Query         041858
Match_columns 528
No_of_seqs    205 out of 1935
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 11:25:37 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041858.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041858hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02169 fatty acid (omega-1)- 100.0 2.9E-80 6.3E-85  611.1  49.0  492    1-519     1-499 (500)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0 2.8E-80   6E-85  593.1  43.8  457   38-520    23-488 (489)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 5.8E-80 1.3E-84  580.8  41.4  457   36-520    27-499 (499)
  4 KOG0157 Cytochrome P450 CYP4/C 100.0 1.6E-78 3.5E-83  594.4  48.6  461   40-520    34-496 (497)
  5 PLN03195 fatty acid omega-hydr 100.0 3.5E-77 7.7E-82  595.5  48.0  469   42-520    31-516 (516)
  6 PLN02971 tryptophan N-hydroxyl 100.0 7.3E-76 1.6E-80  586.5  48.1  461   41-520    57-534 (543)
  7 PLN02290 cytokinin trans-hydro 100.0 2.9E-75 6.2E-80  582.3  47.9  455   39-521    40-516 (516)
  8 PLN02500 cytochrome P450 90B1  100.0 1.6E-74 3.5E-79  572.6  43.1  444   39-518    36-488 (490)
  9 PLN00168 Cytochrome P450; Prov 100.0 6.4E-74 1.4E-78  571.3  46.7  458   40-521    34-518 (519)
 10 PTZ00404 cytochrome P450; Prov 100.0 9.3E-75   2E-79  574.2  40.4  447   43-519    31-482 (482)
 11 PLN03234 cytochrome P450 83B1; 100.0 2.6E-74 5.6E-79  573.5  43.1  459   38-519    25-498 (499)
 12 PLN02426 cytochrome P450, fami 100.0 7.6E-73 1.6E-77  557.3  50.9  448   48-521    48-501 (502)
 13 PLN00110 flavonoid 3',5'-hydro 100.0 1.3E-73 2.9E-78  565.0  44.0  461   38-522    28-499 (504)
 14 PLN02687 flavonoid 3'-monooxyg 100.0 1.1E-73 2.3E-78  569.4  43.4  456   42-520    35-509 (517)
 15 PLN02183 ferulate 5-hydroxylas 100.0 4.7E-73   1E-77  564.7  42.9  450   37-519    32-511 (516)
 16 PLN02394 trans-cinnamate 4-mon 100.0 2.2E-72 4.8E-77  560.3  46.1  462   38-520    27-502 (503)
 17 PLN03112 cytochrome P450 famil 100.0 1.2E-72 2.6E-77  563.1  43.1  458   43-523    34-511 (514)
 18 PLN02966 cytochrome P450 83A1  100.0 1.2E-72 2.6E-77  560.4  42.6  437   38-496    26-471 (502)
 19 PLN02774 brassinosteroid-6-oxi 100.0   3E-72 6.6E-77  551.7  42.3  437   35-518    25-462 (463)
 20 KOG0159 Cytochrome P450 CYP11/ 100.0 8.1E-72 1.7E-76  512.4  41.5  452   44-520    53-518 (519)
 21 PLN02936 epsilon-ring hydroxyl 100.0 1.3E-71 2.8E-76  550.0  45.9  458   45-525    16-487 (489)
 22 PLN02655 ent-kaurene oxidase   100.0   4E-71 8.6E-76  544.3  45.0  451   43-521     1-465 (466)
 23 PF00067 p450:  Cytochrome P450 100.0 9.7E-73 2.1E-77  563.1  33.4  454   43-516     1-463 (463)
 24 PLN03018 homomethionine N-hydr 100.0 2.1E-70 4.6E-75  542.7  47.8  463   41-520    40-524 (534)
 25 PLN02738 carotene beta-ring hy 100.0 1.5E-70 3.2E-75  549.1  44.4  443   52-521   142-596 (633)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 3.8E-70 8.3E-75  535.7  41.6  442   39-521     5-451 (452)
 27 PLN02196 abscisic acid 8'-hydr 100.0 4.6E-70   1E-74  535.7  41.7  427   41-519    35-462 (463)
 28 PLN02987 Cytochrome P450, fami 100.0 2.9E-68 6.3E-73  520.7  44.6  437   42-521    31-470 (472)
 29 PLN02302 ent-kaurenoic acid ox 100.0 6.9E-68 1.5E-72  528.0  45.7  441   41-521    42-489 (490)
 30 KOG0684 Cytochrome P450 [Secon 100.0 1.5E-67 3.3E-72  471.6  36.2  437   48-520    39-485 (486)
 31 PLN02648 allene oxide synthase 100.0   1E-59 2.2E-64  456.4  29.4  406   42-497    18-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.6E-53 3.5E-58  408.7  30.1  380   66-519    25-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  58.4      34 0.00074   21.4   4.4   42  307-348     6-47  (48)
 34 PF05393 Hum_adeno_E3A:  Human   55.2       9 0.00019   27.0   1.7    9   45-53     63-71  (94)
 35 PF05952 ComX:  Bacillus compet  54.7      13 0.00028   24.1   2.2   21  330-350     5-25  (57)
 36 PF15202 Adipogenin:  Adipogeni  52.1      35 0.00075   22.6   3.9   23    4-26     10-32  (81)
 37 PF06716 DUF1201:  Protein of u  51.9      52  0.0011   19.9   4.7   18    6-23      4-21  (54)
 38 TIGR02976 phageshock_pspB phag  44.8      50  0.0011   23.0   4.1   29   13-41      3-31  (75)
 39 COG4459 NapE Periplasmic nitra  43.9      86  0.0019   20.2   4.6    9   40-48     53-61  (62)
 40 PF09201 SRX:  SRX;  InterPro:   40.2      23  0.0005   27.7   2.0   23  464-486    17-39  (148)
 41 PF12508 DUF3714:  Protein of u  36.3      12 0.00026   31.9   0.0   44  374-419    51-94  (200)
 42 PF15300 INT_SG_DDX_CT_C:  INTS  34.4      27 0.00058   23.5   1.4   16  374-389    39-54  (65)
 43 PHA02902 putative IMV membrane  34.3 1.1E+02  0.0023   20.3   4.0   21   30-50     18-39  (70)
 44 KOG3653 Transforming growth fa  33.0 1.1E+02  0.0025   29.9   5.8    8   75-82    222-229 (534)
 45 PF08693 SKG6:  Transmembrane a  31.5      27 0.00058   20.8   0.9   14   23-36     23-36  (40)
 46 KOG3506 40S ribosomal protein   31.4      22 0.00049   22.5   0.6    9  459-467    13-21  (56)
 47 PF15330 SIT:  SHP2-interacting  30.1   1E+02  0.0023   23.3   4.1   10   49-58     46-55  (107)
 48 PF10915 DUF2709:  Protein of u  29.5 2.2E+02  0.0047   23.9   6.0   57   49-108    90-147 (238)
 49 COG3295 Uncharacterized protei  29.4      90  0.0019   26.3   3.9   38   13-54    163-200 (213)
 50 PF01102 Glycophorin_A:  Glycop  28.6 1.1E+02  0.0023   23.9   4.0   25   11-35     65-89  (122)
 51 PF05568 ASFV_J13L:  African sw  28.0 1.1E+02  0.0024   24.1   4.0   16   27-42     41-56  (189)
 52 COG4818 Predicted membrane pro  27.6 1.4E+02   0.003   21.8   4.0    9   48-56     88-96  (105)
 53 PF08285 DPM3:  Dolichol-phosph  27.5      88  0.0019   22.8   3.2   30  323-352    52-81  (91)
 54 PF07234 DUF1426:  Protein of u  27.4 1.5E+02  0.0033   21.5   4.2   25    1-25      1-25  (117)
 55 PF15050 SCIMP:  SCIMP protein   25.6 1.4E+02  0.0029   22.8   3.9   24   18-41     11-34  (133)
 56 PF14129 DUF4296:  Domain of un  25.1 2.4E+02  0.0053   20.2   5.2   50  304-353    30-79  (87)
 57 PF05393 Hum_adeno_E3A:  Human   24.6 2.1E+02  0.0046   20.5   4.4   15   14-28     36-50  (94)
 58 PRK06789 flagellar motor switc  24.6      74  0.0016   22.1   2.3   40  381-420    21-62  (74)
 59 PHA02681 ORF089 virion membran  24.1 1.9E+02  0.0041   20.3   4.0   19   23-41     10-28  (92)
 60 PF07204 Orthoreo_P10:  Orthore  23.7      78  0.0017   22.9   2.3   16    5-20     33-48  (98)
 61 PF06667 PspB:  Phage shock pro  22.5 2.1E+02  0.0045   20.0   4.1   14   26-39     16-29  (75)
 62 PF03554 Herpes_UL73:  UL73 vir  22.3   2E+02  0.0043   20.5   4.0    9    7-15     45-53  (82)
 63 PF13625 Helicase_C_3:  Helicas  22.2 1.8E+02  0.0039   22.8   4.5   40   63-107    74-113 (129)
 64 PRK00400 hisE phosphoribosyl-A  21.9 3.6E+02  0.0077   20.4   5.8   77  266-352     8-92  (105)
 65 PF08780 NTase_sub_bind:  Nucle  21.5   4E+02  0.0086   20.8   6.3   38  119-157    63-103 (124)
 66 cd05024 S-100A10 S-100A10: A s  21.5   3E+02  0.0066   20.1   5.0   55  260-321    27-83  (91)
 67 PF07886 BA14K:  BA14K-like pro  21.4      69  0.0015   17.9   1.3   16  453-468    16-31  (31)
 68 PF14483 Cut8_M:  Cut8 dimerisa  21.3 1.5E+02  0.0033   17.4   2.8   12  335-346    24-35  (38)
 69 TIGR00847 ccoS cytochrome oxid  20.1 2.2E+02  0.0049   18.1   3.6   19   21-39     10-28  (51)

