BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041854
(144 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224091306|ref|XP_002309221.1| predicted protein [Populus trichocarpa]
gi|222855197|gb|EEE92744.1| predicted protein [Populus trichocarpa]
Length = 689
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 102/145 (70%), Gaps = 18/145 (12%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R+KRE+ KRTKHD+ FSKW++L+G SDW DY LGKEGA RYR+HNLP+TSGPG+YELGI
Sbjct: 6 RLKREDYKRTKHDSSFSKWQLLIGPSDWQDYFLGKEGASRYRIHNLPTTSGPGLYELGIA 65
Query: 70 ASRSRTDRID-----SDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGS-------- 116
RS R D DD+VVVYLGQAD+VRTRLQ YGRSGAHL N S G
Sbjct: 66 VPRSGLSRRDVGKLVRDDIVVVYLGQADNVRTRLQQYGRSGAHLGNTYSTGHVNDSKDDS 125
Query: 117 -----GCFDDIFSRRHAIAYRRAPV 136
G F++IFSR +I YR AP+
Sbjct: 126 LQKGLGLFEEIFSRGQSIVYRWAPM 150
>gi|449435840|ref|XP_004135702.1| PREDICTED: uncharacterized protein LOC101208130 [Cucumis sativus]
gi|449522410|ref|XP_004168219.1| PREDICTED: uncharacterized protein LOC101231195 [Cucumis sativus]
Length = 478
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 15/149 (10%)
Query: 3 AAETEIIRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPG 62
AE IR+KRE+CKRTKHD+ FSKW+ILV +SDW DY LGKEGA+RYR+HNLP SGPG
Sbjct: 2 VAELSPIRLKREDCKRTKHDSDFSKWEILVASSDWEDYSLGKEGAERYRIHNLPKVSGPG 61
Query: 63 VYELGIVASRSRTDR----IDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNN-------- 110
+YELGI S S R +D+D +VVVYLG+AD+VRTRLQ YGRSG+HL N
Sbjct: 62 LYELGITVSSSGLGREIAKLDADWIVVVYLGEADNVRTRLQHYGRSGSHLGNAYFCVVDC 121
Query: 111 ---NPSNGSGCFDDIFSRRHAIAYRRAPV 136
G F ++FSR ++I YR AP+
Sbjct: 122 KVFPLEKGPSLFQEMFSRGYSIVYRWAPM 150
>gi|255546179|ref|XP_002514149.1| conserved hypothetical protein [Ricinus communis]
gi|223546605|gb|EEF48103.1| conserved hypothetical protein [Ricinus communis]
Length = 499
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 105/158 (66%), Gaps = 22/158 (13%)
Query: 1 MGAAETEII-----RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNL 55
M A+E + R+KRE+ KRTKHD HFSKW+ILVG DW DY GKEGA RYRVHNL
Sbjct: 1 MAASENSSVPAAASRLKREDYKRTKHDTHFSKWQILVGPCDWEDYSQGKEGATRYRVHNL 60
Query: 56 PSTSGPGVYELGIVASRS----RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLN-- 109
P+ S PG+YELGI SRS +ID DD+ VVYLGQAD+VR+RLQ YGRSG+HL
Sbjct: 61 PTRSYPGLYELGIAVSRSGLGREVGKIDPDDIAVVYLGQADNVRSRLQHYGRSGSHLGAS 120
Query: 110 -----------NNPSNGSGCFDDIFSRRHAIAYRRAPV 136
+P G G F++IF R H+IA+R AP+
Sbjct: 121 YATSHWNDSKIESPQKGPGLFEEIFLRGHSIAFRWAPM 158
>gi|225444967|ref|XP_002279809.1| PREDICTED: uncharacterized protein LOC100264589 [Vitis vinifera]
Length = 491
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 102/155 (65%), Gaps = 19/155 (12%)
