ I++ TG+ + ++KD DRD YM+ EA+EYG+ID ++
Sbjct: 133 ATEIEIAARQILKTRERLNAILAKQTGQKLKTIEKDTDRDNYMTAQEALEYGLIDAIM 190
>gi|297843050|ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata]
gi|297335248|gb|EFH65665.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata]
Length = 298
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 127/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I++QLL LDA DPTKDI ++VNSPGGS++A MAI+D ++
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+S E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG A D LL+ERIVFLG ++D +A+ I++QLL L+A DP KDI L++
Sbjct: 3 PTVIESSGRGERAFDIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA M I+D + VR DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGEKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K + ++ TG+ ++++ D DRD +MS EA++YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKGKLNQHLADHTGQPLDKIEVDTDRDFFMSAAEAMDYG 182
Query: 246 IIDGVIDR 253
+ID VID+
Sbjct: 183 LIDQVIDK 190
>gi|194015348|ref|ZP_03053964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
gi|194012752|gb|EDW22318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
Length = 198
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ +D ++++ TG+ E +++D DRD + + EA++YG+ID V+ R
Sbjct: 133 ATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEALQYGLIDKVLTR 192
Query: 254 DS 255
++
Sbjct: 193 NA 194
>gi|160878535|ref|YP_001557503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
phytofermentans ISDg]
gi|160427201|gb|ABX40764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
phytofermentans ISDg]
Length = 193
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG + D A I++QLL L+A+DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDVSASVIVAQLLFLEAEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD + ++ DVST+ +GM+AS + +L GG KGKRFA+PN V
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNAEV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D++I A I+ K I+S TG+ E V+ D +RD YMS EA
Sbjct: 121 MIHQPSGGAKGQATDIQIVAENILKIKKKLNTILSENTGKPLEVVEVDTERDYYMSAEEA 180
Query: 242 VEYGIIDGVI 251
YGIID VI
Sbjct: 181 KNYGIIDSVI 190
>gi|108804374|ref|YP_644311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
gi|116243164|sp|Q1AVS9.1|CLPP_RUBXD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|108765617|gb|ABG04499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
Length = 200
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 133/179 (74%), Gaps = 2/179 (1%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG +DD VA+AI++QLL L+++DP +DI L++NSPGGS+S
Sbjct: 19 RGERAMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVS 78
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP-MGGASG 192
A +AIYD +Q V+ D+ T ALGM+AS + +L GTKGKRFA+PNTR+++HQP +GG +G
Sbjct: 79 AGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAG 138
Query: 193 QVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
Q DVEI ARE++ K I+S TG+ ++++++D DRD M EA+EYG+ID ++
Sbjct: 139 QASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEYGLIDDIV 197
>gi|374369272|ref|ZP_09627306.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
basilensis OR16]
gi|373099185|gb|EHP40272.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
basilensis OR16]
Length = 216
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 144/212 (67%), Gaps = 7/212 (3%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFV 101
R +T+ AL+ Q L P + RG A D LLKER++F+ ++D
Sbjct: 9 RLATTQASALETQ------GLGLVPMVVEQSGRGERAYDIYSRLLKERLIFMVGEVNDQT 62
Query: 102 ADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTA 161
A+ +++QLL L++++P KDI L++NSPGGS+SA +AIYD +Q V+ DV+T+ +GM+AS
Sbjct: 63 ANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPDVATLCMGMAASMG 122
Query: 162 SLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGR 221
+ +L G KGKR A+PN+R+MIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+
Sbjct: 123 AFLLSAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQ 182
Query: 222 SFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
E++ +D DRD +MS +AV+YG+ID V+ R
Sbjct: 183 PVEKIARDTDRDNFMSGDQAVDYGLIDKVLTR 214
>gi|156935010|ref|YP_001438926.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
gi|156533264|gb|ABU78090.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
Length = 194
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 19 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 79 DTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 139 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 190
>gi|304407273|ref|ZP_07388926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304343714|gb|EFM09555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 195
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG ++D VA++II+QLL L A DP KDI L++NSPGGS++
Sbjct: 15 RGERAYDIYSRLLKDRIIFLGTGVNDIVANSIIAQLLFLAADDPEKDISLYINSPGGSIT 74
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +GM+AS + +L G GKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 75 AGMAIYDTMQFIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEVMIHQPLGGAEGQ 134
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI+A+ I+ +D I++ + + E+++KD DRD +MS EA +YG+ID VID+
Sbjct: 135 ASDIEIRAKRILKMRDKLNGILAERSNQPLERIEKDTDRDYFMSAEEARQYGLIDKVIDK 194
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 127/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLGN I D A+ +I+QLL LDA++P +DI L++NSPGG +S+ +AIYD +Q
Sbjct: 24 LLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYLYINSPGGYVSSGLAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADV T+ +G ++S A+L+L GG KGKR A+P++R+M+HQP GGA+GQ D+ IQA+E+
Sbjct: 84 IKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGATGQASDIAIQAKEV 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ + + TG+S EQ+QKD +RD YM+ EA YGIID VI
Sbjct: 144 LKLKEVLNGLYTKHTGKSMEQIQKDTERDLYMTAEEAQTYGIIDSVI 190
>gi|388566136|ref|ZP_10152607.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenophaga sp. PBC]
gi|388266642|gb|EIK92161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenophaga sp. PBC]
Length = 205
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER+VFL ++D A+ I++QLL L++++P KDI
Sbjct: 9 LGMVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDQSANLIVAQLLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS+SA MAI+D + ++ DVST+ +GM+AS + +L GTKGKRF++PN++V
Sbjct: 69 SFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCVGMAASMGAFLLAAGTKGKRFSLPNSKV 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ ++EI AREI+ ++ +I++ TG+ E++++D +RD Y+S E+
Sbjct: 129 MIHQPLGGTQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLSAAES 188
Query: 242 VEYGIIDGVIDR 253
EYG+ID VID+
Sbjct: 189 AEYGLIDKVIDK 200
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 129/168 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIVFLG + D VA++I++QLL L+++DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 26 LLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDIHLYINSPGGSVTAGMAIYDTMQY 85
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+++ VST+ +GM+AS A+++L GG +GKR A+PN VMIHQP+GG SGQ D+EI AR I
Sbjct: 86 IKSPVSTICVGMAASMAAILLSGGARGKRLALPNAEVMIHQPLGGTSGQASDIEIHARNI 145
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++ + I++ TG+ E+V +D DRD +M+ EA++YG+ID +I+
Sbjct: 146 LNTRKRMNAILARHTGQDVEKVAQDTDRDNFMTAQEALDYGLIDRIIE 193
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 129/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG I+D VA+ II+QLL L++QDP KDI L++NSPGGS+++ + IY
Sbjct: 20 DIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFLYINSPGGSVTSGLGIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ D+ST+ +G +AS +++L G KGKR+++P +R+MIHQP GGA G +D++I
Sbjct: 80 DTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRIMIHQPWGGAEGTAIDIQI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ KD+ I+S TG+S E+++KD +RD +M+ EA+ YG+ID VI
Sbjct: 140 HAREILRLKDDLNNILSKHTGQSLEKIEKDTERDFFMNAQEALNYGLIDKVI 191
>gi|15485610|emb|CAC67407.1| Clp protease 2 proteolytic subunit [Solanum lycopersicum]
Length = 299
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 138/201 (68%), Gaps = 9/201 (4%)
Query: 60 DVPLSSAPQTPATAMRGAEADAM---------GLLLKERIVFLGNNIDDFVADAIISQLL 110
DV + S+P P A +G M L + RI+ G +DD +A+ I++QLL
Sbjct: 82 DVQIPSSPYFPTYAAQGQGPPPMVQERFQSVISQLFQYRIIRCGGAVDDDMANVIVAQLL 141
Query: 111 LLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTK 170
LDA DPTKDI ++VNSPGGS++A MA++D ++ +R DVSTV +G++AS + +L GTK
Sbjct: 142 YLDAVDPTKDIVMYVNSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTK 201
Query: 171 GKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDI 230
GKR+++PN+R+MIHQP+GGA G D+EIQA E++H+K N ++ TG+S +++ +D
Sbjct: 202 GKRYSLPNSRIMIHQPLGGAQGGQSDIEIQANEMLHHKANLNGYLAYQTGQSLDRINQDT 261
Query: 231 DRDRYMSPIEAVEYGIIDGVI 251
DRD +MS EA EYG+IDGVI
Sbjct: 262 DRDFFMSAKEAKEYGLIDGVI 282
>gi|365848314|ref|ZP_09388791.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
gi|364571022|gb|EHM48621.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
Length = 220
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 45 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 104
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 105 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 164
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K +++ TG+S EQ++ D +RDR++S EAVEYG++D ++
Sbjct: 165 HAKEILKVKARMNELMAHHTGQSLEQIENDTERDRFLSAGEAVEYGLVDSIL 216
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVF+G IDD +A++II+QLL L A+DP KDI +++NSPGGS SA AIY
Sbjct: 20 DIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDPEKDIYMYINSPGGSTSAGFAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ +V T+ G +AS +++L G KGKR A+PN+ +MIHQP GGA GQ D+ I
Sbjct: 80 DTMQYIKPEVHTICTGFAASFGAILLLAGAKGKRSALPNSEIMIHQPHGGAQGQASDIAI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+ I+ ++ TRI + TG+SFE+V+KD+DRD YMS EA+EYG+ID VI
Sbjct: 140 SAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMSAQEALEYGVIDQVI 191
>gi|424865494|ref|ZP_18289359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
gi|400758762|gb|EJP72964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
Length = 204
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG + D LLKER++FL IDD +++ +++QLL L++++P KDI +++N
Sbjct: 15 QTP----RGERSFDIYSRLLKERVIFLTGPIDDHISNLVVAQLLFLESENPEKDISIYIN 70
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS+SA +AIYD +Q + + VST+ +G +AS +L+L GG KGKRFA+PN+RVMIHQP
Sbjct: 71 SPGGSISAGLAIYDTMQFISSSVSTMCIGQAASMGALLLAGGDKGKRFALPNSRVMIHQP 130
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG GQ D EI A+EI++ K I++ TG++ ++++KD DRD +++ EAV+YG+
Sbjct: 131 LGGFQGQASDFEIHAKEILYMKKIVNEILAKHTGQTVKKIEKDTDRDNFLNAEEAVKYGL 190
Query: 247 IDGVIDRDSI 256
+D +ID+ I
Sbjct: 191 VDKIIDKRDI 200
>gi|352517153|ref|YP_004886470.1| ATP-dependent Clp protease proteolytic subunit [Tetragenococcus
halophilus NBRC 12172]
gi|348601260|dbj|BAK94306.1| ATP-dependent Clp protease proteolytic subunit [Tetragenococcus
halophilus NBRC 12172]
Length = 193
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 122/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+ L + D ++++IISQLL LDAQD KDI L++NSPGGS++A AIYD +
Sbjct: 24 LLKDRIIMLSGEVTDDLSNSIISQLLFLDAQDSEKDIYLYINSPGGSVTAGFAIYDTINF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ADV T+ LGM+AS S +L GTKGKRFA+PN ++IHQP+GGA GQ ++EI AR I
Sbjct: 84 VKADVQTIVLGMAASMGSFLLTAGTKGKRFALPNAEILIHQPLGGAQGQATEIEIAARHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ +D I++ TG+S E +++D DRD YM+ EA EYG+ID ++
Sbjct: 144 LKTRDRLNEILAERTGQSLEVIKRDTDRDNYMTAEEAKEYGLIDDIM 190
>gi|428773238|ref|YP_007165026.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428687517|gb|AFZ47377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 195
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERIVFLG + D +A+++++QLLLL+A+DP KDI L++
Sbjct: 3 PTVIETSGRGERAFDIYSRLLRERIVFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + I+D + ++ DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGLGIFDTMNQIQPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K ++ TG+ E++++D +RD +MS EAV YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKKQLNHYMASHTGQPLEKIEEDTERDFFMSAEEAVNYG 182
Query: 246 IIDGVIDR 253
+ID V+ R
Sbjct: 183 LIDRVVTR 190
>gi|56414396|ref|YP_151471.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197363316|ref|YP_002142953.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|67460194|sp|Q5PFN4.1|CLPP_SALPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706471|sp|B5BD83.1|CLPP_SALPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56128653|gb|AAV78159.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094793|emb|CAR60326.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 207
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A ++IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|171463607|ref|YP_001797720.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193145|gb|ACB44106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 209
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LL+ER++FL ++D A+ +I+QLL L++++P K+I
Sbjct: 16 LGLVPMVIETSGRGERAYDIYSRLLRERVIFLVGEVNDQTANLVIAQLLFLESENPDKEI 75
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG++SA +AIYD +Q ++ VST+ +GM+AS + +L G GKR+A+PN+RV
Sbjct: 76 SLYINSPGGAVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGENGKRYALPNSRV 135
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ +I++ TG+S E + KD DRD +MS +A
Sbjct: 136 MIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETIAKDTDRDNFMSAEQA 195
Query: 242 VEYGIIDGVIDR 253
+YG+ID VI++
Sbjct: 196 RDYGLIDKVIEK 207
>gi|301598440|pdb|3HLN|A Chain A, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598441|pdb|3HLN|B Chain B, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598442|pdb|3HLN|C Chain C, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598443|pdb|3HLN|D Chain D, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598444|pdb|3HLN|E Chain E, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598445|pdb|3HLN|F Chain F, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598446|pdb|3HLN|G Chain G, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598447|pdb|3HLN|H Chain H, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598448|pdb|3HLN|I Chain I, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598449|pdb|3HLN|J Chain J, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598450|pdb|3HLN|K Chain K, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598451|pdb|3HLN|L Chain L, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598452|pdb|3HLN|M Chain M, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598453|pdb|3HLN|N Chain N, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598454|pdb|3HLN|O Chain O, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598455|pdb|3HLN|P Chain P, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598456|pdb|3HLN|Q Chain Q, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598457|pdb|3HLN|R Chain R, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598458|pdb|3HLN|S Chain S, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598459|pdb|3HLN|T Chain T, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598460|pdb|3HLN|U Chain U, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598461|pdb|3HLN|V Chain V, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598462|pdb|3HLN|W Chain W, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598463|pdb|3HLN|X Chain X, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598464|pdb|3HLN|Y Chain Y, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598465|pdb|3HLN|Z Chain Z, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598466|pdb|3HLN|1 Chain 1, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598467|pdb|3HLN|2 Chain 2, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
Length = 193
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 78 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
REI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 138 HCREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 131/182 (71%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D+ +A+ I++QLL LDA D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA EYG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVIDR 190
Query: 254 DS 255
+
Sbjct: 191 HA 192
>gi|359299708|ref|ZP_09185547.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306845|ref|ZP_10825880.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
gi|400373868|gb|EJP26793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
Length = 197
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 124/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++QLL L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLNGQVEDQMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D+EI AREI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIEIHAREI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ TR ++ +G+ FE++ D +RD +MS EA+EYG+ID V+
Sbjct: 144 LKLKEMLTRKMAEHSGQPFEKLAADTERDNFMSATEAMEYGLIDKVL 190
>gi|433324497|ref|ZP_20401784.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
gi|432347011|gb|ELL41475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
Length = 207
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQANDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|413962707|ref|ZP_11401934.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
SJ98]
gi|413928539|gb|EKS67827.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
SJ98]
Length = 217
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LLKER+VFL ++D A+ +++QLL L++++P KDI
Sbjct: 24 LGLVPMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESENPDKDI 83
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR A+PN RV
Sbjct: 84 SLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAAGAKGKRVALPNARV 143
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ K+ +++S TG+ E++ +D DRD +MS +A
Sbjct: 144 MIHQPLGGARGQASDIEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFMSGDDA 203
Query: 242 VEYGIIDGVIDR 253
YG++D V+ +
Sbjct: 204 QAYGLVDQVLHK 215
>gi|354722308|ref|ZP_09036523.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter mori
LMG 25706]
Length = 207
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D V+
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAPEAVEYGLVDSVL 203
>gi|225389281|ref|ZP_03759005.1| hypothetical protein CLOSTASPAR_03027 [Clostridium asparagiforme
DSM 15981]
gi|225044660|gb|EEG54906.1| hypothetical protein CLOSTASPAR_03027 [Clostridium asparagiforme
DSM 15981]
Length = 193
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A I++QLL L+A+DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLIVAQLLFLEAEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD + +++DVST+ +GM+AS + +L GG KGKRF++PN+++
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSGGAKGKRFSLPNSQI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ K I++ TG+ E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAQGQATEIKIVAENILKTKRKLNEILAANTGKPLEVIERDTERDYYMSAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID +I
Sbjct: 181 REYGLIDQII 190
>gi|427404659|ref|ZP_18895399.1| ATP-dependent Clp protease proteolytic subunit [Massilia timonae
CCUG 45783]
gi|425716830|gb|EKU79799.1| ATP-dependent Clp protease proteolytic subunit [Massilia timonae
CCUG 45783]
Length = 207
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER++FL ++D +A+ I++Q+L L++++P KDI
Sbjct: 12 LGMVPMVIEQSGRGERAYDIYSRLLKERVIFLVGPVNDQMANLIVAQMLFLESENPDKDI 71
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AI+D + ++ DVST+ G++AS + +L G KGKRF++PN+RV
Sbjct: 72 SLYINSPGGSVSAGLAIFDTMNFIKPDVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRV 131
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG+ G D+EIQA+EI++ ++ RI++ TG+S EQ+ KD DRDR+MS E+
Sbjct: 132 MIHQPSGGSQGMASDIEIQAKEILYLRERLARIMADNTGQSIEQIHKDTDRDRFMSAEES 191
Query: 242 VEYGIIDGVI 251
VEYG+ID V+
Sbjct: 192 VEYGMIDKVL 201
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 135/185 (72%), Gaps = 5/185 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG + D LLKERI+FLG+ ++D VA+ I++QLL L+A+DP KDI ++N
Sbjct: 20 QTP----RGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYIN 75
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS++A MAIYD +Q ++ D++T+ +G +AS +++L GT GKR+A+PN+R+MIHQP
Sbjct: 76 SPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQP 135
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG GQ D+EI +EI+ + + I++ TG++ ++++ D +RD +MS +EA +YG+
Sbjct: 136 LGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGL 195
Query: 247 IDGVI 251
ID V+
Sbjct: 196 IDEVL 200
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG + D LLK+RI+FLG+ I+D VA+ I++Q+L L +DP KDI+L++NSPGGS+S
Sbjct: 25 RGERSYDIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQLYINSPGGSIS 84
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A AIYD +Q V+ D+ T+ +GM+AS + +L GTKGKR A+PN+ VMIHQP+GGA GQ
Sbjct: 85 AGFAIYDTMQHVKCDIQTICIGMAASMGAFLLSSGTKGKRLALPNSEVMIHQPLGGAQGQ 144
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ +D +++S TG+ +++Q+D DRD +MS +A +YG+ID +I+
Sbjct: 145 ASDIEISAKRILRMRDRLNQLLSDQTGQPLKKIQQDTDRDHFMSAEDAKKYGLIDKIIEH 204
>gi|452943368|ref|YP_007499533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
gi|452881786|gb|AGG14490.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
Length = 205
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 131/187 (70%), Gaps = 5/187 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG A D LL++RIV LG IDD VA+ I++QLL L+AQDP KDI++++N
Sbjct: 21 QTP----RGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYIN 76
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS++A +AIYD +Q ++ DV+T+ +G +AS +++L G KGKRFA+PN R+MIHQP
Sbjct: 77 SPGGSVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGAKGKRFALPNARIMIHQP 136
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG GQ D+ I A EI K I++ TG+S Q++KD+DRD +MS EA YG+
Sbjct: 137 LGGVQGQATDILIHAEEIKRIKHILNTILANATGKSLRQIEKDVDRDYFMSAEEAKNYGL 196
Query: 247 IDGVIDR 253
ID VI +
Sbjct: 197 IDKVITK 203
>gi|406927441|gb|EKD63473.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 205
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 135/201 (67%), Gaps = 4/201 (1%)
Query: 57 RQHDVPLSSAPQTPATAMRGAEA----DAMGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
+ +PL+S+ P + A+ D LLK+RI+FLG ID VA+ II+QLL L
Sbjct: 4 KNKHIPLTSSILVPTVLEKTAQGERSYDIYSRLLKDRIIFLGTAIDGNVANLIIAQLLFL 63
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
+ ++P KDI +++NSPGG ++A +AIYD +Q ++ DVSTV +GM+AS +++L GG KGK
Sbjct: 64 ENENPKKDITMYINSPGGHVTAGLAIYDTMQHLKCDVSTVCVGMAASMGAVLLCGGAKGK 123
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
RF++PN VMIHQP+GG GQ ++EI AR I+ K II+ +G+ V+KD DR
Sbjct: 124 RFSLPNAEVMIHQPLGGVEGQATEIEIHARHILKTKAKLNGIIAKHSGKKVADVEKDTDR 183
Query: 233 DRYMSPIEAVEYGIIDGVIDR 253
D +MS +A++YG+ID ++ +
Sbjct: 184 DNFMSAEDALKYGLIDKIVQK 204
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 134/188 (71%), Gaps = 7/188 (3%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG IDD VA++II+QLL L+A++P KDI L++NSPGG ++A MAIY
Sbjct: 21 DIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLEAENPDKDIHLYINSPGGVVTAGMAIY 80
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS AS++L G KGKRFA+P+++VMIHQP+GG GQ ++EI
Sbjct: 81 DTMQYIKPDVSTICVGSAASMASVLLTAGAKGKRFALPHSQVMIHQPLGGVQGQATEIEI 140
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 259
AREI+ + I+S TG+ + +QKD +RD +M+ EA YG+ID ++ R
Sbjct: 141 HAREILRMRKELNGILSKHTGQPIDVIQKDTERDNFMTAEEAKAYGLIDEILTR------ 194
Query: 260 VPVPEKVK 267
P+P++ K
Sbjct: 195 -PLPDETK 201
>gi|161524522|ref|YP_001579534.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|189350722|ref|YP_001946350.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|221198217|ref|ZP_03571263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|221209201|ref|ZP_03582193.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|254252156|ref|ZP_04945474.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|416986795|ref|ZP_11938505.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
gi|124894765|gb|EAY68645.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|160341951|gb|ABX15037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans ATCC 17616]
gi|189334744|dbj|BAG43814.1| ATP-dependent Clp protease [Burkholderia multivorans ATCC 17616]
gi|221170939|gb|EEE03394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|221182149|gb|EEE14550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|325518991|gb|EGC98514.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
Length = 217
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 27/212 (12%)
Query: 60 DVPLSSAPQTPATAMRGAEADAMGL--------------------LLKERIVFLGNNIDD 99
D+ S+APQ G EA A+GL LLKER+VF+ ++D
Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVND 61
Query: 100 FVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAS 159
A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS
Sbjct: 62 QTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAAS 121
Query: 160 TASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFT 219
+ +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ T
Sbjct: 122 MGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAQHT 181
Query: 220 GRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
G+ E++ +D DRD +MS +A YG+ID V+
Sbjct: 182 GQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
>gi|255657287|ref|ZP_05402696.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|296451860|ref|ZP_06893579.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879744|ref|ZP_06903718.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|296259339|gb|EFH06215.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429215|gb|EFH15088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
Length = 194
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 126/170 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+F+G I+D +A +++QLL L+++DP DI +++NSPGGS++A AIYD +
Sbjct: 24 LLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSVTAGFAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DVST+ +GM+AS ++ +L GGT GKR+A+PN +MIHQPMGGA GQ DV+I I
Sbjct: 84 VRCDVSTICIGMAASMSAFLLAGGTHGKRYALPNAEIMIHQPMGGAKGQATDVKIAVDNI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+ K+ RI S TG+S E +++D DRD +M+ +EA EYG+ID +++R+
Sbjct: 144 LKIKERLDRIFSENTGKSIEDIRRDTDRDNFMTALEAKEYGLIDYIMNRN 193
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 130/192 (67%), Gaps = 1/192 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RIVFLG IDD VA+ +I+QLL L+++DP K
Sbjct: 1 MPYIPMPYVVEQTHRGERSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS+++ +AIYD +Q V+ VST+ LG +AS + +L GG GKRFA+PN
Sbjct: 61 DISLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNA 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQPMGG GQ D++IQAREI+ K I++ T + E+++KD DRD +M
Sbjct: 121 RIMIHQPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAG 180
Query: 240 EAVEYGIIDGVI 251
EA EYG+ID VI
Sbjct: 181 EAKEYGLIDEVI 192
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG A D LL+ERIVFLG +DD +A+ I++QLL L+A+DP KDI L++
Sbjct: 3 PTVIESSGRGERAFDIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA M ++D + +R DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGMGMFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K + ++ TG+ ++++D +RD +MS E+ EYG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKQKLNQHLADHTGQPLSKIEEDTERDFFMSAEESKEYG 182
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 183 LIDQVINR 190
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|418576800|ref|ZP_13140932.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|124013830|sp|Q49VZ2.1|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|379324465|gb|EHY91611.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 194
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I++ TG+S E++++D DRD ++S EA +YG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYG 184
Query: 246 IIDGVI 251
++D V+
Sbjct: 185 LVDQVM 190
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 126/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ ++D A I++QLL L+A+DP KDI L++NSPGGS+++ MAIY
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKR A+PN+ +MIHQP+GGA GQ D+EI
Sbjct: 79 DTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+ I+ K+ I+S TG+ E+++ D +RD +MS +EA EYG+ID V +
Sbjct: 139 HAKRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEVFTK 192
>gi|53723667|ref|YP_103112.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
ATCC 23344]
gi|76808778|ref|YP_333874.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1710b]
gi|167719122|ref|ZP_02402358.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei DM98]
gi|167738116|ref|ZP_02410890.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 14]
gi|167815308|ref|ZP_02446988.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 91]
gi|167823710|ref|ZP_02455181.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 9]
gi|167845261|ref|ZP_02470769.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei B7210]
gi|167893805|ref|ZP_02481207.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 7894]
gi|167902257|ref|ZP_02489462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910496|ref|ZP_02497587.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 112]
gi|167918525|ref|ZP_02505616.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BCC215]
gi|67460238|sp|Q62JK7.1|CLPP_BURMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|92087004|sp|Q3JRC9.1|CLPP_BURP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52427090|gb|AAU47683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 23344]
gi|76578231|gb|ABA47706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710b]
Length = 207
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 133/189 (70%), Gaps = 1/189 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG + D LLKERIVF+ ++D A+ +++QLL L++++P KDI
Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDI 73
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN RV
Sbjct: 74 SLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARV 133
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ +D +++ TG+ E++ +D DRD +MS +A
Sbjct: 134 MIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDA 193
Query: 242 VEYGIIDGV 250
YG+ID V
Sbjct: 194 KAYGLIDHV 202
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
Query: 68 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNS 127
QT MR D LLK+RI+FLG+ I D A+ II+QLL LDA++P +DI L++NS
Sbjct: 10 QTGRGEMR---YDVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDIYLYLNS 66
Query: 128 PGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM 187
PGG +S+ +AIYD +Q ++ADV T+ +G ++S A+L+L GG KGKR A+P++R+M+HQP
Sbjct: 67 PGGYVSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRIMMHQPT 126
Query: 188 GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGII 247
GGA+GQ D+ IQA+E++ K + + TG+S E+VQKD +RD YM+P EA +YGII
Sbjct: 127 GGATGQASDIAIQAKEVLKLKQVLNGLYAKHTGKSVEEVQKDTERDLYMTPEEAQKYGII 186
Query: 248 DGVI 251
D VI
Sbjct: 187 DSVI 190
>gi|383758647|ref|YP_005437632.1| ATP-dependent Clp protease, protease subunit ClpP [Rubrivivax
gelatinosus IL144]
gi|381379316|dbj|BAL96133.1| ATP-dependent Clp protease, protease subunit ClpP [Rubrivivax
gelatinosus IL144]
Length = 202
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LL+ERIVFL ++D VA+ + +QLL L++++P KDI
Sbjct: 9 LGMVPMVIEQSGRGERAYDIYSRLLRERIVFLVGPVNDQVANLVCAQLLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA ++I+D + ++ +VST+ +GM+AS S +L G KGKRFA+PN+RV
Sbjct: 69 FLYINSPGGSVSAGLSIFDTMNFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNSRV 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EIQAREI+ ++ RI + TG+S E+++ D++RD ++SP EA
Sbjct: 129 MIHQPSGGAQGQASDIEIQAREIIKTREQLNRIYAERTGQSIEKIEADMERDMWLSPSEA 188
Query: 242 VEYGIIDGVIDR 253
+YG+ID V+++
Sbjct: 189 KDYGLIDQVLEK 200
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 122/172 (70%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FLG+ I+D A +++QLL L+A+DP KDI++++NSPGGS++A MAIY
Sbjct: 19 DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPGGSITAGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DVST+ +GM+AS + +L G KGKRFA+PN VMIHQP+GG GQ D+ I
Sbjct: 79 DTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGTRGQAEDIRI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A I+ +D +I+ TG+ E+VQKD DRD +M EA EYGIID VI
Sbjct: 139 HAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYGIIDEVI 190
>gi|423418841|ref|ZP_17395930.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|401105447|gb|EJQ13414.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
Length = 194
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 129/171 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+ L I D +A+ +++QLL LDA DP KDI +++NSPGGS++A +AI+D +Q+
Sbjct: 24 LLKDRIIMLTGEITDELANGVVAQLLFLDADDPEKDISIYINSPGGSITAGLAIFDTMQI 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADVST+ +GM+AS + +L GG KGKRFA+PN VMIHQP+GGA GQ D+EI A+ I
Sbjct: 84 IKADVSTLCVGMAASMGAFLLAGGEKGKRFALPNAEVMIHQPLGGARGQATDIEISAKRI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+H ++ +I+S TG++ E +Q+D +RD +M+ +A+ YG+ID ++ R S
Sbjct: 144 LHMRERLNQILSERTGQTVESLQRDTERDNFMTAEDALNYGLIDKILVRQS 194
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG IDD +++ II+QLL L+A+DP KDI L++NSPGG ++A MAIY
Sbjct: 19 DIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFLYINSPGGVVTAGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R VST+ +G +AS +++L G KGKRFA+P++R+MIHQP+GGA GQ D+EI
Sbjct: 79 DTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRIMIHQPLGGAQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
QAREI+ K+ I+ TG E++Q+D DRD +M+ +A YGIID VI S
Sbjct: 139 QAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMTGEQARAYGIIDEVIQSRS 194
>gi|221215056|ref|ZP_03588023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|421469009|ref|ZP_15917506.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans ATCC BAA-247]
gi|421479611|ref|ZP_15927294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans CF2]
gi|221164992|gb|EED97471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|400222687|gb|EJO53050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans CF2]
gi|400230734|gb|EJO60485.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans ATCC BAA-247]
Length = 208
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI
Sbjct: 15 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDI 74
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RV
Sbjct: 75 SLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRV 134
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A
Sbjct: 135 MIHQPLGGARGQASDIEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFMSSEDA 194
Query: 242 VEYGIIDGVI 251
YG+ID V+
Sbjct: 195 KAYGLIDQVL 204
>gi|107028898|ref|YP_625993.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia AU 1054]
gi|115351962|ref|YP_773801.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria AMMD]
gi|116689944|ref|YP_835567.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia HI2424]
gi|170702050|ref|ZP_02892966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|170733282|ref|YP_001765229.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia MC0-3]
gi|171320790|ref|ZP_02909797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|172060888|ref|YP_001808540.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria MC40-6]
gi|206560359|ref|YP_002231123.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|402566278|ref|YP_006615623.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cepacia GG4]
gi|421866865|ref|ZP_16298527.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia H111]
gi|116243129|sp|Q1BH85.1|CLPP_BURCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122322952|sp|Q0BEF6.1|CLPP_BURCM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201802|sp|A0K847.1|CLPP_BURCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|105898062|gb|ABF81020.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia AU 1054]
gi|115281950|gb|ABI87467.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
ambifaria AMMD]
gi|116648033|gb|ABK08674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia HI2424]
gi|169816524|gb|ACA91107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
cenocepacia MC0-3]
gi|170133036|gb|EDT01448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|171093960|gb|EDT39074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|171993405|gb|ACB64324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MC40-6]
gi|198036400|emb|CAR52296.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|358073029|emb|CCE49405.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia H111]
gi|402247475|gb|AFQ47929.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cepacia GG4]
Length = 217
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 27/212 (12%)
Query: 60 DVPLSSAPQTPATAMRGAEADAMGL--------------------LLKERIVFLGNNIDD 99
D+ S+APQ G EA A+GL LLKER+VF+ ++D
Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVND 61
Query: 100 FVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAS 159
A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS
Sbjct: 62 QTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAAS 121
Query: 160 TASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFT 219
+ +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ T
Sbjct: 122 MGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHT 181
Query: 220 GRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
G+ E++ +D DRD +MS +A YG+ID V+
Sbjct: 182 GQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
>gi|444363684|ref|ZP_21164096.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia BC7]
gi|444369902|ref|ZP_21169607.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia K56-2Valvano]
gi|443594526|gb|ELT63169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia BC7]
gi|443598384|gb|ELT66748.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia K56-2Valvano]
Length = 208
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI
Sbjct: 15 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDI 74
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+RV
Sbjct: 75 SLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRV 134
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A
Sbjct: 135 MIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDA 194
Query: 242 VEYGIIDGVI 251
YG+ID V+
Sbjct: 195 KAYGLIDQVL 204
>gi|160936367|ref|ZP_02083736.1| hypothetical protein CLOBOL_01259 [Clostridium bolteae ATCC
BAA-613]
gi|158440650|gb|EDP18388.1| hypothetical protein CLOBOL_01259 [Clostridium bolteae ATCC
BAA-613]
Length = 193
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A +++QLL L+++DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA AIYD + ++ DVST+ +GM+AS + +L GG KGKRFA+PN +
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ + I++ TG+ E +++D +RD YMS +EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNEILAANTGKPLEVIERDTERDNYMSALEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID +I
Sbjct: 181 KEYGLIDEII 190
>gi|392530253|ref|ZP_10277390.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium
maltaromaticum ATCC 35586]
Length = 198
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 132/193 (68%), Gaps = 1/193 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L IDD VA+A+I+QLL LDAQD KDI +++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGAIDDNVANAVIAQLLFLDAQDSEKDIYIYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A +AIYD + ++ADV T+A+G++AS S +L GTKGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVTAGLAIYDTMNFIKADVQTIAMGIAASMGSFLLTAGTKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ +I++ TG+ E ++KD DRD +MS EA YG
Sbjct: 125 PLGGAQGQATEIEIAARHILKTRERLNKILADQTGQPIEVIEKDTDRDNFMSADEAKAYG 184
Query: 246 IIDGVIDRDSIIP 258
+ID ++ +P
Sbjct: 185 LIDEIMVNSKSLP 197
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 133/190 (70%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+FLG IDD ++ II+QLL L+A+DP KDI L++
Sbjct: 4 PMVIESTNRGERAYDIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M IYD +Q V+ ++T+ LG +AS +L+L GT+GKR A+PN RVMIHQ
Sbjct: 64 NSPGGSVTAGMGIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRHALPNARVMIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
PMGG GQ +++I AREI+ ++ +I+S TG++ E++ +D +RD +MS EA +YG
Sbjct: 124 PMGGFQGQATEIDIHAREILKIRERLNQILSEHTGQALEKISQDTERDYFMSGTEAKDYG 183
Query: 246 IIDGVIDRDS 255
+ID VI R S
Sbjct: 184 LIDEVIVRAS 193
>gi|355676848|ref|ZP_09060344.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
citroniae WAL-17108]
gi|354813437|gb|EHE98048.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
citroniae WAL-17108]
Length = 193
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 128/192 (66%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A +++QLL L+++DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA AIYD + ++ DVST+ +GM+AS + +L GG KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ + I++ TGR E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAAEA 180
Query: 242 VEYGIIDGVIDR 253
EYG+ID +I+
Sbjct: 181 KEYGLIDEIIEH 192
>gi|209525239|ref|ZP_03273781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376006287|ref|ZP_09783579.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423065156|ref|ZP_17053946.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|209494254|gb|EDZ94567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375325348|emb|CCE19332.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406713288|gb|EKD08459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 237
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FLG IDD VA+A+ +Q+L L+++DP KDI+L++NSPGGS++A M IYD +Q
Sbjct: 56 LLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIYDTMQQ 115
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 116 IRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEIQAKEI 175
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+++K +++ TG+ E++ D +RD +MS EA EYG+ID VI + ++ PVP
Sbjct: 176 LYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDNVILKQNL----PVP 230
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
Length = 197
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 129/172 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+A+I+Q+L L+A+DP KDI L++NSPGG ++A MAIYD +Q
Sbjct: 23 LLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +++L G KGKR+A+P+ RVMIHQP+GG GQ ++EI AREI
Sbjct: 83 IKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQPLGGVQGQASEIEIHAREI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ ++ I++ +G+ E V +D DRD +MS +AVEYG+ID V+ R+ +
Sbjct: 143 LRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVLTREPV 194
>gi|365174864|ref|ZP_09362302.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
gi|363613729|gb|EHL65234.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
Length = 194
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 127/169 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +++Q+L L+++DP KDI L++NSPGGS+SA +AIYD +Q
Sbjct: 25 LLKDRIIFLGTAIDDTVANLVVAQMLFLESEDPDKDISLYINSPGGSVSAGLAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R +VST+ LGM+AS +++L G GKR A+PN ++MIHQPMGG GQ D+EI A+EI
Sbjct: 85 IRPNVSTICLGMAASMGAVLLTAGADGKRLALPNAKIMIHQPMGGMQGQASDIEIHAKEI 144
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ I++ T + ++++ D DRD YMS EA++YGI+D +I++
Sbjct: 145 LKTREKLNEILAKHTRQPLDKIEADTDRDYYMSAEEALKYGIVDKIIEK 193
>gi|336315652|ref|ZP_08570560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rheinheimera
sp. A13L]
gi|335879971|gb|EGM77862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rheinheimera
sp. A13L]
Length = 207
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++QLL L++++P KDI +++NSPGGS++A M+IY
Sbjct: 30 DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIYIYINSPGGSVTAGMSIY 89
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ +++TV +G + S + +L GGTKGKR+ +PN RVMIHQP+GG GQ D EI
Sbjct: 90 DTMKYIKPNIATVCVGQACSMGAFLLSGGTKGKRYCLPNARVMIHQPLGGFQGQATDFEI 149
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDS 255
AREI++ K+ R+++ G+++EQV KD +RD ++S +A+EYG+ID ++ RD+
Sbjct: 150 HAREILYIKEKLNRLMAEHCGKTYEQVCKDTERDNFLSAQQALEYGLIDAILTQRDA 206
>gi|134295958|ref|YP_001119693.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
vietnamiensis G4]
gi|387902477|ref|YP_006332816.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
KJ006]
gi|166201808|sp|A4JF05.1|CLPP_BURVG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134139115|gb|ABO54858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
vietnamiensis G4]
gi|387577369|gb|AFJ86085.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
KJ006]
Length = 217
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 27/212 (12%)
Query: 60 DVPLSSAPQTPATAMRGAEADAMGL--------------------LLKERIVFLGNNIDD 99
D+ S+APQ G EA A+GL LLKER+VF+ ++D
Sbjct: 9 DMLASNAPQ-------GFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVND 61
Query: 100 FVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSAS 159
A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS
Sbjct: 62 QTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAAS 121
Query: 160 TASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFT 219
+ +L G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ T
Sbjct: 122 MGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHT 181
Query: 220 GRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
G+ E++ +D DRD +MS +A YG+ID V+
Sbjct: 182 GQDVERIARDTDRDNFMSSDDAKAYGLIDQVL 213
>gi|433460812|ref|ZP_20418435.1| ATP-dependent Clp protease proteolytic subunit [Halobacillus sp.
BAB-2008]
gi|432191000|gb|ELK47985.1| ATP-dependent Clp protease proteolytic subunit [Halobacillus sp.