No 1  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.9e-80  Score=611.15  Aligned_cols=492  Identities=38%  Similarity=0.687  Sum_probs=385.2

Q ss_pred             CccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCee
Q 041858            1 MAMTRKLLFLVSDWFYAHICLWDIAAAASGLFILSCICQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTF   80 (528)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~   80 (528)
                      |||.+++-..+..-+.++       ....+.  .|-+++++.| ||+++|++||+..+.......++++.+...+||..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~p-~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (500)
T PLN02169          1 MAMLGLLEFFVAFIFFLV-------CLFTCF--FIHKKPHGQP-ILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTF   70 (500)
T ss_pred             CchHHHHHHHHHHHHHHH-------HHHHHH--HHHhccCCCC-CCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcE
Confidence            788877765443323211       111222  3444555555 999999999998876554456777777777899888


Q ss_pred             EEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhH-
Q 041858           81 YYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSL-  159 (528)
Q Consensus        81 ~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~-  159 (528)
                      .+.++|+|+.++++|+||+++++|+.++...|++...+... ....|+|+++++|+.|+++|+++++.|+..++..... 
T Consensus        71 ~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~-~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~  149 (500)
T PLN02169         71 YFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI-FDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLS  149 (500)
T ss_pred             EEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH-HHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            87777999999999999999999999887788887655433 3567899999999999999999999999887765322 


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCcc
Q 041858          160 QTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPF  239 (528)
Q Consensus       160 ~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  239 (528)
                      +.+.+. .+.+.+.+++....++++|+.+.+..+++|++++++||.+.+..+.......+.+.+.............|.+
T Consensus       150 ~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  228 (500)
T PLN02169        150 SNKSKL-KEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVI  228 (500)
T ss_pred             HHHHHH-HHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHH
Confidence            334333 6677777776555667899999999999999999999998765432222345665555544443333344422


Q ss_pred             ccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCCChhhHHHHHHhccccC----CCCChhhHHHHHHh
Q 041858          240 IWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRL-GSLIDQSDLLSRLMDTEEKN----GHLPDKYYRDFSVS  314 (528)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~----~~l~~~~i~~~~~~  314 (528)
                      .+.+..+++....++..++.+.+.+++.+.|+++++..... +.+....|+++.+++..+.+    ..++++++.+++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~  308 (500)
T PLN02169        229 LWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFS  308 (500)
T ss_pred             HHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHH
Confidence            22233344455667788899999999999999887653211 11112468999998764321    23788999999999


Q ss_pred             hheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcc
Q 041858          315 FILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPI  394 (528)
Q Consensus       315 ~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~  394 (528)
                      +++||+|||+++++|++|+|+.|||+|+|+++||+++               ++.+++.+||||+|||+||||++|++|+
T Consensus       309 ~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v---------------~~~~dl~~L~Yl~avi~EtLRl~P~vp~  373 (500)
T PLN02169        309 LVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK---------------FDNEDLEKLVYLHAALSESMRLYPPLPF  373 (500)
T ss_pred             HHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh---------------CCHHHHhcCHHHHHHHHHHHhcCCCCCc
Confidence            9999999999999999999999999999999999876               3678999999999999999999999999


Q ss_pred             cccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCc-cccCCccccccCCCCcccccHHHH
Q 041858          395 EMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQF-VSENQFKYAVFNAGPRLCLGKKFA  473 (528)
Q Consensus       395 ~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~-~~~~~~~~~~FG~G~r~C~G~~~A  473 (528)
                      ..|+++.++++++||.|||||.|++++|++||||++||+||++|+||||++++.. ....++.|+|||+|+|+|+|++||
T Consensus       374 ~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A  453 (500)
T PLN02169        374 NHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLA  453 (500)
T ss_pred             CceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHH
Confidence            9999988888889999999999999999999999999889999999999964221 112367899999999999999999


Q ss_pred             HHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEEc
Q 041858          474 YMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       474 ~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (528)
                      .+|+++++++|+++|++++.++.++......+++|++|+.|++++|
T Consensus       454 ~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        454 LLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             HHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEEeC
Confidence            9999999999999999999876555555567889999999999987


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.8e-80  Score=593.13  Aligned_cols=457  Identities=24%  Similarity=0.357  Sum_probs=361.9

Q ss_pred             hhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh
Q 041858           38 CQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN  117 (528)
Q Consensus        38 ~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~  117 (528)
                      ..++.||||++||+|||++++...  .++..+.++.++|||+|.+   |+|..++|||+|+++++|++.+++..|+.++.
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl---~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~   97 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTL---RLGSVPVVVISSYEAAKEVLVKQDLEFADRPD   97 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEE---EecCceEEEECCHHHHHHHHHhCCccccCCCC
Confidence            347778999999999999999654  5899999999999999999   99999999999999999999999889988876


Q ss_pred             hHHHHHhhh--cCceeec-CChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 041858          118 YRERFQDLL--GDGIFNA-DSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFT  194 (528)
Q Consensus       118 ~~~~~~~~~--g~~~~~~-~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  194 (528)
                      .......+.  +.+++++ +|+.|+.+||+....+-+.+..+.....-.++ .+.+.+.+.+ ...+++||+...+..++
T Consensus        98 ~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E-~~~l~~~l~~-~~~~~~vdl~~~l~~~~  175 (489)
T KOG0156|consen   98 PTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEE-VDELVKKLSK-SKKGEPVDLSELLDLLV  175 (489)
T ss_pred             chhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHH-HHHHHHHHHh-cCCCceeeHHHHHHHHH
Confidence            211222233  3577777 89999999999988765555444323333344 4555555554 22237899999999999


Q ss_pred             HHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccc-hhhhhcc--chHHHHHHHHHHHHHHHHHHHH
Q 041858          195 LDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWK-PMKLFGL--GYERRLKIAIQIVQDFADKIVS  271 (528)
Q Consensus       195 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~--~~~~~~~~~~~~l~~~~~~~i~  271 (528)
                      .++|++++||.+++..+++ ...++.+.+....+.........  +++ +.++++.  ...+.......++.+++++.|+
T Consensus       176 ~nvI~~~~fG~rf~~~~~~-~~~~~~~l~~~~~~~~~~~~~~d--~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~  252 (489)
T KOG0156|consen  176 GNVICRMLFGRRFEEEDEE-EFLELKELVEESLELLGSFNLSD--YFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIID  252 (489)
T ss_pred             HHHHHHHHhCCccccCCch-HHHHHHHHHHHHHHHhCCccHHH--HhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999865221 11235555555444433211111  111 2333331  3556666666679999999999