Query: 1 MGAAETEII-RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLP-ST 58
M E I+ R+KRE+CKRTKHD+ F+KWKILVG SDW D+ KEGA+RYRVHNLP
Sbjct: 1 MVTTEPPIVSRLKREDCKRTKHDSEFTKWKILVGPSDWEDHSSRKEGAERYRVHNLPLCC 60
Query: 59 SGPGVYELGIVASRS----RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHL-----N 109
PGVYELGI S + ++D +VVVYLGQA+ +R RLQ YGRSGAHL
Sbjct: 61 HCPGVYELGISVSPTGLGREVGKLDPAHIVVVYLGQAEDIRARLQHYGRSGAHLAKVDST 120
Query: 110 NNPSN--------GSGCFDDIFSRRHAIAYRRAPV 136
NP+N GSG F+ IFSR ++I +R AP+
Sbjct: 121 GNPNNCKNMPLQRGSGLFEGIFSRGYSIVFRWAPI 155
>gi|297738689|emb|CBI27934.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 102/155 (65%), Gaps = 19/155 (12%)
Query: 1 MGAAETEII-RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLP-ST 58
M E I+ R+KRE+CKRTKHD+ F+KWKILVG SDW D+ KEGA+RYRVHNLP
Sbjct: 1 MVTTEPPIVSRLKREDCKRTKHDSEFTKWKILVGPSDWEDHSSRKEGAERYRVHNLPLCC 60
Query: 59 SGPGVYELGIVASRS----RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHL-----N 109
PGVYELGI S + ++D +VVVYLGQA+ +R RLQ YGRSGAHL
Sbjct: 61 HCPGVYELGISVSPTGLGREVGKLDPAHIVVVYLGQAEDIRARLQHYGRSGAHLAKVDST 120
Query: 110 NNPSN--------GSGCFDDIFSRRHAIAYRRAPV 136
NP+N GSG F+ IFSR ++I +R AP+
Sbjct: 121 GNPNNCKNMPLQRGSGLFEGIFSRGYSIVFRWAPI 155
>gi|2104685|emb|CAA66483.1| transcripteion factor [Vicia faba var. minor]
Length = 377
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIVA 70
+KREECK TKHD+ FS WKIL+G SDW DY GKEG+ RYR+ NLP SGPGVYELG+
Sbjct: 10 LKREECKHTKHDSSFSHWKILIGPSDWEDYSKGKEGSTRYRIQNLPQNSGPGVYELGVAM 69
Query: 71 SRSRTDR---IDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSN-------GSGCFD 120
S S R + VVVVYLG+AD+VRTRLQ YGR+GAHL N S G F
Sbjct: 70 STSGLGREIYKLATRVVVVYLGKADNVRTRLQSYGRNGAHLGNGCSTFESSEEKGHSLFH 129
Query: 121 DIFSRRHAIAYRRAPV 136
DIF + I YR AP+
Sbjct: 130 DIFFQSFPIVYRWAPM 145
>gi|357501273|ref|XP_003620925.1| Transcripteion factor [Medicago truncatula]
gi|355495940|gb|AES77143.1| Transcripteion factor [Medicago truncatula]
Length = 368
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 92/139 (66%), Gaps = 13/139 (9%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIVA 70
+KRE+C TKHD+ FS WKIL+G SDW DY GKEG+ RYR+HNLP SGPGVYELG+ A
Sbjct: 2 LKREQCDYTKHDSSFSHWKILIGPSDWEDYSKGKEGSTRYRIHNLPENSGPGVYELGVAA 61
Query: 71 SRSRTDR------IDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSN-------GSG 117
S S R DS VVVVYLG+ D+VRTRLQCYGR+GAHL N S+ G
Sbjct: 62 STSGLGREIYKLSTDSCRVVVVYLGKGDNVRTRLQCYGRNGAHLGNGCSSFESSHQKGHS 121
Query: 118 CFDDIFSRRHAIAYRRAPV 136
F +IF + I YR A +
Sbjct: 122 LFHEIFLQGFPIVYRWASM 140
>gi|297796565|ref|XP_002866167.1| hypothetical protein ARALYDRAFT_918835 [Arabidopsis lyrata subsp.
lyrata]
gi|297312002|gb|EFH42426.1| hypothetical protein ARALYDRAFT_918835 [Arabidopsis lyrata subsp.