BAB-2008]
Length = 196
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD +A++++SQLL L A DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSPIDDNIANSVVSQLLFLAADDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ GM+AS + +L G GKR+A+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQFIKPDVSTICTGMAASMGAFLLNAGEPGKRYALPNSEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ ++ +I+S TG+ E +++D DRD +MS EAVEYG+ID V+ +
Sbjct: 133 ATDIEIHAKRIIKMREKLNQILSERTGQPIEVIERDTDRDNFMSAHEAVEYGLIDKVMTK 192
>gi|336436530|ref|ZP_08616242.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007395|gb|EGN37420.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 193
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG + D A+ I++QLL L+A DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSANIIVAQLLFLEADDPNKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A MAIYD +Q ++ DVSTV +GM+AS S +L GG KGKRFA+PN +
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGSFLLSGGAKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ + I++ TG+ E +Q+D +RD +MS +A
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKIRKKLNEILAANTGQPLEVIQRDTERDNFMSAQQA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDEVI 190
>gi|184154836|ref|YP_001843176.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
fermentum IFO 3956]
gi|227514403|ref|ZP_03944452.1| endopeptidase Clp [Lactobacillus fermentum ATCC 14931]
gi|260663135|ref|ZP_05864027.1| Clp protease [Lactobacillus fermentum 28-3-CHN]
gi|226706457|sp|B2GAL4.1|CLPP_LACF3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|183226180|dbj|BAG26696.1| endopeptidase Clp proteolytic subunit [Lactobacillus fermentum IFO
3956]
gi|227087269|gb|EEI22581.1| endopeptidase Clp [Lactobacillus fermentum ATCC 14931]
gi|260552327|gb|EEX25378.1| Clp protease [Lactobacillus fermentum 28-3-CHN]
Length = 196
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L I+D +A++I++QLL LDAQD TKDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDNMANSIVAQLLFLDAQDSTKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ MAIYD + +++DV T+ +GM+AS AS+++ GTKGKRF +P++ VMIHQ
Sbjct: 65 NSPGGVVTSGMAIYDTMNFIKSDVQTIVIGMAASMASVLVSSGTKGKRFGLPHSTVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P GGA GQ +++I A EI+ + I++ +G+SFEQV++D +RD Y++ EAV+YG
Sbjct: 125 PSGGAQGQQTEIQIAAEEILKTRKMINEILAKNSGQSFEQVEQDTERDHYLTAQEAVDYG 184
Query: 246 IIDGVIDRDSI 256
++DGV+D +++
Sbjct: 185 LLDGVMDSNNL 195
>gi|428320528|ref|YP_007118410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428244208|gb|AFZ09994.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 229
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 133/177 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG + D VAD+I++QLL LDA+DP KD+++++NSPGGS++A MAIY
Sbjct: 42 DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQMYINSPGGSVTAGMAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L G GKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 102 DTMQQIRPDVVTICYGLAASMGAFLLTAGAHGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
QA+EI+++K ++++ TG+ E+++ D +RD +MS EA YG++D VI ++++
Sbjct: 162 QAKEILYHKRKLNQLLAHHTGQPIEKLEADTERDFFMSAEEAKNYGLVDRVIAKENL 218
>gi|57234482|ref|YP_181451.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides
ethenogenes 195]
gi|270308033|ref|YP_003330091.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
sp. VS]
gi|115311355|sp|Q3Z8J8.1|CLPP_DEHE1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57224930|gb|AAW39987.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides ethenogenes 195]
gi|270153925|gb|ACZ61763.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
sp. VS]
Length = 200
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
P + P ++ RG A D LLLKERI+FLG+ I+D VA+ +I+QLL LD +DP KD
Sbjct: 4 PENVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKD 63
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
I L+++SPGG +SA +A+YD +QL+R VST+ +G++AS A+++L G KGKR+A+PN
Sbjct: 64 ISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNAT 123
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
+ +HQ MGGA GQ D+EI AREIM +D I+ TG+ E++ D DRD Y++ +
Sbjct: 124 IHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQPMEKIIHDSDRDYYLNAQQ 183
Query: 241 AVEYGIIDGVIDR 253
AVEYG+ID ++ +
Sbjct: 184 AVEYGLIDEILQK 196
>gi|229164087|ref|ZP_04292023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228619323|gb|EEK76213.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ +A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKI 189
>gi|402846810|ref|ZP_10895119.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Porphyromonas sp. oral taxon 279 str. F0450]
gi|402267502|gb|EJU16897.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Porphyromonas sp. oral taxon 279 str. F0450]
Length = 222
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 127/180 (70%)
Query: 74 MRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
M A+ D L+ +RI+FLG I+D+ A+ I +QLL LD+ +P KDI +++NSPGGS+
Sbjct: 40 MNVAQMDVFSRLMMDRIIFLGTQINDYTANVIQAQLLFLDSSEPGKDISIYINSPGGSVY 99
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A IYD +Q + DVST+ GM+AS AS++L GTKGKRFA+P++RVMIHQP+GG GQ
Sbjct: 100 AGYGIYDTMQYIGCDVSTICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQ 159
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI AREI+ K+ I+S +G+ FE +Q+D DRD +M+ EA YG++D V+ R
Sbjct: 160 ASDLEIAAREILKVKEELYTILSEHSGQPFETIQRDSDRDYWMTATEAQAYGMVDRVLTR 219
>gi|123443342|ref|YP_001007316.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420257505|ref|ZP_14760262.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|2493738|sp|Q60107.1|CLPP_YEREN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214722|sp|A1JNN2.1|CLPP_YERE8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1377852|gb|AAC45782.1| ClpP [Yersinia enterocolitica]
gi|122090303|emb|CAL13169.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404515019|gb|EKA28797.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 207
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+EI+ K +++ TG+S E++++D +RDR++S EAVEYG++D V R
Sbjct: 152 HAKEILKVKSRMNELMAKHTGKSLEEIERDTERDRFLSADEAVEYGLVDSVFTR 205
>gi|60389557|sp|Q6AK59.2|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 135/185 (72%), Gaps = 5/185 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG + D LLKERI+FLG+ ++D VA+ I++QLL L+A+DP KDI ++N
Sbjct: 10 QTP----RGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYIN 65
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS++A MAIYD +Q ++ D++T+ +G +AS +++L GT GKR+A+PN+R+MIHQP
Sbjct: 66 SPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQP 125
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG GQ D+EI +EI+ + + I++ TG++ ++++ D +RD +MS +EA +YG+
Sbjct: 126 LGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGL 185
Query: 247 IDGVI 251
ID V+
Sbjct: 186 IDEVL 190
>gi|406886285|gb|EKD33336.1| hypothetical protein ACD_76C00044G0003 [uncultured bacterium]
Length = 204
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL++RI+FLG+ IDD VA+ +I+QLL L++QD TKDI+L++NSPGGS++A +AIY
Sbjct: 32 DIYSRLLRDRIIFLGSAIDDVVANTVIAQLLFLESQDKTKDIKLYINSPGGSVTAGLAIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V DVST +G++AS ++++L G KGKRFA+PN +MIHQ +GG GQ D++I
Sbjct: 92 DAMQHVGPDVSTTCVGLAASMSAVLLAAGAKGKRFALPNAEIMIHQVLGGVQGQATDIKI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A I+ KD +IIS TG+ QV+KD DRD +M P EA +YGIID VI
Sbjct: 152 HAERILKIKDRLNQIISLHTGKPKTQVEKDTDRDYFMDPEEAKKYGIIDKVI 203
>gi|17546430|ref|NP_519832.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum GMI1000]
gi|83745913|ref|ZP_00942970.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum UW551]
gi|207743049|ref|YP_002259441.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum IPO1609]
gi|300691404|ref|YP_003752399.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum PSI07]
gi|300703972|ref|YP_003745574.1| proteolytic subunit of clpa-clpp ATP-dependent serine protease
[Ralstonia solanacearum CFBP2957]
gi|386333413|ref|YP_006029583.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum Po82]
gi|421888083|ref|ZP_16319197.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum K60-1]
gi|421898197|ref|ZP_16328564.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum MolK2]
gi|22653696|sp|Q8XYP7.1|CLPP_RALSO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|17428728|emb|CAD15413.1| probable atp-atp-dependent clp protease proteolytic subunit
(endopeptidase clp). transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|83727603|gb|EAP74724.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum UW551]
gi|206589403|emb|CAQ36365.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum MolK2]
gi|206594446|emb|CAQ61373.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum IPO1609]
gi|299066731|emb|CBJ37925.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum CMR15]
gi|299071635|emb|CBJ42959.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum CFBP2957]
gi|299078464|emb|CBJ51116.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum PSI07]
gi|334195862|gb|AEG69047.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum Po82]
gi|344167643|emb|CCA79883.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[blood disease bacterium R229]
gi|344174667|emb|CCA86475.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia syzygii R24]
gi|378966546|emb|CCF95945.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum K60-1]
Length = 217
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER++F+ ++D A+ +++QLL L++++P KDI
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +A+YD +Q V+ DVST+ +GM+AS + +L G KGKR+A+PN+R+
Sbjct: 83 SLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRI 142
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+ +++ +D DRD +MS +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQA 202
Query: 242 VEYGIIDGVIDR 253
EYG+ID V+ R
Sbjct: 203 KEYGLIDKVLAR 214
>gi|397167167|ref|ZP_10490610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
gi|396091313|gb|EJI88880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
Length = 207
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR+++ EAV+YG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLAAQEAVDYGLVDSIL 203
>gi|253579815|ref|ZP_04857083.1| clp protease [Ruminococcus sp. 5_1_39B_FAA]
gi|251848814|gb|EES76776.1| clp protease [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 122/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ++D A I+SQLL L+A+DP KDI+L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKDRIIFLGEEVNDVSAGLIVSQLLFLEAEDPGKDIQLYINSPGGSVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ LGM+AS + +L GG KGKRFA+P++ +MIHQP GGA GQ +++I A I
Sbjct: 84 IKCDVSTICLGMAASMGAFLLAGGAKGKRFALPHSTIMIHQPSGGAQGQATEIQIVADHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K +++ TG+ E V++D DRD YM+ EA YG+IDGV+
Sbjct: 144 AQTKRTLNELLAANTGQPIEVVERDTDRDNYMTAEEAKAYGLIDGVV 190
>gi|297626026|ref|YP_003687789.1| ATP-dependent Clp protease proteolytic subunit 1 [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296921791|emb|CBL56351.1| ATP-dependent Clp protease proteolytic subunit 1 (Endopeptidase Clp
1) [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 211
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 138/210 (65%), Gaps = 9/210 (4%)
Query: 63 LSSAPQTPATAMRGAEADAMGL-------LLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
++ P P+ A GA GL LL RIVFLG+ + D ++AI +Q+LLL+A+
Sbjct: 4 IAKNPVLPSLAAGGASG--FGLSDNVYQSLLANRIVFLGSEVKDENSNAICAQMLLLNAE 61
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
DP +DI L++NSPGGS+ + MAIYD +Q + DV+TVALG++AS +L GG KGKRFA
Sbjct: 62 DPHRDIYLYINSPGGSIDSGMAIYDTMQWISNDVATVALGLAASMGQFLLSGGAKGKRFA 121
Query: 176 MPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRY 235
+P+ R+++HQP GG G DV+IQA + +H K +I+G TG++ EQ++KD DRDR+
Sbjct: 122 LPHARILMHQPSGGIGGTASDVKIQAEQSIHLKHEMAALIAGHTGQTVEQIEKDSDRDRW 181
Query: 236 MSPIEAVEYGIIDGVIDRDSIIPLVPVPEK 265
+ +A+EYG ID V +R S I P +
Sbjct: 182 FTAQQALEYGFIDHVYERASKISDTDAPNQ 211
>gi|334123167|ref|ZP_08497196.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
gi|449472613|ref|XP_004153647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Cucumis sativus]
gi|333391041|gb|EGK62164.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
Length = 207
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|145342132|ref|XP_001416147.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576372|gb|ABO94440.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 124/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L+ +RI+ LG +DD + I++QLL LDA DPTKDI L+VNSPGGS++A MA++D ++
Sbjct: 65 LMSQRIIRLGGAVDDDSCNLIVAQLLWLDAADPTKDITLYVNSPGGSVTAGMAVFDTMRH 124
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R +VSTV +G++AS + +L G GKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 125 IRPNVSTVCVGLAASMGAFLLASGHPGKRYSLPNSRIMIHQPLGGAQGQAADIEIQANEI 184
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
MH+K ++ FT + E V +D DRD +MS EAVEYG+ID +I+
Sbjct: 185 MHHKSTLNGYLAEFTKKPLETVMEDTDRDFFMSAKEAVEYGLIDAIIEH 233
>gi|424780212|ref|ZP_18207092.1| ATP-dependent Clp protease proteolytic subunit [Catellicoccus
marimammalium M35/04/3]
gi|422843170|gb|EKU27611.1| ATP-dependent Clp protease proteolytic subunit [Catellicoccus
marimammalium M35/04/3]
Length = 197
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 124/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIV L ++D +A++II+QLL LDAQDP KDI L++NSPGGS+SA +AI+D +
Sbjct: 24 LLKDRIVMLSGEVNDDMANSIIAQLLFLDAQDPEKDIYLYINSPGGSVSAGLAIFDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ADV T+ LGM+AS S +L G KGKRFA+PN VMIHQP+GGA GQ +++I AR I
Sbjct: 84 VKADVQTIVLGMAASMGSFLLTAGAKGKRFALPNAEVMIHQPLGGAQGQATEIDIAARHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ ++ +I++ TG+ E++ +D +RD YM+ EA EYG++D V+
Sbjct: 144 LQTRERLNKILAERTGQPLEKINRDTERDNYMTAQEAKEYGLVDEVL 190
>gi|406935006|gb|EKD69100.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 200
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 135/187 (72%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LLK+RIVF+G++I+D+ A+ II+Q+L L+A+DP KDI +++
Sbjct: 4 PMVIETSSRGERAYDIYSRLLKDRIVFIGSDIEDYSANLIIAQMLFLEAEDPDKDINVYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AIYD + ++R +ST+ G +AS +++L GTKGKR A+ N RVMIHQ
Sbjct: 64 NSPGGVVTSGLAIYDTMNVIRPAISTICCGQAASMGAVLLAAGTKGKRLALTNARVMIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI+ K+ +I++ TG+ +E + +D +RD +MS A+EYG
Sbjct: 124 PLGGAHGQATDIEIQAKEILGIKEKLNKILANHTGQPYETICRDTERDNFMSAARALEYG 183
Query: 246 IIDGVID 252
+ID +++
Sbjct: 184 LIDRILE 190
>gi|410095933|ref|ZP_11290925.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
goldsteinii CL02T12C30]
gi|409227964|gb|EKN20859.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
goldsteinii CL02T12C30]
Length = 222
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 142/217 (65%), Gaps = 4/217 (1%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPAT----AMRGAEADAMGLLLKERIVFLGNNID 98
R+ +TK L + + ++S+ +P + A+ D L+ +RI+FLG +D
Sbjct: 5 RKYATKHLRMNSNALDSYMNITSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVD 64
Query: 99 DFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSA 158
D+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + DVST+ GM+A
Sbjct: 65 DYSANVIQAQLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFIGCDVSTICTGMAA 124
Query: 159 STASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGF 218
S A+++L GTKGKR A+P++RVMIHQP+GG GQ D+EI AREI+ K IIS
Sbjct: 125 SFAAVLLVAGTKGKRMALPHSRVMIHQPLGGVQGQASDIEITAREILKVKKELYTIISTH 184
Query: 219 TGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+G+ +E+V++D DRD +M+ EA YG++D ++ R+S
Sbjct: 185 SGKPYEEVERDSDRDYWMTAEEAKAYGMVDEILVRNS 221
>gi|254197976|ref|ZP_04904398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|169654717|gb|EDS87410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
Length = 217
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TLA Q + L P T+ RG + D LLKERIVF+ ++D A+ +++
Sbjct: 10 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G +GKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ +D +++ TG+ E++
Sbjct: 130 GARGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG+ID V
Sbjct: 190 RDTDRDNFMSSEDAKAYGLIDHV 212
>gi|337286231|ref|YP_004625704.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
gi|335359059|gb|AEH44740.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
Length = 202
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVF+G IDD +A+ +I+QLL L+A+DP +DI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLRERIVFIGAPIDDHLANLVIAQLLFLEAEDPDRDITLYINSPGGIVT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AIYD +Q ++ D+ T+ LG +AS A+++L GGTKGKR+A+P++R+M+HQP+G GQ
Sbjct: 72 SGLAIYDTMQYIKPDICTLCLGQAASMAAVLLAGGTKGKRYALPHSRIMLHQPIGSFQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
DV+IQAREI+ + I++ TG+ EQ+QKD +RD YMS EA +YG+ID ++ +
Sbjct: 132 ATDVDIQAREILRLRAMLNEILANHTGQPIEQIQKDTERDFYMSSEEAQKYGVIDKILTK 191
>gi|343520826|ref|ZP_08757795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
gi|343397784|gb|EGV10318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
Length = 192
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 128/173 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +AD I++QLL L+++DP KDI++++NSPGGS+SA +AIY
Sbjct: 19 DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPGGSVSAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRFA+PN +MIHQP+GGA GQ D+ I
Sbjct: 79 DTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGAQGQAEDIRI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
QA++I+ + I++ TG+S ++++KD DRD YM+ EA EYGIID VI+
Sbjct: 139 QAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMTAHEAKEYGIIDEVIE 191
>gi|336449969|ref|ZP_08620426.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
gi|336283126|gb|EGN76333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
Length = 211
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 125/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKE I+FL +++ +A+ I++Q+L L++++P KDI L++NSPGGS++A MAIYD +Q
Sbjct: 33 LLKEGIIFLVGPVEEQMANLIVAQMLFLESENPEKDIYLYINSPGGSVTAGMAIYDTMQF 92
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVST+ +G +AS + +L GG KGKRF +PN+RVMIHQP+GG GQ D+EI AREI
Sbjct: 93 IRNDVSTICIGQAASMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAREI 152
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
M+ KD RI++ TG+ E+V D DRD +MS ++V YGI+D V+
Sbjct: 153 MYIKDKLNRILAEHTGQDIERVANDTDRDNFMSSEQSVAYGIVDEVL 199
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++QLL L+A+DP KDI L++NSPGG ++A +AIY
Sbjct: 19 DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++I
Sbjct: 79 DTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI+ K+ TR ++ +G+ FE+V D +RD +MS EA+EYG+ID V+
Sbjct: 139 QAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAQEAMEYGLIDKVL 190
>gi|376004076|ref|ZP_09781843.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|375327546|emb|CCE17596.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FLG IDD VA+A+ +Q+L L+++DP KDI+L++NSPGGS++A M IYD +Q
Sbjct: 19 LLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIYDTMQQ 78
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 79 IRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEIQAKEI 138
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+++K +++ TG+ E++ D +RD +MS EA EYG+ID VI + ++ PVP
Sbjct: 139 LYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDNVILKQNL----PVP 193
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RIVF+G IDD +A+ +I+QLL L+++DP KDI
Sbjct: 1 MSFVPIVVEQSNRGERAYDIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A +AIYD +Q ++ DVST+ LG++AS A+++L G KGKR+A+P RV
Sbjct: 61 HLYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGLAASMAAILLTAGAKGKRYALPYARV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EI AREI+ ++ I++ +G+ E+VQ+D++RD +MS EA
Sbjct: 121 MIHQPHGGAQGQATDIEIHAREILRLREIGADILARHSGQPVEKVQRDLERDFFMSGQEA 180
Query: 242 VEYGIIDGVIDR 253
EYG+ID V+ R
Sbjct: 181 KEYGLIDSVLAR 192
>gi|412990319|emb|CCO19637.1| ATP-dependent Clp protease proteolytic subunit [Bathycoccus
prasinos]
Length = 270
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 124/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L+ +RI+ LG +DD + I++QLL LD+ DP KDI L++NSPGGS++A MA++D ++
Sbjct: 84 LMTQRIIRLGGAVDDDSCNLIVAQLLWLDSIDPKKDITLYINSPGGSVTAGMAVFDTMRH 143
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L G KGKRF++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 144 IRPDVSTVCVGLAASMGAFLLASGQKGKRFSLPNSRIMIHQPLGGAQGQAADIEIQANEI 203
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
MH+K ++ FT + E+V +D DRD +MS +AV YG+ID +ID
Sbjct: 204 MHHKSTLNGYLAEFTNKPLEKVMEDTDRDFFMSAADAVSYGLIDAIIDH 252
>gi|423118963|ref|ZP_17106647.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5246]
gi|376399609|gb|EHT12223.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5246]
Length = 207
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S Q++ D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLAQIENDTERDRFLSASEAVEYGLVDSIL 203
>gi|358062799|ref|ZP_09149437.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
hathewayi WAL-18680]
gi|356698982|gb|EHI60504.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
hathewayi WAL-18680]
Length = 193
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG + D LLK+RI+FLG + D A +++QLL L+++DP+KDI
Sbjct: 1 MSLVPYVIESTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASLVVAQLLFLESEDPSKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AIYD + ++ DVSTV +GM+AS + +L GGTKGKRFA+PN +
Sbjct: 61 NLYINSPGGSVSAGLAIYDTMNYIKCDVSTVCMGMAASMGAFLLAGGTKGKRFALPNADI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A +I+ K I++ TG+ E +++D DRD YM+ EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVAEKILATKKKLNEILAANTGQPIEVIERDTDRDNYMTAEEA 180
Query: 242 VEYGIIDGVI 251
YG+ID VI
Sbjct: 181 KAYGLIDAVI 190
>gi|340383776|ref|XP_003390392.1| PREDICTED: trigger factor-like [Amphimedon queenslandica]
Length = 661
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P + RG A D LLKER+VFL IDD V++ I++QLL L++++P KDI
Sbjct: 459 LNLVPMVIEHSARGERAFDIYSRLLKERVVFLCGGIDDLVSNVIVAQLLFLESENPDKDI 518
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A +AIYD +Q ++ VST+ +G +AS SL+L GG GKR+ +P++ +
Sbjct: 519 HLYINSPGGHVTAGLAIYDTMQFIKPAVSTMCIGQAASMGSLLLAGGAPGKRYCLPHSCM 578
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D++I AREI+ ++ I+S TG+S E++++D DRDR+M EA
Sbjct: 579 MIHQPLGGFQGQASDIDIHAREILRTRERLDNILSIHTGQSIERIREDTDRDRFMHAAEA 638
Query: 242 VEYGIIDGVIDR 253
EYG+ID V++R
Sbjct: 639 KEYGLIDDVLER 650
>gi|383935029|ref|ZP_09988467.1| ATP-dependent Clp protease, protease subunit [Rheinheimera
nanhaiensis E407-8]
gi|383703794|dbj|GAB58558.1| ATP-dependent Clp protease, protease subunit [Rheinheimera
nanhaiensis E407-8]
Length = 207
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 131/177 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++QLL L++++P KDI +++NSPGGS++A ++IY
Sbjct: 30 DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIYIYINSPGGSVTAGLSIY 89
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ D++TV +G +AS + +L GGTKGKR+ +PN RVMIHQP+GG GQ D EI
Sbjct: 90 DTMRYIKPDIATVCVGQAASMGAFLLSGGTKGKRYCLPNARVMIHQPLGGFQGQATDFEI 149
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
AREI+ K+ R+++ +G+S+EQV KD +RD ++S +A+EYG++D ++ + +
Sbjct: 150 HAREILSIKEKLNRLMAEHSGKSYEQVCKDTERDNFLSAQQALEYGLVDAILTQREV 206
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ ++D A I++QLL L+A+DP KDI L++NSPGGS+++ MAIY
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKR A+PN+ +MIHQP+GGA GQ D+EI
Sbjct: 79 DTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+ I+ K+ I S TG+ E+++ D +RD +MS +EA EYG+ID V +
Sbjct: 139 HAKRILKIKETLNEIFSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEVFTK 192
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Query: 65 SAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRL 123
+ P T RG A D LLK+RI+ LG ++D VA+ I++QLL L+++DP K I L
Sbjct: 2 NVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINL 61
Query: 124 FVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMI 183
++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +L+L G KGKR+A+PN+R+MI
Sbjct: 62 YINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMI 121
Query: 184 HQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVE 243
HQP+GGA GQ D++IQA+EI+ + +I TG + E+++KD +RD +MS +A +
Sbjct: 122 HQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQ 181
Query: 244 YGIIDGVIDRDSIIPLVPVPEK 265
YG+ID V+++ +I P P K
Sbjct: 182 YGLIDEVVEKQRVIAPTPAPAK 203
>gi|209521458|ref|ZP_03270166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209498114|gb|EDZ98261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 217
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TL Q + L P T+ RG + D LLKERIVFL ++D A+ +++
Sbjct: 10 TLTSQSSRDLETQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
Q+L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 70 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG++D V
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQV 212
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1.1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 137/198 (69%), Gaps = 2/198 (1%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LL++RI+FLG I D VA+ II+QLL L+++DP KDI
Sbjct: 1 MSLIPIVVEQSSRGERAFDIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGG ++A +AIYD +Q ++ +VST+ +G +AS A+++L G KGKR+A+P+ R+
Sbjct: 61 HFYINSPGGLVTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
M+HQPMGG GQ DVEIQA+EI+ ++ I+ TGR EQ+Q+D DRD YMS +A
Sbjct: 121 MLHQPMGGFQGQATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQA 180
Query: 242 VEYGIIDGVI-DRDSIIP 258
EYG++D + R SI+P
Sbjct: 181 REYGMVDHIFTSRLSILP 198
>gi|409993296|ref|ZP_11276442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|409935831|gb|EKN77349.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 237
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FLG IDD VA+A+ +Q+L L+++DP KDI+L++NSPGGS++A M IYD +Q
Sbjct: 56 LLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIYDTMQQ 115
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 116 IRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEIQAKEI 175
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+++K +++ TG+ E++ D +RD +MS EA EYG+ID VI + ++ PVP
Sbjct: 176 LYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDQVILKQNL----PVP 230
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LLKERI+FLG IDD VA+ I++Q+L L+++DP KDI L++
Sbjct: 6 PMVVETSGRGERAYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYI 65
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG ++A +AIYD +Q ++ DVST+ +G +AS S++L G KGKR+A+P+ R+MIHQ
Sbjct: 66 NSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 125
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++IQA+EI+ ++ I++ TG+ E++ D +RD +MS EA EYG
Sbjct: 126 PLGGAQGQSTDIQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEEAKEYG 185
Query: 246 IIDGVIDR 253
+ID V+ R
Sbjct: 186 LIDEVVLR 193
>gi|397613755|gb|EJK62404.1| hypothetical protein THAOC_16984 [Thalassiosira oceanica]
Length = 289
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 136/181 (75%), Gaps = 1/181 (0%)
Query: 76 GAE-ADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSA 134
GAE D L +ERI+FLG+ IDD +A+ II +L LD +D +K I L++NSPGGS+ A
Sbjct: 76 GAEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDSSKPIYLYINSPGGSVIA 135
Query: 135 TMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQV 194
+AI+D +QL++++V T+ LG++AS AS IL G+KGKR A+P++R+MIHQPMGGA GQ
Sbjct: 136 GLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLALPSSRIMIHQPMGGAQGQA 195
Query: 195 LDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
D++++A +IM +DN ++ S FTG++ +Q+ KD+DRD +MS A+EYG+ID V++R
Sbjct: 196 QDIKVEAAQIMRIRDNLVKMYSMFTGQTTDQITKDLDRDNFMSAQTALEYGLIDRVLERP 255
Query: 255 S 255
S
Sbjct: 256 S 256
>gi|387890168|ref|YP_006320466.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|414595522|ref|ZP_11445141.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
gi|386925001|gb|AFJ47955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|403193485|dbj|GAB82793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
Length = 207
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 126/176 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
A+EI+ K +++ TG+ EQ++ D +RDR++S EAVEYG++D ++ S
Sbjct: 152 HAKEILKVKARMNELMAKHTGKPLEQIENDTERDRFLSASEAVEYGLVDSILTHRS 207
>gi|339442436|ref|YP_004708441.1| hypothetical protein CXIVA_13730 [Clostridium sp. SY8519]
gi|338901837|dbj|BAK47339.1| hypothetical protein CXIVA_13730 [Clostridium sp. SY8519]
Length = 194
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 119/167 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG + D A I+SQLL L+++DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKDRIIFLGEEVTDASASIIVSQLLFLESEDPGKDISLYINSPGGSVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L GG KGKRFA+PN +MIHQP GGA GQ +++I A I
Sbjct: 84 IKCDVSTICMGMAASMGAFLLAGGAKGKRFALPNAEIMIHQPSGGARGQATEIQIVAENI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I+S TG+S+E + D +RD YMS EA YG+ID VI
Sbjct: 144 LKIKKKLNTILSENTGQSYETIAADTERDNYMSAEEAQAYGLIDAVI 190
>gi|56964790|ref|YP_176521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
gi|67460456|sp|Q5WDK0.1|CLPP2_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|56911033|dbj|BAD65560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
Length = 195
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ +DD VA++I++Q+L L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKR A+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPLGGMQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
D+EI AR I+ ++ +I++ +G+ +E++ +D DRD +M+ +A EYG+ID VI+
Sbjct: 133 AADMEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAKEYGLIDKVIE 191
>gi|159465361|ref|XP_001690891.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158279577|gb|EDP05337.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 256
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 128/173 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L ++RIV LG +DD +A+ +++QLL LD+ D +DI ++VNSPGGS++A MA++D ++
Sbjct: 75 LFQQRIVRLGGAVDDDMANLLVAQLLYLDSVDNKRDITMYVNSPGGSVTAGMAVFDTMRH 134
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVST +G++AS + IL G GKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 135 IRPDVSTCCIGLAASMGAFILASGQAGKRYSLPNSRIMIHQPLGGAQGQATDIEIQANEI 194
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
+H+K ++ FTG+S E + KD DRD +MSP EA+EYG++D +I + ++
Sbjct: 195 LHHKLTLNGYLAQFTGQSMETITKDTDRDFFMSPQEAIEYGLVDAIISKPQML 247
>gi|229014309|ref|ZP_04171428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|229099577|ref|ZP_04230505.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229105752|ref|ZP_04236381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229118641|ref|ZP_04247993.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|407707620|ref|YP_006831205.1| proton-translocating NADH-quinone oxidoreductase subunit L
[Bacillus thuringiensis MC28]
gi|423377055|ref|ZP_17354339.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1O-2]
gi|423440156|ref|ZP_17417062.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X2-1]
gi|423449686|ref|ZP_17426565.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5O-1]
gi|423463229|ref|ZP_17439997.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-1]
gi|423471294|ref|ZP_17448038.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-2]
gi|423490288|ref|ZP_17466970.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BtB2-4]
gi|423496012|ref|ZP_17472656.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER057]
gi|423497194|ref|ZP_17473811.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER074]
gi|423521016|ref|ZP_17497489.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA4-10]
gi|423532582|ref|ZP_17509000.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB2-9]
gi|423542155|ref|ZP_17518545.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB4-10]
gi|423548388|ref|ZP_17524746.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB5-5]
gi|423597605|ref|ZP_17573605.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD078]
gi|423613267|ref|ZP_17589127.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD107]
gi|423619156|ref|ZP_17594989.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD115]
gi|423621820|ref|ZP_17597598.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD148]
gi|423660050|ref|ZP_17635219.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM022]
gi|228664833|gb|EEL20323.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228677641|gb|EEL31889.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228683873|gb|EEL37823.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228746909|gb|EEL96793.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|401127967|gb|EJQ35674.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5O-1]
gi|401149848|gb|EJQ57315.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER057]
gi|401162914|gb|EJQ70267.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER074]
gi|401169492|gb|EJQ76738.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB4-10]
gi|401176062|gb|EJQ83260.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB5-5]
gi|401180113|gb|EJQ87276.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA4-10]
gi|401239137|gb|EJR45569.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD078]
gi|401242429|gb|EJR48804.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD107]
gi|401251869|gb|EJR58139.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD115]
gi|401262849|gb|EJR68986.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD148]
gi|401303711|gb|EJS09272.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM022]
gi|401639657|gb|EJS57394.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1O-2]
gi|402419927|gb|EJV52199.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X2-1]
gi|402422100|gb|EJV54342.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-1]
gi|402429967|gb|EJV62049.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BtB2-4]
gi|402432774|gb|EJV64830.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-2]
gi|402464836|gb|EJV96524.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB2-9]
gi|407385305|gb|AFU15806.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis MC28]
Length = 193
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERALEYGLIDKI 189
>gi|423557331|ref|ZP_17533634.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MC67]
gi|401193139|gb|EJR00146.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MC67]
Length = 193
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERALEYGLIDKI 189
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIVFLG+ IDD VA+ II+Q L L+A+DP KDI ++NSPGGS+S
Sbjct: 17 RGERAYDIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHFYINSPGGSIS 76
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAI+D +Q +R DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GG GQ
Sbjct: 77 AGMAIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGTQGQ 136
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
D+EI AR I++ K +I++ TG+ E +++D++RD +M+ EA YGIID +
Sbjct: 137 ATDIEIHARRIVNLKKRLNQILAERTGQKLEVIERDVERDFFMTAEEAKAYGIIDDI 193
>gi|242240292|ref|YP_002988473.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dickeya
dadantii Ech703]
gi|242132349|gb|ACS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech703]
Length = 207
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 138/200 (69%), Gaps = 4/200 (2%)
Query: 53 QQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLL 111
Q++Q H ++ P RG + D LLKER++FL ++D++A+ I++Q+L
Sbjct: 7 QEKQTPH---MALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLF 63
Query: 112 LDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKG 171
L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS + +L G KG
Sbjct: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123
Query: 172 KRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDID 231
KRF +PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+S + +++D +
Sbjct: 124 KRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQSLDIIERDTE 183
Query: 232 RDRYMSPIEAVEYGIIDGVI 251
RDR++S EAVEYG++D V+
Sbjct: 184 RDRFLSAGEAVEYGLVDSVL 203
>gi|42784300|ref|NP_981547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10987]
gi|402554765|ref|YP_006596036.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
FRI-35]
gi|67460499|sp|Q72XW9.1|CLPP2_BACC1 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|42740231|gb|AAS44155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
gi|401795975|gb|AFQ09834.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
FRI-35]
Length = 193
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPDKDIHLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ +A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKI 189
>gi|88800033|ref|ZP_01115603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea
blandensis MED297]
gi|88777159|gb|EAR08364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea
blandensis MED297]
Length = 209
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKE ++FL ++D++A+ +++QLL L++++P KDI L++NSPGGS++A MAIYD +Q
Sbjct: 40 LLKENVIFLVGQVEDYMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGMAIYDTMQF 99
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +L+L GG KGKR+ +PN+R+MIHQP+GG GQ D+EI AREI
Sbjct: 100 IKPDVSTMCIGQAASMGALLLTGGAKGKRYCLPNSRMMIHQPLGGYQGQATDIEIHAREI 159
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I++ TGR E V++D DRD +M+ +AV+YG++D VI
Sbjct: 160 LEMKRRLNEIMAHHTGRPLEDVERDTDRDNFMTAEQAVDYGLVDQVI 206
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Query: 65 SAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRL 123
+ P T RG A D LLK+RI+ LG ++D VA+ I++QLL L+++DP K I L
Sbjct: 2 NVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINL 61
Query: 124 FVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMI 183
++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +L+L G KGKR+A+PN+R+MI
Sbjct: 62 YINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMI 121
Query: 184 HQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVE 243
HQP+GGA GQ D++IQA+EI+ + +I TG + E+++KD +RD +MS +A +
Sbjct: 122 HQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTVERIEKDTERDYFMSAEDARQ 181
Query: 244 YGIIDGVIDRDSIIPLVPVPEK 265
YG+ID V+++ +I P P K
Sbjct: 182 YGLIDEVVEKQRVITPTPAPAK 203
>gi|295676517|ref|YP_003605041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295436360|gb|ADG15530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 217
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TL Q + L P T+ RG + D LLKERIVFL ++D A+ +++
Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
Q+L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 70 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG++D V
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQV 212
>gi|434393622|ref|YP_007128569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265463|gb|AFZ31409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 202
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 131/183 (71%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG ID +A+ I++QLL LDA+D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQIDSNLANLIVAQLLFLDAEDSEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R DV T+ G++AS + +L GTKGKR ++PN R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNARIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ T + E++++D +RD +MSP EA +YG+ID VI+R
Sbjct: 131 ATDIEIQAKEILYHKRRLNEYLAAHTDQPIERIEQDTERDFFMSPDEAKDYGLIDQVINR 190
Query: 254 DSI 256
++
Sbjct: 191 SAV 193
>gi|291569895|dbj|BAI92167.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 236
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FLG IDD VA+A+ +Q+L L+++DP KDI+L++NSPGGS++A M IYD +Q
Sbjct: 55 LLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIYDTMQQ 114
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DV T+ G++AS + +L GT GKR ++P++R+MIHQP+GGA GQ +D+EIQA+EI
Sbjct: 115 IRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEIQAKEI 174
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+++K +++ TG+ E++ D +RD +MS EA EYG+ID VI + ++ PVP
Sbjct: 175 LYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDQVILKQNL----PVP 229
>gi|297583414|ref|YP_003699194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
selenitireducens MLS10]
gi|297141871|gb|ADH98628.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
selenitireducens MLS10]
Length = 197
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG IDD VA++I++QLL L A DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGTPIDDNVANSIVAQLLFLAADDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ V T+ +GM+AS + +L G GKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVQTICIGMAASMGAFLLTAGEPGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ K+ +I++ TG+ EQ++KD DRD ++S +A EYG+ID V+D+
Sbjct: 133 ASDIEIHAKRIVEMKEKLNQILAERTGQDIEQIRKDTDRDNFLSAAQAKEYGLIDEVMDK 192
>gi|269837422|ref|YP_003319650.1| endopeptidase Clp [Sphaerobacter thermophilus DSM 20745]
gi|269786685|gb|ACZ38828.1| Endopeptidase Clp [Sphaerobacter thermophilus DSM 20745]
Length = 209
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 62 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
P + P T RG A D LL++RI+FLG +DD +A+AII+Q++ L+ ++P +D
Sbjct: 9 PEALIPMVVETTNRGERAYDIYSRLLRDRIIFLGTPVDDQIANAIIAQMIFLEYENPEQD 68
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
I+L++NSPGG + A +AIYD +Q++R DV+T +G+ AS A+++L GTKGKRFA+PN+R
Sbjct: 69 IKLYINSPGGLVYAGLAIYDTMQMIRCDVATYCIGLGASMAAVLLAAGTKGKRFALPNSR 128
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
++IHQ G G V D+EIQARE ++ T I++ TG+SFE+V++D +RD +MS E
Sbjct: 129 ILIHQGSSGFRGSVPDIEIQARETINLTTKMTEIMAYHTGQSFERVKRDTERDYFMSAQE 188
Query: 241 AVEYGIIDGVID 252
A EYGI+D V++
Sbjct: 189 AKEYGIVDHVLE 200
>gi|358637944|dbj|BAL25241.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. KH32C]
Length = 212
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 135/204 (66%), Gaps = 1/204 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
+A Q V L P + RG A D LLKER+VFL ++D A+ I++
Sbjct: 3 NVAPQSGSNWDPVGLGMVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLIVA 62
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI ++NSPGGS+SA MAIYD +Q V+ DVST+ +G +AS S +L
Sbjct: 63 QLLFLESENPDKDIFFYINSPGGSVSAGMAIYDTMQFVKPDVSTLCIGQAASMGSFLLAA 122
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRF +PN+RVMIHQP+GG GQ D+EI AREI++ + +++ TG+ E+++
Sbjct: 123 GAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAREILNIRARLNEMLAKHTGQPVERIE 182
Query: 228 KDIDRDRYMSPIEAVEYGIIDGVI 251
KD DRD +MS +A+EYGI+D V+
Sbjct: 183 KDTDRDNFMSAKDALEYGIVDKVL 206
>gi|319941575|ref|ZP_08015901.1| ATP-dependent Clp protease proteolytic subunit [Sutterella
wadsworthensis 3_1_45B]
gi|319804945|gb|EFW01787.1| ATP-dependent Clp protease proteolytic subunit [Sutterella
wadsworthensis 3_1_45B]
Length = 196
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 129/167 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL++RI+FL ++D A I++QLL L+++DP KDI L++NSPGGS+SA M+I+D ++
Sbjct: 24 LLRDRIIFLTTEVNDQTASLIVAQLLFLESEDPDKDISLYINSPGGSVSAGMSIFDTMRF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R V+T+ LGM+AS + +L G KGKR+A+P++R+MIHQP+GGA GQ DVEI+AR++
Sbjct: 84 IRPKVNTICLGMAASMGAFLLAAGEKGKRYALPHSRIMIHQPLGGAEGQASDVEIRARQL 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K +++GFTGRS++++ +D DRD +MS EA+EYG+ID V+
Sbjct: 144 LLIKRQMNELMAGFTGRSYDELVRDTDRDNFMSAQEALEYGLIDRVL 190
>gi|81428144|ref|YP_395143.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus sakei
subsp. sakei 23K]
gi|354807170|ref|ZP_09040644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
curvatus CRL 705]
gi|90101409|sp|Q38Y96.1|CLPP_LACSS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78609785|emb|CAI54831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
sakei subsp. sakei 23K]
gi|354514330|gb|EHE86303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
curvatus CRL 705]
Length = 194
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L ++D +A+ II+QLL LDAQD KDI +++NSPGGS++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEVNDQMANTIIAQLLFLDAQDSDKDISIYINSPGGSVT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AI D + +++DV T+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQP+GGA GQ
Sbjct: 72 AGLAIMDTMNFIKSDVQTIAMGMAASMASVLLSAGTKGKRFALPNSTVLIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AREI+ + +I++ +G++FE++Q D DRD YM+ EA +YG+ID ++
Sbjct: 132 QTEIEIAAREILKTRKRLNQILADNSGQTFEKLQADTDRDNYMTAQEAKDYGLIDDIM 189
>gi|377576799|ref|ZP_09805783.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
gi|377542831|dbj|GAB50948.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
Length = 207
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+ EQ+++D +RDR++S +AVEYG++D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSADQAVEYGLVDSIL 203
>gi|238764860|ref|ZP_04625801.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
gi|238696967|gb|EEP89743.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
Length = 207
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+ K +++ TG+S E++++D +RDR++S +AVEYG++D V R
Sbjct: 152 HAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEQAVEYGLVDSVFTR 205
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D + LLK+RIV LG IDD VA+ I++QLL L+++DP K
Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +++L G KGKR+A+P++
Sbjct: 61 DINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GG GQ D+EIQA+EI+ K +I TG+S E+V+KD DRD +M
Sbjct: 121 RIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGAS 180
Query: 240 EAVEYGIIDGVIDRDSIIPL 259
EA YGIID + + ++ L
Sbjct: 181 EAKAYGIIDEIQNPRKVVGL 200
>gi|291288695|ref|YP_003505511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
gi|290885855|gb|ADD69555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
Length = 195
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ ++ +A++I++Q+L L++ DP KDI L++NSPGGS+S +AI+
Sbjct: 20 DIYSRLLKDRIIFLGSQVESGIANSIVAQMLFLESDDPDKDIHLYINSPGGSVSDGLAIF 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G +AS A+++L GTKGKR+A+PN RVMIHQ MGGA GQ D+EI
Sbjct: 80 DTMKYIKPDVSTICIGQAASMAAVLLAAGTKGKRYAVPNARVMIHQVMGGAQGQAADIEI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI+ K I++ TG+S+E+++KD DRD +MS EA YGIID VI
Sbjct: 140 QAKEILRIKKILNDILTDATGKSYEKIEKDSDRDYFMSAPEAKAYGIIDDVI 191
>gi|357052921|ref|ZP_09114025.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
clostridioforme 2_1_49FAA]
gi|355386346|gb|EHG33386.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
clostridioforme 2_1_49FAA]
Length = 193
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG + D A +++QLL L+++DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVSDVSASLVVAQLLFLESEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA AIYD + ++ DVST+ +GM+AS + +L GG KGKRFA+PN +
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ + I++ TG+ E +++D +RD YMS +EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNEILAANTGKPLEVIERDTERDNYMSALEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID +I
Sbjct: 181 KEYGLIDEII 190
>gi|212709197|ref|ZP_03317325.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|422019641|ref|ZP_16366184.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
gi|212688109|gb|EEB47637.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|414102747|gb|EKT64337.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
Length = 206
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 133/196 (67%), Gaps = 1/196 (0%)
Query: 56 QRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
Q Q ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+A
Sbjct: 7 QEQLASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI+L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIQLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++ +D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAQHTGKSIEEISRDTERDR 186
Query: 235 YMSPIEAVEYGIIDGV 250
++S EA EYG++D +
Sbjct: 187 FLSANEAKEYGLVDHI 202
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D A +++QLL L+A+DP KDI
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+ I A I+ KD +I+S TG+ E ++KD++RD +M EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDDVI 190
>gi|154482729|ref|ZP_02025177.1| hypothetical protein EUBVEN_00406 [Eubacterium ventriosum ATCC
27560]
gi|149736324|gb|EDM52210.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium ventriosum ATCC 27560]
Length = 193
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 121/167 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG I+D VA +++QLL L+++DP KDI +++NSPGGS++A MAIYD +
Sbjct: 24 LLKDRIIFLGEEINDAVASTVVAQLLFLESEDPGKDIHMYINSPGGSVTAGMAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ DVST +GM+AS + +L G KGKR+A+PN VMIHQP+GGA GQ +++I A I
Sbjct: 84 VKCDVSTTCIGMAASMGAFLLSSGAKGKRYALPNAEVMIHQPLGGAQGQATEIQIAAEHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K +I++ G+ E+V+KD DRD ++S EA EYG+ID VI
Sbjct: 144 LKTKKKLNQILADNAGKPVEEVEKDTDRDNWLSADEAKEYGLIDEVI 190
>gi|307129927|ref|YP_003881943.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
gi|306527456|gb|ADM97386.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
Length = 207
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 137/200 (68%), Gaps = 4/200 (2%)
Query: 53 QQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLL 111
Q++Q H ++ P RG + D LLKER++FL ++D +A+ I++Q+L
Sbjct: 7 QEKQAPH---MALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63
Query: 112 LDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKG 171
L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS + +L GTKG
Sbjct: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKG 123
Query: 172 KRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDID 231
KRF +PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+ E +++D +
Sbjct: 124 KRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEAIERDTE 183
Query: 232 RDRYMSPIEAVEYGIIDGVI 251
RDR++S EAV+YG++D V+
Sbjct: 184 RDRFLSAAEAVDYGLVDSVL 203
>gi|260102504|ref|ZP_05752741.1| ATP-dependent Clp protease [Lactobacillus helveticus DSM 20075]
gi|417020696|ref|ZP_11947332.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus MTCC 5463]
gi|112148370|gb|ABI13539.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus CNRZ32]
gi|260083687|gb|EEW67807.1| ATP-dependent Clp protease [Lactobacillus helveticus DSM 20075]
gi|328461831|gb|EGF34057.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus MTCC 5463]
Length = 194
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AI D + +++DVST+A+GM+AS AS+IL GTKGKRFA+PN+ V+IHQP+GGA GQ
Sbjct: 72 SGLAIMDTMNFIKSDVSTIAIGMAASMASIILTSGTKGKRFALPNSTVLIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D++I A EI+ ++ I+ TG+ E++QKD +RD Y++ EA EYG+ID ++
Sbjct: 132 QTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYGLIDEIM 189
>gi|397679092|ref|YP_006520627.1| ATP-dependent Clp protease proteolytic subunit 2 [Mycobacterium
massiliense str. GO 06]
gi|414580569|ref|ZP_11437709.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-1215]
gi|420863540|ref|ZP_15326933.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0303]
gi|420867939|ref|ZP_15331323.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0726-RA]
gi|420872370|ref|ZP_15335750.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0726-RB]
gi|420877078|ref|ZP_15340448.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0304]
gi|420882260|ref|ZP_15345624.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0421]
gi|420888591|ref|ZP_15351944.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0422]
gi|420893577|ref|ZP_15356919.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0708]
gi|420898344|ref|ZP_15361680.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0817]
gi|420904340|ref|ZP_15367660.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-1212]
gi|420909154|ref|ZP_15372467.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0125-R]
gi|420915538|ref|ZP_15378843.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0125-S]
gi|420919925|ref|ZP_15383223.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0728-S]
gi|420926425|ref|ZP_15389710.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-1108]
gi|420930730|ref|ZP_15394006.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-151-0930]
gi|420939151|ref|ZP_15402420.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-152-0914]
gi|420946178|ref|ZP_15409431.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-154-0310]
gi|420951242|ref|ZP_15414488.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0626]
gi|420955414|ref|ZP_15418653.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0107]
gi|420960912|ref|ZP_15424140.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-1231]
gi|420965987|ref|ZP_15429198.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0810-R]
gi|420971052|ref|ZP_15434248.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0921]
gi|420976770|ref|ZP_15439952.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0212]
gi|420982151|ref|ZP_15445321.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0728-R]
gi|420997219|ref|ZP_15460359.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0912-R]
gi|421001651|ref|ZP_15464781.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0912-S]
gi|421012163|ref|ZP_15475254.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0122-R]
gi|421028266|ref|ZP_15491301.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0930-R]
gi|421034064|ref|ZP_15497086.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0930-S]
gi|421042729|ref|ZP_15505733.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0116-S]
gi|421048423|ref|ZP_15511419.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|392071632|gb|EIT97474.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0726-RA]
gi|392074060|gb|EIT99898.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0303]
gi|392076559|gb|EIU02392.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0726-RB]
gi|392089699|gb|EIU15516.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0304]
gi|392091315|gb|EIU17126.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0421]
gi|392092205|gb|EIU18014.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0422]
gi|392102167|gb|EIU27954.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0708]
gi|392107585|gb|EIU33367.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0817]
gi|392108164|gb|EIU33945.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-1212]
gi|392115721|gb|EIU41489.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-1215]
gi|392121528|gb|EIU47293.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0125-R]
gi|392123222|gb|EIU48984.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0125-S]
gi|392133930|gb|EIU59672.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0728-S]
gi|392138833|gb|EIU64566.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-1108]
gi|392139748|gb|EIU65480.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-151-0930]
gi|392144666|gb|EIU70391.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-152-0914]
gi|392159386|gb|EIU85082.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-154-0310]
gi|392161019|gb|EIU86710.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0626]
gi|392171029|gb|EIU96706.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0212]
gi|392171459|gb|EIU97135.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 5S-0921]
gi|392174169|gb|EIU99835.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 6G-0728-R]
gi|392189463|gb|EIV15097.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0912-R]
gi|392200469|gb|EIV26075.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0912-S]
gi|392208315|gb|EIV33890.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0122-R]
gi|392230605|gb|EIV56115.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0930-S]
gi|392230831|gb|EIV56340.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0930-R]
gi|392241312|gb|EIV66801.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0116-S]
gi|392242588|gb|EIV68075.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense CCUG 48898]
gi|392253977|gb|EIV79444.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-1231]
gi|392255942|gb|EIV81403.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0107]
gi|392256589|gb|EIV82045.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0810-R]
gi|395457357|gb|AFN63020.1| ATP-dependent Clp protease proteolytic subunit 2 [Mycobacterium
massiliense str. GO 06]
Length = 200
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 125/172 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL ERI+FLG +DD +A+ + +Q+LLL A+DPTKDI L++NSPGGS+SA MAI+D +QL
Sbjct: 21 LLSERIIFLGQQVDDDIANKLCAQILLLTAEDPTKDIHLYINSPGGSISAGMAIFDTMQL 80
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T A+GM+AS +L GTKGKR A+P+ R+++HQP+GG +G D+ IQA +
Sbjct: 81 SECDIATYAMGMAASMGEFLLAAGTKGKRHALPHARILMHQPLGGVTGSASDIAIQAEQF 140
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
K R+ + FTG+S EQ+++D DRDR+ + EA+EYG +D +I R ++
Sbjct: 141 QVIKKEMFRLNAEFTGKSIEQIEQDSDRDRWFTAPEALEYGFVDKIITRGNL 192
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
Length = 217
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 129/177 (72%), Gaps = 1/177 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++QLL L+++DP KDI L++NSPGG ++A +AIY
Sbjct: 40 DIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIYLYINSPGGVVTAGLAIY 99
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DV+T+ G + S + +L GG KGKRFA+P+ RVMIHQP+GGA GQ D++I
Sbjct: 100 DTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPHARVMIHQPLGGARGQATDIQI 159
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDS 255
QA+EI+ K+ T+ ++G +G+ FE+V D +RD +MS EA EYG+ID V+ RD+
Sbjct: 160 QAQEILKLKEMLTKRMAGHSGQPFEKVAADTERDNFMSAFEAAEYGLIDKVLTHRDT 216
>gi|261346364|ref|ZP_05974008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
gi|282565678|gb|EFB71213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
Length = 206
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 132/196 (67%), Gaps = 1/196 (0%)
Query: 56 QRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
Q Q ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+A
Sbjct: 7 QEQLASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++ +D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAHHTGKSIEEISRDTERDR 186
Query: 235 YMSPIEAVEYGIIDGV 250
++S EA EYG++D +
Sbjct: 187 FLSANEAKEYGLVDHI 202
>gi|311031871|ref|ZP_07709961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. m3-13]
Length = 195
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 133/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ +VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFIKPNVSTICVGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ ++ I+S TG+ E + +D DRD +M+ A+EYG+ID V+++
Sbjct: 133 ATEIEIAAKRILFLREKLNTILSEQTGQPIEVISRDTDRDNFMTAERALEYGLIDKVMNK 192
Query: 254 DSI 256
+++
Sbjct: 193 NNL 195
>gi|323456646|gb|EGB12512.1| hypothetical protein AURANDRAFT_70482, partial [Aureococcus
anophagefferens]
Length = 1031
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 126/177 (71%)
Query: 72 TAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGS 131
T G + D + LLK+RI+ LG+ ++D VA+ +++Q+L L +DP DI L++NSPGGS
Sbjct: 62 TGANGEQIDVVSRLLKDRILLLGSEVNDEVANVLVAQMLYLANEDPEGDITLYINSPGGS 121
Query: 132 LSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGAS 191