Q ss_pred             HHHHhhhhcCCCCChhhHHHHHHhccccC--CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 041858          272 DRRNKLTRLGSLIDQSDLLSRLMDTEEKN--GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEIN  349 (528)
Q Consensus       272 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~  349 (528)
                      ++++.. ..   +...|+++.+++..+++  +.+++++|...+.++++||+|||++|+.|++.+|++|||+|+|+++||+
T Consensus       253 eh~~~~-~~---~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId  328 (489)
T KOG0156|consen  253 EHREKI-GD---EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEID  328 (489)
T ss_pred             HHHhhh-cc---CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            998876 21   12289999999886543  2389999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCC
Q 041858          350 EILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMES  429 (528)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  429 (528)
                      +++|.+         +.++.+|+.+||||+|||+|++|++|++|+..+|.+..++.++||.|||||.|+++.|++||||+
T Consensus       329 ~vvG~~---------r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~  399 (489)
T KOG0156|consen  329 EVVGKG---------RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPK  399 (489)
T ss_pred             HHhCCC---------CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCc
Confidence            999865         35999999999999999999999999999998887777778899999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCC-CcccccceEEee
Q 041858          430 IWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDH-NVVPKVTTTLYV  508 (528)
Q Consensus       430 ~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~  508 (528)
                      +| +||++|+||||++.+.... ....++|||.|+|+|||..+|.+++.++++.|+++|+|+++++. +..... .++..
T Consensus       400 vw-~dP~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~~-~~~~~  476 (489)
T KOG0156|consen  400 VW-EDPEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEAG-LTLKK  476 (489)
T ss_pred             cC-CCccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCcccc-cceec
Confidence            99 9999999999998531222 66789999999999999999999999999999999999998761 223333 55666


Q ss_pred             cCcEEEEEEEcc
Q 041858          509 KNGLMVTLKPRL  520 (528)
Q Consensus       509 ~~~~~v~~~~r~  520 (528)
                      +.++.+...+|.
T Consensus       477 ~~pl~~~~~~r~  488 (489)
T KOG0156|consen  477 KKPLKAVPVPRL  488 (489)
T ss_pred             CCcceeeeecCC
Confidence            667777777764


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.8e-80  Score=580.80  Aligned_cols=457  Identities=26%  Similarity=0.423  Sum_probs=355.8

Q ss_pred             HhhhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCC-
Q 041858           36 CICQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPK-  114 (528)
Q Consensus        36 ~~~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~-  114 (528)
                      |++++..| ||+++|++||+..+.+.... ..+..+.+.++|+++-+   +.+.+|.++|+|||.|++|+.+++++|.. 
T Consensus        27 yw~rrGi~-~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~---y~~~~p~l~v~D~elik~I~ik~F~~F~~r  101 (499)
T KOG0158|consen   27 YWRRRGIP-GPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGI---YEGRQPALLVSDPELIKEILIKDFDNFYNR  101 (499)
T ss_pred             hhccCCCC-CCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEE---EecCCcceEecCHHHHHHHHHHhCccCcCC
Confidence            45555555 99999999999999775433 44555555555998888   89999999999999999999999999988 


Q ss_pred             -ChhhHHHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHH
Q 041858          115 -GKNYRERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRF  193 (528)
Q Consensus       115 -~~~~~~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  193 (528)
                       ++.+.+.-..+...++|+.+|++||++|..++|.|++.+++.+ .+.+++. .+++.+.+++....++.+++.+.+.++
T Consensus       102 ~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m-~~t~~~~-~~~l~~~l~~~~~~~~~~~~~dl~~~y  179 (499)
T KOG0158|consen  102 KRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKM-FPTMEEV-GDELVRHLRRKSEGGQEGEIKDLCARY  179 (499)
T ss_pred             CCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHH-HHHHHHH-HHHHHHHHHHhhcccCCccHHHHHHHH
Confidence             4333322212233689999999999999999999999999999 6888777 888999998854444578999999999


Q ss_pred             HHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHH-HH-Hhh-cCCccccch-hhhhccchHHHHHHHHHHHHHHHHHH
Q 041858          194 TLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATEL-SL-FRF-LLPPFIWKP-MKLFGLGYERRLKIAIQIVQDFADKI  269 (528)
Q Consensus       194 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~~p~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~  269 (528)
                      +.|||++++||.+.++..+  ....+.......... .. ... ....+.++. ...+  ..........+.+.+.+...
T Consensus       180 T~DVI~~~AfG~~~~s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~  255 (499)
T KOG0158|consen  180 TTDVIGSCAFGLDANSLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSR  255 (499)
T ss_pred             HHHHHhHhhcccchhhhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHH
Confidence            9999999999999887764  233444332222222 11 000 000000111 1110  11112233444555555555


Q ss_pred             HHHHHHhhhhcCCCCChhhHHHHHHhcccc---C----CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHH
Q 041858          270 VSDRRNKLTRLGSLIDQSDLLSRLMDTEEK---N----GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVET  342 (528)
Q Consensus       270 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~  342 (528)
                      ++.|..+      +..+.|+++.+++...+   +    ..+|.++|+++|+.|++||.||||+++++++|+||+|||+|+
T Consensus       256 v~~R~~~------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~  329 (499)
T KOG0158|consen  256 VEQREKE------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQD  329 (499)
T ss_pred             HHHHHhc------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHH
Confidence            5555222      24688999999998743   1    249999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEecc
Q 041858          343 KIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTY  422 (528)
Q Consensus       343 ~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~  422 (528)
                      |||+||+++..+..         .+|+|.+.+|+||++||+||||+||+++...|+++++..+.+|+.||||+.|+++++
T Consensus       330 kLreEI~~~~~~~~---------~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~  400 (499)
T KOG0158|consen  330 KLREEIDEVLEEKE---------GLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTY  400 (499)
T ss_pred             HHHHHHHHHhcccC---------CCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecc
Confidence            99999999976542         299999999999999999999999999998888888766633999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCccccc
Q 041858          423 SMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKV  502 (528)
Q Consensus       423 ~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  502 (528)
                      ++||||++| |||++|+||||.+++.. ..++..|+|||.|+|+|+|++||++|+|+.|++||++|+++..+........
T Consensus       401 alH~Dp~~~-p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~  478 (499)
T KOG0158|consen  401 ALHHDPEYW-PEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEG  478 (499)
T ss_pred             cccCCcccC-CCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccC
Confidence            999999999 99999999999976322 5677899999999999999999999999999999999999998733222222


Q ss_pred             ---ceEEeecCcEEEEEEEcc
Q 041858          503 ---TTTLYVKNGLMVTLKPRL  520 (528)
Q Consensus       503 ---~~~~~~~~~~~v~~~~r~  520 (528)
                         +.++.|++|+.+++++|+
T Consensus       479 ~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  479 DPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             CccceeeecCCceEEEEEeCC
Confidence               567899999999999985


No 4  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.6e-78  Score=594.43  Aligned_cols=461  Identities=38%  Similarity=0.634  Sum_probs=383.2

Q ss_pred             hcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhH
Q 041858           40 KLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYR  119 (528)
Q Consensus        40 ~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~  119 (528)
                      ...||||+++|++|++.++.....++..++.++..+||++|+.   |+|+.+.|+++||+.+++|+.++.....+.+.+.
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~  110 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKT---WLGGKPTVVTTDPELIEEILKSSNENYPKGPDYP  110 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhh---hhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHH
Confidence            4456899999999999999654346788999999999999998   9999999999999999999987667788999999


Q ss_pred             HHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHH
Q 041858          120 ERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSIC  199 (528)
Q Consensus       120 ~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  199 (528)
                      ..+..++|.|+++++|+.|+++||++++.|+.+.++.+. ..+.+. ...+...++.. ..++.+|+++.++++++|+++
T Consensus       111 ~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~-~~~~~~-~~~~~~~~~~~-~~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  111 ESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFV-PVFIES-SLILLLLLELA-ASGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHH-HHHHHH-HHHHHHHHHHh-hcCCeEcHHHHHHHHHHHHHH
Confidence            889899999999999999999999999999999999994 445444 33434444432 333349999999999999999


Q ss_pred             HHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 041858          200 TAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTR  279 (528)
Q Consensus       200 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  279 (528)
                      .++||.... ........++.+++.........+...|.   ....+......++..++.+.+.+++++.|++++++...
T Consensus       188 ~~~~G~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~  263 (497)
T KOG0157|consen  188 KTAMGPESL-DAEGPELFEYVQAFDDLTELISKRINLPL---GTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEK  263 (497)
T ss_pred             HHhcCCccc-cccCCcccHHHHHHHHHHHHHHHHHcCch---hhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999992221 11122345788888888888888877773   11112222367888999999999999999999987665


Q ss_pred             cCCC--CChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccccc
Q 041858          280 LGSL--IDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKG  357 (528)
Q Consensus       280 ~~~~--~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  357 (528)
                      .+.+  ....|+++.+....+  ..+++++|++++.+|++||+|||+++++|++++|+.||++|+|+++|+++++++.+ 
T Consensus       264 ~~~~~~~~~~d~L~~~~~~~~--~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~-  340 (497)
T KOG0157|consen  264 EGSGEEKKRLDFLDTLLLEED--KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRD-  340 (497)
T ss_pred             cCCcccchhhhHHHHHHHhcc--CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCC-
Confidence            4322  346788886443333  44999999999999999999999999999999999999999999999999997543 