lyrata]
Length = 485
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 98/141 (69%), Gaps = 15/141 (10%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGI-V 69
KRE KRTKHDA FSKW++L+G++DW D+ GK+G RYRVHNLP S PG+YELG+ V
Sbjct: 16 FKRENYKRTKHDAVFSKWQVLIGSNDWEDFQTGKDGVGRYRVHNLPRKSCPGLYELGVAV 75
Query: 70 ASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNN-----------NPSNGS-- 116
+ + +++SDDV+ YLGQA+SVR+RLQ YGRSGAHL N +P +
Sbjct: 76 IGQDQGRKLESDDVLAAYLGQAESVRSRLQRYGRSGAHLRNVNNLNDCETIESPVKKAVT 135
Query: 117 -GCFDDIFSRRHAIAYRRAPV 136
G F+DIFS++ +I YR AP+
Sbjct: 136 GGLFEDIFSKQGSILYRWAPM 156
>gi|242050714|ref|XP_002463101.1| hypothetical protein SORBIDRAFT_02g037860 [Sorghum bicolor]
gi|241926478|gb|EER99622.1| hypothetical protein SORBIDRAFT_02g037860 [Sorghum bicolor]
Length = 548
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 93/141 (65%), Gaps = 17/141 (12%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R+KRE+C RTKHD+ FS WK+LVG SDW D+ GKEG RYR+ NLP + PG+YELG+
Sbjct: 11 RLKREDCPRTKHDSLFSPWKVLVGPSDWKDHAAGKEGVQRYRIRNLPD-NFPGLYELGVA 69
Query: 70 ASRS---RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGS---------- 116
+ RT R D+ VVVVYLGQADSVR RLQ YGRSG+HL+ S GS
Sbjct: 70 GAADEGVRTRRRDARGVVVVYLGQADSVRARLQQYGRSGSHLDTANSLGSAGKDAVNALA 129
Query: 117 ---GCFDDIFSRRHAIAYRRA 134
G F ++FSR +++ +R A
Sbjct: 130 AGPGLFREVFSRGYSVVFRCA 150
>gi|323388729|gb|ADX60169.1| HRT transcription factor [Zea mays]
Length = 538
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 95/141 (67%), Gaps = 17/141 (12%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R+KRE+C RTKHD+ FS WK+LVG SDW D+ GKEG RYR+ NLP + PG+YELG+
Sbjct: 11 RLKREDCPRTKHDSLFSPWKVLVGPSDWRDHAAGKEGVQRYRIRNLPD-NFPGLYELGVA 69
Query: 70 ASRS---RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLN--NNP-----------S 113
+ R+ R D+ VVVVYLGQADSVR RLQ YGRSG+HL+ N+P +
Sbjct: 70 CAADEGVRSRRRDARGVVVVYLGQADSVRARLQQYGRSGSHLDTTNSPGSSDRDAANALA 129
Query: 114 NGSGCFDDIFSRRHAIAYRRA 134
G G F ++FSR +++ +R A
Sbjct: 130 EGPGLFREVFSRGYSVVFRCA 150
>gi|212276328|ref|NP_001130774.1| uncharacterized protein LOC100191878 [Zea mays]
gi|194690082|gb|ACF79125.1| unknown [Zea mays]
Length = 538
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 93/141 (65%), Gaps = 17/141 (12%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R+KRE+C RTKHD+ FS WK+LVG SDW D+ GKEG RYR+ NLP + PG+YELG+
Sbjct: 11 RLKREDCPRTKHDSLFSPWKVLVGPSDWRDHAAGKEGVQRYRIRNLPD-NFPGLYELGVA 69
Query: 70 ASRS---RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGS---------- 116
+ R+ R D+ VVVVYLGQADSVR RLQ YGRSG+HL+ S GS
Sbjct: 70 CAADEGVRSRRRDARGVVVVYLGQADSVRARLQQYGRSGSHLDTTNSPGSSDRDAANALA 129
Query: 117 ---GCFDDIFSRRHAIAYRRA 134
G F ++FSR +++ +R A
Sbjct: 130 EGPGLFREVFSRGYSVVFRCA 150
>gi|145359333|ref|NP_200489.2| effector of transcription2 [Arabidopsis thaliana]
gi|332009423|gb|AED96806.1| effector of transcription2 [Arabidopsis thaliana]
Length = 483