+SA MAIYD +Q + DVSTV GM+AS + +LG G+KGKR ++PN R+MIHQP+GGA
Sbjct: 122 VSAGMAIYDTMQFIPCDVSTVCFGMAASMGAFLLGAGSKGKRKSLPNARIMIHQPLGGAQ 181
Query: 192 GQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIID 248
GQ D+EIQA+EI+ K +S +TG+ +++ +D DRD YM P EA +YG+ID
Sbjct: 182 GQAADIEIQAKEILFTKACINTYMSEYTGQPIDKLAEDTDRDFYMMPTEAQDYGLID 238
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 135/192 (70%), Gaps = 3/192 (1%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RIVFLG + +A+ I++QLL LDA+DP KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R +VST+ LG++AS + +L G KGKR +P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNHIRPEVSTICLGLAASMGAFLLSAGAKGKRMTLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ ++++D +RD +MS EA EYG++D VIDR
Sbjct: 131 ATDIEIQAKEILYHKRRLNEHLAAHTGQPLSRIEEDTERDFFMSAAEATEYGLVDLVIDR 190
Query: 254 --DSIIPLVPVP 263
+ P+V VP
Sbjct: 191 RPSATRPIVAVP 202
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D A +++QLL L+A+DP KDI
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+ I A I+ KD +I+S TG+ E ++KD++RD +M EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDDVI 190
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 139/203 (68%), Gaps = 7/203 (3%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P T+ RG A D LL+ERI+FLG ID+ VA I++QL+ L+++DP +DI
Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIY 86
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
+++NSPGGS+SA + IYD +Q +R ++STV +GM+AS + +L G KGKR ++P++R+M
Sbjct: 87 IYINSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIM 146
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP GGA GQ D+ IQAREI + +++ TG+ E+V++D +RDR+M+P EA+
Sbjct: 147 IHQPSGGAQGQETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMNPQEAL 206
Query: 243 EYGIIDGVIDRDSIIPLVPVPEK 265
EYG+ID + ++ P PEK
Sbjct: 207 EYGLIDAIFEKR------PTPEK 223
>gi|56478265|ref|YP_159854.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
gi|67460188|sp|Q5P161.1|CLPP_AZOSE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56314308|emb|CAI08953.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
Length = 212
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
V L P + RG A D LLKER++FL ++D A+ I++QLL L++++P K
Sbjct: 15 VGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDK 74
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
D+ ++NSPGGS+S+ MAIYD +Q ++ VST+ +G +AS S +L G KGKRF +PN+
Sbjct: 75 DVYFYINSPGGSVSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNS 134
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
RVMIHQP+GG GQ D+EI AREI+ + +++ TG+ EQ++KD DRDR+MS
Sbjct: 135 RVMIHQPLGGFQGQASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAA 194
Query: 240 EAVEYGIIDGVI 251
+AVEYGI+D V+
Sbjct: 195 DAVEYGIVDKVL 206
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RI+ LG IDD VA+ I++QLL L+++DP K
Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI +++NSPGGS++A MAIYD +Q V+ VST+ +G +AS +++L GTKGKR+A+P++
Sbjct: 61 DINIYINSPGGSVTAGMAIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GG GQ D+EIQA+EI+ K +I TG+S E+V+KD DRD +M
Sbjct: 121 RIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGAT 180
Query: 240 EAVEYGIIDGVIDRDSIIPL 259
EA YGI+D + + ++ L
Sbjct: 181 EAKAYGIVDEIQNPRKVVGL 200
>gi|399049433|ref|ZP_10740394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|433545929|ref|ZP_20502269.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|398052868|gb|EJL45105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|432182773|gb|ELK40334.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 193
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 125/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+A+++QLL L A+DP KDI L++NSPGGS++A MAI D +Q
Sbjct: 24 LLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGSVTAGMAIIDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DVST+ GM+AS +++L G GKR+A+PN VMIHQP GG+ GQ D++I A I
Sbjct: 84 VAPDVSTICTGMAASMGAMLLVSGAPGKRYALPNAEVMIHQPWGGSQGQASDIKIAAERI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ IIS TG+ E+++KD DRD +MS EA+EYG+ID VI++
Sbjct: 144 LKHRSMLYSIISERTGKPVEKIEKDADRDYFMSAAEALEYGLIDNVIEK 192
>gi|391228000|ref|ZP_10264207.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
gi|391223493|gb|EIQ01913.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
Length = 225
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 130/195 (66%), Gaps = 1/195 (0%)
Query: 58 QHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQD 116
+H++ P RG + D LLK+RI+F+G IDD VA+ +I+QLL L +D
Sbjct: 14 RHNIVSYYVPIVLENTGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMED 73
Query: 117 PTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAM 176
P KDI L++NSPGG ++ MAIYD + ++ DV T +G +AS A+++L GTKGKRFA+
Sbjct: 74 PKKDIHLYINSPGGVVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSAGTKGKRFAL 133
Query: 177 PNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYM 236
PN+RVMIHQP GGA GQ D+ I A+EI+ + + I+ TG++ EQV KD DRD YM
Sbjct: 134 PNSRVMIHQPSGGAGGQTADIAIAAKEILRWRRTLSETIARHTGKTAEQVDKDSDRDYYM 193
Query: 237 SPIEAVEYGIIDGVI 251
S +EA YG++D V+
Sbjct: 194 SALEAQAYGLVDHVV 208
>gi|238788008|ref|ZP_04631804.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
gi|238723956|gb|EEQ15600.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
Length = 194
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KGKRF +PN+RV
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++++D +RDR++S +A
Sbjct: 121 MIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAEQA 180
Query: 242 VEYGIIDGVIDR 253
VEYG++D V R
Sbjct: 181 VEYGLVDSVFTR 192
>gi|238759262|ref|ZP_04620429.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
gi|238702549|gb|EEP95099.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
Length = 194
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KGKRF +PN+RV
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++++D +RDR++S +A
Sbjct: 121 MIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAQQA 180
Query: 242 VEYGIIDGVIDR 253
VEYG++D V R
Sbjct: 181 VEYGLVDSVFTR 192
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 125/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++QLL L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ TR ++ +G+SF++V D +RD +MS EA EYG+ID V+
Sbjct: 144 LKLKEMLTRKMAEHSGQSFDKVAADTERDNFMSAEEAKEYGLIDKVL 190
>gi|414084879|ref|YP_006993590.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carnobacterium maltaromaticum LMA28]
gi|412998466|emb|CCO12275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carnobacterium maltaromaticum LMA28]
Length = 198
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 132/193 (68%), Gaps = 1/193 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L IDD VA+A+I+QLL LDAQD KDI +++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGAIDDNVANAVIAQLLFLDAQDSEKDIYIYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+++ +AIYD + ++ADV T+A+G++AS S +L GTKGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVTSGLAIYDTMNFIKADVQTIAMGIAASMGSFLLTAGTKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ +I++ TG+ E ++KD DRD +MS EA YG
Sbjct: 125 PLGGAQGQATEIEIAARHILKTRERLNKILADQTGQPIEVIEKDTDRDNFMSADEAKAYG 184
Query: 246 IIDGVIDRDSIIP 258
+ID ++ +P
Sbjct: 185 LIDEIMVNSKSLP 197
>gi|169628671|ref|YP_001702320.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus ATCC 19977]
gi|365869561|ref|ZP_09409108.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|418249260|ref|ZP_12875582.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus 47J26]
gi|418419814|ref|ZP_12992996.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|419711771|ref|ZP_14239234.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus M93]
gi|419714139|ref|ZP_14241557.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus M94]
gi|420940983|ref|ZP_15404245.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-153-0915]
gi|420986464|ref|ZP_15449625.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0206]
gi|420991380|ref|ZP_15454532.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0307]
gi|421006848|ref|ZP_15469962.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0119-R]
gi|421017034|ref|ZP_15480099.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0122-S]
gi|421023008|ref|ZP_15486056.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0731]
gi|421038792|ref|ZP_15501803.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0116-R]
gi|169240638|emb|CAM61666.1| ATP-dependent Clp protease, proteolytic subunit 2 [Mycobacterium
abscessus]
gi|353450915|gb|EHB99309.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus 47J26]
gi|363999018|gb|EHM20224.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|364000360|gb|EHM21559.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|382939093|gb|EIC63422.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus M93]
gi|382945710|gb|EIC70002.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus M94]
gi|392151770|gb|EIU77478.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 1S-153-0915]
gi|392187881|gb|EIV13520.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0206]
gi|392190391|gb|EIV16023.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
massiliense 2B-0307]
gi|392201391|gb|EIV26992.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0119-R]
gi|392213837|gb|EIV39391.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0122-S]
gi|392215705|gb|EIV41253.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 3A-0731]
gi|392227006|gb|EIV52520.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
abscessus 4S-0116-R]
Length = 197
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 125/172 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL ERI+FLG +DD +A+ + +Q+LLL A+DPTKDI L++NSPGGS+SA MAI+D +QL
Sbjct: 18 LLSERIIFLGQQVDDDIANKLCAQILLLTAEDPTKDIHLYINSPGGSISAGMAIFDTMQL 77
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T A+GM+AS +L GTKGKR A+P+ R+++HQP+GG +G D+ IQA +
Sbjct: 78 SECDIATYAMGMAASMGEFLLAAGTKGKRHALPHARILMHQPLGGVTGSASDIAIQAEQF 137
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
K R+ + FTG+S EQ+++D DRDR+ + EA+EYG +D +I R ++
Sbjct: 138 QVIKKEMFRLNAEFTGKSIEQIEQDSDRDRWFTAPEALEYGFVDKIITRGNL 189
>gi|225437581|ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic isoform 1 [Vitis vinifera]
gi|297743987|emb|CBI36957.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 107 LFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRH 166
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 167 IRPDVSTVCVGLAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 226
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N +S TG+S E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 227 LHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 273
>gi|238751006|ref|ZP_04612502.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
gi|238710696|gb|EEQ02918.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
Length = 207
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+EI+ K +++ TG+S E++++D +RDR++S +AVEYG++D V R
Sbjct: 152 HAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAEQAVEYGLVDSVFTR 205
>gi|311280666|ref|YP_003942897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
gi|308749861|gb|ADO49613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
Length = 207
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S Q++ D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQSLAQIESDTERDRFLSAPEAVEYGLVDSIL 203
>gi|182414555|ref|YP_001819621.1| endopeptidase Clp [Opitutus terrae PB90-1]
gi|177841769|gb|ACB76021.1| Endopeptidase Clp [Opitutus terrae PB90-1]
Length = 206
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 126/173 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+G+ IDD VA+ +I+Q+ L +DP KDI+L++NSPGG ++ MAIY
Sbjct: 20 DIYSRLLKDRIIFIGSPIDDTVANLVIAQMFFLQMEDPKKDIQLYINSPGGVVTGGMAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ D+ T +GM+AS ++++L GTKGKRFA+PN+RVMIHQP GGA GQ D+ I
Sbjct: 80 DTMNFLQCDIVTYCVGMAASMSTVLLSAGTKGKRFALPNSRVMIHQPSGGAGGQAADIAI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
A+EI+ + +I+ TG++ EQV+KD DRD YMS EA +YGI+D V++
Sbjct: 140 AAKEILRWRKTLNEVIAKHTGKTPEQVEKDSDRDYYMSAQEAKDYGIVDHVVE 192
>gi|125975222|ref|YP_001039132.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum ATCC 27405]
gi|256003116|ref|ZP_05428108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281419196|ref|ZP_06250212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|385777706|ref|YP_005686871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|419722741|ref|ZP_14249878.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
gi|419726242|ref|ZP_14253265.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|166201818|sp|A3DJ10.1|CLPP_CLOTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125715447|gb|ABN53939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|255992807|gb|EEU02897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281407062|gb|EFB37324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|316939386|gb|ADU73420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|380770294|gb|EIC04191.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|380781121|gb|EIC10782.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
Length = 194
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+ L + I+D A +++Q+L L+A+DP KDI
Sbjct: 1 MSLVPIVVEQTNRGERSYDIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A AIYD +Q V+ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 QLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D++I A +I+ K+ RI+S TG+ FE++++D +RD +MS EA
Sbjct: 121 MIHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEA 180
Query: 242 VEYGIIDGVIDR 253
YGI+D V++R
Sbjct: 181 KAYGIVDEVMER 192
>gi|425737678|ref|ZP_18855949.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
gi|425481335|gb|EKU48495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
Length = 195
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLK+RI+ LG+ +DD VA++I+SQLL L AQD KDI L++
Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQVDDNVANSIVSQLLFLQAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKR+A+PN VMIHQ
Sbjct: 65 NSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A I+ + +I+S TG+ ++++KD DRD +++ EA EYG
Sbjct: 125 PLGGAQGQATEIEIAANHILKTRAKLNKILSERTGQPIDKIEKDTDRDNFLTAEEAKEYG 184
Query: 246 IIDGVI 251
+ID V+
Sbjct: 185 LIDEVM 190
>gi|434387492|ref|YP_007098103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428018482|gb|AFY94576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 203
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RIVFLG + +A+ I++QLL L+A+DP KDI L++NSPGGS+S
Sbjct: 11 RGERAFDIYSRLLRDRIVFLGGQVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVS 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R DVSTV +G +AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNQIRPDVSTVCMGFAASMGAFLLSAGAKGKRTSLPSSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+ IQA+EI++ K +++ TG+ E++Q+D DRD YMS +EA +YG+ID VIDR
Sbjct: 131 ATDIAIQAKEILYIKGTLNDLLAKHTGQPLEKIQEDTDRDFYMSAVEAKDYGLIDTVIDR 190
>gi|339007073|ref|ZP_08639648.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
gi|338776282|gb|EGP35810.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
Length = 195
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG I+D VA+++++QLL L A+DP KDI +++NSPGGS++
Sbjct: 15 RGERAYDIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPGGSIT 74
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +G++AS S +L G KGKR+A+PN+ +MIHQP+GGA GQ
Sbjct: 75 AGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQPLGGAQGQ 134
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ +++ I + TG+ +E++ KD DRD ++S A EYG+ID VI R
Sbjct: 135 ASDIEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAKEYGLIDEVITR 194
>gi|332528101|ref|ZP_08404132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rubrivivax
benzoatilyticus JA2]
gi|332112672|gb|EGJ12465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rubrivivax
benzoatilyticus JA2]
Length = 202
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LL+ERIVFL ++D VA+ + +QLL L++++P KDI
Sbjct: 9 LGMVPMVIEQSGRGERAYDIYSRLLRERIVFLVGPVNDQVANLVCAQLLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA ++I+D + ++ +VST+ +GM+AS S +L G KGKRFA+PN+RV
Sbjct: 69 SLYINSPGGSVSAGLSIFDTMNFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNSRV 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EIQAREI+ ++ RI + TG+S E++ D++RD ++SP EA
Sbjct: 129 MIHQPSGGAQGQASDIEIQAREIIKTREQLNRIYAERTGQSIEKIAADMERDMWLSPGEA 188
Query: 242 VEYGIIDGVIDR 253
+YG+ID V+++
Sbjct: 189 KDYGLIDQVLEK 200
>gi|228470612|ref|ZP_04055469.1| Clp protease [Porphyromonas uenonis 60-3]
gi|228307739|gb|EEK16715.1| Clp protease [Porphyromonas uenonis 60-3]
Length = 221
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 127/175 (72%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A+ D L+ +RI+FLG ++D+ A+ I +QLL LD DP KDI +++NSPGGS+ A
Sbjct: 30 AQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPGGSVYAGF 89
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
IYD +Q V DVST+ GM+AS A+++L G +GKR+A+P++RVMIHQPMGG GQ D
Sbjct: 90 GIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQPMGGMQGQASD 149
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+EI A+EI+ K +II+ +GRS E++++D DRD++M+ EA+EYG+ID V+
Sbjct: 150 IEIAAKEILKVKAELYKIIADHSGRSVEEIERDSDRDKWMTASEALEYGMIDKVL 204
>gi|30023185|ref|NP_834816.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47567358|ref|ZP_00238071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49481130|ref|YP_039138.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52140414|ref|YP_086415.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
E33L]
gi|75759660|ref|ZP_00739744.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|118480187|ref|YP_897338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis str. Al Hakam]
gi|190015186|ref|YP_001966706.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015451|ref|YP_001967031.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015619|ref|YP_001967344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|196032944|ref|ZP_03100357.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196039610|ref|ZP_03106915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|196045601|ref|ZP_03112831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|206970378|ref|ZP_03231331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208702014|ref|YP_002267309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217956873|ref|YP_002335967.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|217962631|ref|YP_002341203.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|218231097|ref|YP_002369926.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
B4264]
gi|218848317|ref|YP_002455085.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218900271|ref|YP_002448682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
G9842]
gi|218906323|ref|YP_002454157.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH820]
gi|222098603|ref|YP_002532661.1| ATP-dependent clp protease proteolytic subunit [Bacillus cereus Q1]
gi|225867113|ref|YP_002752491.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228903623|ref|ZP_04067744.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228910978|ref|ZP_04074786.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228917753|ref|ZP_04081294.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228923875|ref|ZP_04087152.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228930150|ref|ZP_04093159.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228936434|ref|ZP_04099232.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228942286|ref|ZP_04104825.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228948867|ref|ZP_04111142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228955388|ref|ZP_04117393.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228961377|ref|ZP_04122991.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228968242|ref|ZP_04129240.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228975215|ref|ZP_04135773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981853|ref|ZP_04142148.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228988373|ref|ZP_04148465.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229072597|ref|ZP_04205799.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|229082356|ref|ZP_04214819.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229087619|ref|ZP_04219749.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|229094242|ref|ZP_04225321.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|229112558|ref|ZP_04242095.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229124654|ref|ZP_04253836.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229130395|ref|ZP_04259353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|229147676|ref|ZP_04276019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|229153305|ref|ZP_04281483.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|229158714|ref|ZP_04286772.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|229164770|ref|ZP_04292604.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|229181405|ref|ZP_04308733.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|229187359|ref|ZP_04314502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|229193390|ref|ZP_04320339.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|254724422|ref|ZP_05186206.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. A1055]
gi|296505568|ref|YP_003667268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|301056609|ref|YP_003794820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|365162906|ref|ZP_09359029.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
7_6_55CFAA_CT2]
gi|375287157|ref|YP_005107596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|376258514|ref|YP_005150236.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
NC7401]
gi|376269038|ref|YP_005121750.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|384182975|ref|YP_005568737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384189233|ref|YP_005575129.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|402563256|ref|YP_006605980.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-771]
gi|410677561|ref|YP_006929932.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus
thuringiensis Bt407]
gi|423355628|ref|ZP_17333252.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|423356394|ref|ZP_17334004.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|423363017|ref|ZP_17340517.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD022]
gi|423375306|ref|ZP_17352643.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
AND1407]
gi|423386632|ref|ZP_17363887.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-2]
gi|423411112|ref|ZP_17388232.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3O-2]
gi|423427236|ref|ZP_17404267.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-2]
gi|423433103|ref|ZP_17410107.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4O-1]
gi|423438545|ref|ZP_17415526.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X12-1]
gi|423506972|ref|ZP_17483561.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HD73]
gi|423527041|ref|ZP_17503486.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB1-1]
gi|423554402|ref|ZP_17530728.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
ISP3191]
gi|423565981|ref|ZP_17542256.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A1]
gi|423571713|ref|ZP_17547953.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|423572165|ref|ZP_17548378.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|423573202|ref|ZP_17549321.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|423578071|ref|ZP_17554189.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|423583301|ref|ZP_17559412.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD014]
gi|423588968|ref|ZP_17565054.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD045]
gi|423608514|ref|ZP_17584406.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|423608923|ref|ZP_17584814.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|423631886|ref|ZP_17607633.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD154]
gi|423634004|ref|ZP_17609657.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD156]
gi|423644305|ref|ZP_17619922.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD166]
gi|423650994|ref|ZP_17626564.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD169]
gi|423658059|ref|ZP_17633358.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD200]
gi|434378268|ref|YP_006612912.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-789]
gi|449092201|ref|YP_007424642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|452201640|ref|YP_007481721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|67460463|sp|Q631K2.1|CLPP2_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460476|sp|Q6HBD8.1|CLPP2_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460524|sp|Q815J6.1|CLPP2_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17981472|gb|AAL51030.1|AF454757_1 ClpP1 [Bacillus thuringiensis]
gi|29898745|gb|AAP12017.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47555979|gb|EAL14317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49332686|gb|AAT63332.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51973883|gb|AAU15433.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus E33L]
gi|74492856|gb|EAO55988.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|116584526|gb|ABK00643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|116584862|gb|ABK00977.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|116585132|gb|ABK01241.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|118419412|gb|ABK87831.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|195994373|gb|EDX58328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196023432|gb|EDX62109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|196029770|gb|EDX68372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|206734955|gb|EDZ52124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208657869|gb|ACI30239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217064081|gb|ACJ78331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|217068436|gb|ACJ82684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|218159054|gb|ACK59046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|218536274|gb|ACK88672.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218540368|gb|ACK92764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218541218|gb|ACK93612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|221242662|gb|ACM15372.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus Q1]
gi|225789761|gb|ACO29978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228590104|gb|EEK47974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228596063|gb|EEK53740.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|228601980|gb|EEK59473.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228618700|gb|EEK75692.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228624698|gb|EEK81467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228629909|gb|EEK86560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228635689|gb|EEK92176.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228653094|gb|EEL08974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228658805|gb|EEL14463.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228670938|gb|EEL26245.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|228689234|gb|EEL43056.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228695735|gb|EEL48590.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228700788|gb|EEL53311.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|228710573|gb|EEL62546.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228771354|gb|EEM19828.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228777965|gb|EEM26237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228784494|gb|EEM32515.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228791415|gb|EEM39019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228798262|gb|EEM45261.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228804180|gb|EEM50794.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228810829|gb|EEM57175.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228817330|gb|EEM63416.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228823266|gb|EEM69100.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228829435|gb|EEM75063.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228835674|gb|EEM81038.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228841990|gb|EEM87096.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228848633|gb|EEM93479.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228856052|gb|EEN00591.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|296326620|gb|ADH09548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|300378778|gb|ADK07682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324329059|gb|ADY24319.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942942|gb|AEA18838.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|358355684|dbj|BAL20856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|358356253|dbj|BAL21424.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
NC7401]
gi|363617191|gb|EHL68590.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
7_6_55CFAA_CT2]
gi|364514838|gb|AEW58237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|401076768|gb|EJP85119.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD022]
gi|401079111|gb|EJP87414.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|401081980|gb|EJP90251.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|401092725|gb|EJQ00850.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
AND1407]
gi|401108128|gb|EJQ16060.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3O-2]
gi|401109421|gb|EJQ17345.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-2]
gi|401113015|gb|EJQ20887.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4O-1]
gi|401116160|gb|EJQ24002.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X12-1]
gi|401181200|gb|EJQ88353.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
ISP3191]
gi|401192773|gb|EJQ99783.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A1]
gi|401198721|gb|EJR05636.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|401199716|gb|EJR06613.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|401203128|gb|EJR09969.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|401209361|gb|EJR16120.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD014]
gi|401215208|gb|EJR21926.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|401225356|gb|EJR31905.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD045]
gi|401236392|gb|EJR42852.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|401238523|gb|EJR44964.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|401263108|gb|EJR69241.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD154]
gi|401271370|gb|EJR77387.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD166]
gi|401280314|gb|EJR86235.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD169]
gi|401281910|gb|EJR87815.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD156]
gi|401288311|gb|EJR94064.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD200]
gi|401632053|gb|EJS49843.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-2]
gi|401791908|gb|AFQ17947.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-771]
gi|401876825|gb|AFQ28992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-789]
gi|402445783|gb|EJV77651.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HD73]
gi|402454204|gb|EJV85997.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB1-1]
gi|409176690|gb|AFV20995.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus
thuringiensis Bt407]
gi|449025958|gb|AGE81121.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|452107033|gb|AGG03973.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 193
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ +A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKI 189
>gi|358067641|ref|ZP_09154119.1| ATP-dependent Clp protease proteolytic subunit [Johnsonella ignava
ATCC 51276]
gi|356694294|gb|EHI55957.1| ATP-dependent Clp protease proteolytic subunit [Johnsonella ignava
ATCC 51276]
Length = 193
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG A D LLK+RI+FLG ++D A +++QLL L+++DP+KDI
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTAGLVVAQLLFLESEDPSKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+ + MAIYD +Q V+ DVST+ +GM+AS + +L GG KGKR+A+PN+ +
Sbjct: 61 NLYINSPGGSVVSGMAIYDTMQYVKCDVSTICMGMAASMGAFLLAGGAKGKRYALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A +I+ ++ +++ TG+ E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGARGQATEIQIVAEQILKDRKRLNEMLAANTGQPIEVIERDTERDYYMSAEEA 180
Query: 242 VEYGIIDGVI 251
+ YGI+D VI
Sbjct: 181 MSYGIVDKVI 190
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+FLG IDD +A+ +++QLL L+++DP KDI L++
Sbjct: 4 PMVIEQSGRGERAYDIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +S+ +AIYD +Q +++ VST+ +G +AS A+++L GG GKR A+PN RVMIHQ
Sbjct: 64 NSPGGVISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EI A+EI+ ++ I+ TG++ ++++ D DRD YMS EA+EY
Sbjct: 124 PLGGAHGQATDIEIHAKEILKIREKINDILVKHTGQTRKRIKADTDRDFYMSAAEALEYS 183
Query: 246 IIDGVID 252
IID VI+
Sbjct: 184 IIDKVIE 190
>gi|251798425|ref|YP_003013156.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247546051|gb|ACT03070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 122/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+++I+QLL L A DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDIHLYINSPGGSVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS SL+L G KGKRFA+PN VMIHQP+GG GQ D++I A I
Sbjct: 84 IKPDVSTICMGMAASMGSLLLTAGAKGKRFALPNAEVMIHQPLGGVRGQASDIKIHADWI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I TG+ +E++ +D DRD +MS +A+ YG+ID VI
Sbjct: 144 LKTKQKLNEIYVERTGQPYEKIDRDTDRDNFMSAEDALNYGLIDKVI 190
>gi|373851099|ref|ZP_09593900.1| ATP-dependent Clp protease proteolytic subunit [Opitutaceae
bacterium TAV5]
gi|391228002|ref|ZP_10264209.1| protease subunit of ATP-dependent protease [Opitutaceae bacterium
TAV1]
gi|372477264|gb|EHP37273.1| ATP-dependent Clp protease proteolytic subunit [Opitutaceae
bacterium TAV5]
gi|391223495|gb|EIQ01915.1| protease subunit of ATP-dependent protease [Opitutaceae bacterium
TAV1]
Length = 208
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 121/167 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+F+G IDD VA+ +I+QLL L +DP KDI L++NSPGG ++ MAIYD +
Sbjct: 25 LLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPGGVVTGGMAIYDTINF 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV T +G +AS A+++L GTKGKRFA+PN+RVMIHQP GGA GQ D+ I A+EI
Sbjct: 85 LQCDVVTYCVGQAASMATVLLSAGTKGKRFALPNSRVMIHQPSGGAGGQTADIAIAAKEI 144
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ + + I+ TG++ EQV KD DRD YMS +EA YG++D V+
Sbjct: 145 LRWRRTLSETIARHTGKTAEQVDKDSDRDYYMSALEAQAYGLVDHVV 191
>gi|403380350|ref|ZP_10922407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 133/190 (70%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG A D LLK+RI+FLG I+D VA+A+I+QLL LDAQD KDI
Sbjct: 1 MSFIPMVVEPDARGERAYDIYSRLLKDRIIFLGTPINDQVANAVIAQLLFLDAQDQEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D +Q +++DVST+ +G++AS + +L G GKR+A+PN+ +
Sbjct: 61 HLYINSPGGSISAGMAIFDTMQFIKSDVSTICVGLAASMGAFLLAAGEIGKRYALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EI+A+ I+ ++ I++ T + E+++KD DRD +M +A
Sbjct: 121 MIHQPLGGAEGQASDIEIRAKRILRMREKLNHILAERTKQPLERIEKDTDRDYFMWADQA 180
Query: 242 VEYGIIDGVI 251
EYGIID VI
Sbjct: 181 KEYGIIDKVI 190
>gi|325264756|ref|ZP_08131485.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
gi|324030048|gb|EGB91334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
Length = 193
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A I++QLL L+A DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS+++ +AIYD +Q ++ DVSTV +GM+AS + +L GG KGKRFA+PN +
Sbjct: 61 QLYINSPGGSVTSGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++ I A I+ + +I++ TG+S + ++ D +RD YMS +EA
Sbjct: 121 MIHQPSGGAQGQATEIHIVAEHILKIRHKLNQILAENTGQSLDVIKVDTERDNYMSALEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDEVI 190
>gi|430375836|ref|ZP_19430239.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
gi|429541067|gb|ELA09095.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
Length = 213
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG + D LL+ER++FL ++D +A+ I++QLL L+A +P KDI L++
Sbjct: 21 PMVIEQSARGERSFDIYSRLLRERVIFLTAEVEDHMANLIVAQLLFLEADNPEKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG ++A MAIYD + ++ DVST+ LG +AS + +L GTKGKR+A+ N+RVMIHQ
Sbjct: 81 NSPGGVVTAGMAIYDTMNFIKPDVSTICLGQAASMGAFLLSAGTKGKRYALKNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI AREI++ K+ R+I+ TG+ +E+V KD DRD ++S A YG
Sbjct: 141 PLGGFRGQASDIEIHAREILYLKEKLNRLIAEHTGQDYEKVAKDTDRDNFLSADAAKAYG 200
Query: 246 IIDGVIDR 253
++D V+D+
Sbjct: 201 LVDEVLDK 208
>gi|428225971|ref|YP_007110068.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427985872|gb|AFY67016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 200
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL L+A+DP KDI L++NSPGGS+S
Sbjct: 11 RGERAFDIYSKLLQERIIFLGQPVDSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVS 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + V+ DV T+ LG++AS + +L G KGKR ++PN+R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNHVKPDVCTICLGLAASMGAFLLAAGAKGKRMSLPNSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI++ K I++ TG+ ++++ D DRD +MS EA YG+ID VIDR
Sbjct: 131 ATDIEIQAREILYIKRRLNEILAERTGQPLDRIETDTDRDFFMSAEEARTYGLIDQVIDR 190
>gi|421872665|ref|ZP_16304283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|372458638|emb|CCF13832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 193
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG I+D VA+++++QLL L A+DP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ DVST+ +G++AS S +L G KGKR+A+PN+ +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ +++ I + TG+ +E++ KD DRD ++S A EYG+ID VI R
Sbjct: 133 ASDIEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAKEYGLIDEVITR 192
>gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 192
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 128/172 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG IDD VA+++I+QLL L A+DP KD+ L++NSPGGS++A MAI
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDQVANSVIAQLLFLAAEDPEKDVSLYINSPGGSVTAGMAIL 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV+T+ +GM+AS A+++L G KGKR A+PN+ +MIHQP+GG GQ +D++I
Sbjct: 79 DTMQYIRPDVATICVGMAASMAAVLLAAGAKGKRRALPNSEIMIHQPLGGVQGQAVDIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A I+ ++ RI+S TG+ ++++D DRDR+MS EA EYG+ID VI
Sbjct: 139 HADRILRVREKLNRILSERTGQPLSRIEEDTDRDRFMSADEAKEYGLIDDVI 190
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
Query: 60 DVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPT 118
D+ +S P + RG A D LLKER++FL ++D +A+ I++Q+L L+A++P
Sbjct: 433 DLSMSVVPMVVEQSSRGERAYDIYSRLLKERVIFLNGQVEDNMANLIVAQMLFLEAENPE 492
Query: 119 KDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPN 178
KDI L++NSPGG +++ M+IYD +Q ++ DVST+ LG + S + +L G KGKRF +PN
Sbjct: 493 KDIYLYINSPGGVITSGMSIYDTMQFIKPDVSTICLGQACSMGAFLLTAGAKGKRFCLPN 552
Query: 179 TRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSP 238
RVMIHQP+GG GQ D++I A E++ K +++ TG+S + ++KD DRD +MS
Sbjct: 553 ARVMIHQPLGGYQGQATDIQIHAEEMLKVKRRMNELMAHHTGKSIKTIEKDTDRDNFMSA 612
Query: 239 IEAVEYGIIDG 249
EA++YG+IDG
Sbjct: 613 KEAMDYGLIDG 623
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 132/186 (70%), Gaps = 5/186 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG A D LLK RIVFLG I+D VA+ I++QLL L+++DP KDI L++N
Sbjct: 9 QTP----RGERAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYLYIN 64
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGG +SA +AIYD ++ ++ V+TV +G +AS A+++L G KGKR+A+P++RVMIHQP
Sbjct: 65 SPGGEVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMIHQP 124
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GGA G D+EI REI+ K I++ TG+ E+++KD DRD +MS EA EYGI
Sbjct: 125 LGGAYGPAADIEIHTREILKIKRVLNEILAYHTGQPIEKIEKDTDRDFFMSAYEAKEYGI 184
Query: 247 IDGVID 252
+D V++
Sbjct: 185 VDEVLE 190
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RIV LG IDD VA+ I++QLL L+++DP K
Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +++L G KGKR+A+P++
Sbjct: 61 DINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GG GQ D+EIQA+EI+ K +I TG+S E+V+KD DRD +M
Sbjct: 121 RIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGAS 180
Query: 240 EAVEYGIIDGVIDRDSIIPL 259
EA YGIID + + ++ L
Sbjct: 181 EAKAYGIIDEIQNPRKVVGL 200
>gi|330817271|ref|YP_004360976.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
gladioli BSR3]
gi|327369664|gb|AEA61020.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
gladioli BSR3]
Length = 217
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TLA Q L P T+ RG + D LLKERIVF+ ++D A+ +++
Sbjct: 10 TLASHAPQDFETKALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI L++NSPGGS+SA +AIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGLAASMGAFLLSS 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ ++ +I++ TG+ E++
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADNTGQDVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG+ID V
Sbjct: 190 RDTDRDNFMSSDDAKAYGLIDHV 212
>gi|385810287|ref|YP_005846683.1| ATP-dependent Clp protease catalytic subunit [Ignavibacterium album
JCM 16511]
gi|383802335|gb|AFH49415.1| ATP-dependent Clp protease catalytic subunit [Ignavibacterium album
JCM 16511]
Length = 206
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVF+G IDD +A I+QL+ L+A+DP KDI +++NSPGGS++A +AIY
Sbjct: 27 DIYSRLLRERIVFIGTPIDDHIASLTIAQLIFLEAEDPEKDIHIYINSPGGSVTAGLAIY 86
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMG-GASGQVLDVE 198
D ++ ++ DVST+ +GM+AS A+++L GGTKGKRFA+P+++++IHQP G GQV DVE
Sbjct: 87 DTMRFIKPDVSTICVGMAASMAAVLLAGGTKGKRFALPHSKILIHQPWTQGIGGQVTDVE 146
Query: 199 IQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
I A+E++ ++ I++ TG+ +EQ+ KD +RD +++ EA EY +ID +I++ S
Sbjct: 147 IHAKEMLKTRETLYNILAEHTGKPYEQIAKDCERDYFLTAQEAKEYNLIDDIIEKRS 203
>gi|334118528|ref|ZP_08492617.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333459535|gb|EGK88148.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 229
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 133/177 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERIVFLG + D VAD+I++QLL LDA+DP KD+++++NSPGGS++A MAIY
Sbjct: 42 DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQMYINSPGGSVTAGMAIY 101
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DV T+ G++AS + +L G GKR ++P++R+MIHQP+GGA GQ +D+EI
Sbjct: 102 DTMQQIRPDVVTICYGLAASMGAFLLTAGAHGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 161
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
QA+EI+++K ++++ TG+ ++++ D +RD +MS EA YG++D VI ++++
Sbjct: 162 QAKEILYHKRKLNQLLAHHTGQPLDKLEADTERDFFMSAEEAKNYGLVDRVIAKENL 218
>gi|238026973|ref|YP_002911204.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
gi|237876167|gb|ACR28500.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
Length = 217
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TLA Q L P T+ RG + D LLKERIVF+ ++D A+ +++
Sbjct: 10 TLASHAPQDFETKALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L++++P KDI L++NSPGGS+SA +AIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGLAASMGAFLLSS 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKR+A+PN RVMIHQP+GGA GQ D+EIQAREI++ ++ +I++ TG+ E++
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRERLNKILAENTGQDVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG+ID V
Sbjct: 190 RDTDRDNFMSSDDAKAYGLIDHV 212
>gi|376003777|ref|ZP_09781580.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066153|ref|ZP_17054943.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
gi|375327808|emb|CCE17333.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712195|gb|EKD07384.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
Length = 198
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 127/168 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L +ERI+FL +DD +A+AI++ +L LD++DP+K I L++NSPGGS++A MAIYD +Q
Sbjct: 27 LFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPSKPIYLYINSPGGSVTAGMAIYDTMQY 86
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R+DV T+ +GM+AS + +L GTKGKR A+P+ R+MIHQP+GG GQ D+EI+A+EI
Sbjct: 87 IRSDVVTICVGMAASMGAFLLAAGTKGKRLALPHARIMIHQPLGGTRGQATDIEIEAKEI 146
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ + +++ +G++ E+++KD DRD +MS EA EYG+ID VI+
Sbjct: 147 LRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSAAEAHEYGLIDQVIE 194
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RIVFLG +D +A+ I++QLL L+A+D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R DVST+ LG++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++S TG+ E++++D +RD +MS E+V+YG+ID VIDR
Sbjct: 131 ATDIEIQAKEILYHKKRLNTLLSEHTGQPLERIEQDTERDFFMSAKESVDYGLIDLVIDR 190
>gi|229828304|ref|ZP_04454373.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
gi|229792898|gb|EEP29012.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
Length = 190
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 122/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ++++ A I++QLL L+++DP KDI L++NSPGG ++ MAIYD +
Sbjct: 21 LLKDRIIFLGEDVNETTASLIVAQLLFLESEDPNKDIHLYINSPGGVVTCGMAIYDTMNY 80
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS + +L GG KGKR+A+PN +MIHQP GGA GQ ++EI A I
Sbjct: 81 IKPDVSTICIGMAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAKGQATEIEIAAESI 140
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K +I++ TG+++EQV D +RD Y+ EA+EYGI+D +ID
Sbjct: 141 LKTKRKMNQILADNTGKTYEQVAADTERDHYLDAKEALEYGIVDQIIDH 189
>gi|319650519|ref|ZP_08004659.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
2_A_57_CT2]
gi|317397700|gb|EFV78398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
2_A_57_CT2]
Length = 201
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 132/183 (72%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I++QLL L+A++P KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAENPEKDISIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ V T+ +GM+AS + +L G KGKRFA+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVQTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EI A+ I+ ++ I+S TG+ E + +D DRD +M+ A+EYG++D +I R
Sbjct: 133 ATEIEIAAKRILFLREKLNTILSERTGQPLEVIARDTDRDNFMTAERALEYGLVDQIITR 192
Query: 254 DSI 256
+S+
Sbjct: 193 NSL 195
>gi|374583503|ref|ZP_09656597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
gi|374419585|gb|EHQ92020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
Length = 205
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 129/172 (75%), Gaps = 3/172 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ID VA+ I++Q+L L+A+DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 25 LLKDRIIFLGGAIDADVANLIVAQMLFLEAEDPEKDINLYINSPGGSITAGMAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM---GGASGQVLDVEIQA 201
+R+DV T+ +GM+AS + +L GTKGKR A+PN+ V+IHQP+ GG SGQ ++EI A
Sbjct: 85 IRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLIHQPLIGGGGLSGQATEIEIHA 144
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++++ K +I++ TG+ E+V+KD DRD YM+ EA EYG++D V+++
Sbjct: 145 KQLLRTKAKMNKILAERTGQPIEKVEKDTDRDYYMTAEEAKEYGLVDQVLEK 196
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 136/190 (71%), Gaps = 4/190 (2%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG +D +A+ I++QLL L+A+DP KDI L++NSPGGS+S
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVS 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R D+ST+ +G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ E++++D +RD +MS E+ YG+ID VIDR
Sbjct: 131 ATDIEIQAKEILYHKRRLNEFLAQHTGQPLEKIEEDTERDFFMSAEESKNYGLIDQVIDR 190
Query: 254 D---SIIPLV 260
+ IPLV
Sbjct: 191 RPSATRIPLV 200
>gi|239623656|ref|ZP_04666687.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47_FAA]
gi|239521687|gb|EEQ61553.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47FAA]
Length = 193
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+FLG ++D A +++QLL L+++DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA AIYD + ++ DVST+ +GM+AS + +L GG KGKRFA+PN+ +
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ +++I A I+ + I++ TGR E +++D +RD YMS EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID +I
Sbjct: 181 KEYGLIDEII 190
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 124/168 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L +ERI+FLG + D +A+ I++ +L LD+ DP K I L++NSPGGS++A +AIYD +Q
Sbjct: 27 LGQERIIFLGQEVTDGLANRIVAYMLYLDSDDPNKPIYLYINSPGGSVTAGLAIYDTMQY 86
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADV T+ LG++AS S +L GTKGKR A+PN+R+MIHQPMGG GQ D+EI+A EI
Sbjct: 87 IKADVITICLGLAASMGSFLLAAGTKGKRLALPNSRIMIHQPMGGTRGQATDIEIEANEI 146
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ + +++ TG+S E+++KD DRD YMS EA EYG+ID VI+
Sbjct: 147 LRVRSELNNMLAERTGQSLEKIEKDTDRDYYMSAEEAKEYGLIDQVIE 194
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG+ I+D +A+ +++Q+L L+++DP KDI L++NSPGGS++
Sbjct: 12 RGERAYDIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDINLYINSPGGSVT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A + IYD +Q ++ +ST+ +G +AS A+++L GTKGKR A+PN+RVM+HQP+GG GQ
Sbjct: 72 AGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRIALPNSRVMLHQPLGGVQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+EI +D II+ T + E+V +D DRD +MS EA+ YGI+D VI++
Sbjct: 132 ATDIEIHAKEIKKIRDRLNEIIAKHTNQDIEKVARDTDRDFFMSAEEALSYGIVDKVIEK 191
>gi|197284027|ref|YP_002149899.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|226329068|ref|ZP_03804586.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198]
gi|227358102|ref|ZP_03842444.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|425066920|ref|ZP_18470036.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW6]
gi|425073647|ref|ZP_18476753.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW4]
gi|226706465|sp|B4EU53.1|CLPP_PROMH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|194681514|emb|CAR40393.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|225202254|gb|EEG84608.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Proteus
penneri ATCC 35198]
gi|227161837|gb|EEI46869.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|404594918|gb|EKA95473.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW4]
gi|404601591|gb|EKB01983.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW6]
Length = 207
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 137/207 (66%), Gaps = 1/207 (0%)
Query: 50 LALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQ 108
++ Q Q ++ P RG + D LLKERI+FL ++D +A+ I++Q
Sbjct: 1 MSFNDTQEQFAPNMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQ 60
Query: 109 LLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGG 168
+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ADVST+ +G + S + +L G
Sbjct: 61 MLFLEAENPEKDINLYINSPGGVITAGMSIYDTMQYIKADVSTICMGQACSMGAFLLSAG 120
Query: 169 TKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQK 228
KGKR +PN+RVMIHQP+GG GQ D++I A+EI+ K +++ TG+S E++++
Sbjct: 121 AKGKRICLPNSRVMIHQPLGGYQGQATDIQIHAQEILKVKSRMNELMAQHTGKSIEEIER 180
Query: 229 DIDRDRYMSPIEAVEYGIIDGVIDRDS 255
D +RDR++S EA+EYG++D V + S
Sbjct: 181 DTERDRFLSANEALEYGLVDKVYTQRS 207
>gi|297569273|ref|YP_003690617.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
gi|296925188|gb|ADH85998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 134/185 (72%), Gaps = 5/185 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG + D LLKERI+FLG ++D VA+ II+Q+L L+A DP KDI ++N
Sbjct: 10 QTP----RGERSYDIYSRLLKERIIFLGTGVNDDVANVIIAQMLFLEADDPDKDITFYIN 65
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGG ++A +AIYD ++ ++ DV+T+ LG +AS +++L GT+GKR+A+PN+R++IHQP
Sbjct: 66 SPGGVVTAGLAIYDTMRYIKCDVATLCLGQAASMGAVLLAAGTEGKRYALPNSRILIHQP 125
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
MGG GQ D++I A+EI+ + + RI++ TG+S +++QKD +RD +MS E+ YGI
Sbjct: 126 MGGYQGQASDIDIHAKEILRMRQDLNRILASHTGQSIKRIQKDTERDYFMSAEESKTYGI 185
Query: 247 IDGVI 251
ID V+
Sbjct: 186 IDKVL 190
>gi|392551110|ref|ZP_10298247.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
spongiae UST010723-006]
Length = 203
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 127/169 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ I++QLL L++++P KDI +++NSPGGS++A MAIYD ++
Sbjct: 33 LLKERVIFLTGQVEDNMANLIVAQLLFLESENPEKDIFIYINSPGGSVTAGMAIYDTMKF 92
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ ++STV +G +AS + +L GGTKGKRF +PN+RVMIHQP+GG GQ D EI A+EI
Sbjct: 93 IKPNISTVCIGQAASMGAFLLSGGTKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEI 152
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ KD R+++ TG+ E V D DRD +MS +AV+YG++DG++ +
Sbjct: 153 LSIKDKLNRLMAEHTGQPLEVVSNDTDRDNFMSAQQAVDYGLVDGILSQ 201
>gi|423394662|ref|ZP_17371863.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-1]
gi|423405531|ref|ZP_17382680.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-3]
gi|401657444|gb|EJS74954.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-1]
gi|401661147|gb|EJS78617.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-3]
Length = 193
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ +A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPIEVLQRDTDRDNFMTAEKALEYGLIDKI 189
>gi|302386739|ref|YP_003822561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
saccharolyticum WM1]
gi|302197367|gb|ADL04938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
saccharolyticum WM1]
Length = 195
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 118/167 (70%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG + D A +++QLL L+A+DP KDI L++NSPGGS++A MAIYD +
Sbjct: 24 LLKERIIFLGEEVSDVSASLVVAQLLFLEAEDPNKDINLYINSPGGSVTAGMAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVSTV +GM+AS + +L GG KGKRFA+PN VMIHQP GGA GQ ++ I A I
Sbjct: 84 IKCDVSTVCMGMAASMGAFLLAGGAKGKRFALPNAEVMIHQPSGGAKGQATEIRIVAENI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I+S TG+ +E +++D +RD YM+ EA YG+ID +I
Sbjct: 144 LKIKKRLNEILSANTGQPYEVIERDTERDNYMNAEEAKAYGLIDDII 190
>gi|365122664|ref|ZP_09339564.1| ATP-dependent Clp protease proteolytic subunit [Tannerella sp.
6_1_58FAA_CT1]
gi|363642170|gb|EHL81537.1| ATP-dependent Clp protease proteolytic subunit [Tannerella sp.
6_1_58FAA_CT1]
Length = 222
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 127/177 (71%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A+ D L+ +RI+FLG +DD+ A+ I +QLL LD+ DP KDI +++N+PGGS+ A +
Sbjct: 44 AQMDVFSRLMMDRIIFLGTQVDDYTANVIQAQLLYLDSADPGKDISIYLNTPGGSVYAGL 103
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
IYD +Q + +DVST+ GM+AS +++L GT+GKRFA+ ++RVMIHQPMGGA GQ D
Sbjct: 104 GIYDTMQYIASDVSTICTGMAASMGAVLLVAGTRGKRFALQHSRVMIHQPMGGAQGQASD 163
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+EI AREI K II+ +G ++E+V+KD DRD +M+ EA EYG+ID V+ +
Sbjct: 164 IEITAREIQKLKKELYTIIADHSGNTYERVEKDSDRDYWMTAAEAKEYGMIDDVLTK 220
>gi|307250531|ref|ZP_07532475.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857424|gb|EFM89536.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 172
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 125/166 (75%)
Query: 86 LKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLV 145
+KERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIYD + +
Sbjct: 1 MKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFI 60
Query: 146 RADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIM 205
+ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI+
Sbjct: 61 KPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEIL 120
Query: 206 HNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+
Sbjct: 121 KLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 166
>gi|423369117|ref|ZP_17346548.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD142]
gi|401078473|gb|EJP86784.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD142]
Length = 193
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERALEYGLIDKI 189
>gi|163942836|ref|YP_001647720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
weihenstephanensis KBAB4]
gi|228993855|ref|ZP_04153759.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|228999881|ref|ZP_04159453.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|229007435|ref|ZP_04165032.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|229062796|ref|ZP_04200101.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|229135952|ref|ZP_04264713.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229169852|ref|ZP_04297548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|423388590|ref|ZP_17365816.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-3]
gi|423400026|ref|ZP_17377199.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-2]
gi|423416963|ref|ZP_17394052.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|423451604|ref|ZP_17428457.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X1-1]
gi|423462074|ref|ZP_17438870.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X2-1]
gi|423479281|ref|ZP_17455996.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-1]
gi|423484826|ref|ZP_17461515.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-2]
gi|423513410|ref|ZP_17489940.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-1]
gi|423519803|ref|ZP_17496284.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-4]
gi|423595672|ref|ZP_17571702.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD048]
gi|423670666|ref|ZP_17645695.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM034]
gi|423673107|ref|ZP_17648046.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM062]
gi|163865033|gb|ABY46092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|228613566|gb|EEK70695.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228647494|gb|EEL03568.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|228716556|gb|EEL68259.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228753823|gb|EEM03264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228759823|gb|EEM08797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228765911|gb|EEM14561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|401108381|gb|EJQ16312.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|401133929|gb|EJQ41552.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X2-1]
gi|401136677|gb|EJQ44263.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-2]
gi|401145312|gb|EJQ52838.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X1-1]
gi|401157944|gb|EJQ65340.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-4]
gi|401221566|gb|EJR28180.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD048]
gi|401294953|gb|EJS00578.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM034]
gi|401311207|gb|EJS16515.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM062]
gi|401642665|gb|EJS60371.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-3]
gi|401656653|gb|EJS74168.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-2]
gi|402425585|gb|EJV57731.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-1]
gi|402445654|gb|EJV77523.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-1]
Length = 193
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERALEYGLIDKI 189
>gi|403068129|ref|ZP_10909461.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus sp.