Q ss_pred             ccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCC
Q 041858          358 IIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLE  437 (528)
Q Consensus       358 ~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~  437 (528)
                             ...+..+.++|+||++||+|||||+||+|+..|++.+|+.+.+||.||||+.|+++++++|||+++||+||++
T Consensus       341 -------~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~  413 (497)
T KOG0157|consen  341 -------DKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEE  413 (497)
T ss_pred             -------CCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhh
Confidence                   1223333347999999999999999999999999999988877999999999999999999999999779999


Q ss_pred             cCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEE
Q 041858          438 FKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       438 F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  517 (528)
                      ||||||++++.....++++|+|||+|+|.|+|++||++|+|+++++++++|+|++..+..+.+....+++|.+|++|+++
T Consensus       414 F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~  493 (497)
T KOG0157|consen  414 FDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLR  493 (497)
T ss_pred             cCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEE
Confidence            99999997633335567899999999999999999999999999999999999998876566777889999999999999


Q ss_pred             Ecc
Q 041858          518 PRL  520 (528)
Q Consensus       518 ~r~  520 (528)
                      +|.
T Consensus       494 ~r~  496 (497)
T KOG0157|consen  494 PRG  496 (497)
T ss_pred             eCC
Confidence            996


No 5  
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.5e-77  Score=595.49  Aligned_cols=469  Identities=38%  Similarity=0.656  Sum_probs=362.7

Q ss_pred             ccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHc---CCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhh
Q 041858           42 TNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKT---GGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNY  118 (528)
Q Consensus        42 ~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~  118 (528)
                      .+|||+++|++||++.+..+    +..+.+|.++|   |++|.+   ++++.+.++++||+++++|+.++...|.+...+
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~  103 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN----YDRMHDWLVEYLSKDRTVVV---KMPFTTYTYIADPVNVEHVLKTNFANYPKGEVY  103 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc----cchHHHHHHHHhccCCcEEE---eeCCCCceEecCHHHHHHHHhhCccccCCcHhH
Confidence            35799999999999876543    22344555555   789988   889999999999999999998765678887666


Q ss_pred             HHHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH
Q 041858          119 RERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSI  198 (528)
Q Consensus       119 ~~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  198 (528)
                      ......+.|.++++.+|+.|+++|+++++.|+.+++..+ .+.+.+...+.+.+.+++....++++|+.+.++.+++|++
T Consensus       104 ~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi  182 (516)
T PLN03195        104 HSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDF-STVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSI  182 (516)
T ss_pred             HHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHH
Confidence            555555678889999999999999999999999998887 5655344366777777654445678999999999999999


Q ss_pred             HHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 041858          199 CTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLT  278 (528)
Q Consensus       199 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  278 (528)
                      ++++||.+++..+.+.....+.+.+.............|  .+...++++....+...+..+.+.+++.+.++++++...
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (516)
T PLN03195        183 CKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDP--LWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMD  260 (516)
T ss_pred             HHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcc--hhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999988765433223345555544333222222222  111222222222344456777888889888888876543


Q ss_pred             hcC--CCCChhhHHHHHHhcccc-CCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccc
Q 041858          279 RLG--SLIDQSDLLSRLMDTEEK-NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHK  355 (528)
Q Consensus       279 ~~~--~~~~~~d~l~~ll~~~~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  355 (528)
                      ...  ......|+++.+++..++ +..++++++++++..+++||+|||+++++|++|+|++|||+|+||++|+++++++.
T Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        261 EARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence            211  112356899999976543 24599999999999999999999999999999999999999999999999987532


Q ss_pred             c----ccc-------ccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEecccc
Q 041858          356 K----GII-------QLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSM  424 (528)
Q Consensus       356 ~----~~~-------~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~  424 (528)
                      .    ...       ..+.+..++++++.+||||+|||+||||++|+++...|++.+++++++||.|||||.|.++.+++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~  420 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSM  420 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhh
Confidence            0    000       00012458999999999999999999999999999998888887777999999999999999999


Q ss_pred             ccCCCCCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccce
Q 041858          425 ARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTT  504 (528)
Q Consensus       425 ~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  504 (528)
                      ||||++||+||++|+||||++++......+..|+|||+|+|+|+|++||++|++++++.|+++|++++.++.+.......
T Consensus       421 h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  500 (516)
T PLN03195        421 GRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMT  500 (516)
T ss_pred             ccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeee
Confidence            99999999999999999999642212234567999999999999999999999999999999999999766555454456


Q ss_pred             EEeecCcEEEEEEEcc
Q 041858          505 TLYVKNGLMVTLKPRL  520 (528)
Q Consensus       505 ~~~~~~~~~v~~~~r~  520 (528)
                      ++.|.+++.|++++|.
T Consensus       501 ~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        501 ILSMANGLKVTVSRRS  516 (516)
T ss_pred             EEecCCCEEEEEEeCC
Confidence            6789999999999874


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=7.3e-76  Score=586.54  Aligned_cols=461  Identities=19%  Similarity=0.308  Sum_probs=347.8

Q ss_pred             cccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcC-CeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhH
Q 041858           41 LTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTG-GTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYR  119 (528)
Q Consensus        41 ~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~  119 (528)
                      ..||||+++|++||++.+..+ ...+.++.+++++|| ++|.+   ++|+.++|+++||+++++++.+++..|.+++...
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~---~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACV---RLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEE---EcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            356899999999999888543 224678899999999 79988   8999999999999999999998777787776422


Q ss_pred             HHHHhhhcCc----eeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 041858          120 ERFQDLLGDG----IFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTL  195 (528)
Q Consensus       120 ~~~~~~~g~~----~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  195 (528)
                        ....++.+    ++..+|+.|+++|+++++.+..........+.++++ .+.+.+++.+....++++|+.+.++.+++
T Consensus       133 --~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  209 (543)
T PLN02971        133 --AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEE-TDHLTAWLYNMVKNSEPVDLRFVTRHYCG  209 (543)
T ss_pred             --chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCceehHHHHHHHHH
Confidence              22333433    777899999999999987655444443335555554 77777777665445667999999999999


Q ss_pred             HHHHHHHhCCCCCCCcC---CCCCchHHHHHHHHHHHHHHhhc-CCccccchhhhhcc-chHHHHHHHHHHHHHHHHHHH
Q 041858          196 DSICTAALGVDPGCLAI---DLPEVPFAKAFEEATELSLFRFL-LPPFIWKPMKLFGL-GYERRLKIAIQIVQDFADKIV  270 (528)
Q Consensus       196 ~vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i  270 (528)
                      +++++++||.++.....   +....+..+.+............ .....++.+++++. ...+...+..+.+.+++.+.+
T Consensus       210 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        210 NAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            99999999988743211   11111222333333322111110 01111222222221 233445556777888888888


Q ss_pred             HHHHHhhhhcCCCCChhhHHHHHHhccccC--CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHH
Q 041858          271 SDRRNKLTRLGSLIDQSDLLSRLMDTEEKN--GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEI  348 (528)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei  348 (528)
                      +++++..+.++ .....|+++.+++..+++  ..++++++.+++.++++||+|||+++++|++++|+.|||+|+|+++||
T Consensus       290 ~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI  368 (543)
T PLN02971        290 DERIKMWREGK-RTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEI  368 (543)
T ss_pred             HHHHHHHhccC-CCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            88766433211 112469999999865432  248999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCC
Q 041858          349 NEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARME  428 (528)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~  428 (528)
                      +++++.+         +.++++++.+|||++|||+|+||++|++|+..+|.+.+++.++||.|||||.|+++.+++||||
T Consensus       369 ~~v~g~~---------~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~  439 (543)
T PLN02971        369 DRVVGKE---------RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNP  439 (543)
T ss_pred             HHHhCCC---------CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCCh
Confidence            9998643         4689999999999999999999999999987767666666679999999999999999999999


Q ss_pred             CCCCCCCCCcCCCCcCCCCCc--cccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC-c--ccccc
Q 041858          429 SIWGKDCLEFKPERWIKDGQF--VSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN-V--VPKVT  503 (528)
Q Consensus       429 ~~~g~~p~~F~P~Rf~~~~~~--~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~--~~~~~  503 (528)
                      ++| +||++|+||||++++..  ....+..|+|||+|+|.|+|++||+.|+++++++|+++|+|++.++.. .  ....+
T Consensus       440 ~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  518 (543)
T PLN02971        440 KVW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH  518 (543)
T ss_pred             hhC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC
Confidence            999 99999999999964211  123456799999999999999999999999999999999999876442 2  22333