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 94/141 (66%), Gaps = 14/141 (9%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGI-V 69
KRE+ KRTKHD FSKW++L+G++DW D+ GK+G RYRV NLP S PG+YELG+ V
Sbjct: 16 FKREDYKRTKHDTVFSKWQVLIGSNDWEDFKNGKDGVGRYRVQNLPRKSCPGLYELGVAV 75
Query: 70 ASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNN-----------NPSNG--S 116
+ + +++ D V+ YLGQA+SVR+RLQ YGRSGAHL N +P
Sbjct: 76 IGQEQCRKLEPDIVLASYLGQAESVRSRLQRYGRSGAHLRNVNNLNDCETIESPVKAVTG 135
Query: 117 GCFDDIFSRRHAIAYRRAPVG 137
G F+DIFS+ +I YR AP+G
Sbjct: 136 GLFEDIFSKGGSILYRWAPMG 156
>gi|356520864|ref|XP_003529080.1| PREDICTED: uncharacterized protein LOC100784450 [Glycine max]
Length = 426
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 88/133 (66%), Gaps = 9/133 (6%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R KRE+C RTKHD+ FS WKIL+G DW D+ GKEG RYR+HNLP SGPGVYELGI
Sbjct: 7 RFKREQCNRTKHDSSFSHWKILIGPRDWEDHSKGKEGCSRYRIHNLPQQSGPGVYELGIA 66
Query: 70 ASRSRTDR------IDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGSGCFDDIF 123
A+ S ++R +VVVYLGQ ++VR RL+ YG +G HL ++ + F +F
Sbjct: 67 AAASVSERKIYKLVPHRHRIVVVYLGQTENVRERLRRYGGNGDHLEDSSLH---LFQQVF 123
Query: 124 SRRHAIAYRRAPV 136
S+ +I YR AP+
Sbjct: 124 SQGFSILYRWAPM 136
>gi|10176782|dbj|BAB09896.1| unnamed protein product [Arabidopsis thaliana]
Length = 488
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 94/146 (64%), Gaps = 19/146 (13%)
Query: 11 IKREECKRTKHDAHFSKWK-----ILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYE 65
KRE+ KRTKHD FSKW+ +L+G++DW D+ GK+G RYRV NLP S PG+YE
Sbjct: 16 FKREDYKRTKHDTVFSKWQFDAAQVLIGSNDWEDFKNGKDGVGRYRVQNLPRKSCPGLYE 75
Query: 66 LGI-VASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNN-----------NPS 113
LG+ V + + +++ D V+ YLGQA+SVR+RLQ YGRSGAHL N +P
Sbjct: 76 LGVAVIGQEQCRKLEPDIVLASYLGQAESVRSRLQRYGRSGAHLRNVNNLNDCETIESPV 135
Query: 114 NG--SGCFDDIFSRRHAIAYRRAPVG 137
G F+DIFS+ +I YR AP+G
Sbjct: 136 KAVTGGLFEDIFSKGGSILYRWAPMG 161
>gi|357122181|ref|XP_003562794.1| PREDICTED: uncharacterized protein LOC100831711 [Brachypodium
distachyon]
Length = 547
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 90/144 (62%), Gaps = 17/144 (11%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R+KRE+C RTKHD+ FS WK+LVG SDW D+ GKEG RY NLP PG+YELG+
Sbjct: 10 RLKREDCPRTKHDSLFSPWKVLVGPSDWEDHAAGKEGVQRYHTLNLPDNF-PGLYELGVA 68
Query: 70 ASRS---RTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNN-NPS------------ 113
S R R VVV+YLGQAD+VR RLQ YGR+G+HL+ NPS
Sbjct: 69 RPSSEGVRARRNLLGGVVVMYLGQADNVRARLQQYGRTGSHLDTGNPSVSVCKAEMNMLE 128
Query: 114 NGSGCFDDIFSRRHAIAYRRAPVG 137
G G F ++FSR +++ +R A +G
Sbjct: 129 AGPGLFREVFSRGYSVVFRCALMG 152
>gi|357509455|ref|XP_003625016.1| hypothetical protein MTR_7g090060 [Medicago truncatula]
gi|134054013|gb|ABD28323.2| Excinuclease ABC, C subunit, N-terminal, putative [Medicago
truncatula]
gi|355500031|gb|AES81234.1| hypothetical protein MTR_7g090060 [Medicago truncatula]
Length = 441
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 81/130 (62%), Gaps = 14/130 (10%)