Ndiop]
Length = 196
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD V+++I++QLL L+A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPEKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ DVST+ +GM+AS + +L G KGKR+A+PN+ +MIHQP+GG GQ
Sbjct: 73 AGMAIYDTMNFIKPDVSTICIGMAASMGAFLLTAGQKGKRYALPNSEIMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI AR I+ K I++ TG+ E +++D +RD +M+ +VEYG+ID +++R
Sbjct: 133 ATDIEIHARRIIEIKKRMNEIMAEKTGQPLEVIERDTERDNFMTAQASVEYGLIDQILER 192
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 125/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++Q+L L+A+DP KDI L++NSPGG ++A +AIY +
Sbjct: 24 LLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYATMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ TR ++ +G+ FE+V D +RD +MS +EA+EYG+ID V+
Sbjct: 144 LKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
>gi|251790648|ref|YP_003005369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
gi|247539269|gb|ACT07890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
Length = 207
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K +++ TG+ E +++D +RDR++S EAV+YG++D V+
Sbjct: 152 HAKEILKVKARMNELMAKHTGQPLEMIERDTERDRFLSAAEAVDYGLVDSVL 203
>gi|352101155|ref|ZP_08958578.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. HAL1]
gi|350600639|gb|EHA16700.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. HAL1]
Length = 205
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + +G A D LLKER++FL ++D++A+ +++QLL L++++P KDI L++
Sbjct: 14 PMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHLYI 73
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q V+ DVSTV +G +AS +L+L G GKR+ +PN+RVMIHQ
Sbjct: 74 NSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQ 133
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ ++ +I++ TG+ E V +D DRD +MS +A EYG
Sbjct: 134 PLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIETVSRDTDRDNFMSANKATEYG 193
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 194 LIDAVLDK 201
>gi|347542087|ref|YP_004856723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985122|dbj|BAK80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 195
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 126/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FLG+ ++D A I++QLL L+++D KDI L++NSPGGS++A MAIY
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLIVAQLLFLESEDTDKDIHLYINSPGGSITAGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GG GQ D++I
Sbjct: 79 DTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGFRGQATDIDI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+ I+ K++ +I+S TG+ Q++ D++RD ++ EA EYG+ID VI +
Sbjct: 139 HAKRILRMKNDLNKILSENTGKPLSQIELDVERDYFLGSYEAKEYGLIDNVISK 192
>gi|326505348|dbj|BAK03061.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 284
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 104 LFQHRIIRCGGPVEDDMANVIVAQLLYLDAVDPNKDIIMYVNSPGGSVTAGMAIFDTMKH 163
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GGTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 164 IRPDVSTVCIGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 223
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI
Sbjct: 224 LHHKANLNGYLAYHTGQPLDKINVDTDRDFFMSAKEAKEYGLIDGVI 270
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 128/180 (71%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG IDD VA+ I++QLL L+A+DP KDI L++NSPGG ++
Sbjct: 18 RGERAYDIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPGGVVT 77
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DV T+ LG +AS +++L G KGKRFA+P+ R+MIHQP+GG GQ
Sbjct: 78 AGLAIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGFQGQ 137
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+EI+ K I+S TG+S +++KD +RD +MS EA +YG+ID V+ R
Sbjct: 138 ATDIEIHAKEILRLKKMLNEILSKHTGQSLRKIEKDTERDYFMSAEEAQKYGLIDKVLTR 197
>gi|378824294|ref|ZP_09846807.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Sutterella parvirubra YIT 11816]
gi|378596865|gb|EHY30240.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Sutterella parvirubra YIT 11816]
Length = 194
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P ++ RG + D LL++RIVFL +++D A I++QLL L+++DP KDI
Sbjct: 1 MSLVPIVVESSGRGERSFDIYSRLLRDRIVFLNTDVNDQSASLIVAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAI+D ++ +R V+T+ +GM+AS + +L G KGKR+A+P++R+
Sbjct: 61 SLYINSPGGSVSAGMAIFDTMRFIRPKVNTICMGMAASMGAFLLAAGEKGKRYALPHSRI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ DVEI+AR+++ K +++ FTGR+ E++Q+D DRD +MS EA
Sbjct: 121 MIHQPLGGAEGQASDVEIRARQLLLIKRQMNELMAEFTGRTVEELQRDTDRDNFMSAEEA 180
Query: 242 VEYGIIDGVI 251
++YG+ID ++
Sbjct: 181 LKYGLIDEIL 190
>gi|238917377|ref|YP_002930894.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
gi|259585953|sp|C4Z1T6.1|CLPP_EUBE2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238872737|gb|ACR72447.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
Length = 193
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG + D A+ +++Q+L L+A+DP+KDI
Sbjct: 1 MSFVPYVIEQNSRGERSYDIYSRLLKDRIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS+SA AIYD +Q ++ DVST+ +GM+AS + +L GG KGKR A+PN +
Sbjct: 61 HFYINSPGGSVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++ I A I+ ++ I++ TG+S E++ +D +RD YM+ EA
Sbjct: 121 MIHQPSGGARGQETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEA 180
Query: 242 VEYGIIDGVIDR 253
V YG+ID V+++
Sbjct: 181 VAYGLIDSVVEK 192
>gi|16080507|ref|NP_391334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311403|ref|ZP_03593250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315730|ref|ZP_03597535.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320645|ref|ZP_03601939.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324930|ref|ZP_03606224.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313004|ref|YP_004205291.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|384177077|ref|YP_005558462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|402777617|ref|YP_006631561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|418031330|ref|ZP_12669815.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|428281042|ref|YP_005562777.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|430758166|ref|YP_007208041.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449095907|ref|YP_007428398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452912837|ref|ZP_21961465.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
gi|3287962|sp|P80244.3|CLPP_BACSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Stress protein G7
gi|364506085|pdb|3TT7|A Chain A, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506086|pdb|3TT7|B Chain B, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506087|pdb|3TT7|C Chain C, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506088|pdb|3TT7|D Chain D, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506089|pdb|3TT7|E Chain E, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506090|pdb|3TT7|F Chain F, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506091|pdb|3TT7|G Chain G, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|1945673|emb|CAB08043.1| hypothetical protein [Bacillus subtilis]
gi|2635967|emb|CAB15459.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|2668494|gb|AAC46381.1| ClpP [Bacillus subtilis]
gi|291485999|dbj|BAI87074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|320019278|gb|ADV94264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|349596301|gb|AEP92488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|351472389|gb|EHA32502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402482796|gb|AFQ59305.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|407962289|dbj|BAM55529.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|407966303|dbj|BAM59542.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7003]
gi|430022686|gb|AGA23292.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449029822|gb|AGE65061.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452117865|gb|EME08259.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
Length = 197
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP K+I L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++
Sbjct: 133 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 190
>gi|364506078|pdb|3TT6|A Chain A, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506079|pdb|3TT6|B Chain B, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506080|pdb|3TT6|C Chain C, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506081|pdb|3TT6|D Chain D, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506082|pdb|3TT6|E Chain E, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506083|pdb|3TT6|F Chain F, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506084|pdb|3TT6|G Chain G, Structure Of Clpp From Bacillus Subtilis In Compressed
State
Length = 196
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP K+I L++NSPGGS++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 72 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++
Sbjct: 132 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 189
>gi|389806651|ref|ZP_10203698.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
gi|388445303|gb|EIM01383.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
Length = 209
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P RG + D LLKER+VFL ++D VA+ I++Q+L L++++P KDI
Sbjct: 9 LNLVPMVVEQTARGERSYDIYSRLLKERVVFLVGEVNDQVANLIVAQMLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGG+++A +AIYD +Q ++ +VST+ +G + S S +L G KGKRFA+PN+RV
Sbjct: 69 NFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRV 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EIQAREI++ ++ ++ TG++ E+++ D++RDR+MS +A
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYIRERLNKLYVQHTGQTLEKIEADMERDRFMSAADA 188
Query: 242 VEYGIIDGVIDR 253
YG+ID V+D+
Sbjct: 189 KAYGLIDEVLDK 200
>gi|407795375|ref|ZP_11142334.1| ATP-dependent Clp protease proteolytic subunit [Salimicrobium sp.
MJ3]
gi|407020260|gb|EKE32973.1| ATP-dependent Clp protease proteolytic subunit [Salimicrobium sp.
MJ3]
Length = 192
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD V+++I++QLL L A DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSPIDDNVSNSIVAQLLFLAADDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAI+D +Q ++ DVST+ GM+AS + +L GT+GKR+A+PN+ VMIHQP+GG GQ
Sbjct: 73 AGMAIFDTMQFIKPDVSTICTGMAASMGAFLLNAGTEGKRYALPNSEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
D+EI A I+ ++ +I+S TG+ +E +Q+D DRD +M EAV+YG+ID V++
Sbjct: 133 ASDIEIHANRIIRMREKLNKILSERTGQPYEVIQRDTDRDNFMDAHEAVDYGLIDKVME 191
>gi|332160749|ref|YP_004297326.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309498|ref|YP_006005554.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418242377|ref|ZP_12868889.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433550574|ref|ZP_20506618.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica IP 10393]
gi|318604628|emb|CBY26126.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664979|gb|ADZ41623.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859950|emb|CBX70279.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica W22703]
gi|351778211|gb|EHB20378.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789709|emb|CCO69658.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica IP 10393]
Length = 207
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+EI+ K +++ TG+S E++++D +RDR++S EAV+YG++D V R
Sbjct: 152 HAKEILKVKSRMNELMAKHTGKSLEEIERDTERDRFLSADEAVKYGLVDSVFTR 205
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+FLG ++D VA+ +I+QLL L+++DP KDI ++
Sbjct: 5 PMVIEQSSRGERAYDIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDKDINFYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +A+YD +Q +++D++TV +G +AS +L+L G KGKR+A+PN R++IHQ
Sbjct: 65 NSPGGVVTSGLAVYDTMQYIKSDIATVCIGQAASMGALLLTAGAKGKRYALPNARILIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
PMGG GQ D+ IQAREI+ KD I++ TG+ +Q+Q D DRD +MS EA EYG
Sbjct: 125 PMGGFQGQASDIAIQAREILRMKDTLNDILTFHTGKDLKQIQVDTDRDYFMSGKEAEEYG 184
Query: 246 IIDGVI 251
+ID VI
Sbjct: 185 LIDHVI 190
>gi|375111157|ref|ZP_09757368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
jeotgali KCTC 22429]
gi|393762608|ref|ZP_10351235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
agri BL06]
gi|397169840|ref|ZP_10493267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
aestuarii B11]
gi|374568699|gb|EHR39871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
jeotgali KCTC 22429]
gi|392606843|gb|EIW89727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
agri BL06]
gi|396088368|gb|EJI85951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
aestuarii B11]
Length = 201
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++QLL L++++P KDI +++NSPGGS++A ++IY
Sbjct: 24 DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIYIYINSPGGSVTAGLSIY 83
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ D++TV +G +AS + +L GGTKGKR+ +PN RVMIHQP+GG GQ D EI
Sbjct: 84 DTMRYIKPDIATVCVGQAASMGAFLLSGGTKGKRYCLPNARVMIHQPLGGFQGQATDFEI 143
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDS 255
AREI+ K+ R+++ +G+S+EQV KD +RD ++S +A++YG+ID ++ RD+
Sbjct: 144 HAREILSIKEKLNRLMAEHSGKSYEQVCKDTERDNFLSAQQALDYGLIDAILTQRDA 200
>gi|71907348|ref|YP_284935.1| ATP-dependent Clp protease proteolytic subunit [Dechloromonas
aromatica RCB]
gi|110816458|sp|Q47FB6.1|CLPP_DECAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71846969|gb|AAZ46465.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
Length = 209
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER++FL ++D A+ +++QLL L+A++P KDI
Sbjct: 14 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLVVAQLLFLEAENPDKDI 73
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS++A M+IYD +Q ++ DVST+ +G +AS + +L G KGKRFA+PN+RV
Sbjct: 74 YFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRV 133
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+ I A+EI+ +D RI++ +G+ E+++KD DRD ++S EA
Sbjct: 134 MIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEA 193
Query: 242 VEYGIIDGVIDR 253
EYG+ID V+ R
Sbjct: 194 AEYGLIDKVLTR 205
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERIVFLG + D A+ I++QLL L+A+DP KDI L++
Sbjct: 3 PTVIETSGRGERAFDIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + I+D + +R DVST+ +G++AS + +L GTKGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K + ++ TG+ +++ +D +RD +MS +A+EYG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGQPLDKIAEDTERDFFMSAEDALEYG 182
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 183 LIDQVINR 190
>gi|58337015|ref|YP_193600.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus NCFM]
gi|227903577|ref|ZP_04021382.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus ATCC 4796]
gi|67460152|sp|Q5FL55.1|CLPP_LACAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58254332|gb|AAV42569.1| ATP-dependent Clp protease P [Lactobacillus acidophilus NCFM]
gi|227868464|gb|EEJ75885.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus ATCC 4796]
Length = 195
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ I+ TG+ E++QKD +RD Y++ EA EYG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDEIM 189
>gi|91783520|ref|YP_558726.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
xenovorans LB400]
gi|187923896|ref|YP_001895538.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
phytofirmans PsJN]
gi|385209690|ref|ZP_10036558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
gi|116243110|sp|Q13Z15.1|CLPP2_BURXL RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|91687474|gb|ABE30674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
xenovorans LB400]
gi|187715090|gb|ACD16314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phytofirmans PsJN]
gi|385182028|gb|EIF31304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
Length = 217
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TL Q + L P T+ RG + D LLKERIVFL ++D A+ +++
Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
Q+L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 70 QMLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG++D V
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQV 212
>gi|448747538|ref|ZP_21729195.1| Peptidase S14/S49 [Halomonas titanicae BH1]
gi|445564818|gb|ELY20933.1| Peptidase S14/S49 [Halomonas titanicae BH1]
Length = 205
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + +G A D LLKER++FL ++D++A+ +++QLL L++++P KDI L++
Sbjct: 14 PMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHLYI 73
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q V+ DVSTV +G +AS +L+L G GKR+ +PN+RVMIHQ
Sbjct: 74 NSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQ 133
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ ++ +I++ TG+ E V +D DRD +MS +A EYG
Sbjct: 134 PLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQEIEAVSRDTDRDNFMSANQAKEYG 193
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 194 LIDAVLDK 201
>gi|29375364|ref|NP_814518.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis V583]
gi|227517733|ref|ZP_03947782.1| ATP-dependent Clp protease proteolytic subunit, partial
[Enterococcus faecalis TX0104]
gi|229546606|ref|ZP_04435331.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX1322]
gi|229548713|ref|ZP_04437438.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis ATCC 29200]
gi|255971227|ref|ZP_05421813.1| peptidase S14 [Enterococcus faecalis T1]
gi|255973850|ref|ZP_05424436.1| peptidase S14, partial [Enterococcus faecalis T2]
gi|256617656|ref|ZP_05474502.1| peptidase S14 [Enterococcus faecalis ATCC 4200]
gi|256761537|ref|ZP_05502117.1| peptidase S14 [Enterococcus faecalis T3]
gi|256957363|ref|ZP_05561534.1| peptidase S14 [Enterococcus faecalis DS5]
gi|256959901|ref|ZP_05564072.1| peptidase S14 [Enterococcus faecalis Merz96]
gi|256964395|ref|ZP_05568566.1| peptidase S14 [Enterococcus faecalis HIP11704]
gi|257083692|ref|ZP_05578053.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis Fly1]
gi|257086127|ref|ZP_05580488.1| peptidase S14 [Enterococcus faecalis D6]
gi|257089198|ref|ZP_05583559.1| peptidase S14 [Enterococcus faecalis CH188]
gi|257415340|ref|ZP_05592334.1| peptidase S14 [Enterococcus faecalis ARO1/DG]
gi|257418377|ref|ZP_05595371.1| peptidase S14 [Enterococcus faecalis T11]
gi|257421026|ref|ZP_05598016.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis X98]
gi|293384732|ref|ZP_06630586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis R712]
gi|293387456|ref|ZP_06632008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis S613]
gi|294781490|ref|ZP_06746829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis PC1.1]
gi|300859735|ref|ZP_07105823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TUSoD Ef11]
gi|307269823|ref|ZP_07551153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4248]
gi|307272582|ref|ZP_07553835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0855]
gi|307276252|ref|ZP_07557380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2134]
gi|307284467|ref|ZP_07564629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0860]
gi|307289536|ref|ZP_07569481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0109]
gi|307296208|ref|ZP_07576036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0411]
gi|312900365|ref|ZP_07759676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0470]
gi|312904208|ref|ZP_07763370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0635]
gi|312908569|ref|ZP_07767512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 512]
gi|312910494|ref|ZP_07769339.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 516]
gi|312951861|ref|ZP_07770750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0102]
gi|384512469|ref|YP_005707562.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis OG1RF]
gi|384517831|ref|YP_005705136.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis 62]
gi|397699164|ref|YP_006536952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis D32]
gi|421512787|ref|ZP_15959583.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis ATCC 29212]
gi|422685410|ref|ZP_16743629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4000]
gi|422688965|ref|ZP_16747088.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0630]
gi|422692096|ref|ZP_16750121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0031]
gi|422694420|ref|ZP_16752412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4244]
gi|422696726|ref|ZP_16754678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1346]
gi|422700713|ref|ZP_16758556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1342]
gi|422703915|ref|ZP_16761731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1302]
gi|422707849|ref|ZP_16765386.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0043]
gi|422709385|ref|ZP_16766841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0027]
gi|422713710|ref|ZP_16770459.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0309A]
gi|422718317|ref|ZP_16774980.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0309B]
gi|422721281|ref|ZP_16777875.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0017]
gi|422724241|ref|ZP_16780720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2137]
gi|422725064|ref|ZP_16781533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0312]
gi|422727912|ref|ZP_16784333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0012]
gi|422732049|ref|ZP_16788395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0645]
gi|422736270|ref|ZP_16792534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1341]
gi|422738898|ref|ZP_16794084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2141]
gi|422867209|ref|ZP_16913809.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis TX1467]
gi|424672010|ref|ZP_18108993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis 599]
gi|424679044|ref|ZP_18115877.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV103]
gi|424679618|ref|ZP_18116438.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV116]
gi|424685469|ref|ZP_18122166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV129]
gi|424688048|ref|ZP_18124665.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV25]
gi|424691566|ref|ZP_18128088.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV31]
gi|424694765|ref|ZP_18131153.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV37]
gi|424698749|ref|ZP_18135024.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV41]
gi|424702312|ref|ZP_18138474.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV62]
gi|424705663|ref|ZP_18141691.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV63]
gi|424706886|ref|ZP_18142882.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV65]
gi|424718089|ref|ZP_18147354.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV68]
gi|424722477|ref|ZP_18151531.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV72]
gi|424725522|ref|ZP_18154212.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV73]
gi|424726847|ref|ZP_18155496.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV81]
gi|424742275|ref|ZP_18170598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV85]
gi|424754816|ref|ZP_18182712.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV93]
gi|424760422|ref|ZP_18188050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis R508]
gi|428766295|ref|YP_007152406.1| ATP-dependent Clp protease, proteolytic subunit [Enterococcus
faecalis str. Symbioflor 1]
gi|430359459|ref|ZP_19425814.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis OG1X]
gi|430371311|ref|ZP_19429351.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis M7]
gi|60389766|sp|Q837R0.1|CLPP_ENTFA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29342824|gb|AAO80588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis V583]
gi|227074814|gb|EEI12777.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX0104]
gi|229306150|gb|EEN72146.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis ATCC 29200]
gi|229308263|gb|EEN74250.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX1322]
gi|255962245|gb|EET94721.1| peptidase S14 [Enterococcus faecalis T1]
gi|255966722|gb|EET97344.1| peptidase S14 [Enterococcus faecalis T2]
gi|256597183|gb|EEU16359.1| peptidase S14 [Enterococcus faecalis ATCC 4200]
gi|256682788|gb|EEU22483.1| peptidase S14 [Enterococcus faecalis T3]
gi|256947859|gb|EEU64491.1| peptidase S14 [Enterococcus faecalis DS5]
gi|256950397|gb|EEU67029.1| peptidase S14 [Enterococcus faecalis Merz96]
gi|256954891|gb|EEU71523.1| peptidase S14 [Enterococcus faecalis HIP11704]
gi|256991722|gb|EEU79024.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis Fly1]
gi|256994157|gb|EEU81459.1| peptidase S14 [Enterococcus faecalis D6]
gi|256998010|gb|EEU84530.1| peptidase S14 [Enterococcus faecalis CH188]
gi|257157168|gb|EEU87128.1| peptidase S14 [Enterococcus faecalis ARO1/DG]
gi|257160205|gb|EEU90165.1| peptidase S14 [Enterococcus faecalis T11]
gi|257162850|gb|EEU92810.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis X98]
gi|291077982|gb|EFE15346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis R712]
gi|291083107|gb|EFE20070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis S613]
gi|294451420|gb|EFG19883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis PC1.1]
gi|295114015|emb|CBL32652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterococcus
sp. 7L76]
gi|300850553|gb|EFK78302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TUSoD Ef11]
gi|306496082|gb|EFM65664.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0411]
gi|306499497|gb|EFM68869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0109]
gi|306503144|gb|EFM72398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0860]
gi|306507052|gb|EFM76194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2134]
gi|306510867|gb|EFM79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0855]
gi|306513933|gb|EFM82535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4248]
gi|310625455|gb|EFQ08738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 512]
gi|310630159|gb|EFQ13442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0102]
gi|310632304|gb|EFQ15587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0635]
gi|311289190|gb|EFQ67746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 516]
gi|311292553|gb|EFQ71109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0470]
gi|315025732|gb|EFT37664.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2137]
gi|315029868|gb|EFT41800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4000]
gi|315031465|gb|EFT43397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0017]
gi|315036148|gb|EFT48080.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0027]
gi|315145272|gb|EFT89288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2141]
gi|315148132|gb|EFT92148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4244]
gi|315151531|gb|EFT95547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0012]
gi|315153193|gb|EFT97209.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0031]
gi|315154911|gb|EFT98927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0043]
gi|315160005|gb|EFU04022.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0312]
gi|315161970|gb|EFU05987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0645]
gi|315164639|gb|EFU08656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1302]
gi|315166938|gb|EFU10955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1341]
gi|315170665|gb|EFU14682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1342]
gi|315174680|gb|EFU18697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1346]
gi|315573467|gb|EFU85658.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0309B]
gi|315578035|gb|EFU90226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0630]
gi|315581428|gb|EFU93619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0309A]
gi|323479964|gb|ADX79403.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis 62]
gi|327534358|gb|AEA93192.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis OG1RF]
gi|329577643|gb|EGG59074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis TX1467]
gi|397335803|gb|AFO43475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis D32]
gi|401674124|gb|EJS80486.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis ATCC 29212]
gi|402349635|gb|EJU84568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV103]
gi|402356118|gb|EJU90860.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV116]
gi|402357455|gb|EJU92163.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis 599]
gi|402358708|gb|EJU93371.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV129]
gi|402361875|gb|EJU96420.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV31]
gi|402361979|gb|EJU96520.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV25]
gi|402369652|gb|EJV03923.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV37]
gi|402369758|gb|EJV04020.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV62]
gi|402371015|gb|EJV05193.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV41]
gi|402378766|gb|EJV12595.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV63]
gi|402382793|gb|EJV16432.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV68]
gi|402386667|gb|EJV20168.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV65]
gi|402388379|gb|EJV21821.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV72]
gi|402391546|gb|EJV24848.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV73]
gi|402398292|gb|EJV31244.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV81]
gi|402400578|gb|EJV33395.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV85]
gi|402402171|gb|EJV34900.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis ERV93]
gi|402403673|gb|EJV36334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis R508]
gi|427184468|emb|CCO71692.1| ATP-dependent Clp protease, proteolytic subunit [Enterococcus
faecalis str. Symbioflor 1]
gi|429513349|gb|ELA02934.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis OG1X]
gi|429515108|gb|ELA04633.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis M7]
Length = 197
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L IDD VA+++I+QLL LDAQD KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA +AI+D + V+ADV T+ LGM+AS S +L G KGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ + I++ TG+ E +++D DRD YM+ +A EYG
Sbjct: 125 PLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYG 184
Query: 246 IIDGVIDRDS 255
+ID V++ S
Sbjct: 185 LIDEVMENSS 194
>gi|386760068|ref|YP_006233285.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
gi|384933351|gb|AFI30029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
Length = 196
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP K+I L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++
Sbjct: 133 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 190
>gi|227877204|ref|ZP_03995278.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus JV-V01]
gi|227893204|ref|ZP_04011009.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
ultunensis DSM 16047]
gi|256842758|ref|ZP_05548246.1| Clp protease [Lactobacillus crispatus 125-2-CHN]
gi|256848932|ref|ZP_05554366.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus MV-1A-US]
gi|262045725|ref|ZP_06018689.1| Clp protease [Lactobacillus crispatus MV-3A-US]
gi|293380203|ref|ZP_06626285.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus 214-1]
gi|295692558|ref|YP_003601168.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
crispatus ST1]
gi|312977722|ref|ZP_07789469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus CTV-05]
gi|385814208|ref|YP_005850601.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus H10]
gi|423317935|ref|ZP_17295832.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus FB049-03]
gi|423321275|ref|ZP_17299147.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus FB077-07]
gi|227863258|gb|EEJ70703.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus JV-V01]
gi|227864973|gb|EEJ72394.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
ultunensis DSM 16047]
gi|256614178|gb|EEU19379.1| Clp protease [Lactobacillus crispatus 125-2-CHN]
gi|256714471|gb|EEU29458.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus MV-1A-US]
gi|260573684|gb|EEX30240.1| Clp protease [Lactobacillus crispatus MV-3A-US]
gi|290923247|gb|EFE00168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus 214-1]
gi|295030664|emb|CBL50143.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus ST1]
gi|310895461|gb|EFQ44528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus CTV-05]
gi|323466927|gb|ADX70614.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus H10]
gi|405596271|gb|EKB69616.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus FB077-07]
gi|405597314|gb|EKB70587.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus FB049-03]
Length = 194
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ I+ TG+ E++QKD +RD Y++ EA EYG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDEIM 189
>gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1
gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1
gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1
gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1
gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1
gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1
gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1
gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
Length = 199
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP K+I L++NSPGGS++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 72 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++
Sbjct: 132 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 189
>gi|161507214|ref|YP_001577168.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus DPC 4571]
gi|172048207|sp|A8YUD9.1|CLPP_LACH4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160348203|gb|ABX26877.1| ATP-dependent Clp protease P [Lactobacillus helveticus DPC 4571]
Length = 194
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQP+GGA GQ
Sbjct: 72 SGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D++I A EI+ ++ I+ TG+ E++QKD +RD Y++ EA EYG+ID ++
Sbjct: 132 QTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYGLIDEIM 189
>gi|300087790|ref|YP_003758312.1| endopeptidase Clp [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527523|gb|ADJ25991.1| Endopeptidase Clp [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 205
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG + D LLLKERIVFLG I+D VA+ II+QLL LD +DP KDI L++
Sbjct: 12 PMVIESSSRGERSFDIYSLLLKERIVFLGTEINDQVANTIIAQLLFLDREDPDKDISLYI 71
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
+SPGG +SA +AIYD +QL+R VST+ +GM+AS A+++L G KGKRFA+PN+ + +HQ
Sbjct: 72 HSPGGVISAGLAIYDTIQLIRPKVSTICVGMAASMATVLLCAGAKGKRFALPNSTIHMHQ 131
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
+GGA GQ D+ IQA+EI +D I++ TG+ +++ D DRD Y++P++A EYG
Sbjct: 132 AIGGARGQASDIVIQAKEITRLQDIIRDILAARTGQPLDKIIHDTDRDYYLNPVQAKEYG 191
Query: 246 IIDGVIDR 253
+ID ++ +
Sbjct: 192 LIDDILKK 199
>gi|223973663|gb|ACN31019.1| unknown [Zea mays]
Length = 280
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DPTKDI ++VNSPGGS++A MAI+D ++
Sbjct: 100 LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDIIMYVNSPGGSVTAGMAIFDTMKH 159
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 160 IRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 219
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI + + L P+P
Sbjct: 220 LHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVI-MNPLKALQPLP 277
>gi|145219256|ref|YP_001129965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
gi|189082462|sp|A4SDA4.1|CLPP_PROVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145205420|gb|ABP36463.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
Length = 225
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 138/203 (67%), Gaps = 7/203 (3%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P T+ RG A D LL+ERI+FLG+ ID+ VA I++QL+ L+++DP +DI
Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPDRDIF 86
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
++VNSPGGS+SA + IYD +Q +R DVSTV +GM+AS + +L G KGKR ++P++R+M
Sbjct: 87 IYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIM 146
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP GGA GQ D+ IQAREI + I++ TG+ +QV++D +RDR+M EA+
Sbjct: 147 IHQPSGGAQGQESDIIIQAREIEKIRRLLEEIMAKHTGKDVQQVREDSERDRWMDAGEAL 206
Query: 243 EYGIIDGVIDRDSIIPLVPVPEK 265
EYGIID V ++ P PEK
Sbjct: 207 EYGIIDQVFEKR------PAPEK 223
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
Length = 196
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 127/172 (73%), Gaps = 1/172 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++QLL L+++DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+P+ RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGAKGKRFALPHARVMIHQPLGGARGQATDIQIQAQEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDS 255
+ K+ TR ++ +G+ FE+V D +RD +MS EA EYG+ID V+ RD+
Sbjct: 144 LKLKEMLTRRMAEHSGQPFEKVAADTERDNFMSAFEAAEYGLIDKVLTHRDT 195
>gi|237653230|ref|YP_002889544.1| ATP-dependent Clp protease proteolytic subunit [Thauera sp. MZ1T]
gi|237624477|gb|ACR01167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thauera sp.
MZ1T]
Length = 212
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
Query: 53 QQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLL 111
Q + V L P + RG A D LLKER+VFL ++D A+ I++QLL
Sbjct: 7 QHSSDWNPVGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLF 66
Query: 112 LDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKG 171
L++++P KDI ++NSPGGS++A MAIYD +Q ++ +VST+ +G +AS + +L G KG
Sbjct: 67 LESENPDKDIYFYINSPGGSVTAGMAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKG 126
Query: 172 KRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDID 231
KRF +PN+RVMIHQP+GG GQ D+EI AREI++ + ++S TG++ E+++KD D
Sbjct: 127 KRFILPNSRVMIHQPLGGFQGQASDIEIHAREILYLRSRLNDMLSKHTGQALERIEKDTD 186
Query: 232 RDRYMSPIEAVEYGIIDGVI 251
RD +MS AVEYG++D V+
Sbjct: 187 RDNFMSATAAVEYGLVDKVL 206
>gi|254282219|ref|ZP_04957187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
gi|219678422|gb|EED34771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
Length = 220
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 132/179 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++F+ I+D +A+ I++QLL L++++P KDI +++NSPGGS++A ++IY
Sbjct: 40 DIYSRLLKERVIFVVGGIEDHMANLIVAQLLFLESENPDKDIHIYINSPGGSVTAGLSIY 99
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ DVST+ +G +AS + +L GG KGKR+ +PN R MIHQP GGA GQ D+EI
Sbjct: 100 DTMQFVKPDVSTMCIGQAASMGAFLLSGGAKGKRYILPNARTMIHQPSGGAQGQASDIEI 159
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIP 258
QA+EI++ ++ R+++ TG++ E +++D +RDR+MS ++VEYG++D V++ P
Sbjct: 160 QAKEILYLRERLNRLMADHTGQTLETIERDTERDRFMSAEQSVEYGLVDEVVENRVAAP 218
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERIVF+G ID+ VA+ +I+QLL L+A+DP KDI L++NSPGG ++A +AIY
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPGGLVTAGLAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DV T+ +G +AS A+++L GTKGKR+A+ ++R+M+HQP+G GQ +VEI
Sbjct: 80 DTIQYIKPDVCTICVGQAASMAAVLLAAGTKGKRYALRHSRIMLHQPIGAFQGQATEVEI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI+ ++ T I+S TG+ E++++D +RD YMS EA+EYGIID ++
Sbjct: 140 QAKEILRLREIITEILSQHTGQPKEKIKQDTERDFYMSAEEALEYGIIDKIL 191
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG ++D A +++QLL L+A+DP KDI
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ +
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+ I A I+ KD I+S TG+ E ++KD++RD +M EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDDVI 190
>gi|313891581|ref|ZP_07825191.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
gi|313120040|gb|EFR43222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
Length = 199
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 129/177 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FL I+D +A+ II+QLL L+A+DP KDI L++NSPGG ++A MAIY
Sbjct: 19 DIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DVST+ +G AS A+++L G KGKRFA+P++ VMIHQP+GG GQ ++EI
Sbjct: 79 DTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMIHQPLGGVQGQATEIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
AREI+ +D I++ TG+S + ++KD +RD +M+ A++YG+ID ++ R+ +
Sbjct: 139 HAREILRLRDELNGILAKHTGQSLDVIKKDTERDNFMTAENALKYGLIDKILTRNEL 195
>gi|170692395|ref|ZP_02883558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307729638|ref|YP_003906862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323526047|ref|YP_004228200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|170142825|gb|EDT10990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307584173|gb|ADN57571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323383049|gb|ADX55140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 217
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TL Q + L P T+ RG + D LLKERIVFL ++D A+ +++
Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
Q+L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 70 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIA 189
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG++D V
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQV 212
>gi|256854365|ref|ZP_05559729.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis T8]
gi|256709925|gb|EEU24969.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis T8]
Length = 196
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L IDD VA+++I+QLL LDAQD KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA +AI+D + V+ADV T+ LGM+AS S +L G KGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ + I++ TG+ E +++D DRD YM+ +A EYG
Sbjct: 125 PLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYG 184
Query: 246 IIDGVIDRDS 255
+ID V++ S
Sbjct: 185 LIDEVMENSS 194
>gi|403515400|ref|YP_006656220.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
helveticus R0052]
gi|403080838|gb|AFR22416.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
helveticus R0052]
Length = 193
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ I+ TG+ E++QKD +RD Y++ EA EYG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDEIM 189
>gi|397643686|gb|EJK76020.1| hypothetical protein THAOC_02238 [Thalassiosira oceanica]
Length = 221
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 134/195 (68%), Gaps = 1/195 (0%)
Query: 70 PATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPG 129
P + D + LLK+RI+ LG +++D +A+ +++QLL L +DP KDI +++NSPG
Sbjct: 23 PTVGSDSGQLDVVSRLLKDRILLLGTDVNDEMANVLVAQLLYLANEDPEKDITIYINSPG 82
Query: 130 GSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGG 189
GS+SA +AIYD +Q + DV TV GM+AS + +LG G GKR ++PN R+MIHQP+GG
Sbjct: 83 GSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARIMIHQPLGG 142
Query: 190 ASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDG 249
A GQ D+EIQA+EI+ K + I+ + + E++++D DRD +M+P EA++YGIID
Sbjct: 143 AQGQAADIEIQAKEILFVKACLNKYIAQYCDQPVEKIEEDTDRDFFMTPTEAMDYGIIDE 202
Query: 250 VID-RDSIIPLVPVP 263
VI + S IPL +P
Sbjct: 203 VIKTKTSHIPLPNMP 217
>gi|224068558|ref|XP_002302770.1| predicted protein [Populus trichocarpa]
gi|222844496|gb|EEE82043.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 140/206 (67%), Gaps = 13/206 (6%)
Query: 58 QHDVPLSSAPQTPATAMRGAEADA------------MGLLLKERIVFLGNNIDDFVADAI 105
+ D+ + S+P PA A GA+ + L + RI+ G +DD +A+ I
Sbjct: 79 REDLQIPSSPFFPAYA-NGAQGQGPPPMVHERFQSVISQLFQHRIIRCGGAVDDDMANII 137
Query: 106 ISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLIL 165
++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++ +R DVSTV +G++AS + +L
Sbjct: 138 VAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 197
Query: 166 GGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQ 225
GTKGKR+++PN+R+MIHQP+GGA G D++IQA E++H+K N ++ TG+S E+
Sbjct: 198 SAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTGQSLEK 257
Query: 226 VQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ +D DRD +MS EA +YG+IDGVI
Sbjct: 258 INQDTDRDYFMSAKEAKDYGLIDGVI 283
>gi|445496993|ref|ZP_21463848.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Janthinobacterium sp. HH01]
gi|444786988|gb|ELX08536.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Janthinobacterium sp. HH01]
Length = 208
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++F+ ++D +A+ I++QLL L++++P KDI L++NSPGGS+SA +AI+D +Q
Sbjct: 38 LLKERVIFMVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGLAIFDTMQF 97
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ GM+AS + +L G KGKRF++PN+R+MIHQP GG+ G D+EIQA+EI
Sbjct: 98 IKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGSQGMASDIEIQAKEI 157
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ + I++ TG+S EQ+ KD DRDR+MS EAVEYG+ID ++
Sbjct: 158 LYLRHRLNSIMAERTGQSVEQIAKDTDRDRFMSAEEAVEYGLIDKML 204
>gi|357112555|ref|XP_003558074.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like [Brachypodium distachyon]
Length = 282
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 102 LFQHRIIRCGGPVEDDMANVIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKH 161
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GGTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 162 IRPDVSTVCIGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 221
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI + + L P+P
Sbjct: 222 LHHKANLNGYLAYHTGQPLDKINVDTDRDFFMSAKEAKEYGLIDGVI-MNPLKALQPLP 279
>gi|291463558|pdb|3KTG|A Chain A, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463559|pdb|3KTG|B Chain B, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463560|pdb|3KTG|C Chain C, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463561|pdb|3KTG|D Chain D, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463562|pdb|3KTG|E Chain E, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463563|pdb|3KTG|F Chain F, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463564|pdb|3KTG|G Chain G, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463565|pdb|3KTH|A Chain A, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463566|pdb|3KTH|B Chain B, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463567|pdb|3KTH|C Chain C, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463568|pdb|3KTH|D Chain D, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463569|pdb|3KTH|E Chain E, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463570|pdb|3KTH|F Chain F, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463571|pdb|3KTH|G Chain G, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
Length = 199
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L A+DP K+I L++NSPGGS++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 72 AGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID ++
Sbjct: 132 ATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 189
>gi|430750770|ref|YP_007213678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430734735|gb|AGA58680.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 198
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 127/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ IDD VA+ +I+QLL L A+DP KDI L++NSPGGS++A + IY
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDDVANLVIAQLLFLAAEDPEKDIYLYINSPGGSVTAGLGIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G++AS ASL+L G KGKR+A+PN+ VMIHQP+GG GQ D++I
Sbjct: 79 DTMQYIKPDVSTICVGIAASMASLLLTAGAKGKRYALPNSEVMIHQPLGGVRGQAADIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A I+ K +I TG+ +E++++D DRD +MS EA+ YG+ID VI R
Sbjct: 139 HADWILKTKHKLNQIYVERTGQPYEKIERDTDRDFFMSAEEALAYGLIDKVITR 192
>gi|407713410|ref|YP_006833975.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235594|gb|AFT85793.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 211
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
TL Q + L P T+ RG + D LLKERIVFL ++D A+ +++
Sbjct: 4 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 63
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
Q+L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L
Sbjct: 64 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 123
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRFA+PN+RVMIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++
Sbjct: 124 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIA 183
Query: 228 KDIDRDRYMSPIEAVEYGIIDGV 250
+D DRD +MS +A YG++D V
Sbjct: 184 RDTDRDNFMSGDDAQAYGLVDQV 206
>gi|253990891|ref|YP_003042247.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
gi|253782341|emb|CAQ85505.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
Length = 207
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 135/198 (68%), Gaps = 2/198 (1%)
Query: 56 QRQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+R VP ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+
Sbjct: 6 KRDQYVPHMALVPMVIEQTARGERSFDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G +GKR
Sbjct: 66 AENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAEGKR 125
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
F +PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+S E+++KD +RD
Sbjct: 126 FCLPNSRVMIHQPLGGFQGQASDIEIHAQEILKVKGRMNSLMAKHTGKSLEEIEKDTERD 185
Query: 234 RYMSPIEAVEYGIIDGVI 251
R++S EAVEYG++D +
Sbjct: 186 RFLSASEAVEYGLVDKIF 203
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+G I+D VA+ +I+QLL L +DP KDI +++NSPGG +S+ +AIY
Sbjct: 19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPGGMVSSGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ D++T +G ++S A ++L GTKGKRFA+P++RVMIHQP+GG GQ DVEI
Sbjct: 79 DTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGFYGQATDVEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ KD I++ TG+ E++QKD +RD +MS EA YGI+D VI
Sbjct: 139 HAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAKLYGIVDEVI 190
>gi|154506030|ref|ZP_02042768.1| hypothetical protein RUMGNA_03572 [Ruminococcus gnavus ATCC 29149]
gi|336433385|ref|ZP_08613205.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_58FAA]
gi|153793529|gb|EDN75949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus gnavus ATCC 29149]
gi|336016316|gb|EGN46103.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 193
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 119/169 (70%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG ++D A I++QLL L+A DP KDI+L++NSPGGS++A +AIYD +Q
Sbjct: 24 LLKERIIFLGEEVNDVSASVIVAQLLFLEADDPNKDIQLYINSPGGSVTAGLAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVSTV +GM+AS + +L GG KGKRFA+PN +MIHQP GGA GQ ++ I A I
Sbjct: 84 IKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEIMIHQPSGGAQGQATEISIAAEHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ + I++ TG+ E ++ D +RD +MS EA YG+ID VI +
Sbjct: 144 LRTRQKLNEIMAANTGQPLETIKADTERDNFMSAEEAKAYGLIDEVIAK 192
>gi|313885801|ref|ZP_07819544.1| endopeptidase Clp [Porphyromonas asaccharolytica PR426713P-I]
gi|312924705|gb|EFR35471.1| endopeptidase Clp [Porphyromonas asaccharolytica PR426713P-I]
Length = 238
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 126/175 (72%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A+ D L+ +RI+FLG ++D+ A+ I +QLL LD DP KDI +++NSPGGS+ A
Sbjct: 47 AQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPGGSVYAGF 106