Q ss_pred             eEEeecCcEEEEEEEcc
Q 041858          504 TTLYVKNGLMVTLKPRL  520 (528)
Q Consensus       504 ~~~~~~~~~~v~~~~r~  520 (528)
                       ++..++++.|.+++|.
T Consensus       519 -~~~~~~~~~~~~~~~~  534 (543)
T PLN02971        519 -DMFLSKPLVMVGELRL  534 (543)
T ss_pred             -cccccccceeeeeecC
Confidence             5544567999999993


No 7  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.9e-75  Score=582.31  Aligned_cols=455  Identities=24%  Similarity=0.365  Sum_probs=353.5

Q ss_pred             hhcccCCCCCCccccchhhhhhhh----------------hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHH
Q 041858           39 QKLTNRGPMLWPVLGVLPSMFLHL----------------NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIE  102 (528)
Q Consensus        39 ~~~~pPGP~~~P~iG~~~~~~~~~----------------~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~  102 (528)
                      .+..||||+++|++||++.+....                .+....+.+|+++||++|.+   |+|+.++|+++||++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~v~  116 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIY---WNGTEPRLCLTETELIK  116 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEE---ccCCccEEEECCHHHHH
Confidence            344568999999999998875321                11223567899999999988   89999999999999999


Q ss_pred             HHHhcCCCCCCCChhhH-HHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 041858          103 YMVKTNFSNFPKGKNYR-ERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSG  181 (528)
Q Consensus       103 ~il~~~~~~f~~~~~~~-~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~  181 (528)
                      +|+.++ ..+..++... .......|.+++.++|+.|+++|+++++.|+..++..+ .+.+.++ .+.+.+.+.+....+
T Consensus       117 ~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~~  193 (516)
T PLN02290        117 ELLTKY-NTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGY-AGHMVEC-TKQMLQSLQKAVESG  193 (516)
T ss_pred             HHHhcC-CCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHH-HHHHHHH-HHHHHHHHHHHHhcC
Confidence            999876 3343333221 12234567889999999999999999999999999888 6778777 566666676543333


Q ss_pred             -CcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHH
Q 041858          182 -DRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQ  260 (528)
Q Consensus       182 -~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  260 (528)
                       +++|+.+.++.+++|++++++||.+++..      .++.+.+............ . ..++..++++....+...+..+
T Consensus       194 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~-~-~~~p~~~~~p~~~~~~~~~~~~  265 (516)
T PLN02290        194 QTEVEIGEYMTRLTADIISRTEFDSSYEKG------KQIFHLLTVLQRLCAQATR-H-LCFPGSRFFPSKYNREIKSLKG  265 (516)
T ss_pred             CceEEhHHHHHHHHHHHHHHHHcCCccccc------hHHHHHHHHHHHHHHHhhh-h-hcCchhhhCCChhHHHHHHHHH
Confidence             47999999999999999999999886521      2233333333222111110 0 0112233444344455666778


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhcccc----CCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhh
Q 041858          261 IVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEK----NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHK  336 (528)
Q Consensus       261 ~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  336 (528)
                      .+.+++.+.++++++..+.+..+....|+++.+++..++    +..++++++.+++.++++||+|||+++++|++++|++
T Consensus       266 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~  345 (516)
T PLN02290        266 EVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLAS  345 (516)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            888999999988876543321122357999999976432    1247899999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCE
Q 041858          337 NLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGAR  416 (528)
Q Consensus       337 ~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~  416 (528)
                      ||++|+|+++|++++++.          ..++++++++||||+|||+||||++|+++...|++. +++.++||.|||||.
T Consensus       346 ~P~vq~kl~~Ei~~v~~~----------~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~-~d~~i~g~~IP~Gt~  414 (516)
T PLN02290        346 NPTWQDKVRAEVAEVCGG----------ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAF-EDIKLGDLHIPKGLS  414 (516)
T ss_pred             CHHHHHHHHHHHHHHhCC----------CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeec-CCeeECCEEECCCCE
Confidence            999999999999999864          257999999999999999999999999997655555 455569999999999


Q ss_pred             EEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCC
Q 041858          417 VLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDH  496 (528)
Q Consensus       417 v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  496 (528)
                      |+++.+++||||++||+||++|+||||+++.   ......|+|||.|+|.|+|+++|++|+++++++|+++|++++.++.
T Consensus       415 V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~  491 (516)
T PLN02290        415 IWIPVLAIHHSEELWGKDANEFNPDRFAGRP---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY  491 (516)
T ss_pred             EEecHHHhcCChhhhCCChhhcCccccCCCC---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc
Confidence            9999999999999997799999999999531   1233569999999999999999999999999999999999997764


Q ss_pred             CcccccceEEeecCcEEEEEEEccc
Q 041858          497 NVVPKVTTTLYVKNGLMVTLKPRLD  521 (528)
Q Consensus       497 ~~~~~~~~~~~~~~~~~v~~~~r~~  521 (528)
                      ........++.|.++++|++++|++
T Consensus       492 ~~~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        492 RHAPVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             ccCccceeeecCCCCCeEEEEeCCC
Confidence            3333445788999999999999974


No 8  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.6e-74  Score=572.58  Aligned_cols=444  Identities=20%  Similarity=0.305  Sum_probs=334.8

Q ss_pred             hhcccCCCCCCccccchhhhhhhh--hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCCh
Q 041858           39 QKLTNRGPMLWPVLGVLPSMFLHL--NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGK  116 (528)
Q Consensus        39 ~~~~pPGP~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~  116 (528)
                      ..+.||||+++|++||++.+....  ..++.++.+++++||++|.+   ++|++++|+++||+++++|+.+++..|.++.
T Consensus        36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRS---NLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccc---cccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            345578999999999987654321  34678899999999999988   8899999999999999999987755564331


Q ss_pred             hhHHHHHhhhc-CceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 041858          117 NYRERFQDLLG-DGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTL  195 (528)
Q Consensus       117 ~~~~~~~~~~g-~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  195 (528)
                      .  ......+| .+++..+|+.|+++|+++++.|+..++..+..+.+.+.    ....++.+ ..++++|+.+.++.+++
T Consensus       113 ~--~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~----~~~~~~~~-~~~~~vd~~~~~~~~~~  185 (490)
T PLN02500        113 P--RSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERH----TLLVLDSW-KENSTFSAQDEAKKFTF  185 (490)
T ss_pred             c--hHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHH----HHHHHHHh-CCCCCEEehHHHHHHHH
Confidence            1  11223445 47888899999999999999999988876434444433    22233333 23456999999999999


Q ss_pred             HHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041858          196 DSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRN  275 (528)
Q Consensus       196 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  275 (528)
                      |++++++||.+.+..+    ...+.+.+.......   ...+       ..++....++..++.+.+.+++.+.++++++
T Consensus       186 ~vi~~~~fg~~~~~~~----~~~~~~~~~~~~~~~---~~~~-------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~  251 (490)
T PLN02500        186 NLMAKHIMSMDPGEEE----TEQLKKEYVTFMKGV---VSAP-------LNFPGTAYRKALKSRATILKFIERKMEERIE  251 (490)
T ss_pred             HHHHHHHhCCCCCchH----HHHHHHHHHHHHhhh---hcch-------hcCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998753211    112222222222211   0111       0112122344556778888889999988776


Q ss_pred             hhhhcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccc
Q 041858          276 KLTRLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHK  355 (528)
Q Consensus       276 ~~~~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  355 (528)
                      ....++......|+++.+++..    .++++++++++..+++||+|||+++++|++++|++|||+|+|+++|++++.+..
T Consensus       252 ~~~~~~~~~~~~d~l~~ll~~~----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~  327 (490)
T PLN02500        252 KLKEEDESVEEDDLLGWVLKHS----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAK  327 (490)
T ss_pred             hhhcccCCCCcchHHHHHHhcc----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc
Confidence            5433221123469999999753    289999999999999999999999999999999999999999999999987421


Q ss_pred             ccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCC
Q 041858          356 KGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDC  435 (528)
Q Consensus       356 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p  435 (528)
                      .    ...+..++++++++|||++|||+||||++|+++...|++.+ ++.++||.|||||.|+++.+++||||++| +||
T Consensus       328 ~----~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~-d~~~~G~~IPkGt~V~~~~~~~hrdp~~~-~dP  401 (490)
T PLN02500        328 K----QSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALK-DVRYKGYDIPSGWKVLPVIAAVHLDSSLY-DQP  401 (490)
T ss_pred             c----cCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCC-CceeCCEEECCCCEEEechhhcccCcccC-CCc
Confidence            0    00123589999999999999999999999999987665655 55569999999999999999999999999 999