Query: 21 HDAHFSKW-KILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIVASRSRTDR-- 77
HD +F+ KIL+G SDW DY KEG+ RYR+HNLP GPGVYELG+ SRS R
Sbjct: 77 HDNNFTSCAKILIGPSDWEDYSKEKEGSTRYRIHNLPQKLGPGVYELGVAVSRSNLGREI 136
Query: 78 ----IDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSN-------GSGCFDDIFSRR 126
D +VVVYLG+AD+VR RLQ YGR+GAHL+N + G F +IFS+
Sbjct: 137 YKLSTDPRRIVVVYLGKADNVRARLQRYGRNGAHLSNTCMSDDSSLRTGRSLFQEIFSQG 196
Query: 127 HAIAYRRAPV 136
I YR AP+
Sbjct: 197 FPIVYRWAPM 206
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGAS 35
R+KRE+C RTKHD+ FS+WK + S
Sbjct: 5 RLKREQCDRTKHDSSFSRWKFYMKLS 30
>gi|125558979|gb|EAZ04515.1| hypothetical protein OsI_26666 [Oryza sativa Indica Group]
Length = 622
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 96/158 (60%), Gaps = 22/158 (13%)
Query: 1 MGAAETEI-IRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTS 59
M AA T + R+KRE+ RTKHD+ FS WK+LVG SDW D+ GKEG RYRV NLP
Sbjct: 1 MPAASTAVPARLKREDYPRTKHDSLFSPWKVLVGPSDWEDHAAGKEGIQRYRVLNLPENF 60
Query: 60 GPGVYELGI-------VASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLN--- 109
PG+YELG+ + + R + VVVVYLGQADSVR RLQ YGR+G+HL+
Sbjct: 61 -PGLYELGVARASDEGIRAARRWNGSGGGGVVVVYLGQADSVRARLQQYGRTGSHLDAGN 119
Query: 110 ----------NNPSNGSGCFDDIFSRRHAIAYRRAPVG 137
N + G+G F ++F R +++ +R A +G
Sbjct: 120 PPPSAGEAETNTRATGNGLFREVFVRGYSLVFRCALMG 157
>gi|168033398|ref|XP_001769202.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679467|gb|EDQ65914.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 577
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTS-GPGVYELGI 68
R++RE+C+ KHD FSKWKILVG SDW+++ GK+G DRY +HNLP++ GPGVYELG+
Sbjct: 118 RLRREDCEYVKHDKLFSKWKILVGPSDWSEHSAGKDGIDRYHLHNLPASHFGPGVYELGV 177
Query: 69 VAS-------RSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSN 114
A R + +DV+ VY+GQAD++R RLQ YG++G+HL + S
Sbjct: 178 TAPSWTPTSHSQRRRSLKREDVLAVYVGQADNIRQRLQQYGQAGSHLEGSGST 230
>gi|115473065|ref|NP_001060131.1| Os07g0586700 [Oryza sativa Japonica Group]
gi|23617230|dbj|BAC20898.1| putative probable transcription repressor HOTR [Oryza sativa
Japonica Group]
gi|113611667|dbj|BAF22045.1| Os07g0586700 [Oryza sativa Japonica Group]
gi|125600894|gb|EAZ40470.1| hypothetical protein OsJ_24924 [Oryza sativa Japonica Group]
Length = 622
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 95/158 (60%), Gaps = 22/158 (13%)
Query: 1 MGAAETEI-IRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTS 59
M AA + R+KRE+ RTKHD+ FS WK+LVG SDW D+ GKEG RYRV NLP
Sbjct: 1 MPAASAAVPARLKREDYPRTKHDSLFSPWKVLVGPSDWEDHAAGKEGIQRYRVLNLPENF 60
Query: 60 GPGVYELGI-------VASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLN--- 109
PG+YELG+ + + R + VVVVYLGQADSVR RLQ YGR+G+HL+
Sbjct: 61 -PGLYELGVARASDEGIRAARRWNGSGGGGVVVVYLGQADSVRARLQQYGRTGSHLDAGN 119
Query: 110 ----------NNPSNGSGCFDDIFSRRHAIAYRRAPVG 137
N + G+G F ++F R +++ +R A +G
Sbjct: 120 PPPSAGEAETNTRATGNGLFREVFVRGYSLVFRCALMG 157
>gi|3550436|emb|CAA04677.1| putative transcription repressor HOTR [Hordeum vulgare subsp.
