BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041854
MGAAETEIIRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSG
PGVYELGIVASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGSGCFD
DIFSRRHAIAYRRAPVGVHPFENF

High Scoring Gene Products

Symbol, full name Information P value
ET2
AT5G56780 		protein from Arabidopsis thaliana 5.2e-28
AT5G56770 protein from Arabidopsis thaliana 1.2e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041854
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2165026 - symbol:ET2 "AT5G56780" species:3702 ...   315  5.2e-28   1
TAIR|locus:2165011 - symbol:AT5G56770 "AT5G56770" species...   215  1.2e-17   1


>TAIR|locus:2165026 [details] [associations]
            symbol:ET2 "AT5G56780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 IPI:IPI00519345 RefSeq:NP_200489.2
            UniGene:At.29366 ProteinModelPortal:F4K933
            EnsemblPlants:AT5G56780.1 GeneID:835780 KEGG:ath:AT5G56780
            OMA:WNKGSNG ArrayExpress:F4K933 Uniprot:F4K933
        Length = 483

 Score = 315 (115.9 bits), Expect = 5.2e-28, P = 5.2e-28
 Identities = 70/140 (50%), Positives = 86/140 (61%)

Query:    12 KREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGI-VA 70
             KRE+ KRTKHD  FSKW++L+G++DW D+  GK+G  RYRV NLP  S PG+YELG+ V 
Sbjct:    17 KREDYKRTKHDTVFSKWQVLIGSNDWEDFKNGKDGVGRYRVQNLPRKSCPGLYELGVAVI 76

Query:    71 XXXXXXXXXXXXXXXXYLGQADSVRTRLQCYGRSGAHLNN-NPSNG------------SG 117
                             YLGQA+SVR+RLQ YGRSGAHL N N  N              G
Sbjct:    77 GQEQCRKLEPDIVLASYLGQAESVRSRLQRYGRSGAHLRNVNNLNDCETIESPVKAVTGG 136

Query:   118 CFDDIFSRRHAIAYRRAPVG 137
              F+DIFS+  +I YR AP+G
Sbjct:   137 LFEDIFSKGGSILYRWAPMG 156


>TAIR|locus:2165011 [details] [associations]
            symbol:AT5G56770 "AT5G56770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB013392
            IPI:IPI00528926 RefSeq:NP_200488.1 UniGene:At.55593
            ProteinModelPortal:Q9FJT6 EnsemblPlants:AT5G56770.1 GeneID:835779
            KEGG:ath:AT5G56770 TAIR:At5g56770 eggNOG:NOG241900
            HOGENOM:HOG000152508 OMA:NHIRHTI PhylomeDB:Q9FJT6
            ProtClustDB:CLSN2916789 Genevestigator:Q9FJT6 Uniprot:Q9FJT6
        Length = 254

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 51/126 (40%), Positives = 68/126 (53%)

Query:    12 KREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGI--V 69
             KRE+ K T HD  FSKW+ L+  +DW D+   KE   RYR  +LP     G+YELG+  +
Sbjct:    56 KREDYKLTIHDIAFSKWRNLIRHNDWKDFNNRKERVRRYRHEDLPPQRCTGLYELGVGVI 115

Query:    70 AXXXXXXXXXXXXXXXXYLGQADSVRTRLQCYGRSGAHLNNNPSNGSGCFDDIFSRRHAI 129
                              Y+GQ   V++RLQ YGR G HL   PS   G ++DIFS  +++
Sbjct:   116 GQDQGQNFDPDNNVLGVYVGQCVDVKSRLQDYGRRGGHL---PS---GLYEDIFSEGYSV 169

Query:   130 AYRRAP 135
              YR AP
Sbjct:   170 FYRWAP 175


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       128   0.00091  102 3  11 22  0.39    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.05u 0.11s 11.16t   Elapsed:  00:00:01
  Total cpu time:  11.05u 0.11s 11.16t   Elapsed:  00:00:01
  Start:  Sat May 11 08:28:16 2013   End:  Sat May 11 08:28:17 2013

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