Q ss_pred             CCcCCCCcCCCCCcc------ccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeec
Q 041858          436 LEFKPERWIKDGQFV------SENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVK  509 (528)
Q Consensus       436 ~~F~P~Rf~~~~~~~------~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  509 (528)
                      ++|+||||++++...      ...+..|+|||+|+|.|+|+++|..|+++++++|+++|+|++.++......  ....++
T Consensus       402 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~--~~~~~~  479 (490)
T PLN02500        402 QLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAF--PFVDFP  479 (490)
T ss_pred             cccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceec--ccccCC
Confidence            999999999642111      124568999999999999999999999999999999999999776543222  233556


Q ss_pred             CcEEEEEEE
Q 041858          510 NGLMVTLKP  518 (528)
Q Consensus       510 ~~~~v~~~~  518 (528)
                      ++++|++++
T Consensus       480 ~~l~~~~~~  488 (490)
T PLN02500        480 KGLPIRVRR  488 (490)
T ss_pred             CCceEEEEe
Confidence            899999876


No 9  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=6.4e-74  Score=571.31  Aligned_cols=458  Identities=20%  Similarity=0.256  Sum_probs=349.9

Q ss_pred             hcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhH
Q 041858           40 KLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYR  119 (528)
Q Consensus        40 ~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~  119 (528)
                      .+.||||+++|++||+..+.....+++..+.+++++||++|.+   ++|+.++|+++||+++++++.++...|+.++...
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSL---RVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEE---EcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            3456899999999999866433244788999999999999999   8899999999999999999988767777665432


Q ss_pred             HHHHhhhc--Cceee--cCChhHHHHHH-hhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 041858          120 ERFQDLLG--DGIFN--ADSETWKEQRQ-MAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFT  194 (528)
Q Consensus       120 ~~~~~~~g--~~~~~--~~g~~~~~~R~-~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  194 (528)
                        ...+.|  .+++.  .+|+.|+++|+ ++++.|+.++++.+ .+.+.+. .+.+.+.+.+....++++|+.+.+..++
T Consensus       111 --~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~-~~~~~~~-~~~l~~~l~~~~~~~~~v~~~~~~~~~~  186 (519)
T PLN00168        111 --SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLF-APARAWV-RRVLVDKLRREAEDAAAPRVVETFQYAM  186 (519)
T ss_pred             --chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHH-HHHHHHH-HHHHHHHHHHhcCCCCCcCHHHHHHHHH
Confidence              112333  23444  68999999876 79999999999988 6777776 6677777766444455689999999999


Q ss_pred             HHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHH----HhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHH
Q 041858          195 LDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSL----FRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIV  270 (528)
Q Consensus       195 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  270 (528)
                      .++++.++||.+++...    ...+............    ....+|.    +.+++.....++..+..+.+.+++...+
T Consensus       187 ~~ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~----l~~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (519)
T PLN00168        187 FCLLVLMCFGERLDEPA----VRAIAAAQRDWLLYVSKKMSVFAFFPA----VTKHLFRGRLQKALALRRRQKELFVPLI  258 (519)
T ss_pred             HHHHHHHHcCCCcChhh----HHHHHHHHHHHHHHhcCCCCHHHhCcc----hhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998875211    1122222222111110    0111121    1111111223455567888889999999


Q ss_pred             HHHHHhhhhc---C-CC----CChhhHHHHHHhcccc---CCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChH
Q 041858          271 SDRRNKLTRL---G-SL----IDQSDLLSRLMDTEEK---NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLE  339 (528)
Q Consensus       271 ~~~~~~~~~~---~-~~----~~~~d~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~  339 (528)
                      +++++.....   . ..    ....|+++.+++....   +..++++++.+++.++++||+|||+.+++|++++|++||+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~  338 (519)
T PLN00168        259 DARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPS  338 (519)
T ss_pred             HHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHH
Confidence            8877643210   0 00    1145899999975421   2359999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEE
Q 041858          340 VETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLY  419 (528)
Q Consensus       340 ~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~  419 (528)
                      +|+|+++||+++.+..        .+.++.+++.+||||+|||+||||++|+++...+|.+.+++.++||.|||||.|.+
T Consensus       339 ~q~kl~~Ei~~v~~~~--------~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~  410 (519)
T PLN00168        339 IQSKLHDEIKAKTGDD--------QEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNF  410 (519)
T ss_pred             HHHHHHHHHHHHhCCC--------CCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEE
Confidence            9999999999998643        14679999999999999999999999999988666556666669999999999999


Q ss_pred             eccccccCCCCCCCCCCCcCCCCcCCCCCc-----cccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeC
Q 041858          420 CTYSMARMESIWGKDCLEFKPERWIKDGQF-----VSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDE  494 (528)
Q Consensus       420 ~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~-----~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~  494 (528)
                      +.+++||||++| +||++|+||||++.+..     ...+...|+|||.|+|+|||++||.+|+++++++|+++|+|++.+
T Consensus       411 ~~~~~~~d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  489 (519)
T PLN00168        411 MVAEMGRDEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVP  489 (519)
T ss_pred             ChHHHhcCcccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCC
Confidence            999999999999 99999999999964211     112345799999999999999999999999999999999999976


Q ss_pred             CCCcccc--cceEEeecCcEEEEEEEccc
Q 041858          495 DHNVVPK--VTTTLYVKNGLMVTLKPRLD  521 (528)
Q Consensus       495 ~~~~~~~--~~~~~~~~~~~~v~~~~r~~  521 (528)
                      +.+.+..  ...+..+++++++++++|+.
T Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        490 GDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             CCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            5443332  34566788899999999974


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=9.3e-75  Score=574.19  Aligned_cols=447  Identities=21%  Similarity=0.311  Sum_probs=341.7

Q ss_pred             cCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH
Q 041858           43 NRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF  122 (528)
Q Consensus        43 pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~  122 (528)
                      +|||+++|++||+..+..   +++..+.+++++||++|++   ++|++++|+++||+++++|+.++...|.+++......
T Consensus        31 ~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         31 LKGPIPIPILGNLHQLGN---LPHRDLTKMSKKYGGIFRI---WFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             CCCCCCCCeeccHhhhcc---cHHHHHHHHHHHhCCeeEE---EecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            389999999999988754   3788999999999999999   8899999999999999999987655666554433222


Q ss_pred             HhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHH
Q 041858          123 QDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAA  202 (528)
Q Consensus       123 ~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  202 (528)
                      ...+++|++..+|+.|+++|+++++.|+..++..+ .+.+.+. .+.+.+.+++....++++|+.+.+..+++|++++++
T Consensus       105 ~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  182 (482)
T PTZ00404        105 HGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHI-YDLLDDQ-VDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI  182 (482)
T ss_pred             eeccCCceeccChHHHHHHHHHHHHHHhhhccccH-HHHHHHH-HHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence            22347889999999999999999999999999887 6888777 666766776654556679999999999999999999


Q ss_pred             hCCCCCCCcCC--CCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041858          203 LGVDPGCLAID--LPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRL  280 (528)
Q Consensus       203 fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  280 (528)
                      ||.+++..++.  .....+.+.+...............  +.....+.....+...+..+.+.+++.+.++++++..+. 
T Consensus       183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  259 (482)
T PTZ00404        183 FNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDV--IEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP-  259 (482)
T ss_pred             hccccccccccchhHHHHHHHHHHHHHHHhCCCchhhh--hhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-
Confidence            99987643211  0112334443333322111111110  001110000112233455667777777777665543221 


Q ss_pred             CCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccc
Q 041858          281 GSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQ  360 (528)
Q Consensus       281 ~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  360 (528)
                         ....|+++.+++..++....+.+++++++..+++||+|||+.+++|++++|++||++|+|+++|+++++++.     
T Consensus       260 ---~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-----  331 (482)
T PTZ00404        260 ---EVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR-----  331 (482)
T ss_pred             ---CCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC-----
Confidence               235689999998653311122234889999999999999999999999999999999999999999998753     


Q ss_pred             cccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccC-CCeeecCCCEEEEeccccccCCCCCCCCCCCcC
Q 041858          361 LQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFP-DGTMVKKGARVLYCTYSMARMESIWGKDCLEFK  439 (528)
Q Consensus       361 ~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~-~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~  439 (528)
                          ..++++++++||||+|||+||||++|+++...+|.+.+++++ +||.|||||.|+++.+++||||++| |||++|+
T Consensus       332 ----~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~-~dP~~F~  406 (482)
T PTZ00404        332 ----NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYF-ENPEQFD  406 (482)
T ss_pred             ----CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCcccc-CCccccC
Confidence                357899999999999999999999999997544444455666 9999999999999999999999999 9999999