vulgare]
gi|326488539|dbj|BAJ93938.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 90/144 (62%), Gaps = 17/144 (11%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIV 69
R+KRE+C RTKHD+ FS WK+LVG SDW D+ GKEG RY NLP PG+YELG+
Sbjct: 8 RLKREDCPRTKHDSLFSPWKVLVGPSDWEDHSAGKEGVQRYHTRNLPDNF-PGLYELGVA 66
Query: 70 ASR---SRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNN-NP------------S 113
R R S VVVVYLGQAD+VR RLQ YGR+G+HL+ NP +
Sbjct: 67 RPSYDGVRARRNRSVVVVVVYLGQADNVRARLQQYGRTGSHLDTGNPLAAVCKAEMNALT 126
Query: 114 NGSGCFDDIFSRRHAIAYRRAPVG 137
G G F ++FSR +++ +R A +G
Sbjct: 127 AGPGLFREVFSRGYSMMFRCALMG 150
>gi|302787501|ref|XP_002975520.1| hypothetical protein SELMODRAFT_442874 [Selaginella moellendorffii]
gi|300156521|gb|EFJ23149.1| hypothetical protein SELMODRAFT_442874 [Selaginella moellendorffii]
Length = 684
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 25/161 (15%)
Query: 1 MGAAETEIIRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSG 60
+G + R++REEC KHD +F++WKIL+G SDW D + G+ RYR+HNLPS S
Sbjct: 344 IGRSMASPCRMRREECFAVKHDRYFTRWKILIGHSDWRDSVDSPSGS-RYRLHNLPSKSA 402
Query: 61 --PGVYELGIV------ASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNP 112
PG+YELGIV R + R+ DVV VYLGQA++VR RLQ YG+ G+HL
Sbjct: 403 VRPGIYELGIVRPCSSSRKRKKKKRLHRRDVVAVYLGQAENVRQRLQSYGQGGSHLEGWT 462
Query: 113 S----------------NGSGCFDDIFSRRHAIAYRRAPVG 137
G F +IF+R +++A+R + G
Sbjct: 463 GLEKWLPEKRVLTQIFRQGPRLFSEIFARGYSLAFRWSATG 503
>gi|168045828|ref|XP_001775378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673323|gb|EDQ59848.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 8/107 (7%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTS-GPGVYELGI 68
R++RE+C+ KHD FSKWKIL+G SDW+DY GK G +R +V NLP + GPGVYELG+
Sbjct: 147 RLRREDCEFVKHDKLFSKWKILIGPSDWSDYATGKIGIERCQVQNLPDFNLGPGVYELGV 206
Query: 69 VAS-------RSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHL 108
A R + +DV+ VY+GQA ++R RL YG++GAHL
Sbjct: 207 TAPSWVPTLHSKRPRSLRREDVIAVYVGQAVNIRQRLHKYGQTGAHL 253
>gi|168066639|ref|XP_001785242.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663173|gb|EDQ49953.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 8/119 (6%)
Query: 9 IRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPS-TSGPGVYELG 67
+R+KRE+ KHD FS+W ILVG SDW + G+E DR+R NLPS T G G+YELG
Sbjct: 193 LRLKREDYDSVKHDRCFSEWTILVGPSDWKEQATGREATDRFRSRNLPSPTGGSGIYELG 252
Query: 68 IVASRSRT-DR------IDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGSGCF 119
+ +T DR + S+DV+VVY+G AD++R RLQ YG++GAHL S S F
Sbjct: 253 VTLPAWKTVDRHNEHGIVKSEDVIVVYVGHADNIRKRLQRYGQAGAHLEGTRSLNSSNF 311
>gi|168047575|ref|XP_001776245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672340|gb|EDQ58878.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 628
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 9 IRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPST-SGPGVYELG 67
+R +RE+ KHD +FS+WK+LV SDW + G+ G DR+R NLPS +G G+YELG
Sbjct: 3 LRWRREDFDSVKHDKYFSEWKVLVAPSDWKEQAAGRNGGDRFRYRNLPSPHAGAGIYELG 62
Query: 68 IVASRSRTD-------RIDSDDVVVVYLGQADSVRTRLQCYGRSGAHL 108
I +T+ + S+D++VVY+G AD +R RLQ YG++GAHL
Sbjct: 63 ITLPAWKTEDLLTETGSLKSEDIIVVYVGHADHIRNRLQRYGQAGAHL 110
>gi|297796563|ref|XP_002866166.1| hypothetical protein ARALYDRAFT_918834 [Arabidopsis lyrata subsp.
lyrata]
gi|297312001|gb|EFH42425.1| hypothetical protein ARALYDRAFT_918834 [Arabidopsis lyrata subsp.