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
IYD +Q V DVST+ GM+AS A+++L G +GKR+A+P++RVMIHQPMGG GQ D
Sbjct: 107 GIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQPMGGMQGQASD 166
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+EI A+EI+ K +II+ +GRS E +++D DRD++M+ EA+EYG+ID V+
Sbjct: 167 IEIAAKEILKVKAELYKIIADHSGRSVEDIERDSDRDKWMTASEALEYGMIDKVL 221
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 125/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +I+Q+L L+A+DP KDI L++NSPGG +++ +AIYD +
Sbjct: 25 LLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPDKDIYLYINSPGGVITSGLAIYDTMNY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS A+++L G KGKRFA+PN R+MIHQP+GG GQ D+EI A EI
Sbjct: 85 IKPDVSTICIGQAASMAAVLLSSGAKGKRFALPNARIMIHQPLGGFQGQAKDIEIHANEI 144
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K I+S TG+ E+++ D DRD +MS +EA EYG+ID I++
Sbjct: 145 LRMKKMLNEILSKNTGQPIEKIEMDSDRDFFMSAMEAKEYGLIDDCIEK 193
>gi|407781586|ref|ZP_11128804.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
gi|407207803|gb|EKE77734.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
Length = 214
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 130/183 (71%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLKERI+FL + D V+ I +QLL L++++PTKDI L++NSPGG ++
Sbjct: 25 RGERAYDIYSRLLKERIIFLTGQVHDGVSSLICAQLLFLESENPTKDIALYINSPGGVVT 84
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +A+YD +Q +R DVST+ +G +AS SL+L G KGKRF +P++RVM+HQP GGA GQ
Sbjct: 85 SGLAMYDTMQYIRPDVSTLCIGQAASMGSLLLTAGAKGKRFCLPHSRVMVHQPSGGAQGQ 144
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+ + RI + TG+ E+++K ++RDR+MS EA +G+ID V+ R
Sbjct: 145 ATDIEIQAREILSIRARLNRIYADHTGQPIEEIEKTLERDRFMSAEEAKNFGLIDEVVSR 204
Query: 254 DSI 256
+I
Sbjct: 205 RAI 207
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RIVF+G I+D VA+ II+QLL L+A+DP KDI L++NSPGG ++
Sbjct: 14 RGERAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIHLYINSPGGLVT 73
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ MAIYD +Q +R DVST+ LG +AS + +L GT GKRFA+P R+M+HQP+GG GQ
Sbjct: 74 SGMAIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRFALPYARIMMHQPLGGVQGQ 133
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+++I AREI+ K +++ TG+ E++++D +RD +MSP +A EYGIID VI
Sbjct: 134 ATEIDIHAREILRTKRVLNELLAKHTGQPVEKIERDTERDFFMSPEQAREYGIIDEVI 191
>gi|374997740|ref|YP_004973239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
gi|357216106|gb|AET70724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
Length = 204
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +++Q+L L+A+DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 25 LLKDRIIFLGGAIDDDVANLVVAQMLFLEAEDPEKDINLYINSPGGSITAGMAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM---GGASGQVLDVEIQA 201
+R+DV T+ +GM+AS + +L G KGKR A+PN V+IHQP+ G SGQ ++EI A
Sbjct: 85 IRSDVRTICIGMAASMGAFLLASGAKGKRAALPNAEVLIHQPLIGGHGLSGQATEIEIHA 144
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++++ +D RI++ TG+ E+++KD DRD YM+ EA EYGIID V ++
Sbjct: 145 KQLLRTRDKMNRILAERTGQPLEKIEKDTDRDYYMTAGEAKEYGIIDQVYEK 196
>gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
Length = 208
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 130/167 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+F+ ++D +A+AI++QLL LDAQD KDI +++NSPGG ++A +AIYD ++
Sbjct: 42 LLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPGGVITAGLAIYDTMRH 101
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+++DVSTV +G +AS +++L G KGKR+++PN+R+MIHQP+GGA GQ D++IQA+EI
Sbjct: 102 IKSDVSTVCVGQAASMGAVLLAAGAKGKRYSLPNSRIMIHQPLGGARGQATDIQIQAKEI 161
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K+ ++I+S TG+S E++ D +RD +MSP EAV YG+ID ++
Sbjct: 162 ERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 208
>gi|37523335|ref|NP_926712.1| ATP-dependent Clp protease proteolytic subunit [Gloeobacter
violaceus PCC 7421]
gi|60389714|sp|Q7NEW2.1|CLPP1_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|35214339|dbj|BAC91707.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +RI+FLG +DD +A+AII+ +L LD++DP KDI L++NSPGGS+SA +AIY
Sbjct: 21 DIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIY 80
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q VRADV+T+ +G++AS S +L G KGKR ++P++R+MIHQP+GGA GQ D+ I
Sbjct: 81 DTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGI 140
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+EI++ KD +I+S TG+ E++++D DRD +MS +A +YG+ID V+
Sbjct: 141 QAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQYGLIDQVV 192
>gi|357511379|ref|XP_003625978.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355500993|gb|AES82196.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 301
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 134/190 (70%)
Query: 62 PLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
P+ + Q P ++ + L + RI+ G +DD +A+ I+SQLL LDA DP+KDI
Sbjct: 90 PVHAQGQGPPPMVQERFQSVISQLFQYRIIRCGGPVDDDMANIIVSQLLYLDAVDPSKDI 149
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++VNSPGGS++A MAI+D ++ +R DVSTV +G++AS + +L GTKGKR+++PN+R+
Sbjct: 150 VMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRI 209
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG G D++IQA E++H+K N +S TG+S E++ +D DRD +MS EA
Sbjct: 210 MIHQPLGGFQGGQTDIDIQANEMLHHKANLNGYLSYQTGQSLEKINQDTDRDFFMSAKEA 269
Query: 242 VEYGIIDGVI 251
EYG+IDGVI
Sbjct: 270 KEYGLIDGVI 279
>gi|332300233|ref|YP_004442154.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
asaccharolytica DSM 20707]
gi|332177296|gb|AEE12986.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
asaccharolytica DSM 20707]
Length = 238
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 126/175 (72%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
A+ D L+ +RI+FLG ++D+ A+ I +QLL LD DP KDI +++NSPGGS+ A
Sbjct: 47 AQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPGGSVYAGF 106
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
IYD +Q V DVST+ GM+AS A+++L G +GKR+A+P++RVMIHQPMGG GQ D
Sbjct: 107 GIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQPMGGMQGQASD 166
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+EI A+EI+ K +II+ +GRS E +++D DRD++M+ EA+EYG+ID V+
Sbjct: 167 IEIAAKEILKVKAELYKIIADHSGRSVEDIERDSDRDKWMTASEALEYGMIDKVL 221
>gi|384083495|ref|ZP_09994670.1| ATP-dependent Clp protease, proteolytic subunitclpp [gamma
proteobacterium HIMB30]
Length = 201
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 127/169 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++F+ ++D +A+ I++QLL L++++P KDI L++NSPGGS++A MAIYD +Q
Sbjct: 25 LLKERVIFMVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGMAIYDTMQF 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L GG KGKRFA+PN+R+MIHQP+GG SGQ D++I A+EI
Sbjct: 85 IKPDVSTLCIGQAASMGAFLLAGGAKGKRFALPNSRMMIHQPLGGYSGQASDIDIHAKEI 144
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ ++ TG++ +Q+ KD DRDR+M EA YG+ID V++
Sbjct: 145 LKIREKLNSKLAHHTGQTIKQIAKDTDRDRFMDAAEAKSYGLIDDVLEH 193
>gi|429741037|ref|ZP_19274706.1| endopeptidase Clp [Porphyromonas catoniae F0037]
gi|429159706|gb|EKY02203.1| endopeptidase Clp [Porphyromonas catoniae F0037]
Length = 237
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 128/181 (70%)
Query: 74 MRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
M A+ D L+ +RI+FLG I+D+ A+ I +QLL LD+ +P KDI +++NSPGGS+
Sbjct: 51 MNVAQMDVFSRLMMDRIIFLGTQINDYTANVIQAQLLFLDSSEPGKDISIYINSPGGSVY 110
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A IYD +Q + D+ST+ G++AS AS++L GTKGKR+A+P++RVMIHQP+GG GQ
Sbjct: 111 AGYGIYDTMQYISCDISTICTGVAASMASILLVAGTKGKRYALPHSRVMIHQPLGGMQGQ 170
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI AREI+ K I+S +G+SFE +++D DRD +M+ EA YG++D V+ R
Sbjct: 171 ASDMEIAAREIIKVKKELYTILSNHSGQSFETIERDSDRDYWMTASEAEAYGMVDRVLVR 230
Query: 254 D 254
D
Sbjct: 231 D 231
>gi|422016474|ref|ZP_16363057.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
gi|414092673|gb|EKT54346.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
Length = 206
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 125/171 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI+L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIQLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L GTKGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
A+EI+ K +++ TG+S E++ +D +RDR++S EA EYG++D +
Sbjct: 152 HAQEILKVKSRMNELMALHTGKSIEEINRDTERDRFLSANEAKEYGLVDQI 202
>gi|373106651|ref|ZP_09520951.1| ATP-dependent Clp protease proteolytic subunit [Stomatobaculum
longum]
gi|371651590|gb|EHO17016.1| ATP-dependent Clp protease proteolytic subunit [Stomatobaculum
longum]
Length = 193
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG + D LLK+RI+FL ++D A +++QLL L+++DP KDI
Sbjct: 1 MSLVPYVVEESSRGERSYDIFSRLLKDRIIFLDEEVNDVSAGLVVAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q V+ DVST+ +GM+AS + +L GGTKGKR+A+PN +
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQYVKCDVSTICIGMAASMGAFLLSGGTKGKRYALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ ++ I A +I+ ++ I++ TG+ E + +D +RD YM+ EA
Sbjct: 121 MIHQPSGGAQGQETEIRIVAEQILKTRNKLNEILAANTGKDLEVIARDTERDNYMTAAEA 180
Query: 242 VEYGIIDGVI 251
EYG+ID VI
Sbjct: 181 KEYGLIDEVI 190
>gi|242035957|ref|XP_002465373.1| hypothetical protein SORBIDRAFT_01g037430 [Sorghum bicolor]
gi|241919227|gb|EER92371.1| hypothetical protein SORBIDRAFT_01g037430 [Sorghum bicolor]
Length = 283
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DPTKDI ++VNSPGGS++A MAI+D ++
Sbjct: 103 LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDIIMYVNSPGGSVTAGMAIFDTMKH 162
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 163 IRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 222
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI
Sbjct: 223 LHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVI 269
>gi|268592036|ref|ZP_06126257.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|422010033|ref|ZP_16357015.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
gi|291312428|gb|EFE52881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|414092206|gb|EKT53885.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
Length = 206
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 132/196 (67%), Gaps = 1/196 (0%)
Query: 56 QRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
Q Q ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+A
Sbjct: 7 QEQLASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L GTKGKRF
Sbjct: 67 ENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRF 126
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++ +D +RDR
Sbjct: 127 CLPNSRVMIHQPLGGYQGQASDIEIHAQEILKVKSRMNELMALHTGKSIEEITRDTERDR 186
Query: 235 YMSPIEAVEYGIIDGV 250
++S EA EYG++D +
Sbjct: 187 FLSANEAKEYGLVDQI 202
>gi|296394283|ref|YP_003659167.1| endopeptidase Clp [Segniliparus rotundus DSM 44985]
gi|296181430|gb|ADG98336.1| Endopeptidase Clp [Segniliparus rotundus DSM 44985]
Length = 200
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 124/173 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG+ +DD +A+ + +Q+LLL A+DP+KDI L++NSPGGS+SA MAIYD +QL
Sbjct: 25 LLRERIIFLGSEVDDDIANRLCAQVLLLTAEDPSKDISLYINSPGGSISAGMAIYDTMQL 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T A+GM+AS +L G KGKR+A+P+ R+M+HQP G G D+ IQA ++
Sbjct: 85 SECDIATYAMGMAASMGQFLLAAGAKGKRYALPHARIMMHQPSAGIYGAAADIAIQAEQL 144
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
K TR+ + FTG++ E++ +D +RDR+ + EA EYG +D VI R + I
Sbjct: 145 AATKKEMTRLNAEFTGQTVEKIHEDSERDRWFTAAEAKEYGFVDHVITRAAKI 197
>gi|427393848|ref|ZP_18887488.1| ATP-dependent Clp protease proteolytic subunit [Alloiococcus otitis
ATCC 51267]
gi|425730326|gb|EKU93163.1| ATP-dependent Clp protease proteolytic subunit [Alloiococcus otitis
ATCC 51267]
Length = 197
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 127/168 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+ LG+ ID+ VA++++SQLL LDAQD KDI L+VNSPGGS++A +AIYD +
Sbjct: 24 LLKDRIIILGDAIDNNVANSVVSQLLFLDAQDSDKDIYLYVNSPGGSVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADV T+ +G++AS S++ G KGKRFA+PN+ +MIHQP+GGA GQ ++EI A+ I
Sbjct: 84 IKADVQTIVIGLAASMGSVLATAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKNI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+ ++ +I++ TG+ E + +D DRD +M+ EA+EYG+ID +++
Sbjct: 144 LRTRERLNKILAEATGQDLETIDRDTDRDYFMTAEEALEYGLIDDIME 191
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERIVFLG + D A+ +++QLL L+A+DP KDI L++
Sbjct: 3 PTVIETSGRGDRAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + I+D + +R DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K + ++ TG+S E++ D +RD +MS E+ EYG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYG 182
Query: 246 IIDGVIDR 253
+ID VI+R
Sbjct: 183 LIDQVINR 190
>gi|238795542|ref|ZP_04639057.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
gi|238720661|gb|EEQ12462.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
Length = 194
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KGKRF +PN+RV
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EI AREI+ K +++ TG+S E++++D +RDR++S EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEEA 180
Query: 242 VEYGIIDGVIDR 253
V YG++D V R
Sbjct: 181 VGYGLVDSVFTR 192
>gi|289207758|ref|YP_003459824.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
gi|288943389|gb|ADC71088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
Length = 224
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 140/198 (70%), Gaps = 1/198 (0%)
Query: 55 QQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
Q QH L+ P RG A D LLK+R++F ++D++A+ I++QLL L+
Sbjct: 8 QGAQHAQGLNLVPMVVEQTARGERAYDIYSRLLKDRVIFCVGPVEDYMANVIVAQLLFLE 67
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
+++P K+I L++NSPGG+++A MAIYD +Q ++ VST+ +G +AS +++L GG GKR
Sbjct: 68 SENPDKEISLYINSPGGAVTAGMAIYDTMQFIKPQVSTLCVGQAASMGAVLLAGGAPGKR 127
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
+++P++RVMIHQP+GG GQ D++I AREI+ ++ R+++ TG++ EQV++D DRD
Sbjct: 128 YSLPHSRVMIHQPLGGFQGQASDIDIHAREILKIREELNRVLAHHTGQTVEQVEQDTDRD 187
Query: 234 RYMSPIEAVEYGIIDGVI 251
R+M+ +EA +YG++D V+
Sbjct: 188 RFMTAVEAKDYGLVDNVL 205
>gi|336177525|ref|YP_004582900.1| ATP-dependent Clp protease proteolytic subunit [Frankia symbiont of
Datisca glomerata]
gi|334858505|gb|AEH08979.1| ATP-dependent Clp protease proteolytic subunit [Frankia symbiont of
Datisca glomerata]
Length = 211
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
Query: 62 PLSSAPQ--TPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
P + PQ +P + G E LL+ERI+FLG+ ++D +A+ II QLLLL A+DP +
Sbjct: 7 PSLAVPQLRSPGSNGAGFEEQVFNRLLRERIIFLGSVVEDQIANTIIGQLLLLSAEDPNR 66
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS+SA MAIYDV+Q V D+ TVALG++AS +L GT GKR+++P+T
Sbjct: 67 DISLYINSPGGSVSAGMAIYDVMQYVENDIVTVALGLAASMGQFLLCAGTAGKRYSLPHT 126
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+M+HQP GG G D+ IQA ++++ K I+ TG+ EQ+++D DRDR+ + +
Sbjct: 127 RIMMHQPSGGIGGTASDIAIQAEQMLYTKRMMQERIAFHTGQPVEQIERDSDRDRWFTAV 186
Query: 240 EAVEYGIIDGVIDRDSIIP 258
EA +YG +D V+ + +P
Sbjct: 187 EAKDYGFVDHVVSQARQVP 205
>gi|387872212|ref|YP_005803593.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
Length = 218
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
Query: 56 QRQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+R+ P ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+
Sbjct: 17 ERELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 76
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KGKR
Sbjct: 77 AENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKR 136
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
+ +PN+RVMIHQP+GG GQ D++I AREI+ K +++ TG++ E +++D +RD
Sbjct: 137 YCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETIERDTNRD 196
Query: 234 RYMSPIEAVEYGIIDGVIDRDS 255
R++S E+VEYG++D V+ + S
Sbjct: 197 RFLSASESVEYGLVDSVLSQRS 218
>gi|410659338|ref|YP_006911709.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|410662325|ref|YP_006914696.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
gi|409021693|gb|AFV03724.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|409024681|gb|AFV06711.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
Length = 209
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 126/169 (74%), Gaps = 3/169 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +++QLL L+A+DP KD+ +++NSPGGS++A MAIYD +Q
Sbjct: 25 LLKDRIIFLGGAIDDNVANVVVAQLLFLEAEDPEKDVFIYINSPGGSITAGMAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM---GGASGQVLDVEIQA 201
+R DV T+ +GM+AS + +L GTKGKR A+PN ++IHQP+ GG SGQ ++EI A
Sbjct: 85 IRPDVQTICIGMAASMGAFLLAAGTKGKRAALPNAEILIHQPLIAGGGLSGQATEIEIHA 144
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++++ K+ RI++ TG+ ++V++D DRD YMS EA EYGI+D V
Sbjct: 145 KQLLKTKNKMNRILAERTGQPLDKVEQDTDRDYYMSAEEAKEYGIVDRV 193
>gi|238754235|ref|ZP_04615592.1| ATP-dependent Clp protease proteolytic subunit [Yersinia ruckeri
ATCC 29473]
gi|238707482|gb|EEP99842.1| ATP-dependent Clp protease proteolytic subunit [Yersinia ruckeri
ATCC 29473]
Length = 194
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KGKRF +PN+RV
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EI AREI+ K +++ TG+ E++++D +RDR++S E+
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILKVKSRMNELMAKHTGKPLEEIERDTERDRFLSAEES 180
Query: 242 VEYGIIDGVIDR 253
V+YG++D + +R
Sbjct: 181 VKYGLVDDIFNR 192
>gi|260438109|ref|ZP_05791925.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
gi|292809590|gb|EFF68795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
Length = 194
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG + D A+ +++QLL L+A+DP KDI
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSANIVVAQLLFLEAEDPGKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS++A MAIYD + +++DVST+ +GM+AS + +L GGTKGKRFA+PN +
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSGGTKGKRFALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG+ G D++I A +I+ K I++ TG+ + +++D DRD YM+ EA
Sbjct: 121 MIHQPSGGSRGMASDMKIVADQILKTKQKLNEILAKNTGKPIDVIERDTDRDNYMTAQEA 180
Query: 242 VEYGIIDGVID 252
+EYG+ID +I+
Sbjct: 181 LEYGLIDSIIE 191
>gi|78186273|ref|YP_374316.1| peptidase S14, ClpP [Chlorobium luteolum DSM 273]
gi|115311788|sp|Q3B5V8.1|CLPP_PELLD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78166175|gb|ABB23273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
luteolum DSM 273]
Length = 225
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 138/203 (67%), Gaps = 7/203 (3%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P T+ RG A D LL+ERI+FLG+ ID+ VA I++QL+ L+++DP +DI
Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIY 86
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
++VNSPGGS+SA + IYD +Q +R DVSTV +GM+AS + +L G KGKR ++P++R+M
Sbjct: 87 IYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIM 146
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP GGA GQ D+ IQAREI + I++ TG+ +QV++D +RDR+M+ EA+
Sbjct: 147 IHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMNAEEAL 206
Query: 243 EYGIIDGVIDRDSIIPLVPVPEK 265
+YGIID V + P PEK
Sbjct: 207 DYGIIDQVFAKR------PAPEK 223
>gi|365838987|ref|ZP_09380240.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
gi|364566008|gb|EHM43714.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
Length = 202
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 126/169 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FL IDD VA++II+QLL L+A +P KDI L++NSPGG ++A MA+YD +Q
Sbjct: 26 LLKDRIIFLTGGIDDTVANSIIAQLLFLEADNPDKDIHLYINSPGGVVTAGMAVYDTMQY 85
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS AS++L GTKGKRFA+P+++VMIHQP+GG GQ D+EI AREI
Sbjct: 86 IKPDVSTICVGSAASMASVLLTAGTKGKRFALPHSQVMIHQPLGGVQGQATDIEIHAREI 145
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ + I++ TGR E ++KD +RD +M+ EA YG++D ++ R
Sbjct: 146 LRMRKELNGILASHTGRPIEVIEKDTERDNFMTAEEAKAYGLVDEILIR 194
>gi|294499827|ref|YP_003563527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|294349764|gb|ADE70093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
Length = 193
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL +R++ L + D VA +II+QLL LDA++P KDI +++NSPGGS++A MAI+D +QL
Sbjct: 24 LLLDRVIMLTGEVTDEVATSIIAQLLFLDAENPEKDISIYINSPGGSITAGMAIFDTMQL 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+RADVST+ +G++AS S +L GG KGKRFA+PN+ VMIHQP+GGA GQ ++EI+A+ I
Sbjct: 84 IRADVSTLCIGLAASMGSFLLAGGQKGKRFALPNSEVMIHQPLGGAKGQAAEIEIRAKRI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ KD+ ++S TG+S ++KD DRD + + EA EYG+ID ++
Sbjct: 144 LRLKDHLNELLSERTGQSLSTIKKDTDRDTFFTADEAKEYGMIDQIL 190
>gi|163789795|ref|ZP_02184232.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
AT7]
gi|159875017|gb|EDP69084.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
AT7]
Length = 197
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L +DD +A+A+I+QLL LDAQD KDI +++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGPVDDDLANAVIAQLLFLDAQDSEKDIYIYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A +AI+D + ++ADV T+A+GM+AS S +L GTKGKR+A+PN +MIHQ
Sbjct: 65 NSPGGSVTAGLAIFDTMNFIKADVQTIAMGMAASMGSFLLTAGTKGKRYALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P GG+ GQ ++EI AR I+ ++ +I+S TG+ E +Q+D DRD YMS +A YG
Sbjct: 125 PSGGSQGQATEIEIAARHILKTRERLNKILSERTGQPIEVIQRDTDRDNYMSAEDAKAYG 184
Query: 246 IIDGVIDRDS 255
+ID +++ +S
Sbjct: 185 LIDEIMENNS 194
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 138/202 (68%), Gaps = 1/202 (0%)
Query: 65 SAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRL 123
+ P T RG A D LLK+RI+ LG ++D VA+ I++QLL L+++DP K I L
Sbjct: 2 NVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINL 61
Query: 124 FVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMI 183
++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +L+L G KGKR+A+PN+R+MI
Sbjct: 62 YINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMI 121
Query: 184 HQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVE 243
HQP+GGA GQ D++IQA+EI+ + +I TG + E+++KD +RD +MS +A +
Sbjct: 122 HQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQ 181
Query: 244 YGIIDGVIDRDSIIPLVPVPEK 265
YG+ID V+++ I P P K
Sbjct: 182 YGLIDEVVEKQRAIAPSPTPAK 203
>gi|238783609|ref|ZP_04627630.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
gi|238715487|gb|EEQ07478.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
Length = 207
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 124/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+ K +++ TG+S E++++D +RDR++S EAV YG++D V R
Sbjct: 152 HAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEEAVGYGLVDSVFTR 205
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 126/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG IDD VA++I++Q+L L+A+DP KDI L++NSPGG +++ +AI+
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEAEDPKKDIYLYINSPGGVITSGLAIF 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DVST+ +G +AS +++L G KGKRFA+PNTR+MIHQP+GG GQ D+EI
Sbjct: 80 DTMNYIKPDVSTICIGQAASMGAVLLACGAKGKRFALPNTRIMIHQPLGGFQGQAKDIEI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QA+EI+ K I++ T + EQ+ D DRD +MS EA YG+ID VI++
Sbjct: 140 QAKEILRLKSKINEILAERTSKPIEQIDADCDRDFFMSAEEAKAYGLIDEVIEK 193
>gi|22124934|ref|NP_668357.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
KIM10+]
gi|45440623|ref|NP_992162.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Microtus str. 91001]
gi|51595309|ref|YP_069500.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108808643|ref|YP_652559.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Antiqua]
gi|108811098|ref|YP_646865.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Nepal516]
gi|145600052|ref|YP_001164128.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Pestoides F]
gi|149364997|ref|ZP_01887032.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|153950622|ref|YP_001402052.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162419837|ref|YP_001607420.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Angola]
gi|165926613|ref|ZP_02222445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935884|ref|ZP_02224454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010967|ref|ZP_02231865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212961|ref|ZP_02238996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398957|ref|ZP_02304481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421692|ref|ZP_02313445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423463|ref|ZP_02315216.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025451|ref|YP_001721956.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis YPIII]
gi|186894326|ref|YP_001871438.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218930187|ref|YP_002348062.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
CO92]
gi|229838761|ref|ZP_04458920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896085|ref|ZP_04511255.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|229899329|ref|ZP_04514472.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229901327|ref|ZP_04516449.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|270489513|ref|ZP_06206587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294504888|ref|YP_003568950.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|384123358|ref|YP_005505978.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|384127209|ref|YP_005509823.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|384138999|ref|YP_005521701.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
A1122]
gi|384415839|ref|YP_005625201.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420548224|ref|ZP_15046052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-01]
gi|420559163|ref|ZP_15055694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-03]
gi|420564557|ref|ZP_15060528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-04]
gi|420575259|ref|ZP_15070229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-06]
gi|420580575|ref|ZP_15075060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-07]
gi|420585932|ref|ZP_15079913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-08]
gi|420596436|ref|ZP_15089361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-10]
gi|420602100|ref|ZP_15094400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-11]
gi|420607528|ref|ZP_15099304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-12]
gi|420612918|ref|ZP_15104142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-13]
gi|420623580|ref|ZP_15113588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-15]
gi|420628671|ref|ZP_15118208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-16]
gi|420639000|ref|ZP_15127489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-25]
gi|420644485|ref|ZP_15132489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-29]
gi|420649756|ref|ZP_15137254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-32]
gi|420660902|ref|ZP_15147254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-36]
gi|420671032|ref|ZP_15156419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-45]
gi|420676406|ref|ZP_15161307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-46]
gi|420682024|ref|ZP_15166384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-47]
gi|420698332|ref|ZP_15180768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-53]
gi|420709536|ref|ZP_15190173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-55]
gi|420714993|ref|ZP_15195025.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-56]
gi|420731546|ref|ZP_15209570.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-60]
gi|420736583|ref|ZP_15214121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-61]
gi|420742060|ref|ZP_15219042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-63]
gi|420747778|ref|ZP_15223879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-64]
gi|420753215|ref|ZP_15228731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-65]
gi|420764259|ref|ZP_15238003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-71]
gi|420774473|ref|ZP_15247209.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-76]
gi|420780087|ref|ZP_15252150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-88]
gi|420785687|ref|ZP_15257045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-89]
gi|420790833|ref|ZP_15261666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-90]
gi|420796356|ref|ZP_15266631.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-91]
gi|420801410|ref|ZP_15271175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-92]
gi|420817653|ref|ZP_15285832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-95]
gi|420822953|ref|ZP_15290586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-96]
gi|420833741|ref|ZP_15300311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-99]
gi|420849438|ref|ZP_15314483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-102]
gi|420855106|ref|ZP_15319284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-103]
gi|421764661|ref|ZP_16201449.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
INS]
gi|21759072|sp|Q8ZC65.1|CLPP_YERPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389537|sp|Q66DT4.1|CLPP_YERPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122980282|sp|Q1CL65.1|CLPP_YERPN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123072666|sp|Q1C4K8.1|CLPP_YERPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214723|sp|A4TPE3.1|CLPP_YERPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008652|sp|A7FLC4.1|CLPP_YERP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21957773|gb|AAM84608.1|AE013706_3 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Yersinia pestis KIM10+]
gi|45435480|gb|AAS61039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis biovar Microtus str. 91001]
gi|51588591|emb|CAH20199.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Yersinia pseudotuberculosis IP
32953]
gi|108774746|gb|ABG17265.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Nepal516]
gi|108780556|gb|ABG14614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Antiqua]
gi|115348798|emb|CAL21752.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CO92]
gi|145211748|gb|ABP41155.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Pestoides F]
gi|149291410|gb|EDM41484.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|152962117|gb|ABS49578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis IP 31758]
gi|162352652|gb|ABX86600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis Angola]
gi|165916029|gb|EDR34636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921541|gb|EDR38738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989967|gb|EDR42268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205748|gb|EDR50228.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960611|gb|EDR56632.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051461|gb|EDR62869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057633|gb|EDR67379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169751985|gb|ACA69503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis YPIII]
gi|186697352|gb|ACC87981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis PB1/+]
gi|229681256|gb|EEO77350.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|229687731|gb|EEO79804.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229695127|gb|EEO85174.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701008|gb|EEO89037.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|262362954|gb|ACY59675.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|262366873|gb|ACY63430.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|270338017|gb|EFA48794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294355347|gb|ADE65688.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|320016343|gb|ADV99914.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342854128|gb|AEL72681.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
A1122]
gi|391423531|gb|EIQ86004.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-01]
gi|391424060|gb|EIQ86482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-03]
gi|391438456|gb|EIQ99199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-04]
gi|391443394|gb|EIR03713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-06]
gi|391455350|gb|EIR14474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-07]
gi|391456213|gb|EIR15260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-08]
gi|391471131|gb|EIR28718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-10]
gi|391472599|gb|EIR30045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-11]
gi|391473491|gb|EIR30865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-12]
gi|391487282|gb|EIR43232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-13]
gi|391488750|gb|EIR44559.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-15]
gi|391503166|gb|EIR57382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-16]
gi|391508660|gb|EIR62377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-25]
gi|391519196|gb|EIR71849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-29]
gi|391521816|gb|EIR74253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-32]
gi|391533877|gb|EIR85118.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-36]
gi|391539165|gb|EIR89908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-45]
gi|391552141|gb|EIS01591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-46]
gi|391552450|gb|EIS01871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-47]
gi|391568177|gb|EIS15938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-53]
gi|391581440|gb|EIS27324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-55]
gi|391583695|gb|EIS29325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-56]
gi|391597147|gb|EIS40996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-60]
gi|391611582|gb|EIS53746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-61]
gi|391612097|gb|EIS54208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-63]
gi|391615076|gb|EIS56883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-64]
gi|391624694|gb|EIS65297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-65]
gi|391635408|gb|EIS74572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-71]
gi|391647379|gb|EIS85012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-76]
gi|391651070|gb|EIS88293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-88]
gi|391655514|gb|EIS92246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-89]
gi|391660284|gb|EIS96459.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-90]
gi|391667870|gb|EIT03151.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-91]
gi|391678250|gb|EIT12482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-92]
gi|391691373|gb|EIT24309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-95]
gi|391694289|gb|EIT26962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-96]
gi|391708106|gb|EIT39391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-99]
gi|391724276|gb|EIT53868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-102]
gi|391725026|gb|EIT54533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-103]
gi|411174212|gb|EKS44245.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
INS]
Length = 207
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+EI+ K +++ TG+S E++++D +RDR++S ++VEYG++D V R
Sbjct: 152 HAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTR 205
>gi|295705211|ref|YP_003598286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
gi|294802870|gb|ADF39936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
Length = 338
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL +R++ L + D VA +II+QLL LDA++P KDI +++NSPGGS++A MAI+
Sbjct: 164 DIYSRLLLDRVIMLTGEVTDEVATSIIAQLLFLDAENPEKDISIYINSPGGSITAGMAIF 223
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +QL+RADVST+ +G++AS S +L GG KGKRFA+PN+ +MIHQP+GGA GQ ++EI
Sbjct: 224 DTMQLIRADVSTLCIGLAASMGSFLLAGGQKGKRFALPNSEMMIHQPLGGAKGQAAEIEI 283
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+A+ I+ KD+ ++S TG+S ++KD DRD + + EA EYG+ID ++
Sbjct: 284 RAKRILRLKDHLNELLSERTGQSLSTIKKDTDRDTFFTADEAKEYGMIDKIL 335
>gi|257126078|ref|YP_003164192.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
gi|257050017|gb|ACV39201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
Length = 203
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 130/167 (77%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+F+ ++D +A+AI++QLL LDAQD KDI +++NSPGG ++A +AIYD ++
Sbjct: 37 LLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPGGVITAGLAIYDTMRH 96
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+++DVSTV +G +AS +++L G KGKR+++PN+R+MIHQP+GGA GQ D++IQA+EI
Sbjct: 97 IKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPNSRIMIHQPLGGARGQATDIQIQAKEI 156
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K+ ++I+S TG+S E++ D +RD +MSP EAV YG+ID ++
Sbjct: 157 ERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 203
>gi|388547449|ref|ZP_10150714.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
M47T1]
gi|388274536|gb|EIK94133.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
M47T1]
Length = 213
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ + +QLL L+A++P KDI L++
Sbjct: 21 PMVVEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVCAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVST +G + S + +L GG KGKR+ +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMSIYDTMQFIKPDVSTTCIGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D++I AREI+ + +++ TG++ EQ+++D +RD +MS A EYG
Sbjct: 141 PLGGFQGQASDIDIHAREILSIRHRLNELLAFHTGQTLEQIEQDTNRDNFMSADRAAEYG 200
Query: 246 IIDGVIDR 253
++D VI++
Sbjct: 201 LVDSVINK 208
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 123/172 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERIVFL +DD A +++Q+L L+++DP KDI L++NSPGGS++A AIY
Sbjct: 19 DIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPGGSVTAGFAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKR+A+PN+ ++IHQPMGGA GQ D+ I
Sbjct: 79 DTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEILIHQPMGGARGQATDIMI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A +I+ K I+S TG+ +E+++KD DRD +MS EA EYGI+D VI
Sbjct: 139 HAEQIVRIKRRLNEILSERTGQPYEKIEKDTDRDFFMSAQEAKEYGIVDEVI 190
>gi|322834046|ref|YP_004214073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella sp.
Y9602]
gi|383191242|ref|YP_005201370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|384259224|ref|YP_005403158.1| ATP-dependent Clp protease proteolytic subunit [Rahnella aquatilis
HX2]
gi|321169247|gb|ADW74946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella sp.
Y9602]
gi|371589500|gb|AEX53230.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|380755200|gb|AFE59591.1| ATP-dependent Clp protease proteolytic subunit [Rahnella aquatilis
HX2]
Length = 207
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 134/198 (67%), Gaps = 2/198 (1%)
Query: 56 QRQHDVP-LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+R+ P ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+
Sbjct: 6 EREQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
A+ P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G +GKR
Sbjct: 66 AESPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAEGKR 125
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
F +PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++++D +RD
Sbjct: 126 FCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEIERDTERD 185
Query: 234 RYMSPIEAVEYGIIDGVI 251
R++S EAV+YG++D V
Sbjct: 186 RFLSADEAVQYGLVDSVF 203
>gi|404485705|ref|ZP_11020902.1| ATP-dependent Clp protease proteolytic subunit [Barnesiella
intestinihominis YIT 11860]
gi|404338393|gb|EJZ64840.1| ATP-dependent Clp protease proteolytic subunit [Barnesiella
intestinihominis YIT 11860]
Length = 223
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 125/174 (71%)
Query: 78 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMA 137
+ D L+ +RI+FLG IDD+ ++ I +QLL LD+ DP KDI ++ N+PGGS+ A +
Sbjct: 45 QMDVFSRLMMDRIIFLGTPIDDYTSNVIEAQLLYLDSADPGKDISIYFNTPGGSVYAGLG 104
Query: 138 IYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDV 197
IYD +Q + +D+ST+ GM+AS +++L GTKGKRFA+ ++RVMIHQPMGGA GQ D+
Sbjct: 105 IYDTMQFISSDISTICTGMAASMGAVLLVAGTKGKRFALKHSRVMIHQPMGGAQGQASDI 164
Query: 198 EIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
EI AREI K II+ +G S+E+V+KD DRD +M+ +EA EYG+ID V+
Sbjct: 165 EITAREIQKLKKELYTIIADHSGNSYERVEKDSDRDYWMTALEAKEYGMIDDVL 218
>gi|395244781|ref|ZP_10421735.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
hominis CRBIP 24.179]
gi|394482987|emb|CCI82743.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
hominis CRBIP 24.179]
Length = 194
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ I+ TG+ E++QKD +RD Y+S EA +YG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLSAQEAKDYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDEIM 189
>gi|374335521|ref|YP_005092208.1| ATP-dependent Clp protease proteolytic subunit [Oceanimonas sp.
GK1]
gi|372985208|gb|AEY01458.1| ATP-dependent Clp protease proteolytic subunit [Oceanimonas sp.
GK1]
Length = 207
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 125/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ I +QLL L++++P KDI L++NSPGGS++A M+IYD +Q
Sbjct: 37 LLKERVIFLTGQVEDHMANLICAQLLFLESENPEKDIYLYINSPGGSVTAGMSIYDTMQF 96
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ +VSTV +G + S + +L GG GKRFA+PN+RVMIHQP+GG GQ D++I A+EI
Sbjct: 97 IKPNVSTVCMGQACSMGAFLLAGGAPGKRFALPNSRVMIHQPLGGFQGQASDIQIHAKEI 156
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++ KD R+++ TG+ V++D DRD +MS ++A EYG++D V+
Sbjct: 157 LYIKDKLNRLLAEHTGQDLSVVERDTDRDNFMSAVQAKEYGLVDQVL 203
>gi|420553562|ref|ZP_15050818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-02]
gi|420569607|ref|ZP_15065113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-05]
gi|420591043|ref|ZP_15084509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-09]
gi|420618297|ref|ZP_15108830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-14]
gi|420633805|ref|ZP_15122806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-19]
gi|420655369|ref|ZP_15142296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-34]
gi|420666185|ref|ZP_15152006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-42]
gi|420687358|ref|ZP_15171122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-48]
gi|420692566|ref|ZP_15175697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-52]
gi|420704163|ref|ZP_15185410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-54]
gi|420720505|ref|ZP_15199753.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-58]
gi|420725980|ref|ZP_15204569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-59]
gi|420758993|ref|ZP_15233387.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-66]
gi|420769492|ref|ZP_15242698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-72]
gi|420806767|ref|ZP_15276025.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-93]
gi|420812123|ref|ZP_15280835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-94]
gi|420828034|ref|ZP_15295153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-98]
gi|420838590|ref|ZP_15304689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-100]
gi|420843781|ref|ZP_15309401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-101]
gi|420860298|ref|ZP_15323854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-113]
gi|391423950|gb|EIQ86385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-02]
gi|391439562|gb|EIR00202.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-05]
gi|391458196|gb|EIR17077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-09]
gi|391489124|gb|EIR44903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-14]
gi|391503385|gb|EIR57585.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-19]
gi|391520901|gb|EIR73417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-34]
gi|391536802|gb|EIR87752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-42]
gi|391552917|gb|EIS02301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-48]
gi|391567019|gb|EIS14934.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-52]
gi|391572900|gb|EIS20068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-54]
gi|391594117|gb|EIS38316.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-58]
gi|391598290|gb|EIS42027.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-59]
gi|391629474|gb|EIS69405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-66]
gi|391637429|gb|EIS76349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-72]
gi|391677428|gb|EIT11736.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-93]
gi|391678723|gb|EIT12911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-94]
gi|391696021|gb|EIT28549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-98]
gi|391711593|gb|EIT42546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-100]
gi|391712447|gb|EIT43325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-101]
gi|391727619|gb|EIT56810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-113]
Length = 194
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLKERI+FL ++D +A+ I +Q+L L+A++P KDI
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KGKRF +PN+RV
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EI A+EI+ K +++ TG+S E++++D +RDR++S ++
Sbjct: 121 MIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQS 180
Query: 242 VEYGIIDGVIDR 253
VEYG++D V R
Sbjct: 181 VEYGLVDSVFTR 192
>gi|30265176|ref|NP_847553.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Ames]
gi|47530690|ref|YP_022039.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. 'Ames Ancestor']
gi|49187986|ref|YP_031239.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Sterne]
gi|65317122|ref|ZP_00390081.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus
anthracis str. A2012]
gi|165869926|ref|ZP_02214583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167635263|ref|ZP_02393578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|167640458|ref|ZP_02398721.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|170687959|ref|ZP_02879172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|170707727|ref|ZP_02898178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|177652976|ref|ZP_02935303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190567666|ref|ZP_03020578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Tsiankovskii-I]
gi|227817909|ref|YP_002817918.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. CDC 684]
gi|229599890|ref|YP_002869370.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. A0248]
gi|254686423|ref|ZP_05150282.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. CNEVA-9066]
gi|254735629|ref|ZP_05193336.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Western North America USA6153]
gi|254744284|ref|ZP_05201964.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Kruger B]
gi|254755582|ref|ZP_05207615.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Vollum]
gi|254757037|ref|ZP_05209065.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Australia 94]
gi|386739003|ref|YP_006212184.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
anthracis str. H9401]
gi|421508903|ref|ZP_15955813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. UR-1]
gi|421639800|ref|ZP_16080390.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. BF1]
gi|67460531|sp|Q81X63.1|CLPP2_BACAN RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|30259853|gb|AAP29039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47505838|gb|AAT34514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. 'Ames Ancestor']
gi|49181913|gb|AAT57289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Sterne]
gi|164714249|gb|EDR19769.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167511501|gb|EDR86884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|167529306|gb|EDR92058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|170127284|gb|EDS96160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|170668068|gb|EDT18818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|172081751|gb|EDT66821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190561082|gb|EDV15055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Tsiankovskii-I]
gi|227003920|gb|ACP13663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|229264298|gb|ACQ45935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|384388855|gb|AFH86516.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
anthracis str. H9401]
gi|401821079|gb|EJT20239.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. UR-1]
gi|403393152|gb|EJY90398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. BF1]
Length = 193
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEAMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
++EI A+ I+ ++ +I++ TG+ E +Q+D DRD +M+ +A+EYG+ID +
Sbjct: 133 ATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEYGLIDKI 189
>gi|266624421|ref|ZP_06117356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
hathewayi DSM 13479]
gi|288863728|gb|EFC96026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
hathewayi DSM 13479]
Length = 195
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 119/167 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG + D A +++QLL L+A+DP KDI L++NSPGGS++A MAIYD +
Sbjct: 24 LLKERIIFLGEEVTDVSASIVVAQLLFLEAEDPNKDINLYINSPGGSVTAGMAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVSTV +GM+AS + +L GG KGKRFA+PN +MIHQP GGA GQ +++I A I
Sbjct: 84 IKCDVSTVCMGMAASMGAFLLSGGAKGKRFALPNAEIMIHQPSGGAQGQATEIKIVAENI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I++ TG+ +E +++D +RD YM+ EA YG+ID +I
Sbjct: 144 LKIKKRLNEILAANTGQPYEVIERDTERDNYMNAEEAKAYGLIDEII 190
>gi|386815716|ref|ZP_10102934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
gi|386420292|gb|EIJ34127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
Length = 204
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LL+ER++F ++D++A+ I++QLL L++++P KDI L++
Sbjct: 15 PMVIEQSARGERAFDIYSRLLRERVIFCVGEVEDYMANLIVAQLLFLESENPEKDIHLYI 74
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ MAIYD +Q ++ DVST+ +G +AS +++L GG KGKRFA+P++RVMIHQ
Sbjct: 75 NSPGGVITSGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFALPHSRVMIHQ 134
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI AREI+ ++ R+++ TG+ E++++D DRD +M A EYG
Sbjct: 135 PLGGFRGQASDIEIHAREILKMREELNRVLASHTGQPLERIEQDTDRDNFMDAPTACEYG 194
Query: 246 IIDGVI 251
+ID V+
Sbjct: 195 LIDEVL 200
>gi|357442229|ref|XP_003591392.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355480440|gb|AES61643.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 304
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 125/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I+SQLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 116 LFQYRIIRCGGAVDDDMANIIVSQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMKH 175
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKRF++PN+R+MIHQP+GG G D++IQA E+
Sbjct: 176 IRPDVSTVCVGLAASMGAFLLSAGTKGKRFSLPNSRIMIHQPLGGFQGGQTDIDIQANEM 235
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N +S TG+S E++ +D DRD +MS EA EYG+IDGVI
Sbjct: 236 LHHKANLNGYLSYQTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 282