Q ss_pred             CCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcc--cccceEEeecCcEEEEEE
Q 041858          440 PERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVV--PKVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       440 P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~  517 (528)
                      ||||+++     .....|+|||+|+|.|||++||.+|+++++++|+++|+++..++.++.  ...+.++. ++++.|+++
T Consensus       407 PeRwl~~-----~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~  480 (482)
T PTZ00404        407 PSRFLNP-----DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLE  480 (482)
T ss_pred             ccccCCC-----CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeee
Confidence            9999864     234679999999999999999999999999999999999987655432  23345566 567999999


Q ss_pred             Ec
Q 041858          518 PR  519 (528)
Q Consensus       518 ~r  519 (528)
                      +|
T Consensus       481 ~R  482 (482)
T PTZ00404        481 KR  482 (482)
T ss_pred             cC
Confidence            87


No 11 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.6e-74  Score=573.54  Aligned_cols=459  Identities=19%  Similarity=0.289  Sum_probs=347.8

Q ss_pred             hhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh
Q 041858           38 CQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN  117 (528)
Q Consensus        38 ~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~  117 (528)
                      +..+.||||+++|++||+..+..  .+++.++.+++++||++|++   ++|+.++|+++||+++++|+.++...|.+++.
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~---~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~   99 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTM---KIGGRRLAVISSAELAKELLKTQDLNFTARPL   99 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCC--CCccHHHHHHHHHcCCeEEE---EecCcCEEEECCHHHHHHHHHhCCccccCCCC
Confidence            34455789999999999988743  23677899999999999999   89999999999999999999987677887765


Q ss_pred             hHHHHH-hhhcCce-eecCChhHHHHHHhh-hhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 041858          118 YRERFQ-DLLGDGI-FNADSETWKEQRQMA-KSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFT  194 (528)
Q Consensus       118 ~~~~~~-~~~g~~~-~~~~g~~~~~~R~~~-~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  194 (528)
                      +..... ...+.++ +...++.|+++|+.+ .+.|+.+++..+ .+.+++. .+.+.+.+.+..++++++|+.+.+..++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~-~~~i~~~-~~~ll~~l~~~~~~~~~vd~~~~~~~~t  177 (499)
T PLN03234        100 LKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASF-RPVREEE-CQRMMDKIYKAADQSGTVDLSELLLSFT  177 (499)
T ss_pred             chhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHh-HHHHHHH-HHHHHHHHHHhccCCCeEEHHHHHHHHH
Confidence            432111 1223333 445678999999975 688999888887 6778777 6666666765555677899999999999


Q ss_pred             HHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhc--cchHHHHHHHHHHHHHHHHHHHHH
Q 041858          195 LDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFG--LGYERRLKIAIQIVQDFADKIVSD  272 (528)
Q Consensus       195 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~  272 (528)
                      +|++++++||.+++....  ....+.+.+........... .. ..++..+++.  ....++..++.+.+.+++.+.+++
T Consensus       178 ~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~-~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~  253 (499)
T PLN03234        178 NCVVCRQAFGKRYNEYGT--EMKRFIDILYETQALLGTLF-FS-DLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDE  253 (499)
T ss_pred             HHHHHHHHhCCcccccch--hHHHHHHHHHHHHHHcCCCc-HH-HHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998764321  12233333333222111100 00 0111111111  133456778888999999999988


Q ss_pred             HHHhhhhcCCCCChhhHHHHHHhccccC---CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 041858          273 RRNKLTRLGSLIDQSDLLSRLMDTEEKN---GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEIN  349 (528)
Q Consensus       273 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~  349 (528)
                      +++....   +....|+++.+++..+++   ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       254 ~~~~~~~---~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~  330 (499)
T PLN03234        254 TLDPNRP---KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVR  330 (499)
T ss_pred             HHhhccc---CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            7654221   123568898888754332   2589999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCC
Q 041858          350 EILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMES  429 (528)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  429 (528)
                      ++.++.         ..++++++++|||++|||+|++|++|++++..+|.+.++..++||.|||||.|+++++++||||+
T Consensus       331 ~~~~~~---------~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~  401 (499)
T PLN03234        331 NVIGDK---------GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTA  401 (499)
T ss_pred             HHhCCC---------CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcc
Confidence            998643         46899999999999999999999999999876555555666699999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCCCCc--cccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC---ccc--cc
Q 041858          430 IWGKDCLEFKPERWIKDGQF--VSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN---VVP--KV  502 (528)
Q Consensus       430 ~~g~~p~~F~P~Rf~~~~~~--~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~--~~  502 (528)
                      +||+||++|+||||++++..  .......|+|||+|+|+|+|+++|..|+++++++|+++|++++.++..   ...  ..
T Consensus       402 ~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  481 (499)
T PLN03234        402 AWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMT  481 (499)
T ss_pred             cccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccc
Confidence            99889999999999975221  122356799999999999999999999999999999999999987532   222  33


Q ss_pred             ceEEeecCcEEEEEEEc
Q 041858          503 TTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       503 ~~~~~~~~~~~v~~~~r  519 (528)
                      +.+..|++.+.+.+++|
T Consensus       482 ~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        482 GLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             ccccccCCCeEEEeecC
Confidence            34445666555555544


No 12 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=7.6e-73  Score=557.30  Aligned_cols=448  Identities=44%  Similarity=0.746  Sum_probs=358.8

Q ss_pred             CCccccchhhhhhhhhhHHHHHHHHHHHcCC-eeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHHhhh
Q 041858           48 LWPVLGVLPSMFLHLNNMYDWATEALIKTGG-TFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQDLL  126 (528)
Q Consensus        48 ~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~~~~  126 (528)
                      ..++.|+......+   ...++.++.+++++ ++++   +.++.  ++++||+.+++|+.++.+.|.++..+...+..+.
T Consensus        48 ~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~  119 (502)
T PLN02426         48 RAYLTASWAKDFDN---LCDWYAHLLRRSPTGTIHV---HVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL  119 (502)
T ss_pred             CCCccHHHHHhccc---HHHHHHHHHHhCCCcEEEE---ecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc
Confidence            46688888664433   56777778888884 6666   34443  8999999999999887678988877766666778


Q ss_pred             cCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhc--CCcccHHHHHHHHHHHHHHHHHhC
Q 041858          127 GDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKS--GDRFDLQEVLLRFTLDSICTAALG  204 (528)
Q Consensus       127 g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~--~~~vdl~~~~~~~~~~vi~~~~fG  204 (528)
                      |+|+++.+|+.|+++||.+++.|+..+++.+....+.+.+.+.+.+.+++..+.  ++++|+.++++.+++|+++.++||
T Consensus       120 g~gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  199 (502)
T PLN02426        120 GRGIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFG  199 (502)
T ss_pred             CCceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999998887633333334366777777664322  467999999999999999999999


Q ss_pred             CCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCC-ccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 041858          205 VDPGCLAIDLPEVPFAKAFEEATELSLFRFLLP-PFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSL  283 (528)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  283 (528)
                      .+++..+.+.+..++.+.+.............+ +++|.+.++++.+..++..++.+.+.+++.+.|+++++...     
T Consensus       200 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-----  274 (502)
T PLN02426        200 LDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-----  274 (502)
T ss_pred             CCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence            998876543334566666665544333222221 23343444554455567778889999999999988876421     


Q ss_pred             CChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccccccccccc
Q 041858          284 IDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQD  363 (528)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  363 (528)
                      ....|+++.+++..     .+++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++.+..        
T Consensus       275 ~~~~dll~~ll~~~-----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~--------  341 (502)
T PLN02426        275 SASKDLLSRFMASI-----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN--------  341 (502)
T ss_pred             CCcchHHHHHHhcC-----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC--------
Confidence            23579999999764     37889999999999999999999999999999999999999999999987643        


Q ss_pred             CCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCc
Q 041858          364 NVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERW  443 (528)
Q Consensus       364 ~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf  443 (528)
                      ...++++++++||||+|||+|+||++|+++...|++.+++++++||.|||||.|.++.+++||||++||+||++|+||||
T Consensus       342 ~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRw  421 (502)
T PLN02426        342 QEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERW  421 (502)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCcccc
Confidence            13589999999999999999999999999998888888877779999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC--cccccceEEeecCcEEEEEEEccc
Q 041858          444 IKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN--VVPKVTTTLYVKNGLMVTLKPRLD  521 (528)
Q Consensus       444 ~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~r~~  521 (528)
                      ++++.....+...++|||+|+|.|+|+++|.+|++++++.|+++|++++.++..  +....+.++.|++|+.|++++|..
T Consensus       422 l~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        422 LKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             CCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEccC
Confidence            974322223456799999999999999999999999999999999999965432  244456788999999999999853