lyrata]
Length = 201
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELG--I 68
KRE+ KRT +DA FS WKIL +DW D+ GKEG RYR +LP G+YELG +
Sbjct: 57 FKREDYKRTIYDAIFSDWKILTRPNDWNDFKNGKEGVRRYRHEDLPPIYRTGLYELGVAV 116
Query: 69 VASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGSGCFDDIFSRRHA 128
+ + D D+VV YLGQ+ +++RLQ YGR G HL + F+D+ S+
Sbjct: 117 IGQDDLGQKFDPDNVVPTYLGQSVDMKSRLQDYGRCGGHL------PASLFEDLSSKEFC 170
Query: 129 IAYRRA 134
I +R A
Sbjct: 171 ILFRYA 176
>gi|168038926|ref|XP_001771950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676732|gb|EDQ63211.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 599
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 9/113 (7%)
Query: 4 AETEIIRIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPST-SGPG 62
A+ + R+KRE+ KHD+ FS WK+LVG SDW D+ GK DR+RV NLP++ SG G
Sbjct: 40 AQGKKQRMKREDHAHVKHDSSFSDWKVLVGPSDWKDHACGK-AQDRFRVKNLPTSYSGSG 98
Query: 63 VYELGIVASRSRTDR-------IDSDDVVVVYLGQADSVRTRLQCYGRSGAHL 108
+YELG+ + + DVVVVYLG A+SV LQ YG++GAHL
Sbjct: 99 LYELGVTPPAWLPPQRNNYPGILKPQDVVVVYLGCAESVNYHLQRYGQTGAHL 151
>gi|15241930|ref|NP_200488.1| uncharacterized protein [Arabidopsis thaliana]
gi|10176781|dbj|BAB09895.1| unnamed protein product [Arabidopsis thaliana]
gi|332009422|gb|AED96805.1| uncharacterized protein [Arabidopsis thaliana]
Length = 254
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGI-V 69
KRE+ K T HD FSKW+ L+ +DW D+ KE RYR +LP G+YELG+ V
Sbjct: 55 FKREDYKLTIHDIAFSKWRNLIRHNDWKDFNNRKERVRRYRHEDLPPQRCTGLYELGVGV 114
Query: 70 ASRSRTDRIDSDDVVV-VYLGQADSVRTRLQCYGRSGAHLNNNPSNGSGCFDDIFSRRHA 128
+ + D D+ V+ VY+GQ V++RLQ YGR G HL SG ++DIFS ++
Sbjct: 115 IGQDQGQNFDPDNNVLGVYVGQCVDVKSRLQDYGRRGGHL------PSGLYEDIFSEGYS 168
Query: 129 IAYRRAP 135
+ YR AP
Sbjct: 169 VFYRWAP 175
>gi|357501271|ref|XP_003620924.1| Transcripteion factor [Medicago truncatula]
gi|355495939|gb|AES77142.1| Transcripteion factor [Medicago truncatula]
Length = 159
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 11 IKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIVA 70
+KRE+C TKHD+ FS WK+L+ SDW G G RY+ NLP GVYELG+ +
Sbjct: 49 LKREQCDHTKHDSSFSHWKVLIDPSDW-----GNHGYTRYKKENLPQNFSVGVYELGVGS 103
Query: 71 SRSRTD------RIDSDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNGS 116
S S D VVVVY+G++ VR LQ Y + G HL + ++GS
Sbjct: 104 STSDLGCEIYKLATDPHGVVVVYIGKSVDVRKILQSYSKDGGHLGDGCASGS 155
>gi|168019606|ref|XP_001762335.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686413|gb|EDQ72802.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 596
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 70/134 (52%), Gaps = 36/134 (26%)
Query: 10 RIKREECKRTKHDAHFSKWKI---------------------------LVGASDWADYLL 42
R+KREE KHD FS WK+ LVG+SDW D+
Sbjct: 18 RLKREEYTHVKHDKSFSDWKVFTFDSIEYRAGNSGIIDLSFLHSYLGVLVGSSDWKDHAS 77
Query: 43 GKEGADRYRVHNLP-STSGPGVYELGIV------ASRSR-TDRIDSDDVVVVYLGQADSV 94
GK DRYRV NLP S SGPGVYE+G+ + RS + + DVVVVYLG AD+V
Sbjct: 78 GKI-PDRYRVSNLPGSNSGPGVYEIGVTPPAWLPSQRSNHSGSLKPQDVVVVYLGCADNV 136
Query: 95 RTRLQCYGRSGAHL 108
L YG++GAHL
Sbjct: 137 NYHLHRYGQTGAHL 150
>gi|168045292|ref|XP_001775112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673563|gb|EDQ60084.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 610