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+F+G IDD +A+ +I+QLL L+A+DP KDI L++NSPGG ++
Sbjct: 15 RGERAYDIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPGGLVT 74
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q +R DVST+ LG +AS A+ +L G KGKR+A+P R+M+HQP+GG GQ
Sbjct: 75 AGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIMLHQPLGGFQGQ 134
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+VEI AREIM + ++S TG+ E++ +D DRD +M+ +A +YG+ID VI
Sbjct: 135 ATEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMTAQQAKDYGLIDEVI 192
>gi|402549260|ref|ZP_10846113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86C]
Length = 204
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 135/187 (72%), Gaps = 5/187 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG + D LLKER++FL ++D++++ I++QLL L++++P KDI +++N
Sbjct: 15 QTP----RGERSFDIYSRLLKERVIFLSGPVEDYMSNLIVAQLLFLESENPEKDISIYIN 70
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS+SA +AIYD +Q + +ST+ +G +AS +++L GG KGKRFA+PN+R+MIHQP
Sbjct: 71 SPGGSISAGLAIYDTMQFISPSISTLCIGQAASMGAILLAGGEKGKRFALPNSRIMIHQP 130
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG GQ D EI A+EI+H K I++ TG++ ++++KD DRD ++ A++YG+
Sbjct: 131 LGGFQGQASDFEIHAKEILHMKKVVNEILAKHTGQTIKKIEKDTDRDNFLDTTAAIDYGL 190
Query: 247 IDGVIDR 253
+D V+D+
Sbjct: 191 VDNVLDK 197
>gi|320540337|ref|ZP_08039989.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Serratia symbiotica str. Tucson]
gi|320029657|gb|EFW11684.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Serratia symbiotica str. Tucson]
Length = 207
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 124/176 (70%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A+ P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVST+ +G + S S +L G K KRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMKFIKPDVSTICMGQACSMGSFLLTAGAKSKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG+S Q++ D +RDR+M+ EAVEYG++DG++ S
Sbjct: 152 HAREILKVKARMNELMAEHTGQSLAQIECDTERDRFMTADEAVEYGLVDGILTHRS 207
>gi|350564171|ref|ZP_08932990.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
gi|349778171|gb|EGZ32530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
Length = 201
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLKER++FL ++D +A+ I++Q+L L++++P KDI L++
Sbjct: 12 PMVVEQTSRGERAFDIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESENPEKDIHLYI 71
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD ++ ++ DVST+ LG +AS S +L G KGKRFA+PN+RVMIHQ
Sbjct: 72 NSPGGSVTAGMAIYDTMRFIKPDVSTMCLGQAASMGSFLLAAGAKGKRFALPNSRVMIHQ 131
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D EI AREI+ KD + +S TG+ E +++D DRD +MS +A EYG
Sbjct: 132 PLGGFQGQASDFEIHAREILFIKDKLNKALSENTGQPLEVIERDTDRDNFMSAEKAKEYG 191
Query: 246 IIDGVIDR 253
+ID V+ +
Sbjct: 192 LIDQVLAK 199
>gi|392988796|ref|YP_006487389.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus hirae
ATCC 9790]
gi|392336216|gb|AFM70498.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus hirae
ATCC 9790]
Length = 197
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L + D +A++II+QLL LDAQD KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD + V+ADV T+ +GM+AS S +L G KGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVTAGMAIYDTMNFVKADVQTIVMGMAASMGSFLLTAGKKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ +I++ TG+ E ++KD DRD YM+ +A YG
Sbjct: 125 PLGGAQGQATEIEIAARHILQTRERLNKILAERTGQPLEVIEKDTDRDNYMTAEQAKAYG 184
Query: 246 IIDGVIDRDS 255
+ID V++ +
Sbjct: 185 LIDEVMENSA 194
>gi|352085686|ref|ZP_08953277.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|389798002|ref|ZP_10201030.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
gi|351681627|gb|EHA64751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|388445897|gb|EIM01950.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
Length = 209
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P RG + D LLKER++FL ++D VA+ I++Q+L L++++P KDI
Sbjct: 9 LNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGG+++A +AIYD +Q ++ +VST+ +G + S S +L G KGKRFA+PN+RV
Sbjct: 69 NFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRV 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EIQAREI++ ++ ++ TG++ E+++ D++RDR+MS +A
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYIRERLNKLYVQHTGQTLEKIELDMERDRFMSAADA 188
Query: 242 VEYGIIDGVIDR 253
YG+ID V+D+
Sbjct: 189 KAYGLIDEVLDK 200
>gi|163815266|ref|ZP_02206643.1| hypothetical protein COPEUT_01426 [Coprococcus eutactus ATCC 27759]
gi|158449461|gb|EDP26456.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Coprococcus eutactus ATCC 27759]
Length = 193
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 122/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ ++D A +I+QLL L+++DP+KDI L++NSPGGS++A M IYD ++
Sbjct: 24 LLKDRIIFLGDEVNDATASLVIAQLLFLESEDPSKDISLYINSPGGSVTAGMGIYDTMRY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ GM+AS + +L GG KGKR+A+PN+ +MIHQP+GG GQ ++EI AR I
Sbjct: 84 IKCDVSTICCGMAASMGAFLLAGGAKGKRYALPNSEIMIHQPLGGTQGQATEIEIAARHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ ++++ TG+ + + D DRD +M+ EA YG+ID VI
Sbjct: 144 LKTKEKLNKMLAENTGKPLDVIAADTDRDNWMTADEACAYGLIDSVI 190
>gi|427733872|ref|YP_007053416.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427368913|gb|AFY52869.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 201
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RI+FLG ID VA+ I++Q+LLLDA+D KDI +++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRDRIIFLGQPIDSNVANLIVAQMLLLDAEDAEKDIYMYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D ++ +R D+ T+ G++AS + +L GTKGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMRHIRPDICTICTGLAASMGAFLLTAGTKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K + ++ TG+ E++ +D +RD +MSP +A +YG+ID VIDR
Sbjct: 131 ATDIEIQAKEILYHKQQLNQYLAENTGQPIERIAEDTERDFFMSPSDAKDYGLIDQVIDR 190
Query: 254 DS 255
S
Sbjct: 191 HS 192
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+F+G IDD VA+ +I+Q+L L+A+DP KDI ++NSPGG ++
Sbjct: 14 RGERAYDIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHFYINSPGGVVT 73
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD +Q ++ DVST+ LG +AS S +L G KGKR+A+P R+M+HQP+GG GQ
Sbjct: 74 AGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARIMLHQPLGGVQGQ 133
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI AREI+ KD +++ TG+ E++ +D DRD +MS EA EYGIID V+
Sbjct: 134 ATEIEIHAREILRIKDILNELLAKHTGQPREKIARDTDRDFFMSAEEAKEYGIIDEVL 191
>gi|392427640|ref|YP_006468634.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
gi|391357603|gb|AFM43302.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
Length = 207
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +++Q+L L+A+DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 25 LLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPGGSITAGMAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM---GGASGQVLDVEIQA 201
+R+DV T+ +GM+AS + +L G KGKR A+PN+ V+IHQP+ G SGQ ++EI A
Sbjct: 85 IRSDVRTICIGMAASMGAFLLAAGAKGKRVALPNSEVLIHQPLIGGHGLSGQATEIEIHA 144
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++++ K +I++ TG+ E++++D DRD YMS EA EYG++D ++++
Sbjct: 145 KQLLRTKSKMNQILAAKTGQPLEKIERDTDRDYYMSAEEAKEYGLVDQILEK 196
>gi|389576431|ref|ZP_10166459.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
cellulosolvens 6]
gi|389311916|gb|EIM56849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
cellulosolvens 6]
Length = 193
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 124/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ++D A+ +++QLL L+++DP+KDI L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKDRIIFLGEEVNDVSANLVVAQLLFLESEDPSKDIHLYINSPGGSVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ LG++AS + +L GGTKGKR A+PN +MIHQP GGA G+ D+EI A +I
Sbjct: 84 IKCDVSTICLGLAASMGAFLLAGGTKGKRLALPNAEIMIHQPSGGAQGKASDIEIVAEQI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I++ TG+++E+V+ D + D Y++ EA YGIID VI
Sbjct: 144 LKIKKRMNTILAENTGQTYEKVKADTELDNYLTAEEAKAYGIIDSVI 190
>gi|238923369|ref|YP_002936885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|259585954|sp|C4ZGF4.1|CLPP_EUBR3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238875044|gb|ACR74751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|291525457|emb|CBK91044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale DSM 17629]
gi|291528435|emb|CBK94021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale M104/1]
Length = 193
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 119/167 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG +++ A +++QLL L+++DP KDI L++NSPGG ++A +AIYD +Q
Sbjct: 24 LLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPGGMVTAGLAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G++AS + +L GG KGKR+A+PN +MIHQP GGA GQ +++I A I
Sbjct: 84 IKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAKGQATEIQIAAENI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K I++ TG+ +E + D +RD YMS EA EYG+ID VI
Sbjct: 144 LKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEAAEYGLIDSVI 190
>gi|183601061|ref|ZP_02962554.1| hypothetical protein PROSTU_04684 [Providencia stuartii ATCC 25827]
gi|386742738|ref|YP_006215917.1| ATP-dependent Clp protease proteolytic subunit [Providencia
stuartii MRSN 2154]
gi|188019401|gb|EDU57441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Providencia stuartii ATCC 25827]
gi|384479431|gb|AFH93226.1| ATP-dependent Clp protease proteolytic subunit [Providencia
stuartii MRSN 2154]
Length = 206
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 125/171 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI+L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIQLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S S +L GTKGKRF +PN+RVMIHQP+GG GQ D++I
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGSFLLAAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIQI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
A+EI+ K +++ TG+S E++ +D +RDR++S EA EYG++D +
Sbjct: 152 HAQEILKVKTRMNELMALHTGKSVEEINRDTERDRFLSADEAKEYGLVDHI 202
>gi|385787570|ref|YP_005818679.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
Length = 215
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 40 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIY 99
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKR+ +PN+RVMIHQP+GG GQ D++I
Sbjct: 100 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDI 159
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG++ E +++D +RDR++S E+VEYG++D V+ + S
Sbjct: 160 HAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRFLSASESVEYGLVDSVLSQRS 215
>gi|119898362|ref|YP_933575.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. BH72]
gi|166201798|sp|A1K783.1|CLPP_AZOSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119670775|emb|CAL94688.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 212
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
V L P + RG + D LLKER+VFL ++D A+ I++QLL L++++P K
Sbjct: 15 VGLGLIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDK 74
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI ++NSPGGS++A +AIYD +Q ++ +VST+ +G +AS + +L G KGKRF +PN+
Sbjct: 75 DIYFYINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNS 134
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
RVMIHQP+GG GQ D+EI AREI++ ++ +++ TG++ EQ++KD DRD +MS
Sbjct: 135 RVMIHQPLGGFQGQASDIEIHAREILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSAT 194
Query: 240 EAVEYGIIDGVI 251
AVEYG++D V+
Sbjct: 195 AAVEYGLVDKVL 206
>gi|317508500|ref|ZP_07966167.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
gi|316253191|gb|EFV12594.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
Length = 200
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 124/173 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG+ +DD +A+ + +Q+LLL A+DPTKDI L++NSPGGS+SA MAIYD +QL
Sbjct: 25 LLRERIIFLGSEVDDDIANRLCAQILLLTAEDPTKDISLYINSPGGSISAGMAIYDTMQL 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+V+T A+GM+AS +L G KGKRFA+P+ R+M+HQP G G D+ IQA ++
Sbjct: 85 SECEVATYAMGMAASMGQFLLAAGAKGKRFALPHARIMMHQPSAGIYGAAADIAIQAEQL 144
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
K TR+ + FTG++ E++ +D +RDR+ + EA +YG +D VI R + I
Sbjct: 145 AATKKEMTRLNAEFTGQTVEKIHEDSERDRWFTAAEAKDYGFVDHVISRAAKI 197
>gi|187928950|ref|YP_001899437.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12J]
gi|241663134|ref|YP_002981494.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12D]
gi|309781948|ref|ZP_07676679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|404377636|ref|ZP_10982736.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
gi|187725840|gb|ACD27005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12J]
gi|240865161|gb|ACS62822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12D]
gi|308919292|gb|EFP64958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|348611501|gb|EGY61146.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
Length = 215
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER++F+ ++D A+ +++QLL L++++P KDI
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+S+ +A+YD +Q ++ DVST+ +GM+AS + +L G KGKR A+PN+R+
Sbjct: 83 SLYINSPGGSVSSGLAMYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRLALPNSRI 142
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQAREI++ ++ ++S TG+ +++ +D DRD +MS +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNTVLSEVTGQPVDKIARDTDRDNFMSSEQA 202
Query: 242 VEYGIIDGVIDR 253
EYG+ID VI +
Sbjct: 203 KEYGLIDQVIAK 214
>gi|422023827|ref|ZP_16370329.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
gi|414091842|gb|EKT53523.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
Length = 206
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 124/171 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L GT+GKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGTEGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
A+EI+ K +++ TG+S E++ +D +RDR++S EA EYG++D +
Sbjct: 152 HAQEILKVKARMNELMAKHTGKSIEEINRDTERDRFLSANEAKEYGLVDHI 202
>gi|226310010|ref|YP_002769904.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226092958|dbj|BAH41400.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 126/169 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+A+++QLL L A+DP KDI L++NSPGGS++A MAI D ++
Sbjct: 24 LLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGSVTAGMAIIDTMKF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DVST+ GM+AS +++L G GKR+A+PN VM+HQP GG+ GQ D++I A I
Sbjct: 84 VAPDVSTICTGMAASMGAMLLVAGAPGKRYALPNAEVMLHQPWGGSQGQASDIKIAADRI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
M ++ IIS TG++ EQ++KD DRD +++ EA+EYG+ID VI++
Sbjct: 144 MRHRHMLYTIISERTGKTVEQIEKDADRDYFLTAAEALEYGLIDKVIEK 192
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 127/179 (70%), Gaps = 1/179 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG IDD A+ II+Q+L L+A+DP KDI+ ++NSPGG ++
Sbjct: 13 RGERAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPGGVVT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD +Q VR+ V+T+ +G +AS ASL+L G KGKR+++P R++IHQP+GG GQ
Sbjct: 73 AGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGVQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
D+EI A+EI+ + I+S TG+ E++ +D +RD +MS EA EYGIID V D
Sbjct: 133 ATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAKEYGIIDEVYD 191
>gi|337750712|ref|YP_004644874.1| protein ClpP [Paenibacillus mucilaginosus KNP414]
gi|379723759|ref|YP_005315890.1| protein ClpP [Paenibacillus mucilaginosus 3016]
gi|386726512|ref|YP_006192838.1| protein ClpP [Paenibacillus mucilaginosus K02]
gi|336301901|gb|AEI45004.1| ClpP [Paenibacillus mucilaginosus KNP414]
gi|378572431|gb|AFC32741.1| ClpP [Paenibacillus mucilaginosus 3016]
gi|384093637|gb|AFH65073.1| protein ClpP [Paenibacillus mucilaginosus K02]
Length = 196
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 122/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+ +I+QLL L A DP KDI L++NSPGGS++A M IYD +Q
Sbjct: 24 LLKDRIIFLGSAIDDDVANLVIAQLLFLAATDPDKDIHLYINSPGGSVTAGMGIYDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G++AS SL+L G GKRFA+PN+ VMIHQP+GG GQ D++I A I
Sbjct: 84 IKPDVSTICVGLAASMGSLLLTAGAPGKRFALPNSEVMIHQPLGGVRGQASDIKIHADWI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K I TG+ ++++++D DRD +MS EA EYG+ID VI R
Sbjct: 144 IKTKRKLNEIYVARTGQPYDKIERDTDRDNFMSAAEAKEYGLIDAVITR 192
>gi|406999542|gb|EKE17145.1| hypothetical protein ACD_10C00602G0002 [uncultured bacterium]
Length = 209
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG A D LLKER++FL ++D A+ +++QLL L+A +P KDI
Sbjct: 14 LGMVPMVIEQSGRGERAFDIYSRLLKERVIFLVGPVNDITANLVVAQLLFLEADNPDKDI 73
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS++A M+IYD +Q ++ DVST+ +G +AS + +L G KGKRFA+PN+RV
Sbjct: 74 YFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRV 133
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+ I A+EI+ +D RI++ +G+ E+++KD DRD ++S EA
Sbjct: 134 MIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSSAEA 193
Query: 242 VEYGIIDGVIDR 253
EYG+ID V+ R
Sbjct: 194 AEYGLIDKVLTR 205
>gi|375293639|ref|YP_005128179.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae INCA 402]
gi|371583311|gb|AEX46977.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae INCA 402]
Length = 199
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 120/168 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD +A+ + +Q+LLL A+DPT+DI L++NSPGGS++A MAIYD ++
Sbjct: 24 LLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMEY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T +G++AS +L GGTKGKRFA+P+ R+M+HQP G G D+ IQA +
Sbjct: 84 SPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTAADIAIQAEQF 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
K +I+ TG+SFEQ+ KD DRDR+ + +A EYGI+D VI+
Sbjct: 144 AQTKREMAELIAEHTGQSFEQITKDSDRDRWFTAQQAKEYGIVDHVIE 191
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 125/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+ LG+ IDD VA I +QLL L+++DP K+I +++NSPGGS+S+ MAIYD +Q
Sbjct: 24 LLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKEIYMYINSPGGSVSSGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+ A V+T+ LG +AS +L+LG G G R+A+P++R+MIHQP+GGA GQ D+ I A+EI
Sbjct: 84 ISAPVATLCLGQAASMGALLLGAGEAGMRYALPHSRIMIHQPLGGAQGQASDIHIHAKEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ +D I++G TG+ E++++D +RD +MS EA EYG+ID V+
Sbjct: 144 LRLRDELNEIMAGHTGQKLEKIREDTERDYFMSSKEAQEYGLIDKVM 190
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
Length = 218
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 128/173 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+F+G IDD VA+++++QLL L ++D TKDI++++NSPGG + A +AIY
Sbjct: 41 DLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQMYINSPGGVIYAGLAIY 100
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DVST +GM+ S ++IL G KGKR+ +PN+ V+IHQP+GGA GQ D+EI
Sbjct: 101 DTMQWLRPDVSTFCMGMAMSMGAVILAAGQKGKRYTLPNSTVLIHQPLGGAEGQAADIEI 160
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
AREI+ + N I++ TG++ E++ +D DR+ Y+S +AVEYG++D V++
Sbjct: 161 TAREILRLRRNLYEILAKHTGQTIERIMQDSDRNYYLSAQQAVEYGLVDDVLN 213
>gi|171059225|ref|YP_001791574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
gi|226706459|sp|B1Y6H3.1|CLPP_LEPCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170776670|gb|ACB34809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
Length = 202
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ER++FL ++D A+ +++QLL L++++P KDI ++NSPGGS+S
Sbjct: 21 RGERAYDIYSRLLRERVIFLVGPVNDQSANLVVAQLLFLESENPDKDISFYINSPGGSVS 80
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M+IYD +Q ++ VST+ +G++AS + +L G KGKRF++PN+++MIHQP+GGA GQ
Sbjct: 81 AGMSIYDTMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGAQGQ 140
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI AREI+ ++ RI++ TG+S E++Q D +RD +MS EA YG+ID VI +
Sbjct: 141 ATDIEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFMSSEEAQTYGLIDQVISK 200
>gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 198
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 127/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +ERI+FLG +DD + + II+ +L LD++D +KDI L++NSPGGS++A MAIY
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNSKDIILYINSPGGSVTAGMAIY 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV TV +G++AS S +L G KGKR A+P++R+MIHQP GG GQ D+EI
Sbjct: 82 DTMQHIKSDVVTVCVGLAASMGSFLLAAGKKGKRIALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+AREI+ + I + TG+S E+++KD+DRD +MS EA EYG+ID VID+
Sbjct: 142 EAREILRIRHQLNEIYAQNTGQSLEKIEKDMDRDFFMSADEAKEYGLIDQVIDQ 195
>gi|336054467|ref|YP_004562754.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
kefiranofaciens ZW3]
gi|333957844|gb|AEG40652.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
kefiranofaciens ZW3]
Length = 194
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ I+ TG+ E++QKD +RD Y++ +A EYG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEQAKEYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDDIM 189
>gi|317492909|ref|ZP_07951333.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365835459|ref|ZP_09376878.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Hafnia
alvei ATCC 51873]
gi|316919031|gb|EFV40366.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364566034|gb|EHM43738.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Hafnia
alvei ATCC 51873]
Length = 206
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 31 DIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIY 90
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI
Sbjct: 91 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEI 150
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K +++ +G+ E++++D +RDR++S EAVEYG++D V+
Sbjct: 151 HAKEILKVKARMNELMAKHSGKPLEEIERDTERDRFLSADEAVEYGLVDSVM 202
>gi|395225605|ref|ZP_10404124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
gi|394446228|gb|EJF07066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
Length = 197
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 133/195 (68%), Gaps = 1/195 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P + RG + D LLK+RIV L ++D VA +I++QLL L+A+DP KDI
Sbjct: 1 MSYIPYVVEKSGRGERSYDIYSRLLKDRIVMLSGEVNDAVASSIVAQLLFLEAEDPEKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGG +++ M+IYD + ++ VST+ +G +AS + +L G KGKR+A+PN R+
Sbjct: 61 YFYINSPGGVITSGMSIYDTMNYIKPQVSTICIGQAASMGAFLLSAGEKGKRYALPNARI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D++IQA EI+ K + +I+S TG+S E +++D +RD++MS E+
Sbjct: 121 MIHQPLGGAKGQATDIQIQAEEILRMKRDLNKILSENTGQSIETIERDTERDKFMSAEES 180
Query: 242 VEYGIIDGVIDRDSI 256
+YG+ID V+ R I
Sbjct: 181 AQYGLIDKVLSRHKI 195
>gi|338999443|ref|ZP_08638086.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. TD01]
gi|338763592|gb|EGP18581.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. TD01]
Length = 205
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + +G A D LLKER++FL ++D++A+ +++QLL L++++P KDI L++
Sbjct: 14 PMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHLYI 73
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVSTV +G +AS +L+L G GKR+ +PN+RVMIHQ
Sbjct: 74 NSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQ 133
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ ++ +I++ TG+ E V +D DRD +MS A EYG
Sbjct: 134 PLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDLEAVARDTDRDNFMSATTAQEYG 193
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 194 LIDAVLDK 201
>gi|363806660|ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycine max]
gi|255645951|gb|ACU23464.1| unknown [Glycine max]
Length = 304
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 116 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRH 175
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 176 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 235
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+S +++ +D DRD +MS EA EYG+IDGVI
Sbjct: 236 LHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVI 282
>gi|262037349|ref|ZP_06010814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
gi|261748606|gb|EEY35980.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
Length = 189
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ++D +A++II+QLL LDAQD KDI +++NSPGG ++A +AIYD ++
Sbjct: 23 LLKDRIIFLGGEVEDNIANSIIAQLLFLDAQDKEKDIVMYINSPGGVVTAGLAIYDTMRH 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADVSTV +G +AS +++L G KGKR+++PN+RVMIHQP GGA GQ D++IQA+EI
Sbjct: 83 IKADVSTVCIGQAASMGAVLLASGAKGKRYSLPNSRVMIHQPSGGARGQATDIQIQAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K I+S TG+ E++ +D +RD +MS EA+ YGIID ++
Sbjct: 143 EKIKKTLNEILSEATGKPVEEIYRDTERDNFMSSEEALAYGIIDKIL 189
>gi|259909254|ref|YP_002649610.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
Length = 207
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKR+ +PN+RVMIHQP+GG GQ D++I
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
AREI+ K +++ TG++ E +++D +RDR++S E+VEYG++D V+ + S
Sbjct: 152 HAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRFLSASESVEYGLVDSVLSQRS 207
>gi|402574685|ref|YP_006624028.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
gi|402255882|gb|AFQ46157.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
Length = 203
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 129/172 (75%), Gaps = 3/172 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +++Q+L L+A+DP KDI L++NSPGGS++A MAIYD +Q
Sbjct: 25 LLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPGGSITAGMAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM---GGASGQVLDVEIQA 201
+R+DV T+ +GM+AS + +L GTKGKR A+PN+ V+IHQP+ G SGQ ++EI A
Sbjct: 85 IRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLIHQPLIGGHGLSGQATEIEIHA 144
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++++ K +I++ TG+ E+V+KD +RD YM+ EA EYG++D V+++
Sbjct: 145 KQLLRTKAKMNKILAERTGQPIEKVEKDTERDYYMTAEEAKEYGLVDQVLEK 196
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85.1|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKERI+FLG IDD VA+ II+QLL L+A+DP KDI L++
Sbjct: 4 PMVVEQSGRGERAYDIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ MAIYD ++ ++A VST+ +G +AS +++L G KGKRF++ ++R+MIHQ
Sbjct: 64 NSPGGVVTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+ I A+EI+ K+ I++ TG+S E+++ D DRD +MS EA EYG
Sbjct: 124 PLGGFQGQATDISIHAKEILRMKEELNSILADLTGQSKERIEADTDRDYFMSATEAEEYG 183
Query: 246 IIDGVIDR 253
+ID R
Sbjct: 184 LIDATFTR 191
>gi|373495484|ref|ZP_09586069.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
infirmum F0142]
gi|371964962|gb|EHO82466.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
infirmum F0142]
Length = 192
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 123/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
+LK+RI+FLG+ IDD VA+ +++QLL LDA+D KDI L++NSPGGS++A +AI D +
Sbjct: 24 MLKDRIIFLGDEIDDHVANLVVAQLLFLDAEDSEKDINLYINSPGGSVTAGLAILDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ADVST+ +G++AS +++L G KGKRFA+PN +MIHQP+GGA GQ D+ I A I
Sbjct: 84 IKADVSTICVGLAASMGAVLLSSGAKGKRFALPNAEIMIHQPLGGAKGQASDIRIHADWI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
K I+S T + FE+V++D DRD +M+ EA EYG++D VI R
Sbjct: 144 NKTKTKLNNILSENTSQDFEKVEEDTDRDNFMTADEAKEYGLVDEVIRR 192
>gi|121605848|ref|YP_983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
gi|120594817|gb|ABM38256.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 216
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG + D LLKER++FL ++D A+ +++QLL L++++P KDI
Sbjct: 23 LGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDKDI 82
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L GTKGKRF++PN+RV
Sbjct: 83 SFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSSGTKGKRFSLPNSRV 142
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EI AR+I+ +D RI++ TG++ E++++D +RD +M EA
Sbjct: 143 MIHQPSGGAQGQASDIEIHARDILKTRDQLNRILAHNTGQTVEKIERDTERDYFMFADEA 202
Query: 242 VEYGIIDGVIDR 253
YG++D VI +
Sbjct: 203 KAYGVVDQVISK 214
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 205
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RIV LG IDD VA+ I+SQLL L+++DP K
Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A +AIYD +Q V+ +VST+ +G +AS +++L G KGKR+A+P++
Sbjct: 61 DINLYINSPGGSVTAGLAIYDTMQYVKPNVSTICVGQAASMGAVLLLAGAKGKRYALPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GG GQ D+EIQA+EI+ + +I TG+ E+V+KD DRD +M
Sbjct: 121 RIMIHQPLGGVRGQATDIEIQAKEILRMRAKLNELIVKHTGQPIERVEKDTDRDYFMGAA 180
Query: 240 EAVEYGIIDGV 250
EA YGI+D V
Sbjct: 181 EAKAYGILDEV 191
>gi|227503044|ref|ZP_03933093.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|306836723|ref|ZP_07469686.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
gi|227076105|gb|EEI14068.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|304567401|gb|EFM43003.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
Length = 203
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 120/168 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL ERI+FLG +DD +A+ + +Q+LLL A+DPT+DI L++NSPGGS++A MAIYD ++
Sbjct: 28 LLHERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKY 87
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D+ST +G++AS +L GGTKGKR+A+P+ R+M+HQP G G D+ IQA +
Sbjct: 88 SPCDISTYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQAEQF 147
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
K +I+ TG++FEQ+ KD DRDR+M+ +A EYGI+D VI+
Sbjct: 148 AQTKREMAELIAEHTGQTFEQITKDSDRDRWMTAQQAKEYGIVDHVIE 195
>gi|257870013|ref|ZP_05649666.1| peptidase S14 [Enterococcus gallinarum EG2]
gi|357050271|ref|ZP_09111475.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
saccharolyticus 30_1]
gi|257804177|gb|EEV32999.1| peptidase S14 [Enterococcus gallinarum EG2]
gi|355381758|gb|EHG28874.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
saccharolyticus 30_1]
Length = 196
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L + D +A++II+QLL LDAQD KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A +AI+D + ++ADV T+ +GM+AS S +L G KGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVTAGLAIFDTMNFIKADVQTIVMGMAASMGSFLLTAGEKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI AR I+ ++ +I+S TG+ E ++KD DRD +M+ EA +YG
Sbjct: 125 PLGGAQGQATEIEIAARHILQTRERLNKILSERTGQPIEVIEKDTDRDNFMTAQEAKDYG 184
Query: 246 IIDGVIDRDSI 256
+ID +++ +S+
Sbjct: 185 LIDEIMESNSL 195
>gi|288574917|ref|ZP_06393274.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570658|gb|EFC92215.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 192
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 132/174 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVF+G+ I+D +A+++I+Q+L L++++P KDI ++NSPGGS +A +AIY
Sbjct: 18 DIYSRLLKDRIVFIGDEINDGLANSVIAQMLFLESENPDKDIYFYINSPGGSTTAGLAIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ D+ST+ +G++AS A+++L GT GKR ++P +RVMIHQP GGA G+ D+ I
Sbjct: 78 DTMQYVKCDISTIVVGIAASMAAVLLTAGTAGKRVSLPRSRVMIHQPWGGARGKASDMAI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
Q +EI+H K+ RI++ +G+ F+++ +D ++D YMS EA+ YG++D VIDR
Sbjct: 138 QVKEILHTKETLNRILADHSGQDFDKICEDTEKDFYMSADEAMAYGLVDKVIDR 191
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 124/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+R +F+G IDD VA+ +I+Q+L L+A+DP KDI L++NSPGG ++A MAIY
Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGMAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF++P R+MIHQP+GG GQ D++I
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ +D +++ TG+ E++++D +RD +MS EA EYGIID VI
Sbjct: 140 HAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 127/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLGN I D A+ +I+QLL LDA++P +DI L++NSPGG +S+ +AIY
Sbjct: 19 DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYLYINSPGGYVSSGLAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ADV T+ +G ++S A+L+L GG KGKR A+P++R+M+HQP GGA+GQ D+ I
Sbjct: 79 DTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGATGQASDIAI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
QA+E++ K+ + + TG+ EQ+QKD +RD YM+ EA YGIID VI
Sbjct: 139 QAKEVLKLKEILNGLYTKHTGKPIEQIQKDTERDLYMTAEEAQIYGIIDSVI 190
>gi|386617931|ref|YP_006137511.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NA114]
gi|333968432|gb|AEG35237.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NA114]
Length = 207
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF +PN+RVMI QP+GG GQ D+EI
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIPQPLGGYQGQATDIEI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|406981698|gb|EKE03119.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 135/195 (69%), Gaps = 1/195 (0%)
Query: 60 DVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPT 118
D ++ P + RG + D LL+ERI+FLG IDD VA+ +++QLL LDA++P
Sbjct: 4 DKVINYVPMVIEQSGRGERSFDIFSRLLRERIIFLGTEIDDQVANLMVAQLLFLDAENPE 63
Query: 119 KDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPN 178
KDI +++NSPGG +SA +AIYD +Q VRAD++T+ +G +AS S +L GT GKR ++P+
Sbjct: 64 KDIVMYINSPGGVISAGLAIYDTMQHVRADIATMCIGEAASMGSFLLAAGTAGKRMSLPH 123
Query: 179 TRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSP 238
+R+MIHQP GGA GQ D+ ++A EI K +++ TG+SF+++++D DRD YM P
Sbjct: 124 SRIMIHQPSGGARGQASDIMLEAAEIARIKRQMNELLAKHTGQSFKKIEQDSDRDFYMGP 183
Query: 239 IEAVEYGIIDGVIDR 253
EA EYG+ID +I +
Sbjct: 184 EEAKEYGLIDKIITK 198
>gi|357009615|ref|ZP_09074614.1| ClpP [Paenibacillus elgii B69]
Length = 196
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 123/169 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+ +I+QLL L A DP KDI L++NSPGGS++A M IYD +Q
Sbjct: 24 LLKDRIIFLGSAIDDDVANLVIAQLLFLSAVDPEKDIHLYINSPGGSVTAGMGIYDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +GM+AS SL+L G KGKR+A+PN+ VMIHQP+GG GQ D++I A I
Sbjct: 84 IKPDVSTICVGMAASMGSLLLTAGAKGKRYALPNSEVMIHQPLGGVRGQASDIKIHADWI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K +I TG+ +E++++D DRD +MS +A YG+ID VI R
Sbjct: 144 IKTKQKLNQIYVERTGQPYERIERDTDRDNFMSAEDAKAYGLIDAVITR 192
>gi|333892289|ref|YP_004466164.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
SN2]
gi|332992307|gb|AEF02362.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
SN2]
Length = 209
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 125/176 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKE ++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGGS++A MAIY
Sbjct: 28 DIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DVSTV +G +AS + +L GG KGKR+ +PN+RVMIHQP+GG GQ D EI
Sbjct: 88 DTMNFIKPDVSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
A+EI+ K+ R+++ TG+ +E+V D DRD ++S EA EYG+ID V+ S
Sbjct: 148 HAKEILSIKEKLNRLMAQHTGQDYEKVAHDTDRDNFLSATEAKEYGLIDQVMTNRS 203
>gi|38234363|ref|NP_940130.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|375291443|ref|YP_005125983.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae 241]
gi|376243369|ref|YP_005134221.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|376246279|ref|YP_005136518.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC01]
gi|376249064|ref|YP_005141008.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC04]
gi|376251867|ref|YP_005138748.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC03]
gi|376254881|ref|YP_005143340.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae PW8]
gi|376257680|ref|YP_005145571.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae VA01]
gi|376285279|ref|YP_005158489.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae 31A]
gi|376288283|ref|YP_005160849.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae BH8]
gi|376290972|ref|YP_005163219.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|376293826|ref|YP_005165500.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC02]
gi|419861333|ref|ZP_14383971.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
gi|67460484|sp|Q6NFU4.1|CLPP2_CORDI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|38200626|emb|CAE50322.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
diphtheriae]
gi|371578794|gb|AEX42462.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae 31A]
gi|371581114|gb|AEX44781.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae 241]
gi|371585617|gb|AEX49282.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae BH8]
gi|372104368|gb|AEX67965.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372106611|gb|AEX72673.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|372108909|gb|AEX74970.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC01]
gi|372111149|gb|AEX77209.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC02]
gi|372113371|gb|AEX79430.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC03]
gi|372115632|gb|AEX81690.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae HC04]
gi|372117965|gb|AEX70435.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae PW8]
gi|372120197|gb|AEX83931.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae VA01]
gi|387982402|gb|EIK55909.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
Length = 199
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 120/168 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD +A+ + +Q+LLL A+DPT+DI L++NSPGGS++A MAIYD ++
Sbjct: 24 LLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T +G++AS +L GGTKGKRFA+P+ R+M+HQP G G D+ IQA +
Sbjct: 84 SPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTAADIAIQAEQF 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
K +I+ TG+SFEQ+ KD DRDR+ + +A EYGI+D VI+
Sbjct: 144 AQTKREMAELIAEHTGQSFEQITKDSDRDRWFTAQQAKEYGIVDHVIE 191
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus ducreyi
35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 123/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++QLL L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G + S + +L GG KGKRFA+PN RVMIHQP+GGA GQ D++IQA+EI
Sbjct: 84 IKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ TR ++ +G++F +V D +RD +MS EA YG+ID V+
Sbjct: 144 LKLKEMLTRKMAEHSGQTFAKVAADTERDNFMSATEAKNYGLIDKVL 190
>gi|189219051|ref|YP_001939692.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
gi|189185909|gb|ACD83094.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
Length = 219
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 129/185 (69%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVF+G IDD +A+ +I+QLL L +DP KDI L+++SPGG ++A MAIY
Sbjct: 28 DIFSRLLKDRIVFIGTPIDDNMANLVIAQLLFLQMEDPKKDINLYIHSPGGYVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q + DV+T +G +AS A+++L GTKGKRFA+PN R+MIHQP+GGA GQ D+ I
Sbjct: 88 DTMQFLSCDVNTYCIGQAASMAAVLLAAGTKGKRFALPNARIMIHQPLGGAQGQASDISI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 259
QA+EI+ K I+S T + E+++KD DRD +MS +A YGIID V+ ++
Sbjct: 148 QAQEILRTKRLLNEILSYHTKQPLERIEKDTDRDFFMSAEDAKAYGIIDEVVKTKIMLRP 207
Query: 260 VPVPE 264
VP P+
Sbjct: 208 VPQPQ 212
>gi|359396721|ref|ZP_09189772.1| ATP-dependent Clp protease proteolytic subunit [Halomonas
boliviensis LC1]
gi|357969399|gb|EHJ91847.1| ATP-dependent Clp protease proteolytic subunit [Halomonas
boliviensis LC1]
Length = 205
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + +G A D LLKER++FL ++D++A+ +++QLL L++++P KDI L++
Sbjct: 14 PMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHLYI 73
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q V+ DVSTV +G +AS +L+L G GKR+ +PN+RVMIHQ
Sbjct: 74 NSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQ 133
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ ++ +I++ TG+ E V +D DRD +MS A EYG
Sbjct: 134 PLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIEAVSRDTDRDNFMSANTAKEYG 193
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 194 LIDAVLDK 201
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 131/183 (71%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG + ++ I++Q+L L+A+DP +DI L++NSPGGS+
Sbjct: 11 RGERAFDIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYLYINSPGGSVY 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ I+D + ++ DVST+ +G++AS + +L GTKGKR ++PN+R+MIHQP+GGA GQ
Sbjct: 71 DGLGIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI++ K ++ TG+ E++ +D +RD +MSP EAVEYG+ID VIDR
Sbjct: 131 ATDIEIQAKEILYIKKTLNDALAAHTGQPIERITEDTERDFFMSPSEAVEYGLIDQVIDR 190
Query: 254 DSI 256
+I
Sbjct: 191 HAI 193
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 125/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +I+QLL L+A+DP KDI L++NSPGG ++A MAIYD +Q
Sbjct: 23 LLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++A VST+ +G +AS +L+L GG KGKRF++ ++R+MIHQP+GG GQ D+ I A+EI
Sbjct: 83 IKAPVSTICVGQAASMGALLLSGGEKGKRFSLTHSRIMIHQPLGGFQGQATDIHIHAQEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K II+ +G++ E+V+ D +RD +MS EA YGIID +I R
Sbjct: 143 LKMKKRLNEIIAENSGQALEKVEADTERDYFMSGEEAKSYGIIDAIIAR 191
>gi|377555720|ref|ZP_09785448.1| ATP-dependent Clp protease proteolytic subunit [endosymbiont of
Bathymodiolus sp.]
Length = 197
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P + RG A D LLKER++F+ ++D++A+ I++Q+L L++++P KDI
Sbjct: 5 LNQIPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANVIVAQMLFLESENPDKDI 64
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA +AIYD +Q ++ DVST+ +G +AS +L+L G K KR+A+PN R
Sbjct: 65 HLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRYALPNARC 124
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG SGQ D++I A+EI+ ++ I+ TG+S + +QKD DRD +MS EA
Sbjct: 125 MIHQPLGGFSGQASDIDIHAQEILKVREKLNTILKSHTGQSIKTIQKDTDRDNFMSADEA 184
Query: 242 VEYGIIDGVIDR 253
+YG+ID V+ +
Sbjct: 185 AKYGLIDKVLKQ 196
>gi|356534756|ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like isoform 1 [Glycine max]
Length = 303
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 126/167 (75%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G +DD +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 115 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRH 174
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA G D++IQA E+
Sbjct: 175 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 234
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+H+K N ++ TG+S +++ +D DRD +MS EA EYG+IDGVI
Sbjct: 235 LHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVI 281
>gi|350546001|ref|ZP_08915432.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Burkholderia kirkii UZHbot1]
gi|350526222|emb|CCD41030.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Burkholderia kirkii UZHbot1]
Length = 217
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P T+ RG A D LLKER+VFL ++D A+ +++QLL L++++P KDI
Sbjct: 24 LGLVPMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESENPDKDI 83
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR +PN RV
Sbjct: 84 SLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCIGLAASMGAFLLAAGAKGKRVTLPNARV 143
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D+EIQAREI++ K+ +++S TG+ E++ +D DRD +MS +A
Sbjct: 144 MIHQPLGGTRGQASDIEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFMSGDDA 203
Query: 242 VEYGIIDGVI 251
YG++D V+
Sbjct: 204 QAYGLVDQVL 213
>gi|237753395|ref|ZP_04583875.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
gi|229375662|gb|EEO25753.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
Length = 196
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L IDD +A +I++QLL L+A+DP KDI L++NSPGG ++
Sbjct: 14 RGERAYDIYSRLLKDRIILLSGQIDDGLASSIVAQLLFLEAEDPEKDIYLYINSPGGVVT 73
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ ++IYD + V+ D+ST+ +G +AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ
Sbjct: 74 SGLSIYDTMNYVKPDISTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGQ 133
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
++EIQA+EI+ K + I++ T + E++ KD DRD Y+S EA EYG+ID V+++
Sbjct: 134 ATEIEIQAKEILRLKSSLNEILASNTNQPLEKIAKDTDRDFYLSAKEAQEYGLIDSVLEK 193
>gi|443320140|ref|ZP_21049261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442790136|gb|ELR99748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 233
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 128/174 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LL+ERI+F+G IDD +A+++ +QLL L+A+D KDI++++NSPGGS+ A MAIY
Sbjct: 47 DIYSRLLRERIIFIGTPIDDTLANSVTAQLLFLEAEDSEKDIQIYINSPGGSVYAGMAIY 106
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ V DV+T+ G++AS + +L GGT GKR A+PN R+MIHQP+GGA GQ D++I
Sbjct: 107 DTMRQVAPDVATICYGIAASMGAFLLSGGTNGKRMALPNARMMIHQPLGGAQGQASDIQI 166
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QAREI++ K ++++ TG++ E+V D +RD YMS +A EYG+ID VI +
Sbjct: 167 QAREILYIKKRLNQLLAEHTGQTLEKVSMDTERDFYMSSEKAKEYGLIDQVIHK 220
>gi|304407481|ref|ZP_07389133.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304343432|gb|EFM09274.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 193
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG+ IDD VA++II+QLL L A DP KDI L++NSPGGS++A M I+
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSIIAQLLFLAADDPEKDIHLYINSPGGSVTAGMGIF 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS SL+L G KGKRF++PN+ VMIHQP+GG GQ D++I
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGSLLLTAGAKGKRFSLPNSEVMIHQPLGGVRGQASDIKI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A I+ K +I TG+ +E++++D DRD ++S EAV YG+ID V+
Sbjct: 139 HADWIIKTKQKLNQIYVERTGQPYEKIERDTDRDNFLSAEEAVAYGLIDKVV 190
>gi|310778378|ref|YP_003966711.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
gi|309747701|gb|ADO82363.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
Length = 199
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RI+FLG IDD VA++I++QLL L+A+D KDI +++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLRDRIIFLGTEIDDRVANSIVAQLLFLEAEDAEKDIIMYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
MAIYD + ++ DV TV +G +AS +L+L GT GKR+++ N+R+MIHQP+GGA GQ
Sbjct: 72 GGMAIYDTMNYIKPDVQTVCIGQAASMGALLLTAGTPGKRYSLENSRIMIHQPLGGARGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
D+ IQA+EI+ K+ ++IIS TG+ F++V +D +RD+YM+P EA EYG++D V
Sbjct: 132 ATDIAIQAKEILKMKELTSQIISKTTGQPFDKVMEDTERDKYMNPYEAKEYGLVDHV 188
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RIV LG IDD V++AI+SQLL L+++DP K
Sbjct: 1 MPFMPIPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +++L G KGKR+++P++
Sbjct: 61 DINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GG GQ D+EIQA+EI+ + +I TG+ E+V+KD DRD YM
Sbjct: 121 RIMIHQPLGGVRGQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGAT 180
Query: 240 EAVEYGIIDGV 250
E+ YGIID +
Sbjct: 181 ESKAYGIIDEI 191
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 128/174 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+G IDD +A+ +++QLL L+++DP KD+ L++NSPGG ++A +AIY
Sbjct: 20 DIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKDVYLYINSPGGVVTAGLAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ VST+ G +AS A+++L G +GKR ++P++R+MIHQP+GGA GQ D+EI
Sbjct: 80 DTMQYIKCPVSTICTGQAASMAAVLLAAGERGKRISLPHSRIMIHQPLGGAQGQASDIEI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QAREI+ K+ I+S TG+ E++ +D DRD +MS EA YGI+D VI++
Sbjct: 140 QAREILRVKEILNSILSNHTGQPLERIARDTDRDFFMSADEACAYGIVDKVIEK 193
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 126/172 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +I+QLL L+A+DP KDI L++NSPGG ++A MAIYD ++
Sbjct: 23 LLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++A VST+ +G +AS + +L GG KGKR+++ N+R+MIHQP+GG GQ D+ I A+EI
Sbjct: 83 IKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ KD +++ TG+S E+V D +RD +MS EA YGIID ++ R+ +
Sbjct: 143 LRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIVTRNVV 194
>gi|307102787|gb|EFN51055.1| hypothetical protein CHLNCDRAFT_141566 [Chlorella variabilis]
Length = 258
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 126/169 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L +RIV LG +DD +A+ I++QLL LD+ DP +DI L++NSPGGS++A MA++D ++
Sbjct: 84 LFSQRIVRLGGPVDDDMANLIVAQLLYLDSADPNRDITLYINSPGGSVTAGMAVFDTMRH 143
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R +VSTV +G++AS + +L G +GKR+++PN+R+MIHQP+GGA GQ D+EIQA EI
Sbjct: 144 IRPNVSTVCVGLAASMGAFLLASGHQGKRYSLPNSRIMIHQPLGGAQGQAADIEIQANEI 203
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+H+K ++ FTG+S + + D DRD +MS EAVEYG+ID V+ +
Sbjct: 204 LHHKLTLNGYLAEFTGQSMDTITADTDRDFFMSAQEAVEYGLIDAVVSK 252
>gi|299471219|emb|CBN79074.1| chloroplast clp protease P [Ectocarpus siliculosus]
Length = 292
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
Query: 55 QQRQHDVPLSSAP-QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLD 113
+++ D P + P + P + G++ D + LLK+RI+ LG ++D VA+ +++QLL L
Sbjct: 76 RRKDPDRPAEAPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLA 135
Query: 114 AQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKR 173
DP KDI L++NSPGGS+SA MAIYD +Q V DVSTV G +AS + +LG G KGKR
Sbjct: 136 NDDPDKDITLYINSPGGSVSAGMAIYDAMQYVPCDVSTVCFGTAASMGAFLLGAGAKGKR 195
Query: 174 FAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRD 233
++PN R+MIHQP+GGA GQ D+EIQA+EI+ + ++ + + +++Q D DRD
Sbjct: 196 RSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCDQPADKIQDDCDRD 255
Query: 234 RYMSPIEAVEYGIIDGVI 251
+M+P EA++YG+ID V+
Sbjct: 256 FFMTPEEAMDYGLIDEVV 273
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+P P RG + D LLK+RIV LG IDD VA+ I++QLL L+++DP K
Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +++L G KGKR+A+P++
Sbjct: 61 DINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSS 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
R+MIHQP+GG GQ D+EIQA+EI+ K +I T +S E+V+KD DRD +M
Sbjct: 121 RIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTAQSIERVEKDTDRDYFMGAS 180
Query: 240 EAVEYGIIDGVIDRDSIIPL 259
EA YGIID + + ++ L
Sbjct: 181 EAKAYGIIDEIQNPRKVVGL 200
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 124/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FLG ++D AD I++QLL L+A+DP KDI+L++NSPGG++SA AIY
Sbjct: 19 DIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAEDPDKDIQLYINSPGGAVSAGFAIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS + +L G KGKRF++PN+ +MIHQP+GG GQ D+ I
Sbjct: 79 DTMQYIKPDVSTICIGRAASMGAFLLAAGAKGKRFSLPNSDIMIHQPLGGTQGQAEDIRI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A +I+ ++ +I+S TG+ E++ +D DRD +M+ EA EYGIID VI
Sbjct: 139 HAEKIIQTRELINKILSERTGQPLEKISRDTDRDFFMTAKEAKEYGIIDKVI 190
>gi|15615680|ref|NP_243984.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|18203165|sp|Q9K888.1|CLPP2_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|10175740|dbj|BAB06837.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIVFLG IDD +A++I++QLL L+A++P KDI L++NSPGGS SA AIY
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPGGSTSAGFAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ + T+ GM+AS A+++L GTKGKRFA+PN+ +MIHQP GGA GQ D+ I
Sbjct: 80 DTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSEIMIHQPSGGAQGQASDLAI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+ I+ ++ + S TG+S E+V KD+DRD +MS EA+EYGI+D +I
Sbjct: 140 TAKRILGIREKLVTVTSERTGQSPEKVAKDMDRDYFMSAEEALEYGIVDQII 191
>gi|344943167|ref|ZP_08782454.1| ATP-dependent Clp protease proteolytic subunit [Methylobacter
tundripaludum SV96]
gi|344260454|gb|EGW20726.1| ATP-dependent Clp protease proteolytic subunit [Methylobacter
tundripaludum SV96]
Length = 215
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 128/167 (76%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D+ A+ I++QLL L++++P KDI L++NSPGGS++A M+IYD +Q
Sbjct: 40 LLKERVIFLVGQVEDYSANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQF 99
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS +L+L GG KGKR+ +P++R+MIHQP+GG GQ D++I AREI
Sbjct: 100 IKPDVSTMCIGQAASMGALLLAGGAKGKRYCLPHSRMMIHQPLGGYQGQASDIDIHAREI 159
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ ++ +I+S TG+ E+VQ+D DRD ++S +AV YG+ID V+
Sbjct: 160 LLIREKLNKILSDHTGQPMEKVQQDTDRDNFLSANDAVSYGLIDQVL 206
>gi|294500553|ref|YP_003564253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|294350490|gb|ADE70819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
Length = 193
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S+ P + RG + D LLK+RI+ +G+ I+D +A+++++QLL L A DP KDI
Sbjct: 1 MSTIPYVIEQSNRGERSYDIYSRLLKDRIILIGDEINDHIANSVVAQLLFLAADDPKKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS SA AIYD +Q + DV T+ GM+AS +L+L G KGKR+A+PN+ +
Sbjct: 61 SLYINSPGGSTSAGFAIYDTMQYIEPDVQTICTGMAASFGALLLLAGAKGKRYALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ ++EI AR I+ K + IIS TG+ E+V D +RD +MS EA
Sbjct: 121 MIHQPLGGARGQATEIEISARRILKLKQHINEIISTRTGQPVEKVANDTERDYFMSAEEA 180
Query: 242 VEYGIIDGVI 251
EYG+IDG++
Sbjct: 181 KEYGVIDGIL 190
>gi|160331468|ref|XP_001712441.1| clpP2 [Hemiselmis andersenii]
gi|159765889|gb|ABW98116.1| clpP2 [Hemiselmis andersenii]
Length = 233
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 153/234 (65%), Gaps = 15/234 (6%)
Query: 28 KSLPLSFKPISSVKTRRISTKTLALQQQQRQHDV---PLSSAPQTPATAMR--GA----E 78
+SL S P + ++S K ++ + Q Q DV P+ P A R GA
Sbjct: 2 QSLLFSLCPF--YHSSKLSIKNYSVSKNQSQKDVFMMPIG----VPKVAYRVPGAPSADW 55
Query: 79 ADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAI 138
D L +ERI+FLG IDD +A+ II+ +L LD++D +K I L++NSPGGS+ + +A+
Sbjct: 56 VDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSEDNSKPIYLYINSPGGSVISGLAM 115
Query: 139 YDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVE 198
YD ++ ++++V T+ +G++AS AS IL G KGKR A+P++R+MIHQPMGGA GQ D++
Sbjct: 116 YDTIRHIKSEVVTINVGLAASMASFILAAGEKGKRLALPHSRIMIHQPMGGAQGQASDIK 175
Query: 199 IQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
++A++I+ + + T + TGR +E+V +D+DRD +MS EAVEYG+ID VI+
Sbjct: 176 VEAQQILRIRKSLTEDYAQMTGRPYEKVLQDMDRDNFMSAYEAVEYGLIDRVIE 229
>gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
Length = 222
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 131/200 (65%), Gaps = 1/200 (0%)
Query: 53 QQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLL 111
Q+ +H + P RG + D LLK+RI+F+G IDD VA+ +I+QLL
Sbjct: 8 QRTANRHHIVSYYVPIVLENTGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLF 67
Query: 112 LDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKG 171
L +DP KDI L++NSPGG ++ MAIYD + ++ DV T +G +AS A+++L GTKG
Sbjct: 68 LQMEDPKKDIHLYINSPGGVVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSAGTKG 127
Query: 172 KRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDID 231
KRFA+PN+RVMIHQP GGA GQ D+ I A+EI+ + + I+ TG++ EQV KD D
Sbjct: 128 KRFALPNSRVMIHQPSGGAGGQAADITIAAKEILRWRRTLSETIARHTGKTPEQVDKDSD 187
Query: 232 RDRYMSPIEAVEYGIIDGVI 251
RD Y+S EA +YG++D V+
Sbjct: 188 RDYYLSAQEAKDYGLVDHVV 207
>gi|126700971|ref|YP_001089868.1| ATP-dependent Clp protease proteolytic subunit 2 [Clostridium
difficile 630]
gi|254976933|ref|ZP_05273405.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094319|ref|ZP_05323797.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255102503|ref|ZP_05331480.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
gi|255308399|ref|ZP_05352570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316073|ref|ZP_05357656.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518732|ref|ZP_05386408.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651852|ref|ZP_05398754.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|260684879|ref|YP_003216164.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688537|ref|YP_003219671.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|306521636|ref|ZP_07407983.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362546|ref|YP_006200398.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423089882|ref|ZP_17078228.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252408|emb|CAJ70250.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Clostridium difficile 630]
gi|260211042|emb|CBA66381.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214554|emb|CBE07092.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|357557468|gb|EHJ39008.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 126/170 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+F+G I+D +A +++QLL L+++DP DI +++NSPGGS ++ AIYD +
Sbjct: 24 LLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSATSGFAIYDTMNY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
VR DVST+ +GM+AS ++ +L GGT GKR A+PN+ +MIHQPMGGA GQ DV+I I
Sbjct: 84 VRCDVSTICIGMAASMSAFLLAGGTHGKRCALPNSEIMIHQPMGGAKGQATDVKIAVDNI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 254
+ K+ +I+S TG+S E +++D DRD +M+ +EA EYG+ID +++R+
Sbjct: 144 LKIKERLDKILSENTGKSIEDIRRDTDRDNFMTALEAKEYGLIDYIMNRN 193
>gi|347530949|ref|YP_004837712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
hominis A2-183]
gi|345501097|gb|AEN95780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
hominis A2-183]
Length = 201
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 121/169 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG +++ A +++QLL L+++DP KDI+L++NSPGG ++A MAIYD +Q
Sbjct: 24 LLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIQLYINSPGGMVTAGMAIYDTMQY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G++AS + +L GGTKGKR+A+PN VMIHQP GGA GQ +++I A I
Sbjct: 84 IKCDVSTICIGLAASMGAFLLAGGTKGKRYALPNAEVMIHQPSGGAKGQATEIQIAAENI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K I++ TG+ ++ V D +RD YMS EA YG+ID VI R
Sbjct: 144 LKTKKKLNEILAANTGKPYDVVAADTERDYYMSAEEAKAYGLIDDVIIR 192
>gi|315037919|ref|YP_004031487.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL 1112]
gi|325956392|ref|YP_004291804.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus 30SC]
gi|385817273|ref|YP_005853663.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL1118]
gi|312276052|gb|ADQ58692.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL 1112]
gi|325332957|gb|ADZ06865.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus 30SC]
gi|327183211|gb|AEA31658.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL1118]
Length = 194
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ I+ TG+ +++QKD +RD Y++ EA EYG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLDKIQKDTERDNYLTAEEAKEYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDEIM 189
>gi|332686182|ref|YP_004455956.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius ATCC 35311]
gi|379727776|ref|YP_005319961.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius DAT561]
gi|332370191|dbj|BAK21147.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius ATCC 35311]
gi|376318679|dbj|BAL62466.1| ATP-dependent Clp protease proteolytic subunit [Melissococcus
plutonius DAT561]
Length = 198
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RIV L IDD V++++I+QLL LDAQD KDI L++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIVMLSGPIDDNVSNSVIAQLLFLDAQDSEKDIYLYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA +AI+D + V+ADV T+ LG++AS S +L G KGKRFA+PN +MIHQ
Sbjct: 65 NSPGGSVSAGLAIFDTMNFVKADVQTIVLGIAASMGSFLLTAGQKGKRFALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ ++EI A+ I++ ++ +I+S TG+ E ++KD DRD +M+ EA YG
Sbjct: 125 PLGGAQGQATEIEIAAKHILNTRERLNKILSERTGQPIEVIEKDTDRDNFMTAEEAKAYG 184
Query: 246 IIDGVID 252
+ID V++
Sbjct: 185 LIDDVME 191
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 129/174 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+F+G IDD +++ +++QLL L+++DP KD+ +++NSPGG ++A +AIY
Sbjct: 25 DIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESEDPDKDVFVYINSPGGVVTAGLAIY 84
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ VST+ +G +AS A+++L G KGKR +P++R+MIHQP+GGA GQ D+EI
Sbjct: 85 DTMQYVKCPVSTICVGQAASMAAVLLSAGEKGKRICLPHSRIMIHQPLGGAQGQASDIEI 144
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QA+EI+ K+ I+S TG+ +++ KD DRD +MS EA+ YGI+D VIDR
Sbjct: 145 QAKEILRMKEILNSILSNHTGQPMDRIAKDTDRDFFMSAEEAMAYGIVDKVIDR 198
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG A D LLK+RIVF+G IDD +A +I+QLL L+++DP KDI
Sbjct: 1 MSLVPIVIEQTNRGERAYDIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A +AIYD +Q ++ DVST+ +GM+AS +++L GG GKR A+PN+R+
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG G+ LD+E A+EI+ ++ I+ T + E++++D +RD +MS +EA
Sbjct: 121 MIHQPWGGVQGRALDIETHAKEILRLREVLNEILVKHTKQPLERIERDTERDYFMSAVEA 180
Query: 242 VEYGIIDGVI 251
+YG+ID VI
Sbjct: 181 KQYGLIDEVI 190
>gi|291614263|ref|YP_003524420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
gi|291584375|gb|ADE12033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
Length = 208
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG A D LLKER+VFL ++D A+ I++Q+L L++++P KDI ++
Sbjct: 19 PMVVESSGRGERAYDIYSRLLKERVVFLVGEVNDHTANLIVAQMLFLESENPDKDIHFYI 78
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA MAIYD +Q ++ VST+ +GM+AS + +L G KGKRFA+PN+ VMIHQ
Sbjct: 79 NSPGGSISAGMAIYDTMQFIKPQVSTLCIGMAASMGAFLLQAGAKGKRFALPNSTVMIHQ 138
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI AR I+ ++ +++ TGR+ E++ +D +RD ++S EAVEYG
Sbjct: 139 PLGGFRGQASDIEIHARYILSLRERLYALMAQHTGRTVEEIARDSERDNFLSAKEAVEYG 198
Query: 246 IIDGVIDR 253
++D V+D+
Sbjct: 199 LVDQVLDK 206
>gi|222624791|gb|EEE58923.1| hypothetical protein OsJ_10573 [Oryza sativa Japonica Group]
Length = 282
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 102 LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKH 161
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 162 IRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 221
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI + + L P+P
Sbjct: 222 LHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVI-MNPLKALQPLP 279
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 126/172 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG IDD VA+ +I+QLL L+A+DP KDI L++NSPGG ++A MAIYD ++
Sbjct: 23 LLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++A VST+ +G +AS + +L GG KGKR+++ N+R+MIHQP+GG GQ D+ I A+EI
Sbjct: 83 IKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATDIHIHAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
+ KD +++ TG+S E+V D +RD +MS EA YGIID ++ R+ +
Sbjct: 143 LRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIVTRNVV 194
>gi|297600816|ref|NP_001049902.2| Os03g0308100 [Oryza sativa Japonica Group]
gi|63003513|dbj|BAD98161.1| ATP-dependent protease [Oryza sativa Japonica Group]
gi|108707751|gb|ABF95546.1| ATP-dependent Clp protease proteolytic subunit 1, putative,
expressed [Oryza sativa Japonica Group]
gi|215740983|dbj|BAG97478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765780|dbj|BAG87477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674452|dbj|BAF11816.2| Os03g0308100 [Oryza sativa Japonica Group]
Length = 282
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 102 LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKH 161
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 162 IRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 221
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI + + L P+P
Sbjct: 222 LHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVI-MNPLKALQPLP 279
>gi|430743442|ref|YP_007202571.1| protease subunit of ATP-dependent protease [Singulisphaera
acidiphila DSM 18658]
gi|430015162|gb|AGA26876.1| protease subunit of ATP-dependent protease [Singulisphaera
acidiphila DSM 18658]
Length = 204
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 129/191 (67%), Gaps = 3/191 (1%)
Query: 76 GAEADAMGL---LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSL 132
G E AM + LL++RI+ LG+ IDD V++ I++Q+L+L QD DI L++NSPGGS+
Sbjct: 12 GREERAMDIYSRLLQDRIIILGSAIDDNVSNLIVAQMLVLAHQDAKADIHLYINSPGGSV 71
Query: 133 SATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASG 192
+A MAIYD +Q V DV+T +G AS SL+L G KGKR A+P+ R+MIHQP+ G G
Sbjct: 72 TAGMAIYDTMQWVSCDVATYCIGQCASMGSLLLAAGAKGKRNALPHGRIMIHQPLAGMEG 131
Query: 193 QVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
D+ I A E + K +I TG++ E++Q+D DRDR+MSP E+ +YG+ID V+D
Sbjct: 132 TATDILIHAEEFLRMKKQLNQIYQKHTGQTLEKLQEDTDRDRFMSPEESRDYGLIDNVVD 191
Query: 253 RDSIIPLVPVP 263
R+ IPL P P
Sbjct: 192 REPSIPLNPNP 202
>gi|398847904|ref|ZP_10604778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
gi|398250862|gb|EJN36154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
Length = 213
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ +++QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVST+ +G + S + +L G KGKR +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI++ K +++ TG+ E +++D +RD +MS A EYG
Sbjct: 141 PLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDTERDNFMSASRAAEYG 200
Query: 246 IIDGVIDRDSII 257
+ID V D+ ++
Sbjct: 201 LIDSVYDKRQLV 212
>gi|297538721|ref|YP_003674490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
versatilis 301]
gi|297258068|gb|ADI29913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
versatilis 301]
Length = 219
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 141/206 (68%), Gaps = 4/206 (1%)
Query: 51 ALQQQQRQHDVP---LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAII 106
++QQ Q + D+ L P + RG + D LLKER++FL ++D A+ ++
Sbjct: 8 SMQQPQAELDISPQGLGYIPMVVEQSGRGERSYDIYSRLLKERVIFLVGPVNDMSANLVV 67
Query: 107 SQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILG 166
+QLL L+A++P KDI L++NSPGGS++A M+IYD +Q ++ADVST+ +G +AS + +L
Sbjct: 68 AQLLFLEAENPDKDISLYINSPGGSVTAGMSIYDTMQFIKADVSTLCIGQAASMGAFLLA 127
Query: 167 GGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQV 226
G KGKRF++PN+RVMIHQP GG GQ D+EI A+EI++ + I++ TG++ ++
Sbjct: 128 AGAKGKRFSLPNSRVMIHQPSGGFQGQSTDIEIHAKEILYLRAKLNDILAHHTGKTAAEI 187
Query: 227 QKDIDRDRYMSPIEAVEYGIIDGVID 252
+D +RD +MS ++VEYG+ID VI+
Sbjct: 188 DRDTERDNFMSATQSVEYGMIDKVIE 213
>gi|418007554|ref|ZP_12647436.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
UW4]
gi|410548793|gb|EKQ22981.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
UW4]
Length = 196
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L ++D +A+++I+QLL LDAQD KDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +A+ D + +++DV T+A+GM+AS AS++L GGTKGKRFA+PN+ ++IHQP GGA GQ
Sbjct: 72 SGLAMLDTINFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A EI+ + +I++ TG++ EQ++KD +RD YMS EA +YG+ID ++
Sbjct: 132 QTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKDYGLIDDIL 189
>gi|431795130|ref|YP_007222035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785356|gb|AGA70639.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 202
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG + D VA+ I++QLL L+A+DP KDI L++NSPGGS+SA MAIYD +Q
Sbjct: 25 LLKDRIIFLGGPVSDDVANVIVAQLLFLEAEDPEKDIFLYINSPGGSISAGMAIYDTMQY 84
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM---GGASGQVLDVEIQA 201
+R DV T+ +G++AS + +L G KGKR A+PN ++IHQP+ GG SGQ ++EI A
Sbjct: 85 IRPDVHTICVGLAASMGAFLLTAGAKGKRTALPNAEILIHQPLIGGGGISGQATEIEIHA 144
Query: 202 REIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ ++ K+ RI++ TG++FEQ++ D DRDRYM+ EA YG+ID V+++
Sbjct: 145 KHLLRIKERMNRILAERTGQAFEQIEADTDRDRYMTAEEAKTYGLIDEVLEK 196
>gi|334143754|ref|YP_004536910.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalimicrobium
cyclicum ALM1]
gi|333964665|gb|AEG31431.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalimicrobium
cyclicum ALM1]
Length = 201
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLKER++FL ++D +A+ I++Q+L L++++P KDI L++
Sbjct: 12 PMVVEQTSRGERAFDIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESENPEKDIHLYI 71
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD ++ ++ DVST+ LG +AS S +L G KGKRFA+PN+RVMIHQ
Sbjct: 72 NSPGGSVTAGMAIYDTMRFIKPDVSTMCLGQAASMGSFLLAAGAKGKRFALPNSRVMIHQ 131
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D EI AREI++ KD + +S TG+ E +++D DRD +MS +A +YG
Sbjct: 132 PLGGFQGQASDFEIHAREILYIKDKLNKALSENTGQPIEVIEQDTDRDNFMSAEKAKDYG 191
Query: 246 IIDGVIDR 253
+ID V+ +
Sbjct: 192 LIDQVLAK 199
>gi|237745591|ref|ZP_04576071.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS]
gi|229376942|gb|EEO27033.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS]
Length = 207
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 59 HDVPLSSA-----PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLL 112
HD L ++ P + RG A D LLKERI+FL + D A+ I++QLL L
Sbjct: 5 HDSALDTSMLGMIPMVIEQSGRGERAFDIYSRLLKERIIFLVGPVTDQNANLIVAQLLFL 64
Query: 113 DAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGK 172
++++P KDI L++NSPGGS+SA MAIYD +Q +R VST+ G++AS + +L G KGK
Sbjct: 65 ESENPEKDISLYINSPGGSVSAGMAIYDTMQFIRPQVSTLCTGLAASMGAFLLAAGAKGK 124
Query: 173 RFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDR 232
RF++PN+R+MIHQP GGA GQ D+EI AREI++ ++ I++ TG+ EQ+ +D +R
Sbjct: 125 RFSLPNSRIMIHQPSGGAQGQATDIEIHAREILYLRERLNGILAENTGKPVEQIARDTER 184
Query: 233 DRYMSPIEAVEYGIIDGVIDR 253
D +MS EA +YG+ID V+ R
Sbjct: 185 DNFMSAAEAKDYGLIDEVLTR 205
>gi|428319265|ref|YP_007117147.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428242945|gb|AFZ08731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 202
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RIVFLG +D +A+ I++QLL LDA+DP KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYLNSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R DV T+ LG++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNHIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ ++++D +RD +MS EA +YG++D VIDR
Sbjct: 131 ATDIEIQAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVDQVIDR 190
>gi|403049603|ref|ZP_10904087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86D]
Length = 204
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG + D LLKER++FL +DD++++ +++QLL L++++P KDI +++
Sbjct: 10 PMVIEQTARGERSFDIYSRLLKERVIFLSGPVDDYMSNVVVAQLLFLESENPEKDISIYI 69
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA +AIYD +Q V +ST+ +G +AS +++L GG KGKRFA+PN+R+MIHQ
Sbjct: 70 NSPGGSISAGLAIYDTMQFVSPTISTLCIGQAASMGAILLAGGNKGKRFALPNSRIMIHQ 129
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D EI A+EI+H K I++ TG++ ++++KD DRD ++ A++YG
Sbjct: 130 PLGGFQGQASDFEIHAKEILHMKKIVNEILAKHTGQTIKKIEKDTDRDNFLDAPAAIKYG 189
Query: 246 IIDGVID-RDSI 256
I+D +++ RD +
Sbjct: 190 IVDNILNSRDKV 201
>gi|428224315|ref|YP_007108412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427984216|gb|AFY65360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 197
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 127/173 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +ERI+FLG ++DD +A+ II+ +L LD++DP KDI L++NSPGG ++A MAIY
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIILYINSPGGMVTAGMAIY 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V++DV T+ +G++AS S +L GTKGKR A+P++R+MIHQP GG GQ D+EI
Sbjct: 82 DTMQHVKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+AREI+ + I + TG+ E+++KD+DRD +MS EA EYG+ID VI+
Sbjct: 142 EAREILRIRQELNGIYAKNTGQPIEKIEKDMDRDFFMSAYEAKEYGLIDRVIE 194
>gi|428770773|ref|YP_007162563.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685052|gb|AFZ54519.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 196
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LL+ERI+FLG + D +A+++++QLLLL+A+DP KDI L++
Sbjct: 3 PTVIETSGRGDRAFDIYSRLLRERIIFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA + I+D + ++ DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGLGIFDTMNQIKPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K ++ TG+ +++++D +RD +MS EA +YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKKQLNHYMASHTGQPLDKIEEDTERDFFMSAEEARDYG 182
Query: 246 IIDGVIDRDSI 256
+ID V+ R I
Sbjct: 183 LIDRVVIRSQI 193
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKERI+FLG IDD VA+ +++QLL L+++DP KDI L++
Sbjct: 6 PMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYI 65
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG ++A +AIYD +Q ++ DVST+ +G +AS S++L G GKR+A+P+ R+MIHQ
Sbjct: 66 NSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQ 125
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++IQA+EI+ ++ I++ TG+ E++ D +RD +MS EA EYG
Sbjct: 126 PLGGAQGQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKEYG 185
Query: 246 IIDGVIDRDSIIP 258
+ID V+ R P
Sbjct: 186 LIDEVVTRPKAAP 198
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG A D LLK+RIVFLG+ I+D A +I+Q+L L+A+DP KDI
Sbjct: 4 MSLVPIVVEQTNRGERAYDIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDI 63
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A +AIYD +Q ++ DV T+ +GM+AS A+ +L G KGKRFA+PN+ +
Sbjct: 64 WLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 123
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG GQ D++I A ++ +D RI+S TG+ E+++ D++RD +M+ EA
Sbjct: 124 MIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEA 183
Query: 242 VEYGIIDGVIDR 253
YGIID ++ R
Sbjct: 184 KTYGIIDDILVR 195
>gi|407003892|gb|EKE20402.1| hypothetical protein ACD_8C00005G0001 [uncultured bacterium]
Length = 195
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 130/172 (75%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FLG IDD VA+AII+QLL L+ Q+P +DI++++NSPGGS+S+ +AIY
Sbjct: 22 DIYSRLLKDRIIFLGTAIDDGVANAIIAQLLFLEQQNPKEDIKIYINSPGGSVSSALAIY 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ADV T+ +G++AS A+L+L G KGKRFA+PN+ VMIHQ MGGASGQ DV I
Sbjct: 82 DTMQYIKADVQTICVGIAASAAALLLASGKKGKRFALPNSEVMIHQVMGGASGQASDVNI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+ I+ KD I++ TG+ +V+KD DRD +MS EAV+YGI+D VI
Sbjct: 142 HAQHILKTKDKLNAIMAKHTGQKIVKVEKDTDRDNFMSANEAVKYGIVDKVI 193
>gi|387131588|ref|YP_006294478.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
gi|386272877|gb|AFJ03791.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
Length = 211
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 128/172 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +A+ I++QLL L++++P KDI L++NSPGG+++A +AIY
Sbjct: 32 DIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGAVTAGLAIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G +AS +L+L G GKRFA+PN+R+M+HQP+GG GQ D++I
Sbjct: 92 DTMQFIKPDVSTLCIGQAASMGALLLTAGAAGKRFALPNSRMMVHQPLGGFQGQASDIDI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ +D RI+S TG+ EQ++KD DRD +M+ +A +YG+ID V+
Sbjct: 152 HAKEILSIRDRLNRIMSHHTGQKIEQIEKDTDRDNFMNGEQAAKYGLIDSVL 203
>gi|363420188|ref|ZP_09308282.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus
pyridinivorans AK37]
gi|359735984|gb|EHK84935.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus
pyridinivorans AK37]
Length = 195
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 120/169 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD +A+ + +Q+LLL A+DPT+DI L++NSPGGS++A MAIYD ++
Sbjct: 18 LLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKF 77
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V DV+T A+G++AS +L GTKGKR+A+P+ R+M+HQP G G D+ I A +
Sbjct: 78 VECDVATFAMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGIGGTASDIAIMAEQF 137
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
H K +I+ TG+S EQ+ KD DRDR+ + +A+EYG +D V+ R
Sbjct: 138 AHTKREMAELIAEHTGQSVEQITKDSDRDRWFTAQQALEYGFVDHVVSR 186
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RIVFLG +D +A+ I++QLL LDA+DP KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + +R D+ T+ LG++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNHIRPDICTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI+++K ++ TG+ ++++D +RD +MS EA +YG++D VIDR
Sbjct: 131 ATDIEIQAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVDQVIDR 190
>gi|292487467|ref|YP_003530339.1| ATP-dependent Clp protease proteolytic subunit ClpP [Erwinia
amylovora CFBP1430]
gi|292898709|ref|YP_003538078.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|428784402|ref|ZP_19001893.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
gi|291198557|emb|CBJ45665.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552886|emb|CBA19931.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora CFBP1430]
gi|312171571|emb|CBX79829.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ATCC BAA-2158]
gi|426275964|gb|EKV53691.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
Length = 207
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 126/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKR+ +PN+RVMIHQP+GG GQ D++I
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
AREI+ K +++ TG++ E +++D +RDR++S E+VEYG++D V+ +
Sbjct: 152 HAREIIKTKQMMNELMAKHTGQTIENIERDTNRDRFLSASESVEYGLVDSVLSQ 205
>gi|404419166|ref|ZP_11000927.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403661315|gb|EJZ15831.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 200
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 121/167 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL ERI+FLG+ +DD +A+ + +Q+LLL A+DPTKDI L++NSPGGS+SA MAIYD + L
Sbjct: 18 LLAERIIFLGSQVDDDIANKLCAQILLLSAEDPTKDIHLYINSPGGSISAGMAIYDTMVL 77
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
DV+T A+GM+AS +L GTKGKR A+P+ RV++HQP+GG +G D+ IQA +
Sbjct: 78 APCDVATYAMGMAASMGEFLLAAGTKGKRHALPHARVLMHQPLGGVTGSAADIAIQAEQF 137
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K R+ + FTG+S EQ++ D DRDR+ + EA+EYG +D +I
Sbjct: 138 HVIKKEMFRLNAEFTGKSIEQIEADSDRDRWFTAQEALEYGFVDHII 184
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG A D LLK+RIVFLG+ I+D A +I+Q+L L+A+DP KDI
Sbjct: 1 MSLVPIVVEQTNRGERAYDIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A +AIYD +Q ++ DV T+ +GM+AS A+ +L G KGKRFA+PN+ +
Sbjct: 61 WLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG GQ D++I A ++ +D RI+S TG+ E+++ D++RD +M+ EA
Sbjct: 121 MIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEA 180
Query: 242 VEYGIIDGVIDR 253
YGIID ++ R
Sbjct: 181 KTYGIIDDILVR 192
>gi|386715303|ref|YP_006181626.1| ATP-dependent Clp protease proteolytic subunit [Halobacillus
halophilus DSM 2266]
gi|384074859|emb|CCG46352.1| ATP-dependent Clp protease proteolytic subunit [Halobacillus
halophilus DSM 2266]
Length = 193
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD ++++I++QLL L A DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSPIDDNISNSIVAQLLFLAADDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ MAIYD +Q ++ +VST+ GM+AS + +L G GKR+A+PN+ VMIHQP+GG GQ
Sbjct: 73 SGMAIYDTMQFIKPNVSTICTGMAASMGAFLLNAGEPGKRYALPNSEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ ++ +I+S TG+ +E +++D DRD +MS EAV+YG+ID V+++
Sbjct: 133 ASDIEIHAKRIIKMREKLNKILSERTGQPYEVIERDTDRDNFMSAHEAVDYGLIDKVMEK 192
>gi|195640846|gb|ACG39891.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
gi|413955932|gb|AFW88581.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays]
gi|413955933|gb|AFW88582.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays]
Length = 281
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
L + RI+ G ++D +A+ I++QLL LDA DP KDI ++VNSPGGS++A MAI+D ++
Sbjct: 101 LFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKH 160
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+R DVSTV +G++AS + +L GTKGKR+++PN+R+MIHQP+GGA GQ D+EIQA E+
Sbjct: 161 IRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEM 220
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVP 263
+H+K N ++ TG+ +++ D DRD +MS EA EYG+IDGVI + + L P+P
Sbjct: 221 LHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVI-MNPLKALQPLP 278
>gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens ATCC 13124]
gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens SM101]
gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|422346059|ref|ZP_16426973.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|422874317|ref|ZP_16920802.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
gi|21759067|sp|Q8XKK1.1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123146116|sp|Q0ST53.1|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123148745|sp|Q0TQK2.1|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens ATCC 13124]
gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens SM101]
gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|373226681|gb|EHP49003.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|380304794|gb|EIA17080.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
Length = 194
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 125/174 (71%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+ L ++D A+ +++QLL L+++DP KDI L++NSPGGS+++ MAIY
Sbjct: 20 DIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGMAIY 79
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN +MIHQP+GG GQ D++I
Sbjct: 80 DTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPLGGFQGQATDIDI 139
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+ I+ KD +I+S T + E+++ D++RD +M EAVEYG+ID VI+R
Sbjct: 140 HAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVIER 193
>gi|336430079|ref|ZP_08610035.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336001250|gb|EGN31395.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 200
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 118/167 (70%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG ++D A +++QLL L+A+D KDI L++NSPGGS++A MAIYD +Q
Sbjct: 24 LLKDRIIFLGEEVNDTTASLVVAQLLFLEAEDTEKDIHLYINSPGGSVTAGMAIYDTMQF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
V+ DVST+ +GM+AS + +L GG KGKR A+PN +MIHQP GG GQ ++EI A+ I
Sbjct: 84 VKCDVSTICIGMAASMGAFLLAGGAKGKRMALPNAEIMIHQPSGGTQGQATEIEITAKHI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ +I++ TG+ FE V D +RD + + EA YG+ID VI
Sbjct: 144 LQTKEKLAKILAQNTGQDFEVVMADTERDNWKTAEEAKAYGLIDSVI 190
>gi|229496588|ref|ZP_04390302.1| Clp protease [Porphyromonas endodontalis ATCC 35406]
gi|229316485|gb|EEN82404.1| Clp protease [Porphyromonas endodontalis ATCC 35406]
Length = 228
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 43 RRISTKTLALQQQQRQHDVPLSSAPQTPAT----AMRGAEADAMGLLLKERIVFLGNNID 98
+ +T+ L L H + + +P + A+ D L+ +RI+FLG +D
Sbjct: 8 KHFATRKLGLNSNTLHHYISANGGYVSPTIIEERQLNVAQMDVFSRLMMDRIIFLGAGVD 67
Query: 99 DFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSA 158
D+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + DVST+ GM+A
Sbjct: 68 DYTANVIQAQLLFLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQYISCDVSTICTGMAA 127
Query: 159 STASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGF 218
S A+++L G+ GKRFA+P++RVMIHQP+GG GQ D+EI A+EI+ K +IIS
Sbjct: 128 SMAAVLLVAGSHGKRFALPHSRVMIHQPLGGMQGQASDIEIAAKEILRVKGELYKIISEH 187
Query: 219 TGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+G+ E +++D DRD++M+ EA YG+ID V+
Sbjct: 188 SGQPLEVIERDSDRDKWMTAEEAQAYGMIDKVL 220
>gi|359785395|ref|ZP_09288547.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp.
GFAJ-1]
gi|359297324|gb|EHK61560.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp.
GFAJ-1]
Length = 205
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + +G A D LLKER++FL ++D++A+ +++QLL L++++P KDI L++
Sbjct: 14 PMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHLYI 73
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVSTV +G +AS +L+L G GKR+ +PN+RVMIHQ
Sbjct: 74 NSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQ 133
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI REI+ ++ +I++ TG+ E V D DRD +MS +A EYG
Sbjct: 134 PLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIETVASDTDRDNFMSAHKAKEYG 193
Query: 246 IIDGVIDR 253
+ID V+D+
Sbjct: 194 LIDAVLDK 201
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERIVFLG +D +A+ I++QLL L+A+D KDI L++NSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYLYINSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A M I+D + VR DV T+ +G++AS + +L G KGKR ++P++R+MIHQP+GGA GQ
Sbjct: 71 AGMGIFDTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQAREI+++K ++ TG+ E++++D +RD +MS EA +YG+ID VIDR
Sbjct: 131 ATDIEIQAREILYHKRRLNEFLAEHTGQPIERIEEDTERDFFMSAEEAKDYGLIDQVIDR 190
>gi|428299969|ref|YP_007138275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236513|gb|AFZ02303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 198
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 129/173 (74%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L ERI+FLG +DD +A+ II+++L LD++DP KDI L++NSPGGS+SA +AI+
Sbjct: 22 DIYNRLFLERIIFLGREVDDDIANKIIAEMLYLDSEDPGKDIILYINSPGGSVSAGLAIF 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV+T+ +G++AS S +L GTKGKR A+P++R+MIHQP GG GQ D+EI
Sbjct: 82 DTMQHIKSDVATICVGLAASMGSFLLTAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+AREI+ + I + TG++ ++++KD+DRD +MS EA EYG++D VI+
Sbjct: 142 EAREIIRIRHQLNNIYANTTGQTLQKIEKDMDRDFFMSAAEAKEYGLVDRVIE 194
>gi|363890989|ref|ZP_09318283.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|363893165|ref|ZP_09320304.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|363895295|ref|ZP_09322293.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|402838212|ref|ZP_10886724.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
gi|361957733|gb|EHL11038.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|361961689|gb|EHL14872.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|361962756|gb|EHL15865.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|402273716|gb|EJU22911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
Length = 200
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
++ P RG + D LLK+RI+FLG+ ++D A +++QLL L+++DP KDI
Sbjct: 1 MAYVPVVVEQTSRGERSYDIYSRLLKDRIIFLGDEVNDQTASLVVAQLLFLESEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L GTKGKRFA+PN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTIQYIKPDVSTICIGMAASMGAFLLNCGTKGKRFALPNSEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQ D++I A I+ ++N +I++ TG+ E + +D +RD +MS EA
Sbjct: 121 MIHQPLGGTRGQATDIKIHAERIIKMRENLNQIMAERTGQPIEVINRDTERDFFMSAEEA 180
Query: 242 VEYGIIDGVI 251
+YG+ID VI
Sbjct: 181 KQYGLIDDVI 190
>gi|332305574|ref|YP_004433425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
sp. 4H-3-7+YE-5]
gi|410641918|ref|ZP_11352437.1| ATP-dependent Clp protease, protease subunit [Glaciecola
chathamensis S18K6]
gi|410646705|ref|ZP_11357155.1| ATP-dependent Clp protease, protease subunit [Glaciecola
agarilytica NO2]
gi|332172903|gb|AEE22157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
sp. 4H-3-7+YE-5]
gi|410133877|dbj|GAC05554.1| ATP-dependent Clp protease, protease subunit [Glaciecola
agarilytica NO2]
gi|410138820|dbj|GAC10624.1| ATP-dependent Clp protease, protease subunit [Glaciecola
chathamensis S18K6]
Length = 212
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 126/172 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKE ++F+ ++D +A+ I++Q+L L+A++P KDI L++NSPGGS++A MAIY
Sbjct: 28 DIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DVSTV +G +AS + +L GGTKGKR+ +PN RVMIHQP+GG GQ D EI
Sbjct: 88 DTMNFIKPDVSTVCIGQAASMGAFLLSGGTKGKRYCLPNARVMIHQPLGGFQGQASDFEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K+ R+++ TG+ +E+V +D DRD ++S E+V+YG++D V+
Sbjct: 148 HAKEILSIKEKMNRLMAEHTGQDYEKVARDTDRDNFLSAQESVDYGLVDQVL 199
>gi|419940383|ref|ZP_14457123.1| ATP-dependent Clp protease proteolytic subunit, partial
[Escherichia coli 75]
gi|388403370|gb|EIL63898.1| ATP-dependent Clp protease proteolytic subunit, partial
[Escherichia coli 75]
Length = 168
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 123/164 (75%)
Query: 88 ERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRA 147
ER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++
Sbjct: 1 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 60
Query: 148 DVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHN 207
DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D+EI AREI+
Sbjct: 61 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 120
Query: 208 KDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++
Sbjct: 121 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 164
>gi|50120087|ref|YP_049254.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
gi|60389567|sp|Q6D827.1|CLPP_ERWCT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49610613|emb|CAG74058.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 207
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 134/200 (67%), Gaps = 4/200 (2%)
Query: 53 QQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLL 111
Q++Q H ++ P RG + D LLKERI+FL ++D++A+ +++Q+L
Sbjct: 7 QERQAPH---MALVPMVVEQTARGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLF 63
Query: 112 LDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKG 171
L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S + +L G KG
Sbjct: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKG 123
Query: 172 KRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDID 231
KR +PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ TG+ E +++D +
Sbjct: 124 KRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEAIERDTE 183
Query: 232 RDRYMSPIEAVEYGIIDGVI 251
RDR++S EAVEYG++D V
Sbjct: 184 RDRFLSASEAVEYGLVDSVF 203
>gi|403251889|ref|ZP_10918207.1| protease subunit of ATP-dependent protease [actinobacterium SCGC
AAA027-L06]
gi|402914787|gb|EJX35792.1| protease subunit of ATP-dependent protease [actinobacterium SCGC
AAA027-L06]
Length = 205
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 131/191 (68%)
Query: 61 VPLSSAPQTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKD 120
+ LS+ P+ + G + LLKERI+FLG+ ++D +A+AI +Q+LLL A+DP KD
Sbjct: 1 MELSNTPRAASAGAGGLDDQVYQRLLKERIIFLGSVVEDSMANAICAQMLLLAAEDPEKD 60
Query: 121 IRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTR 180
I L++NSPGGS+SA MAIYD +Q ++ DV+TVA+G++AS +L GT GKR+A+P+ R
Sbjct: 61 IYLYINSPGGSISAGMAIYDTMQYIKNDVATVAMGLAASMGQFLLCSGTAGKRYALPHAR 120
Query: 181 VMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIE 240
+M+HQP GG G D++IQA ++ K N +I+ TG+ E + +D DRDR+ + E
Sbjct: 121 IMMHQPSGGIGGTASDIKIQAEQMSFTKKNMAELIAFHTGQKAETITEDSDRDRWFTAEE 180
Query: 241 AVEYGIIDGVI 251
A EYG +D V+
Sbjct: 181 AKEYGFVDHVV 191
>gi|227504047|ref|ZP_03934096.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
striatum ATCC 6940]
gi|227199377|gb|EEI79425.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
striatum ATCC 6940]
Length = 199
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 121/168 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG +DD +A+ + +Q+LLL A+DPT+DI L++NSPGGS++A MAIYD ++
Sbjct: 24 LLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKY 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T +G++AS +L GGTKGKR+A+P+ R+M+HQP G G D+ IQA +
Sbjct: 84 SPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQAEQF 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
K ++I+ TG+SFEQ+ KD DRDR+ + +A EYGI+D VI+
Sbjct: 144 AQTKREMAQLIAEHTGQSFEQITKDSDRDRWFTAQQAKEYGIVDHVIE 191
>gi|451967071|ref|ZP_21920318.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
gi|451314224|dbj|GAC65680.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
Length = 206
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 133/197 (67%), Gaps = 1/197 (0%)
Query: 56 QRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
QR+ ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+A
Sbjct: 6 QRELAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 65
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S S +L G +GKRF
Sbjct: 66 ENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRF 125
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ +G+ E +++D +RDR
Sbjct: 126 CLPNSRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDR 185
Query: 235 YMSPIEAVEYGIIDGVI 251
+MS EAV+YG++D V+
Sbjct: 186 FMSAQEAVDYGLVDAVL 202
>gi|387894467|ref|YP_006324764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens A506]
gi|423692342|ref|ZP_17666862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens SS101]
gi|213521159|gb|ACJ50516.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens SS101]
gi|387164635|gb|AFJ59834.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens A506]
gi|387998810|gb|EIK60139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens SS101]
Length = 211
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 21 PMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ +VST +G + S + +L G +GKRF +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI+ ++ +++ +GR+ E++++D +RD +MS A EYG
Sbjct: 141 PLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKEYG 200
Query: 246 IIDGVIDR 253
+ID VID+
Sbjct: 201 LIDAVIDK 208
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 124/171 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RIV LG IDD V++AI+SQLL L+++DP KDI L++NSPGGS++A +AIY
Sbjct: 18 DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPGGSVTAGLAIY 77
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V+ VST+ +G +AS +++L G KGKR+++P++R+MIHQP+GG GQ D+EI
Sbjct: 78 DTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGVRGQATDIEI 137
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 250
QA+EI+ + +I TG+ E+V+KD DRD YM E+ YGIID +
Sbjct: 138 QAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIIDEI 188
>gi|77455725|gb|ABA86601.1| chloroplast clp protease P [Isochrysis galbana]
Length = 277
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 129/185 (69%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D M LLK+RI+ LG +DD VA+ +++QLL L +D KDI +++NSPGGS+SA MAI+
Sbjct: 89 DVMSRLLKDRILLLGQGVDDEVANLLVAQLLYLANEDARKDITMYINSPGGSVSAGMAIF 148
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q V D++TV G +AS + +LG G KGKR ++PN+R+MIHQP+GGA GQ D+EI
Sbjct: 149 DTMQYVPCDLNTVCFGTAASMGAFLLGAGQKGKRRSLPNSRIMIHQPLGGAQGQAADIEI 208
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 259
QA+EI+ + I+ +TG+ ++++ D DRD +M+P EA +YGIID V+ IP
Sbjct: 209 QAKEILFIRALLCEYIADYTGQPVDKIEDDCDRDFFMTPEEAKDYGIIDEVLASKVRIPT 268
Query: 260 VPVPE 264
V PE
Sbjct: 269 VARPE 273
>gi|374307960|ref|YP_005054391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|374308266|ref|YP_005054697.1| hypothetical protein [Filifactor alocis ATCC 35896]
gi|320120411|gb|EFE27574.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|320120478|gb|ADW16163.1| hypothetical protein HMPREF0389_01718 [Filifactor alocis ATCC
35896]
Length = 196
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 133/195 (68%), Gaps = 1/195 (0%)
Query: 61 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
+ ++ P + RG + D LLK+RI+FL + ++D + +++Q+L L+A+DP K
Sbjct: 1 MKMAYVPVVVEQSGRGERSYDIYSRLLKDRIIFLSDEVNDVTSSLVVAQMLFLEAEDPDK 60
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI ++NSPGGS+++ MAI+D +Q ++ DV T+ +GM+AS + +L G KGKR+A+PN
Sbjct: 61 DIMFYINSPGGSITSGMAIFDTMQYIKCDVCTICIGMAASMGAFLLAAGEKGKRYALPNA 120
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
VMIHQP+GGA GQ D++IQA I+ KD I++ TG++ E ++ D +RD +MS
Sbjct: 121 EVMIHQPLGGAQGQATDIQIQAERILKMKDKLNIILAERTGQNLETIKNDTERDNFMSAE 180
Query: 240 EAVEYGIIDGVIDRD 254
EA EYG+ID VI+++
Sbjct: 181 EAKEYGLIDKVIEKN 195
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 132/186 (70%), Gaps = 5/186 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG A D LLK RIVFLG I+D VA+ +++QLL L+++DP KDI L++N
Sbjct: 9 QTP----RGERAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYLYIN 64
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGG +SA +AIYD ++ ++ V+TV +G +AS A+++L G KGKR+A+P++RVMIHQP
Sbjct: 65 SPGGEVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMIHQP 124
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GGA G D+EI REI+ K I++ TG+ E++++D DRD +MS EA EYGI
Sbjct: 125 LGGAYGPAADIEIHTREILKIKRVLNEILAHHTGQPIEKIERDTDRDFFMSAYEAKEYGI 184
Query: 247 IDGVID 252
+D V++
Sbjct: 185 VDEVLE 190
>gi|392955511|ref|ZP_10321042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
macauensis ZFHKF-1]
gi|391878438|gb|EIT87027.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
macauensis ZFHKF-1]
Length = 197
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I++QLL L A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ +VST+ +GM+AS + +L G KGKR+A+PN VMIHQP+GG GQ
Sbjct: 73 AGMAIYDTMNFIKPNVSTICIGMAASMGAFLLSAGEKGKRYALPNAEVMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D+EI AR I+ ++ +I++ TG+ E +++D DRD +M +AV+YG++D V+
Sbjct: 133 AADIEIHARRIIQMREQLNKILAENTGQPLEVIERDTDRDNFMLAADAVKYGLVDRVM 190
>gi|153871192|ref|ZP_02000426.1| Peptidase S14, ClpP [Beggiatoa sp. PS]
gi|152072341|gb|EDN69573.1| Peptidase S14, ClpP [Beggiatoa sp. PS]
Length = 228
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 135/202 (66%), Gaps = 1/202 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D+ A+ +++QLL L++++P KDI L++
Sbjct: 24 PMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYTANLVVAQLLFLESENPEKDIHLYI 83
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA +AIYD +Q ++ DVST+ +G +AS +L+L GG KR+ +P++R+MIHQ
Sbjct: 84 NSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLSGGADKKRYCLPHSRIMIHQ 143
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D++I AREI+ ++ I++ +G+ E++QKD +RD +M+ AVEYG
Sbjct: 144 PLGGFQGQATDIDIHAREILKVRERLNEILAKHSGQPLEKIQKDTERDNFMAAETAVEYG 203
Query: 246 IIDGVIDRDSIIPLVPVPEKVK 267
++D V+ + E+ K
Sbjct: 204 LVDAVLSTRHALTAAATEEQTK 225
>gi|410997188|gb|AFV98653.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Sulfuricurvum sp. RIFRC-1]
Length = 198
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+ L ++D VA +I++Q+L L+A+DP KDI
Sbjct: 1 MSYIPYVIEKTGRGERSYDIYSRLLKDRIIMLSGEVNDPVASSIVAQMLFLEAEDPQKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGG +++ MAIYD + +R DVST+ +G +AS + +L G KGKR+A+P+ R+
Sbjct: 61 YFYINSPGGVITSGMAIYDTMNYIRPDVSTICIGQAASMGAFLLSSGAKGKRYALPHARI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GGA GQ D+EIQA+EI+ K I++ G+S ++++KD DRD +MS E
Sbjct: 121 MIHQPLGGAQGQATDIEIQAKEILRMKAELNEILAKNCGQSIKKLEKDTDRDNFMSAAEG 180
Query: 242 VEYGIIDGVI 251
VEYGIID V+
Sbjct: 181 VEYGIIDEVL 190
>gi|329908483|ref|ZP_08274873.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacteraceae
bacterium IMCC9480]
gi|327546710|gb|EGF31661.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacteraceae
bacterium IMCC9480]
Length = 206
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 142/206 (68%), Gaps = 7/206 (3%)
Query: 47 TKTLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAI 105
T+ A++ Q L P + RG + D LLKER++FL ++D VA+ I
Sbjct: 3 TRNFAMEPQM------LGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDGVANLI 56
Query: 106 ISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLIL 165
++QLL L++++P KDI L++NSPGGS+SA MAI+D +Q ++ +VST+ G++AS + +L
Sbjct: 57 VAQLLFLESENPDKDISLYINSPGGSVSAGMAIFDTMQFIKPNVSTLCTGLAASMGAFLL 116
Query: 166 GGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQ 225
G KGKRF++PN+R+MIHQP GGA GQ D+EIQA+EI++ ++ I++ TGR+ E+
Sbjct: 117 AAGAKGKRFSLPNSRIMIHQPSGGAQGQATDIEIQAKEILYLRERLNGILADKTGRTIEE 176
Query: 226 VQKDIDRDRYMSPIEAVEYGIIDGVI 251
+++D +RD +MS EA +YG+ID V+
Sbjct: 177 IRRDTERDNFMSADEAEKYGMIDKVL 202
>gi|255284021|ref|ZP_05348576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bryantella
formatexigens DSM 14469]
gi|255265474|gb|EET58679.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Marvinbryantia formatexigens DSM 14469]
Length = 194
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLK+RI+FLG + D A+ I++QLL L+++DP KDI
Sbjct: 1 MSFVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSANLIVAQLLFLESEDPAKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
+L++NSPGGS+SA AIYD +Q ++ DVST+ +GM+AS + +L GG KGKRFA+PN ++
Sbjct: 61 QLYINSPGGSVSAGWAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGAKGKRFALPNAQI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D++I A EI+ ++ ++ TG+ + ++ D +RD YM+ EA
Sbjct: 121 MIHQPSGGAKGQASDIKIVAEEILKSRKRLNEYLAANTGQPIDVIEADTERDNYMTAEEA 180
Query: 242 VEYGIIDGVI 251
YG+ID VI
Sbjct: 181 KAYGLIDAVI 190
>gi|182417589|ref|ZP_02948911.1| Clp protease [Clostridium butyricum 5521]
gi|237667767|ref|ZP_04527751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182378544|gb|EDT76073.1| Clp protease [Clostridium butyricum 5521]
gi|237656115|gb|EEP53671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 201
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LLKERI+ L ++D A I++QLL LD++DP KDI
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDASAQLIVAQLLFLDSEDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS++A MAIYD +QL+ ADVST+ +GM+AS + +L G KGKR+A+PN +
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMQLINADVSTICVGMAASMGAFLLSCGAKGKRYALPNAEI 120
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP+GG GQV D+EI A ++ K+ + +S TG+ E +Q+D +RD +MS +A
Sbjct: 121 MIHQPLGGFQGQVTDIEIHANRMLKVKEVLNKTLSENTGKPLEVIQRDTERDNFMSAEDA 180
Query: 242 VEYGIIDGVI 251
EYG++D +I
Sbjct: 181 KEYGLVDEII 190
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG A D LL+ERIVFLG + D +++ +++QLL L+A+DP KDI L++
Sbjct: 3 PTVIESSGRGDRAFDIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYLYI 62
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+SA M ++D + VR DV T+ +G++AS + +L G KGKR ++PN+R+MIHQ
Sbjct: 63 NSPGGSVSAGMGMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D+EIQA+EI++ K+ + ++ TG+ +++D +RD +MS EA EYG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYLKNKLNQHLADHTGQPLSTIEEDTERDFFMSSEEAKEYG 182
Query: 246 IIDGVIDR 253
+ID VI R
Sbjct: 183 LIDQVITR 190
>gi|259501068|ref|ZP_05743970.1| ATP-dependent Clp protease [Lactobacillus iners DSM 13335]
gi|302190483|ref|ZP_07266737.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus iners
AB-1]
gi|309803807|ref|ZP_07697892.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 11V1-d]
gi|309804605|ref|ZP_07698670.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 09V1-c]
gi|309805854|ref|ZP_07699889.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 03V1-b]
gi|309808282|ref|ZP_07702189.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 01V1-a]
gi|309809384|ref|ZP_07703246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 2503V10-D]
gi|312870768|ref|ZP_07730874.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 3008A-a]
gi|312873057|ref|ZP_07733116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2062A-h1]
gi|312874331|ref|ZP_07734362.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2052A-d]
gi|312875077|ref|ZP_07735094.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2053A-b]
gi|315653872|ref|ZP_07906788.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus iners
ATCC 55195]
gi|325913268|ref|ZP_08175636.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 60-B]
gi|329920382|ref|ZP_08277114.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 1401G]
gi|349611768|ref|ZP_08890998.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus sp.
7_1_47FAA]
gi|259167762|gb|EEW52257.1| ATP-dependent Clp protease [Lactobacillus iners DSM 13335]
gi|308164041|gb|EFO66303.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 11V1-d]
gi|308165997|gb|EFO68215.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 09V1-c]
gi|308167763|gb|EFO69907.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 03V1-b]
gi|308168485|gb|EFO70596.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 01V1-a]
gi|308170295|gb|EFO72326.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 2503V10-D]
gi|311089367|gb|EFQ47794.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2053A-b]
gi|311090097|gb|EFQ48510.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2052A-d]
gi|311091290|gb|EFQ49675.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2062A-h1]
gi|311093644|gb|EFQ51982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 3008A-a]
gi|315488568|gb|EFU78214.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus iners
ATCC 55195]
gi|325477371|gb|EGC80515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 60-B]
gi|328936058|gb|EGG32511.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 1401G]
gi|348608233|gb|EGY58218.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus sp.