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 10 RIKREECKRTKHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPST-SGPGVYELGI 68
R+KRE KHD FS WK+LVG +DW D+ GK R+R NL S SG G++ELG+
Sbjct: 31 RLKRENHTHVKHDECFSDWKVLVGPTDWKDHASGKI-PGRFRTSNLSSNYSGAGIFELGV 89
Query: 69 V------ASRSR-TDRIDSDDVVVVYLGQADSVRTRLQCYGRSGAHL 108
RS + + DVVVVYLG A++V L G++GAHL
Sbjct: 90 TPPAWLPPQRSNYSGFLKPQDVVVVYLGCAENVYQHLFRIGQTGAHL 136
>gi|302823750|ref|XP_002993524.1| hypothetical protein SELMODRAFT_431583 [Selaginella moellendorffii]
gi|300138655|gb|EFJ05416.1| hypothetical protein SELMODRAFT_431583 [Selaginella moellendorffii]
Length = 532
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 24/113 (21%)
Query: 49 RYRVHNLPSTSG--PGVYELGIV------ASRSRTDRIDSDDVVVVYLGQADSVRTRLQC 100
RYR+HNLPS S PG+YELGIV R + R+ DVV VYLGQA++VR RLQ
Sbjct: 239 RYRLHNLPSKSAVRPGIYELGIVRPCSSSRKRKKKKRLHRRDVVAVYLGQAENVRQRLQS 298
Query: 101 YGRSGAHLNNNPS----------------NGSGCFDDIFSRRHAIAYRRAPVG 137
YG+ G+HL G F +IF+R +++A+R + G
Sbjct: 299 YGQGGSHLEGWTGLEKWLPEKRVLTQIFRQGPRLFSEIFARGYSLAFRWSATG 351
>gi|297803480|ref|XP_002869624.1| hypothetical protein ARALYDRAFT_913945 [Arabidopsis lyrata subsp.
lyrata]
gi|297315460|gb|EFH45883.1| hypothetical protein ARALYDRAFT_913945 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 13/81 (16%)
Query: 29 KILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIVASRSRTDRIDSDDVVVVYL 88
KIL+GASD ++ GK+ RYRV + PG++ELG D DDV+V L
Sbjct: 55 KILIGASDKENFRKGKDRVGRYRVQG----AFPGLFELG-------HDHGRKDDVLVANL 103
Query: 89 GQA--DSVRTRLQCYGRSGAH 107
GQA +S+R+RL+ Y RS AH
Sbjct: 104 GQAESESIRSRLRSYTRSFAH 124
>gi|162447013|ref|YP_001620145.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
gi|187629784|sp|A9NEI9.1|SYC_ACHLI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|161985120|gb|ABX80769.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
Length = 434
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 20 KHDAHFSKWKILVGASDWADYLLGKEGADRYRVHNLPSTSGPGVYELGIVASRSRTDRID 79
KHD H +K+ + VG D A+ + K + ++ +L P Y L ++A R
Sbjct: 243 KHDHHLAKYWMHVGRLDLANEKMSKSLGNDIKLKDLVQVYNPNAYRLMLLAHHYRAPIQF 302
Query: 80 SDDVVVVYLGQADSVRTRLQCYGRSGAHLNNNPSNG 115
SDD++ Y D + L + LNN NG
Sbjct: 303 SDDLIEQYQKAYDKISYTLNKW-HFHMILNNINENG 337
>gi|402773793|ref|YP_006593330.1| UvrABC system protein C [Methylocystis sp. SC2]
gi|401775813|emb|CCJ08679.1| UvrABC system protein C [Methylocystis sp. SC2]
Length = 661
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 44 KEGADRYRVHNLPSTSGPGVYELGIVASRSRTDRIDSDDVVVVYLGQADSVRTRLQCYGR 103
K G D + H + +GPGVY R+ +++ V+Y+G+A +VR R+ Y R
Sbjct: 46 KRGVDVIKKHWRHAPNGPGVY------------RMIAENGEVLYVGKAKNVRKRVASYTR 93
Query: 104 SGAHLN 109
H+N
Sbjct: 94 LAGHVN 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,489,104,620
Number of Sequences: 23463169
Number of extensions: 102504634
Number of successful extensions: 168346
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 168238
Number of HSP's gapped (non-prelim): 42
length of query: 144
length of database: 8,064,228,071
effective HSP length: 108
effective length of query: 36
effective length of database: 9,825,173,115
effective search space: 353706232140
effective search space used: 353706232140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)