7_1_47FAA]
Length = 194
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+R++ L I+D +A++II+QLL LDAQD TKDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRVIMLSGEINDTMANSIIAQLLFLDAQDNTKDISLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQP+GGA GQ
Sbjct: 72 SGLAIMDTMNFIKSDVSTIAIGMAASMASILLTAGTKGKRFALPNSTVLIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D++I A EI+ +++ I+ TG+ E++Q D +RD+Y++ EA +YG+ID ++
Sbjct: 132 QTDIQIAANEILKSREKINSILHETTGQPLEKIQADTERDKYLTAQEAKDYGLIDEIL 189
>gi|451822957|ref|YP_007459231.1| ATP-dependent Clp, protease subunit [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775757|gb|AGF46798.1| ATP-dependent Clp, protease subunit [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 215
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P ++ RG A D LLKERI+FL IDD +A+ +++Q+L L+++DP KDI +++
Sbjct: 27 PMVVESSGRGERAYDIYSRLLKERIIFLVGPIDDNIANLVVAQMLFLESEDPNKDINIYI 86
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS+ A MAI+D + V+ DVST+ +G++AS + +L G KGKRF++PN+ +MIHQ
Sbjct: 87 NSPGGSIYAGMAIFDTMMFVKPDVSTICIGLAASMGAFLLSAGKKGKRFSLPNSSIMIHQ 146
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P GGA+GQ D++I A+EI+ K+ I+S TG+S E++ +D DRD +MS EA+ YG
Sbjct: 147 PSGGANGQATDIQIHAKEILRLKNRLNFIMSENTGKSIEEISEDTDRDNFMSAEEALSYG 206
Query: 246 IIDGVI 251
+ID V+
Sbjct: 207 LIDMVV 212
>gi|390949050|ref|YP_006412809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiocystis
violascens DSM 198]
gi|390425619|gb|AFL72684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiocystis
violascens DSM 198]
Length = 214
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 132/180 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER++FL ++D +++ +++QLL L++++P KDI L++NSPGGS++A +AIY
Sbjct: 33 DIYSRLLKERVIFLVGQVEDHMSNLVVAQLLFLESENPDKDIHLYINSPGGSVTAGLAIY 92
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ VR DVST+ +G +AS +L+L GG KGKR+ +P++R+MIHQP+GG GQ D++I
Sbjct: 93 DTMRFVRPDVSTMCIGQAASMGALLLAGGAKGKRYCLPHSRMMIHQPLGGFQGQATDIDI 152
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 259
AREI++ +D +I+S TG+ E++ +D +RDR+MS A EYG+ID VI+ P+
Sbjct: 153 HAREILYIRDKLNQILSEHTGQPIEKIAEDTERDRFMSGEVAQEYGLIDKVINERGPAPV 212
>gi|119713091|gb|ABL97160.1| ATP-dependent Clp protease proteolytic subunit [uncultured marine
bacterium EB0_49D07]
Length = 204
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 135/187 (72%), Gaps = 5/187 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG A D LLKERI+FL IDD++++ +++QLL L++++P KDI +++N
Sbjct: 15 QTP----RGERAFDIYSRLLKERIIFLTGPIDDYISNLVVAQLLFLESENPEKDISIYIN 70
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGG +++ +AIYD +Q + +VST+ +G +AS SL+L GG +GKRFA+ N+R+MIHQP
Sbjct: 71 SPGGVITSGLAIYDTMQFIAPEVSTLCIGQAASMGSLLLAGGAEGKRFALTNSRIMIHQP 130
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
+GG SGQ D EI A+E++ K I+S TG++ ++V++D DRD +++ EAV YGI
Sbjct: 131 LGGFSGQASDFEIHAKEMLLVKQKVNEILSKHTGKTLKKVEQDTDRDNFLNATEAVTYGI 190
Query: 247 IDGVIDR 253
ID ++++
Sbjct: 191 IDEILEK 197
>gi|399155154|ref|ZP_10755221.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium SCGC AAA007-O20]
Length = 198
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 127/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKER+VF+ ++D+ A+ +++QLL L++++P KDI L++NSPGGS++A +AIY
Sbjct: 24 DIYSRLLKERVVFMVGPVEDYTANVVVAQLLFLESENPDKDIHLYINSPGGSVTAGLAIY 83
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ D+ST+ +G ++S +L+L G KGKRFA+P+ R MIHQP+GG SGQ D++I
Sbjct: 84 DTMQFIKPDISTLCIGQASSMGALLLTAGAKGKRFALPHARCMIHQPLGGFSGQASDIDI 143
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
A+EI+ +D I+ TG+S + +QKD DRD +MS E+ +YG+ID V+ +
Sbjct: 144 HAQEILKTRDKLNSILKEHTGQSMKTIQKDTDRDNFMSASESAKYGLIDKVLTK 197
>gi|71281884|ref|YP_270452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
gi|110816457|sp|Q47XL8.1|CLPP_COLP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71147624|gb|AAZ28097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
Length = 220
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 126/169 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKER++FL ++D +A+ II+QLL L+++ P KDI L++NSPGGS++A MAIYD ++
Sbjct: 48 LLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMKF 107
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ ++STV +G +AS + +L GG KGKR+ +PN RVMIHQP+GG GQ D EI A+EI
Sbjct: 108 IKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEI 167
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ KD ++++ TG++ ++V +D DRD ++S AVEYG++D ++++
Sbjct: 168 LFIKDKLNKLMAEHTGQTLDKVSQDTDRDNFLSAEAAVEYGLVDSILEQ 216
>gi|332141945|ref|YP_004427683.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862350|ref|YP_006977584.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii AltDE1]
gi|327551967|gb|AEA98685.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819612|gb|AFV86229.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii AltDE1]
Length = 209
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKE ++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGGS++A MAIY
Sbjct: 28 DIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D ++ ++ DVSTV +G +AS + +L G KGKR+ +PN+RVMIHQP+GG GQ D EI
Sbjct: 88 DTMRFIKPDVSTVCMGQAASMGAFLLSAGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K+ R+++ TG+ +E+V +D DRD ++S EA EYG++D V+
Sbjct: 148 HAKEILSIKEKLNRLLADHTGQDYEKVARDTDRDNFLSATEAKEYGLVDQVL 199
>gi|406597483|ref|YP_006748613.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
gi|407684497|ref|YP_006799671.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'English Channel 673']
gi|407688425|ref|YP_006803598.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|407700789|ref|YP_006825576.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Black Sea 11']
gi|406374804|gb|AFS38059.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
gi|407246108|gb|AFT75294.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'English Channel 673']
gi|407249936|gb|AFT79121.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Black Sea 11']
gi|407291805|gb|AFT96117.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 209
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 124/167 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKE ++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGGS++A MAIYD ++
Sbjct: 33 LLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMKF 92
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVSTV +G +AS + +L G KGKR+ +PN+RVMIHQP+GG GQ D EI A+EI
Sbjct: 93 IKPDVSTVCMGQAASMGAFLLSAGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEI 152
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K+ R+++ TG+ +E+V +D DRD ++S EA EYG++D V+
Sbjct: 153 LSIKEKLNRLMADHTGQDYEKVARDTDRDNFLSATEAKEYGLVDQVL 199
>gi|199597270|ref|ZP_03210701.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus HN001]
gi|229551778|ref|ZP_04440503.1| endopeptidase Clp [Lactobacillus rhamnosus LMS2-1]
gi|258507926|ref|YP_003170677.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus GG]
gi|258539175|ref|YP_003173674.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus Lc 705]
gi|366086438|ref|ZP_09452923.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus zeae
KCTC 3804]
gi|385827608|ref|YP_005865380.1| Clp protease proteolytic subunit [Lactobacillus rhamnosus GG]
gi|385834837|ref|YP_005872611.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
rhamnosus ATCC 8530]
gi|417067952|ref|ZP_11949958.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus MTCC 5462]
gi|418070219|ref|ZP_12707494.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus R0011]
gi|421769376|ref|ZP_16206083.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus LRHMDP2]
gi|421772341|ref|ZP_16208997.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus LRHMDP3]
gi|423079032|ref|ZP_17067707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus rhamnosus ATCC 21052]
gi|199591786|gb|EDY99861.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus HN001]
gi|229314832|gb|EEN80805.1| endopeptidase Clp [Lactobacillus rhamnosus LMS2-1]
gi|257147853|emb|CAR86826.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus GG]
gi|257150851|emb|CAR89823.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus Lc 705]
gi|259649253|dbj|BAI41415.1| Clp protease proteolytic subunit [Lactobacillus rhamnosus GG]
gi|328465358|gb|EGF36608.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus MTCC 5462]
gi|355394328|gb|AER63758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
rhamnosus ATCC 8530]
gi|357539639|gb|EHJ23656.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus R0011]
gi|357548230|gb|EHJ30097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus rhamnosus ATCC 21052]
gi|411183909|gb|EKS51044.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus LRHMDP3]
gi|411184507|gb|EKS51639.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus LRHMDP2]
Length = 196
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L ++D +A+++I+QLL LDAQD KDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +A+ D + +++DV T+A+GM+AS AS++L GGTKGKRFA+PN+ ++IHQP GGA GQ
Sbjct: 72 SGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A EI+ + +I++ TG++ EQ++KD +RD YMS EA +YG+ID ++
Sbjct: 132 QTEIEIAAEEILKTRKKMNQILADATGQTVEQIKKDTERDHYMSAQEAKDYGLIDDIL 189
>gi|194337396|ref|YP_002019190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309873|gb|ACF44573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
Length = 225
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 139/203 (68%), Gaps = 7/203 (3%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P T+ RG A D LL+ERI+FLG+ ID+ VA I++QL+ L+++DP +DI
Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIY 86
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
++VNSPGGS+SA + IYD +Q +R +VSTV +GM+AS + +L G KGKR ++P++R+M
Sbjct: 87 IYVNSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIM 146
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP GGA GQ D+ IQAREI + +++ TG+ +Q+++D +RDR+M+ EA+
Sbjct: 147 IHQPSGGAQGQESDIVIQAREIEKIRTLLEELLAKHTGKDVKQIREDSERDRWMNAPEAL 206
Query: 243 EYGIIDGVIDRDSIIPLVPVPEK 265
+YGIID + ++ P PEK
Sbjct: 207 DYGIIDAIFEKR------PAPEK 223
>gi|357007886|ref|ZP_09072885.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus elgii
B69]
Length = 194
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL++RIVFL + D A+AII+QLL LDA DP K+I+L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLQDRIVFLTGPVTDEAANAIIAQLLFLDAADPDKEIKLYINSPGGSIA 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A +AIYD ++ V+ +VST+ +G++AS + +L GGTKGKR+A+PN+ VMIHQP+GGA GQ
Sbjct: 73 AGLAIYDAIRHVKPNVSTLCIGLAASMGAFLLSGGTKGKRYALPNSEVMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
DVEI AR I+ +D +++ TG+ + V++D DRD +M+ +A+ YGIID ++ R
Sbjct: 133 ASDVEIGARRILKLRDKLNGLLAAHTGQPLDTVERDTDRDYFMNAQDALAYGIIDEILYR 192
Query: 254 D 254
D
Sbjct: 193 D 193
>gi|398817357|ref|ZP_10575983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398030411|gb|EJL23825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 193
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 126/169 (74%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RI+FLG+ IDD VA+A+++QLL L A+DP KDI L++NSPGGS++A MAI D +
Sbjct: 24 LLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGSVTAGMAIIDTMSF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+ DVST+ GM+AS +++L G GKR+A+PN VM+HQP GG+ GQ D++I A I
Sbjct: 84 IAPDVSTICTGMAASMGAMLLVAGAPGKRYALPNAEVMLHQPWGGSQGQASDIKIAADRI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
M +++ II+ TG++ EQ++KD DRD +++ EA+EYG+ID VI++
Sbjct: 144 MRHRNMLYTIIAERTGKTVEQIEKDADRDYFLTAAEALEYGLIDKVIEK 192
>gi|328956747|ref|YP_004374133.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
17-4]
gi|328673071|gb|AEB29117.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
17-4]
Length = 197
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLK+RI+ L +DD +A+A+I+QLL LDAQD KDI +++
Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGPVDDDLANAVIAQLLFLDAQDSEKDIYIYI 64
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A +AI+D + ++ADV T+A+GM+AS S +L GTKGKR+A+PN +MIHQ
Sbjct: 65 NSPGGSVTAGLAIFDTMNFIKADVQTIAMGMAASMGSFLLTAGTKGKRYALPNAEIMIHQ 124
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P GG+ GQ ++EI AR I++ ++ +I+S TG+ E +++D DRD YMS +A YG
Sbjct: 125 PSGGSQGQATEIEIAARHILNTRERLNKILSDRTGQPIEVIKRDTDRDNYMSAEDAKAYG 184
Query: 246 IIDGVIDRDS 255
+ID +++ S
Sbjct: 185 LIDEIMENSS 194
>gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
Length = 194
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 125/169 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLK+RIV L IDD VA +I++QLL L+A+DP KDI L++NSPGG +++ +IYD +
Sbjct: 23 LLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIYLYINSPGGVVTSGFSIYDTMNY 82
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L G KGKR+A+PN+R+MIHQP+GGA GQ D+EIQA+EI
Sbjct: 83 IKPDVSTICIGQAASMGAFLLSCGAKGKRYALPNSRIMIHQPLGGAQGQATDIEIQAKEI 142
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
+ K+ I+S +G+ QV+KD DRD +MS +AV+YG+ID V+ +
Sbjct: 143 LRMKEILNGILSQNSGKDLAQVEKDTDRDFFMSAEDAVQYGLIDQVLQK 191
>gi|407793809|ref|ZP_11140840.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina
xiamenensis 10-D-4]
gi|407213963|gb|EKE83814.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina
xiamenensis 10-D-4]
Length = 206
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 133/192 (69%), Gaps = 2/192 (1%)
Query: 62 PLSS-APQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTK 119
PL+ P RG + D LLKER++F I+D +A+ I++QLL L++ +P K
Sbjct: 8 PLAQLVPMVVEQTSRGERSYDIYSRLLKERVIFCCGQIEDHMANLIVAQLLFLESDNPDK 67
Query: 120 DIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNT 179
DI L++NSPGG ++A MAIYD ++ ++ DVSTV +G +AS + +L GG KGKR+ +PN+
Sbjct: 68 DIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLAGGAKGKRYCLPNS 127
Query: 180 RVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPI 239
RVMIHQP+GG GQ D EI A++I++ KD R+++ TG+ ++ + KD DRD +MS
Sbjct: 128 RVMIHQPLGGFQGQASDFEIHAKQILYLKDKLNRMLADNTGKDYDVIAKDTDRDNFMSAE 187
Query: 240 EAVEYGIIDGVI 251
++V+YG++DG++
Sbjct: 188 QSVDYGLVDGIL 199
>gi|302878843|ref|YP_003847407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
gi|302581632|gb|ADL55643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
Length = 202
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T+ RG A D LLKER+VFL ++D A+ I++Q+L L++++P KDI ++
Sbjct: 13 PMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDHSANLIVAQMLFLESENPDKDIHFYI 72
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A MAIYD +Q ++ VST+ +G +AS + +L G KGKRFA+PN+RVMIHQ
Sbjct: 73 NSPGGSVTAGMAIYDTMQFIKPAVSTLCIGQAASMGAFLLTAGEKGKRFALPNSRVMIHQ 132
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI AREI++ K ++++ TG++ E +++D DRD ++S +AV YG
Sbjct: 133 PLGGFRGQASDIEIHAREILYLKQKLNQMLADHTGQTVEAIERDTDRDNFLSAADAVAYG 192
Query: 246 IIDGVIDR 253
++D V+++
Sbjct: 193 LVDQVLEK 200
>gi|188534634|ref|YP_001908431.1| ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 207
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKERI+FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IY
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIY 91
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q ++ DVST+ +G + S + +L G KGKR+ +PN+RVMIHQP+GG GQ D++I
Sbjct: 92 DTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDI 151
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
AREI+ K +++ TG++ E +++D +RDR++S E+VEYG++D V+
Sbjct: 152 HAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRFLSASESVEYGLVDSVL 203
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 123/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++QLL L+A+DP KDI L++NSPGG ++A +AIYD +
Sbjct: 24 LLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNF 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DV+T+ G +AS + +L G KGKRFA+P+ R+MIHQP+GGA GQ D++IQA EI
Sbjct: 84 IKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGARGQATDIQIQAEEI 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ K TR ++ +G+S+E+V D +RD +MS EA EYG+ID V+
Sbjct: 144 LRLKATLTRRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLIDKVL 190
>gi|300780629|ref|ZP_07090484.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
gi|300533615|gb|EFK54675.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
Length = 193
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 125/183 (68%), Gaps = 1/183 (0%)
Query: 69 TPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSP 128
TPAT M ++ LL+ERI+FLG +DD +A+ + +Q+LLL A+DP +DI L++NSP
Sbjct: 3 TPATGMNLGDS-VYERLLRERIIFLGQQVDDEIANKLCAQILLLSAEDPNRDISLYINSP 61
Query: 129 GGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMG 188
GGS++A MAIYD ++ D++T +G++AS +L GGTKGKRFA+P+ R+M+HQP
Sbjct: 62 GGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSA 121
Query: 189 GASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIID 248
G G D+ IQA + K +I+ TG+SFEQ+ KD DRDR+ + EA +YGI+D
Sbjct: 122 GVGGTAADIAIQAEQFAQTKKEMAELIAEHTGQSFEQITKDSDRDRWFTAQEAKDYGIVD 181
Query: 249 GVI 251
VI
Sbjct: 182 HVI 184
>gi|254448838|ref|ZP_05062294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC5015]
gi|198261528|gb|EDY85817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC5015]
Length = 236
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
Query: 49 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIIS 107
++ + +++ + P + RG A D LLKER++F+ +++ +A+ I++
Sbjct: 30 SIGVAMNHTDNNIQANLVPMVVEQSARGERAFDIYSRLLKERVIFMVGQVEEHMANLIVA 89
Query: 108 QLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGG 167
QLL L+A +P KDI L++NSPGGS++A MAIYD ++ ++ DVST+ +G +AS + +L G
Sbjct: 90 QLLFLEADNPDKDISLYINSPGGSVTAGMAIYDTMRFIKPDVSTLCIGQAASMGAFLLSG 149
Query: 168 GTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQ 227
G KGKRFA+PN+ VMIHQP+GG GQ D++I AR I+ K+ R+++ TG+ FE+V
Sbjct: 150 GAKGKRFALPNSSVMIHQPLGGFQGQATDIDIHARNILKTKEKLNRMLADHTGQPFERVV 209
Query: 228 KDIDRDRYMSPIEAVEYGIIDGVI 251
+D +RD +M EA EYG+ID V+
Sbjct: 210 EDTERDNFMGADEAKEYGLIDDVL 233
>gi|238023189|ref|ZP_04603615.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
gi|237865572|gb|EEP66712.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
Length = 206
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 130/180 (72%), Gaps = 3/180 (1%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLKERI+FL ++D A+ +++QLL L++++P KDI ++NSPGGS++
Sbjct: 20 RGERAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESENPDKDIYFYINSPGGSVT 79
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPM--GGAS 191
A M+IYD ++ ++ DV T+ LG +AS + +L GTKGKRFA+PN+RVMIHQP+ GG
Sbjct: 80 AGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVMIHQPLISGGLG 139
Query: 192 GQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
GQ D+EI ARE++ K+ ++++ TG+S EQ+++D DRD +MS EA +YG+ID VI
Sbjct: 140 GQASDIEIHARELLKLKEKLNQMLAEHTGKSLEQIERDTDRDNFMSAQEAADYGLIDKVI 199
>gi|452953860|gb|EME59270.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus ruber
BKS 20-38]
Length = 208
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 130/197 (65%), Gaps = 10/197 (5%)
Query: 67 PQTPATAMRGAEADAM-GL---------LLKERIVFLGNNIDDFVADAIISQLLLLDAQD 116
PQ PAT++ A GL LL+ERI+FLG +DD +A+ + +Q+LLL A+D
Sbjct: 3 PQNPATSIGPTMTSATAGLNLSDSVYERLLRERIIFLGTQVDDDIANKLCAQILLLSAED 62
Query: 117 PTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAM 176
PT+DI L++NSPGGS++A MAIYD ++ V DV+T A+G++AS +L GT+GKR+A+
Sbjct: 63 PTRDISLYINSPGGSVTAGMAIYDTMKFVECDVATFAMGLAASMGQFLLSAGTRGKRYAL 122
Query: 177 PNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYM 236
P+ R+M+HQP G G D+ I A + H K +I+ TG++ EQ+ KD DRDR+
Sbjct: 123 PHARIMMHQPSAGIGGTASDIAIMAEQFAHTKREMAELIAEHTGQTVEQITKDSDRDRWF 182
Query: 237 SPIEAVEYGIIDGVIDR 253
+ EA+EYG +D V+ R
Sbjct: 183 TAKEALEYGFVDHVVSR 199
>gi|66044992|ref|YP_234833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae B728a]
gi|71733685|ref|YP_273935.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|237803596|ref|ZP_04591181.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483815|ref|ZP_05637856.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627504|ref|ZP_06460458.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649945|ref|ZP_06481288.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679415|ref|ZP_06500305.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae FF5]
gi|301384120|ref|ZP_07232538.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato Max13]
gi|302059517|ref|ZP_07251058.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato K40]
gi|302135032|ref|ZP_07261022.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|302187983|ref|ZP_07264656.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae 642]
gi|410092110|ref|ZP_11288650.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
viridiflava UASWS0038]
gi|416015383|ref|ZP_11562996.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028212|ref|ZP_11571268.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406896|ref|ZP_16483913.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583545|ref|ZP_16658668.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591339|ref|ZP_16665984.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595334|ref|ZP_16669622.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606345|ref|ZP_16678355.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|422617411|ref|ZP_16686114.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072]
gi|422630346|ref|ZP_16695544.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422640406|ref|ZP_16703833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|422645838|ref|ZP_16708973.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650231|ref|ZP_16713037.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422660628|ref|ZP_16723036.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|422674865|ref|ZP_16734215.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273]
gi|422683344|ref|ZP_16741605.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|440721402|ref|ZP_20901801.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34876]
gi|440724449|ref|ZP_20904731.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34881]
gi|440746734|ref|ZP_20926014.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP39023]
gi|38257468|sp|Q87YR6.2|CLPP_PSESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81308384|sp|Q4ZVM7.1|CLPP_PSEU2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816461|sp|Q48KZ0.1|CLPP_PSE14 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|63255699|gb|AAY36795.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
syringae pv. syringae B728a]
gi|71554238|gb|AAZ33449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298159270|gb|EFI00328.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325361|gb|EFW81428.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327654|gb|EFW83662.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868375|gb|EGH03084.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878772|gb|EGH12921.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882125|gb|EGH16274.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889997|gb|EGH22658.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|330897794|gb|EGH29213.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072]
gi|330939706|gb|EGH43001.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330952797|gb|EGH53057.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|330959387|gb|EGH59647.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963320|gb|EGH63580.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330972589|gb|EGH72655.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273]
gi|330985639|gb|EGH83742.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012679|gb|EGH92735.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331019229|gb|EGH99285.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331025578|gb|EGI05634.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|409760538|gb|EKN45671.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
viridiflava UASWS0038]
gi|440363823|gb|ELQ00982.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34876]
gi|440370093|gb|ELQ07039.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34881]
gi|440370994|gb|ELQ07859.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP39023]
Length = 213
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++F+ ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVST+ +G + S + +L GG +GKR +PN+R+MIHQ
Sbjct: 81 NSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D++I A+EI+H + +++ TG+S E +++D +RD +MS A EYG
Sbjct: 141 PLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAEYG 200
Query: 246 IIDGVIDR 253
+ID VI++
Sbjct: 201 LIDSVINK 208
>gi|389774765|ref|ZP_10192884.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
gi|388438364|gb|EIL95119.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
Length = 209
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L+ P RG + D LLKER++FL ++D VA+ I++Q+L L++++P KDI
Sbjct: 9 LNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENPDKDI 68
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGG+++A +AIYD +Q ++ +VST+ +G + S S +L G KGKRFA+PN+R+
Sbjct: 69 NFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRI 128
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GGA GQ D+EIQAREI++ ++ ++ TG+ E+++ D++RDR+M+ ++A
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYIRERLNKLYVEHTGQPLEKIELDMERDRFMNAVDA 188
Query: 242 VEYGIIDGVIDR 253
YG+ID V+D+
Sbjct: 189 KAYGLIDEVLDK 200
>gi|329121861|ref|ZP_08250476.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
gi|327467799|gb|EGF13291.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
Length = 205
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 128/177 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+FL I+D +A+ II+QLL L+A+DP KDI L++NSPGG ++A MAIY
Sbjct: 25 DIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIY 84
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +R DVST+ +G AS A+++L G KGKRFA+P++ VMIHQP+GG GQ ++EI
Sbjct: 85 DTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMIHQPLGGVQGQATEIEI 144
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 256
AREI+ +D I++ TG+ + ++KD +RD +M+ A++YG+ID ++ R+ +
Sbjct: 145 HAREILRLRDELNGILAKHTGQPLDVIKKDTERDNFMTAENALKYGLIDKILTRNEL 201
>gi|410612507|ref|ZP_11323584.1| ATP-dependent Clp protease, protease subunit [Glaciecola
psychrophila 170]
gi|410167848|dbj|GAC37473.1| ATP-dependent Clp protease, protease subunit [Glaciecola
psychrophila 170]
Length = 214
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKE ++FL ++D +A+ I++QLL L+A++P KDI L++NSPGGS++A MAIY
Sbjct: 28 DIYSRLLKENVIFLVGQVEDHMANLIVAQLLFLEAENPEKDIFLYINSPGGSVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ +VSTV +G +AS + +L G KGKR+ +PN+RVMIHQP+GG GQ D EI
Sbjct: 88 DTMNFIKPNVSTVCIGQAASMGAFLLSAGEKGKRYCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K+ R+++ TG+ +E+V +D DRD ++S +AVEYG+ID V+
Sbjct: 148 HAKEILSIKEKMNRLMAKHTGQEYEKVAQDTDRDNFLSATDAVEYGLIDQVL 199
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+FLG+ I++ +A+ +++Q+L L+++DP KDI L++NSPGGS++
Sbjct: 14 RGERAYDIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPDKDINLYINSPGGSVT 73
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A + IYD +Q ++ VST+ +G +AS A+++L G KGKR A+PN+RVM+HQP+GG GQ
Sbjct: 74 AGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGKRIALPNSRVMLHQPLGGVQGQ 133
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+EI +D II+ T + E+V KD DRD +MS EA+ YGI+D VI++
Sbjct: 134 ATDIEIHAKEIKKIRDRLNEIIAYHTNQDIEKVAKDTDRDFFMSAEEALAYGIVDKVIEK 193
>gi|28870881|ref|NP_793500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968834|ref|ZP_03396975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|424066809|ref|ZP_17804271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071462|ref|ZP_17808887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|443644728|ref|ZP_21128578.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas
syringae pv. syringae B64]
gi|28854130|gb|AAO57195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926437|gb|EEB59991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|407998842|gb|EKG39240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001926|gb|EKG42201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|443284745|gb|ELS43750.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas
syringae pv. syringae B64]
Length = 216
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++F+ ++D++A+ I +QLL L+A++P KDI L++
Sbjct: 24 PMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIHLYI 83
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVST+ +G + S + +L GG +GKR +PN+R+MIHQ
Sbjct: 84 NSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMMIHQ 143
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D++I A+EI+H + +++ TG+S E +++D +RD +MS A EYG
Sbjct: 144 PLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAEYG 203
Query: 246 IIDGVIDR 253
+ID VI++
Sbjct: 204 LIDSVINK 211
>gi|359447956|ref|ZP_09237512.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
gi|392538775|ref|ZP_10285912.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
marina mano4]
gi|358046180|dbj|GAA73761.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
Length = 205
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++Q+L L++++P KDI L++NSPGGS++A MAIYD +
Sbjct: 33 LLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGMAIYDTMNF 92
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L G KGKRF +PN+RVMIHQP+GG GQ D EI A+EI
Sbjct: 93 IKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEI 152
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRD 254
+ KD R+++ TG+ + + KD DRD +MS EAVEYG++D V +RD
Sbjct: 153 LSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASEAVEYGLVDSVFANRD 203
>gi|421521992|ref|ZP_15968641.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
gi|402754253|gb|EJX14738.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
Length = 213
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 129/188 (68%), Gaps = 1/188 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P + RG A D LLKER++FL ++D++A+ +++QLL L+A++P KDI L++
Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYI 80
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGGS++A M+IYD +Q ++ DVST+ +G + S + +L G KGKR +PN+RVMIHQ
Sbjct: 81 NSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQ 140
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GG GQ D+EI A+EI++ K +++ TG+ E +++D +RD +MS A EYG
Sbjct: 141 PLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDTERDNFMSASRAAEYG 200
Query: 246 IIDGVIDR 253
+ID V D+
Sbjct: 201 LIDSVYDK 208
>gi|395239449|ref|ZP_10417328.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394476356|emb|CCI87305.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 194
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQP+GGA GQ
Sbjct: 72 SGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D++I A EI+ ++ +I+ TG+ E++ KD +RD YM+ +A EYG+ID ++
Sbjct: 132 QTDIQIAAEEILKSRKKLNQILHETTGQPIEKILKDTERDNYMTAEQAKEYGLIDEIM 189
>gi|379059080|ref|ZP_09849606.1| ATP-dependent Clp protease proteolytic subunit ClpP [Serinicoccus
profundi MCCC 1A05965]
Length = 202
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FLG+++ D A+AI +QLLLL A+DP KDI L++NSPGGS++A MAI+D +Q
Sbjct: 24 LLKERIIFLGSDVRDDNANAICAQLLLLAAEDPEKDIWLYINSPGGSVTAGMAIFDTMQW 83
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
+ DV+TVA+G++AS +L G GKR+A P+ RVM+HQP GG G D++IQA ++
Sbjct: 84 IPNDVATVAMGLAASMGQFLLSAGEPGKRYATPHARVMMHQPSGGIGGTASDIKIQAEQM 143
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPV 262
+H K +I+ TG+S EQ+ +D DRDR+ + EA EYG +D V +R P P
Sbjct: 144 LHIKKQMAELIAEHTGQSVEQITRDSDRDRWFTAAEAKEYGFVDHVYERSDDAPSSPT 201
>gi|325911461|ref|ZP_08173873.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 143-D]
gi|325476811|gb|EGC79965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 143-D]
Length = 194
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+R++ L I+D +A++II+QLL LDAQD TKDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRVIMLSGEINDTMANSIIAQLLFLDAQDNTKDISLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +AI D + +++DVST+A+GM+AS AS++L GTKGKRFA+PN+ V+IHQP+GGA GQ
Sbjct: 72 SGLAIMDTMNFIKSDVSTIAIGMAASMASILLTAGTKGKRFALPNSTVLIHQPLGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
D++I A EI+ +++ I+ TG+ E++Q D +RD+Y++ EA YG+ID ++
Sbjct: 132 QTDIQIAANEILKSREKINSILHETTGQPLEKIQADTERDKYLTAQEAKNYGLIDEIL 189
>gi|295425564|ref|ZP_06818253.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylolyticus DSM 11664]
gi|295064740|gb|EFG55659.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylolyticus DSM 11664]
Length = 195
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 133/186 (71%), Gaps = 1/186 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P RG A D LLK+RI+ L I+D +A++II+QLL LDAQD TKDI L++
Sbjct: 4 PTVIEQTARGERAYDIYSRLLKDRIIMLHGEINDQMANSIIAQLLFLDAQDNTKDISLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +++ +AI D + +++DVST+A+G++AS AS++L GTKGKRFA+PN+ V+IHQ
Sbjct: 64 NSPGGVITSGLAIMDTMNFIKSDVSTIAIGLAASMASILLTSGTKGKRFALPNSTVLIHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P+GGA GQ D++I A EI+ ++ +I+ TG+ +++QKD +RD Y++ EA EYG
Sbjct: 124 PLGGAQGQQTDIQIAANEILKSRKKINKILHETTGQPLDKIQKDTERDNYLTAEEAKEYG 183
Query: 246 IIDGVI 251
+ID ++
Sbjct: 184 LIDEIM 189
>gi|172041060|ref|YP_001800774.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
urealyticum DSM 7109]
gi|448824027|ref|YP_007417195.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
urealyticum DSM 7111]
gi|171852364|emb|CAQ05340.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
urealyticum DSM 7109]
gi|448277524|gb|AGE36948.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
urealyticum DSM 7111]
Length = 198
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 119/167 (71%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL+ERI+FLG+ +DD +A+ + +Q+LLL A+DP KDI L++NSPGGS++A MAI+D +Q
Sbjct: 26 LLRERIIFLGSQVDDEIANKLCAQILLLAAEDPEKDISLYINSPGGSVTAGMAIFDTMQY 85
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T +G++AS +L GTKGKR+A+P+ R+M+HQP G G D+ IQA +
Sbjct: 86 APCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQAEQF 145
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
H K +I+GFTG++ EQ+ KD DRDR+ + +A EYG +D VI
Sbjct: 146 AHTKREMAELIAGFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDHVI 192
>gi|94264491|ref|ZP_01288278.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|94266601|ref|ZP_01290283.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93452772|gb|EAT03310.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93455050|gb|EAT05277.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
Length = 200
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 131/185 (70%), Gaps = 5/185 (2%)
Query: 68 QTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 126
QTP RG + D LLKERI+FLG ++D VA+ +I+Q+L L+A DP KDI ++N
Sbjct: 10 QTP----RGERSYDIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDITFYIN 65
Query: 127 SPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP 186
SPGGS++A +AIYD ++ V+ D++T+ LG +AS +++L GTKGKR+A+PN R++IHQP
Sbjct: 66 SPGGSVTAGLAIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARILIHQP 125
Query: 187 MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGI 246
MGG GQ D++I AREI+ + ++++ TG+ +++Q D +RD +MS EA YG+
Sbjct: 126 MGGFQGQASDIDIHAREILRMRQGLNKMLADHTGQKLKKIQTDTERDYFMSSEEAKTYGL 185
Query: 247 IDGVI 251
ID V+
Sbjct: 186 IDKVL 190
>gi|261415786|ref|YP_003249469.1| endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790679|ref|YP_005821802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372242|gb|ACX74987.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326653|gb|ADL25854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 196
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 67 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFV 125
P T RG A D LLKERI+FLG I+D VA+ +++QL+ L+ ++P KDI L++
Sbjct: 4 PTVIETTGRGERAYDIYSRLLKERIIFLGTPINDEVANNVMAQLIFLEYENPEKDITLYI 63
Query: 126 NSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQ 185
NSPGG +SA +AIYD +Q VR +++T+ +G AS A+++L GTKGKR+A+P++R+M+HQ
Sbjct: 64 NSPGGYVSAGLAIYDTMQHVRPNIATICIGSCASMAAVLLAAGTKGKRYALPHSRIMLHQ 123
Query: 186 PMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYG 245
P G A+GQ D++I A+EI+ KD T I++ TG+ ++V++ DRD YMSP EA +G
Sbjct: 124 PSGAATGQSTDIQITAKEIIRTKDTLTEIVAKHTGKPVDEVREKTDRDFYMSPEEAKAFG 183
Query: 246 IIDGV 250
+ID +
Sbjct: 184 VIDEI 188
>gi|116494470|ref|YP_806204.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
ATCC 334]
gi|191637855|ref|YP_001987021.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
BL23]
gi|227535562|ref|ZP_03965611.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239631219|ref|ZP_04674250.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065981|ref|YP_003788004.1| protease subunit of ATP-dependent Clp protease [Lactobacillus casei
str. Zhang]
gi|385819597|ref|YP_005855984.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
LC2W]
gi|385822757|ref|YP_005859099.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
BD-II]
gi|409996716|ref|YP_006751117.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
W56]
gi|417980164|ref|ZP_12620845.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
12A]
gi|417983027|ref|ZP_12623671.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
21/1]
gi|417986255|ref|ZP_12626827.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
32G]
gi|417989138|ref|ZP_12629656.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
A2-362]
gi|417992464|ref|ZP_12632821.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
CRF28]
gi|417995747|ref|ZP_12636034.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
M36]
gi|417998682|ref|ZP_12638898.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
T71499]
gi|418004665|ref|ZP_12644681.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
UW1]
gi|418010374|ref|ZP_12650152.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
Lc-10]
gi|418013339|ref|ZP_12652983.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
Lpc-37]
gi|122264104|sp|Q03AL0.1|CLPP_LACC3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706456|sp|B3WCR2.1|CLPP_LACCB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116104620|gb|ABJ69762.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
casei ATCC 334]
gi|190712157|emb|CAQ66163.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Lactobacillus casei BL23]
gi|227186809|gb|EEI66876.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239525684|gb|EEQ64685.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300438388|gb|ADK18154.1| Protease subunit of ATP-dependent Clp protease [Lactobacillus casei
str. Zhang]
gi|327381924|gb|AEA53400.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
LC2W]
gi|327385084|gb|AEA56558.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
BD-II]
gi|406357728|emb|CCK21998.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
W56]
gi|410525391|gb|EKQ00293.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
12A]
gi|410526448|gb|EKQ01335.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
32G]
gi|410529040|gb|EKQ03872.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
21/1]
gi|410533455|gb|EKQ08134.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
CRF28]
gi|410536451|gb|EKQ11044.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
M36]
gi|410539480|gb|EKQ14009.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
A2-362]
gi|410540523|gb|EKQ15036.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
T71499]
gi|410549203|gb|EKQ23378.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
UW1]
gi|410554098|gb|EKQ28082.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
Lc-10]
gi|410555865|gb|EKQ29796.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
Lpc-37]
Length = 196
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L ++D +A+++I+QLL LDAQD KDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +A+ D + +++DV T+A+GM+AS AS++L GGTKGKRFA+PN+ ++IHQP GGA GQ
Sbjct: 72 SGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A EI+ + +I++ TG++ EQ++KD +RD YMS EA +YG+ID ++
Sbjct: 132 QTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKDYGLIDDIL 189
>gi|410636602|ref|ZP_11347195.1| ATP-dependent Clp protease, protease subunit [Glaciecola lipolytica
E3]
gi|410143884|dbj|GAC14400.1| ATP-dependent Clp protease, protease subunit [Glaciecola lipolytica
E3]
Length = 209
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 125/172 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLKE ++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGGS++A MAIY
Sbjct: 28 DIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIY 87
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + ++ DVSTV +G +AS + +L GG KGKR+ +PN+RVMIHQP+GG GQ D EI
Sbjct: 88 DTMNFIKPDVSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
A+EI+ K+ R+++ TG+ +E+V +D DRD ++S E+ EYG+ID V+
Sbjct: 148 HAKEILSIKEKLNRLMAEHTGQDYEKVARDTDRDNFLSASESKEYGLIDQVL 199
>gi|254774529|ref|ZP_05216045.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 196
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 125/173 (72%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LL ERI+FLG+ ++D VA+ + +Q+LLL A+DPTKDI L++NSPGGS+SA MAIYD + L
Sbjct: 18 LLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDISLYINSPGGSISAGMAIYDTMVL 77
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
D++T A+GM+AS +L GTKGKR+A+P+ R+++HQP+GG +G D+ IQA +
Sbjct: 78 APCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQF 137
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 257
K R+ + FTG+S E+++ D DRDR+ + EA+EYG +D +I R + I
Sbjct: 138 HVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFVDHIITRAATI 190
>gi|23099911|ref|NP_693377.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
gi|60389793|sp|Q8ENM5.1|CLPP_OCEIH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22778142|dbj|BAC14412.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
Length = 193
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD V+++I++QLL L+A+DP KDI L++NSPGGS++
Sbjct: 13 RGERAYDIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPDKDISLYINSPGGSIT 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + ++ +VST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GG GQ
Sbjct: 73 AGMAIYDTMNFIKPNVSTICIGMAASMGAFLLTAGEKGKRFALPNSEIMIHQPLGGTQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EI A+ I+ K I++ TG+ E +++D +RD +M+ ++VEYG+ID +++R
Sbjct: 133 ATDIEIHAKRIIDIKRRMNEIMAEKTGQPIEVIERDTERDNFMTADQSVEYGLIDKILER 192
>gi|34558484|ref|NP_908299.1| ATP-dependent Clp protease proteolytic subunit [Wolinella
succinogenes DSM 1740]
gi|60389700|sp|Q7M7M3.1|CLPP_WOLSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481778|emb|CAE11199.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT [Wolinella
succinogenes]
Length = 195
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 126/174 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D LLK+RI+ L I+D VA +I+SQ+L L+A+DP KDI L++NSPGG +++ M+IY
Sbjct: 19 DIYSRLLKDRIIMLSGEINDGVASSIVSQMLFLEAEDPEKDIYLYINSPGGVITSGMSIY 78
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D + V+ D+ T+ +G +AS + +L GTKGKRF++PN+R+MIHQP+GGA GQ D+EI
Sbjct: 79 DTMNYVKPDICTICIGQAASMGAFLLSCGTKGKRFSLPNSRIMIHQPLGGAQGQATDIEI 138
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
QA+EI+ K I++ TG+ E++ KD DRD +MS E+ EYG+ID V+++
Sbjct: 139 QAKEILRLKSILNGILASNTGQPLEKIAKDTDRDFFMSAQESKEYGLIDNVLEK 192
>gi|238919011|ref|YP_002932525.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
gi|259585951|sp|C5BCJ6.1|CLPP_EDWI9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238868579|gb|ACR68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
Length = 206
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 133/197 (67%), Gaps = 1/197 (0%)
Query: 56 QRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDA 114
QR+ ++ P RG + D LLKERI+FL ++D +A+ I++Q+L L+A
Sbjct: 6 QRELAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 65
Query: 115 QDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRF 174
++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G + S S +L G +GKRF
Sbjct: 66 ENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRF 125
Query: 175 AMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDR 234
+PN+RVMIHQP+GG GQ D+EI A+EI+ K +++ +G+ E +++D +RDR
Sbjct: 126 CLPNSRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPIEVIERDTERDR 185
Query: 235 YMSPIEAVEYGIIDGVI 251
+MS +AVEYG++D V+
Sbjct: 186 FMSAQDAVEYGLVDAVL 202
>gi|427714259|ref|YP_007062883.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378388|gb|AFY62340.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 198
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 127/173 (73%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +ERI+FLG ++DD +A+ I++ +L LD++DP KDI L++NSPGGS++A MAIY
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIY 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV T+ +G++AS S +L GTKGKR A+P++R+MIHQP GG GQ D+EI
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 252
+AREI+ + + TG+ E+++KD+DRD +MS EA +YG+ID VI+
Sbjct: 142 EAREILRIRRQLNNLYVHHTGQVLEKIEKDMDRDYFMSAQEAKDYGLIDRVIE 194
>gi|169824905|ref|YP_001692516.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297587291|ref|ZP_06945936.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302379561|ref|ZP_07268046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|303234189|ref|ZP_07320835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|417926693|ref|ZP_12570084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna SY403409CC001050417]
gi|167831710|dbj|BAG08626.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297575272|gb|EFH93991.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302312468|gb|EFK94464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|302494730|gb|EFL54490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|341588445|gb|EGS31843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna SY403409CC001050417]
Length = 195
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 133/189 (70%), Gaps = 1/189 (0%)
Query: 64 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
S P + RG + D LLKERI+F+ ++D +AD +I+QLL L+++DP KDI+
Sbjct: 3 SLVPMVVEQSNRGERSYDIFSRLLKERIIFVTGEVNDQMADLVIAQLLFLESEDPKKDIQ 62
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
L++NSPGGS+SA +AIYD +Q V+ DVST+ +GM+AS +++L G KGKR+A+PN +
Sbjct: 63 LYINSPGGSVSAGLAIYDTMQYVKPDVSTICVGMAASMGAILLTSGAKGKRYALPNADTL 122
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
IHQP+GGA GQ D+EI A+ I+ ++ +I+S TG+ E++++D DRD ++ EA
Sbjct: 123 IHQPLGGAQGQASDIEIHAKNILKKRELLNKILSERTGQPLEKIERDTDRDFILTAEEAK 182
Query: 243 EYGIIDGVI 251
EYG+ID VI
Sbjct: 183 EYGLIDEVI 191
>gi|116622996|ref|YP_825152.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Solibacter usitatus Ellin6076]
gi|116226158|gb|ABJ84867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Solibacter usitatus Ellin6076]
Length = 206
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 137/194 (70%), Gaps = 7/194 (3%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLKE I+FLG IDD VA+ II+QLL L+A+DP KDI ++VNSPGGS++
Sbjct: 16 RGERAYDIYSRLLKENIIFLGTPIDDQVANLIIAQLLFLEAEDPEKDISIYVNSPGGSIT 75
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP-MGGASG 192
A +AI D + +R D+ T+ +G +AS A+++L GTKGKRF++PN+R+MIHQP M G +G
Sbjct: 76 AGLAILDTMAFIRPDIVTICVGQAASMAAVLLAKGTKGKRFSLPNSRIMIHQPSMQGLAG 135
Query: 193 QVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI- 251
Q D++I AREI+ ++ +++ TG+S E+V KD+DRD M P +AV YG+ID VI
Sbjct: 136 QAADIDIYAREILRMREILNSMLADATGQSIERVAKDVDRDYIMEPDQAVNYGMIDRVIT 195
Query: 252 DRDSIIPLVPVPEK 265
RD L PVP K
Sbjct: 196 SRD----LSPVPIK 205
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 130/183 (71%), Gaps = 1/183 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LL+ERI+FLG + A+ I++Q+L L+A+DP KDI L+VNSPGGS++
Sbjct: 11 RGERAFDIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYLYVNSPGGSVT 70
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A + I+D + +R DV T+ +G++AS S +L G KGKR ++PN R+MIHQP+GGA GQ
Sbjct: 71 AGLGIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMIHQPLGGAQGQ 130
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 253
D+EIQA+EI++ K ++ TG+S E++ D +RD ++SP +A+EYG+ID VIDR
Sbjct: 131 ATDIEIQAKEILYLKGLLNGALAKNTGQSLEKITADTERDFFLSPHQAMEYGLIDQVIDR 190
Query: 254 DSI 256
++
Sbjct: 191 HAV 193
>gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222549|sp|Q8DJZ9.1|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2
[Thermosynechococcus elongatus BP-1]
Length = 198
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 127/176 (72%)
Query: 80 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIY 139
D L +ERI+FLG +DD +A+ I++ +L LD++DP KDI L++NSPGGS++A MAIY
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIY 81
Query: 140 DVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEI 199
D +Q +++DV T+ +G++AS S +L GTKGKR A+P++R+MIHQP GG GQ D+EI
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 200 QAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 255
+AREI+ + + + TG+ E++++D+DRD +MS EA YG+ID VI+ S
Sbjct: 142 EAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNYGLIDRVIEERS 197
>gi|418001574|ref|ZP_12641714.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
UCD174]
gi|410546346|gb|EKQ20605.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
UCD174]
Length = 196
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ L ++D +A+++I+QLL LDAQD KDI L++NSPGG ++
Sbjct: 12 RGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYLYINSPGGVIT 71
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
+ +A+ D + +++DV T+A+GM+AS AS++L GGTKGKRFA+PN+ ++IHQP GGA GQ
Sbjct: 72 SGLAMMDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILIHQPSGGAQGQ 131
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
++EI A EI+ + +I++ TG++ EQ++KD +RD YMS EA +YG+ID ++
Sbjct: 132 QTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKDYGLIDDIL 189
>gi|392417291|ref|YP_006453896.1| protease subunit of ATP-dependent protease [Mycobacterium chubuense
NBB4]
gi|390617067|gb|AFM18217.1| protease subunit of ATP-dependent protease [Mycobacterium chubuense
NBB4]
Length = 203
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 132/194 (68%), Gaps = 12/194 (6%)
Query: 72 TAMRGAEADAMGL---------LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIR 122
T MRGA A GL LL ERI+FLG+ +DD +A+ + +Q+LLL A+DPTKDI
Sbjct: 2 TDMRGASA---GLNLVDSVYERLLSERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIH 58
Query: 123 LFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVM 182
L++NSPGGS+SA MAIYD + L DV+T A+GM+AS +L GTKGKR+A+P+ R++
Sbjct: 59 LYINSPGGSISAGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARIL 118
Query: 183 IHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAV 242
+HQP+GG +G D+ IQA + K R+ + FTG++ E+++ D DRDR+ + EA+
Sbjct: 119 MHQPLGGITGGAADIAIQAEQFASIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEAL 178
Query: 243 EYGIIDGVIDRDSI 256
EYG +D +I SI
Sbjct: 179 EYGFVDHIITSASI 192
>gi|291543930|emb|CBL17039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus
champanellensis 18P13]
Length = 196
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 131/193 (67%), Gaps = 4/193 (2%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
+S P RG + D LL +RI+ L +++D A +++QLL L++QDP KDI
Sbjct: 1 MSLVPYVVEQTSRGERSYDIFSRLLNDRIIMLSEDVNDTTASLVVAQLLYLESQDPDKDI 60
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
L++NSPGGS+SA AIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+ +
Sbjct: 61 SLYINSPGGSVSAGFAIYDTMQYIKCDVSTICIGLAASMGAFLLSSGAKGKRFALPNSEI 120
Query: 182 MIHQPM---GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSP 238
MIHQP+ GG SGQ D++I+ ++ K+N RI+S TG+S E +++D DRD +M+
Sbjct: 121 MIHQPLIGGGGLSGQATDIQIRTENLLRTKENLNRILSENTGKSIEDIRRDTDRDNFMTA 180
Query: 239 IEAVEYGIIDGVI 251
EA+EYG+ID VI
Sbjct: 181 NEAMEYGLIDKVI 193
>gi|224013265|ref|XP_002295284.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969007|gb|EED87350.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 198
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 126/175 (72%)
Query: 77 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATM 136
++ D + LL++RI+ LG +DD +A+ +++QLL L +DPTKDI L++NSPGGS+SA M
Sbjct: 9 SQKDVLSRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLYINSPGGSVSAGM 68
Query: 137 AIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLD 196
AIYD +Q V DVSTV GM+AS + +LG G GKR A+PN R+MIHQP+GGA GQ D
Sbjct: 69 AIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNARIMIHQPLGGAQGQAAD 128
Query: 197 VEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+EIQA+EI+ ++ I+ + + ++++ D DRD +M+ EAV+YGIID +I
Sbjct: 129 IEIQAKEILFIREVLNTYIAEYCDQPKDKIEADCDRDFFMTAEEAVDYGIIDEMI 183
>gi|315127189|ref|YP_004069192.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
gi|315015703|gb|ADT69041.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
Length = 205
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 123/167 (73%)
Query: 85 LLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQL 144
LLKERI+FL ++D +A+ I++Q+L L++++P KDI L++NSPGGS++A MAIYD +
Sbjct: 33 LLKERIIFLTGQVEDNMANLILAQMLFLESENPEKDIFLYINSPGGSVTAGMAIYDTMNF 92
Query: 145 VRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREI 204
++ DVST+ +G +AS + +L GG KGKRF +PN+RVMIHQP+GG GQ D EI A+EI
Sbjct: 93 IKPDVSTICVGQAASMGAFLLSGGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEI 152
Query: 205 MHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 251
+ KD R+++ TG+ + V +D DRD +MS +AV+YGI+D V
Sbjct: 153 LSIKDKLNRLMAEHTGQPLDVVSRDTDRDNFMSASQAVDYGIVDSVF 199
>gi|89900346|ref|YP_522817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodoferax
ferrireducens T118]
gi|89345083|gb|ABD69286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodoferax
ferrireducens T118]
Length = 209
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 132/192 (68%), Gaps = 1/192 (0%)
Query: 63 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDI 121
L P + RG + D LLKER++FL ++D+VA+ +++QLL L++ +P KDI
Sbjct: 16 LGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDYVANLVVAQLLFLESDNPDKDI 75
Query: 122 RLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRV 181
++NSPGGS+SA MAI+D + V+ DVST+ GM+AS + +L G KGKRF++PN++V
Sbjct: 76 SFYINSPGGSVSAGMAIFDTMNFVKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSKV 135
Query: 182 MIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 241
MIHQP GG+ GQ ++EIQAREI+ ++ +I++ TG+ ++++D +RD YMS E
Sbjct: 136 MIHQPSGGSQGQATEIEIQAREILKTREQLNKILAERTGQPLARIERDTERDYYMSADEC 195
Query: 242 VEYGIIDGVIDR 253
EYG+ID VI +
Sbjct: 196 KEYGLIDQVISK 207
>gi|422413983|ref|ZP_16490942.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Listeria innocua FSL S4-378]
gi|313617264|gb|EFR89730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL S4-378]
Length = 183
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Query: 75 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLS 133
RG A D LLK+RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+S
Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSIS 72
Query: 134 ATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQ 193
A MAIYD + V+ADV T+ +GM+AS S +L G GKRFA+PN +MIHQP+GGA GQ
Sbjct: 73 AGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQ 132
Query: 194 VLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 244
++EI AR I+ K+ I++ TG+ +E + +D DRD +M+ EA +Y
Sbjct: 133 ATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDY 183
>gi|78485521|ref|YP_391446.1| ATP-dependent Clp protease proteolytic subunit [Thiomicrospira
crunogena XCL-2]
gi|110816468|sp|Q31GF1.1|CLPP_THICR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78363807|gb|ABB41772.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiomicrospira
crunogena XCL-2]
Length = 200
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 133/198 (67%), Gaps = 3/198 (1%)
Query: 59 HDVPLSSA--PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQ 115
H P+ A P RG + D LLKER++FL ++D +A+ I++QLL L+++
Sbjct: 2 HSTPIQDALVPMVIEQTSRGERSFDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESE 61
Query: 116 DPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFA 175
+P KDI L++NSPGGS++A MAIYD ++ ++ DVST+ +G +AS S +L G +GKR+A
Sbjct: 62 NPDKDIHLYINSPGGSVTAGMAIYDTMRFIKPDVSTMCIGQAASMGSFLLSAGAEGKRYA 121
Query: 176 MPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRY 235
+PN+RVMIHQP+GG GQ D+EI A+EI+ K + ++ TG+ E ++ D DRD +
Sbjct: 122 LPNSRVMIHQPLGGFQGQASDIEIHAKEIIQIKQKLNKALADHTGQPIEVIENDTDRDNF 181
Query: 236 MSPIEAVEYGIIDGVIDR 253
MS EA +YG++D V+ R
Sbjct: 182 MSADEACDYGLVDKVLTR 199
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,496,743,815
Number of Sequences: 23463169
Number of extensions: 183989465
Number of successful extensions: 623740
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5939
Number of HSP's successfully gapped in prelim test: 1018
Number of HSP's that attempted gapping in prelim test: 614851
Number of HSP's gapped (non-prelim): 7039
length of query: 293
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 152
effective length of database: 9,050,888,538
effective search space: 1375735057776
effective search space used: 1375735057776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)