No 13 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.3e-73  Score=565.05  Aligned_cols=461  Identities=19%  Similarity=0.291  Sum_probs=354.4

Q ss_pred             hhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh
Q 041858           38 CQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN  117 (528)
Q Consensus        38 ~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~  117 (528)
                      ...+.||||+++|++||++.+..   .++.++.+++++||++|++   ++|++++|+++||+++++++.++...|.+++.
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~  101 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLGN---MPHVALAKMAKRYGPVMFL---KMGTNSMVVASTPEAARAFLKTLDINFSNRPP  101 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcCC---chHHHHHHHHHHhCCeEEE---EcCCccEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            33455789999999999877743   3788999999999999999   88999999999999999999987667777654


Q ss_pred             hHHHHHhhhc--CceeecCChhHHHHHHhhhh-ccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 041858          118 YRERFQDLLG--DGIFNADSETWKEQRQMAKS-HMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFT  194 (528)
Q Consensus       118 ~~~~~~~~~g--~~~~~~~g~~~~~~R~~~~~-~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  194 (528)
                      .........+  .++++.+|+.|+++|+.+++ .|+.+++..+ .+.+.+. .+.+.+.+.+...+++++|+.+.+..++
T Consensus       102 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~-~~~i~~~-~~~~~~~l~~~~~~g~~~~~~~~~~~~~  179 (504)
T PLN00110        102 NAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDW-SQVRTVE-LGHMLRAMLELSQRGEPVVVPEMLTFSM  179 (504)
T ss_pred             ccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHh-hHHHHHH-HHHHHHHHHHhccCCCcEeHHHHHHHHH
Confidence            4322212222  46777889999999999985 6888888887 6777666 4445555555445677899999999999


Q ss_pred             HHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhcc-chHHHHHHHHHHHHHHHHHHHHHH
Q 041858          195 LDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGL-GYERRLKIAIQIVQDFADKIVSDR  273 (528)
Q Consensus       195 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~~  273 (528)
                      +|++++++||.++.... +....++.+.+........... .. ..++...+++. ...+...+..+.+.+++.+.++++
T Consensus       180 ~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  256 (504)
T PLN00110        180 ANMIGQVILSRRVFETK-GSESNEFKDMVVELMTTAGYFN-IG-DFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEH  256 (504)
T ss_pred             HHHHHHHHhCCcccccC-chhHHHHHHHHHHHHHHhcccc-HH-HHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998762111 1112345555544433211100 00 01112223221 233455566777888888888877


Q ss_pred             HHhhhhcCCCCChhhHHHHHHhcccc--CCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 041858          274 RNKLTRLGSLIDQSDLLSRLMDTEEK--NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEI  351 (528)
Q Consensus       274 ~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~  351 (528)
                      ++....   .....|+++.+++..+.  +..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++++
T Consensus       257 ~~~~~~---~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  333 (504)
T PLN00110        257 TASAHE---RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQV  333 (504)
T ss_pred             Hhhccc---cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            654321   12346899999976432  2458999999999999999999999999999999999999999999999999


Q ss_pred             hcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCC
Q 041858          352 LSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIW  431 (528)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~  431 (528)
                      .++.         ..++++++++|||++|||+||||++|++++..+|.+.+++.++||.|||||.|+++.+++||||++|
T Consensus       334 ~~~~---------~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~  404 (504)
T PLN00110        334 IGRN---------RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVW  404 (504)
T ss_pred             hCCC---------CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhc
Confidence            8643         4589999999999999999999999999986655556666679999999999999999999999999


Q ss_pred             CCCCCCcCCCCcCCCCCcc-c--cCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCccc--ccceEE
Q 041858          432 GKDCLEFKPERWIKDGQFV-S--ENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVP--KVTTTL  506 (528)
Q Consensus       432 g~~p~~F~P~Rf~~~~~~~-~--~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~  506 (528)
                       +||++|+||||++++... .  .+...++|||+|+|.|+|++||..|+++++++|+++|++++.++.+...  ..+.++
T Consensus       405 -~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  483 (504)
T PLN00110        405 -ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLAL  483 (504)
T ss_pred             -CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCccccccccc
Confidence             999999999999642111 1  1235799999999999999999999999999999999999977654432  345667


Q ss_pred             eecCcEEEEEEEcccc
Q 041858          507 YVKNGLMVTLKPRLDL  522 (528)
Q Consensus       507 ~~~~~~~v~~~~r~~~  522 (528)
                      .|++++.+++++|.++
T Consensus       484 ~~~~~~~~~~~~r~~~  499 (504)
T PLN00110        484 QKAVPLSAMVTPRLHQ  499 (504)
T ss_pred             ccCCCceEeeccCCCc
Confidence            7888999999999643


No 14 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.1e-73  Score=569.39  Aligned_cols=456  Identities=20%  Similarity=0.331  Sum_probs=350.9

Q ss_pred             ccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHH-
Q 041858           42 TNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRE-  120 (528)
Q Consensus        42 ~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~-  120 (528)
                      .||||+++|++||++.+..   +++.++.+++++||++|++   ++|+.++|+++||+++++++.++...|.+++.... 
T Consensus        35 ~pPgp~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         35 LPPGPRGWPVLGNLPQLGP---KPHHTMAALAKTYGPLFRL---RFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCccCCCCCccccHHhcCC---chhHHHHHHHHHhCCeeEE---ecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            4689999999999988754   3788999999999999999   88999999999999999999887667777654321 


Q ss_pred             -HHHhhhcCceeecCChhHHHHHHhhh-hccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH
Q 041858          121 -RFQDLLGDGIFNADSETWKEQRQMAK-SHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSI  198 (528)
Q Consensus       121 -~~~~~~g~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  198 (528)
                       .+....+.+++..+|+.|+++|++++ +.|+.+++..+ .+.+.++ .+.+.+.+++. .+++++|+.+.++.+++|++
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi  185 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDF-RHVREEE-VALLVRELARQ-HGTAPVNLGQLVNVCTTNAL  185 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHh-HHHHHHH-HHHHHHHHHHh-cCCCceeHHHHHHHHHHHHH
Confidence             11111123466678999999999998 78999988888 7888777 56666666653 24567999999999999999


Q ss_pred             HHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041858          199 CTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGL-GYERRLKIAIQIVQDFADKIVSDRRNKL  277 (528)
Q Consensus       199 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~  277 (528)
                      +.++||.++...+.+.....+.+.+..+........  ....++..++++. ...++..+..+.+.+++.+.++++++..
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  263 (517)
T PLN02687        186 GRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFN--VGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAG  263 (517)
T ss_pred             HHHHhCccccccCCcchHHHHHHHHHHHHHHhccCc--HHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999987643322122344444444433221100  0001112223322 2234556677888889999998887654


Q ss_pred             hhcCCCCChhhHHHHHHhcccc------CCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 041858          278 TRLGSLIDQSDLLSRLMDTEEK------NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEI  351 (528)
Q Consensus       278 ~~~~~~~~~~d~l~~ll~~~~~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~  351 (528)
                      ...  +....|+++.+++..++      +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       264 ~~~--~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  341 (517)
T PLN02687        264 QTG--SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAV  341 (517)
T ss_pred             ccc--CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            321  12356999999986532      2359999999999999999999999999999999999999999999999999


Q ss_pred             hcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCC
Q 041858          352 LSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIW  431 (528)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~  431 (528)
                      .+..         ..++.+++++||||+|||+|+||++|+++...+|.+.+++.++||.|||||.|.++.+++||||++|
T Consensus       342 ~~~~---------~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~  412 (517)
T PLN02687        342 VGRD---------RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQW  412 (517)
T ss_pred             cCCC---------CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccC
Confidence            8643         4689999999999999999999999999986555556667779999999999999999999999999


Q ss_pred             CCCCCCcCCCCcCCCCCcc----ccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC---ccc--cc
Q 041858          432 GKDCLEFKPERWIKDGQFV----SENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN---VVP--KV  502 (528)
Q Consensus       432 g~~p~~F~P~Rf~~~~~~~----~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~--~~  502 (528)
                       +||++|+||||++++...    ......|+|||.|+|+|+|++||.+|+++++++|+++|++++.++..   ...  ..
T Consensus       413 -~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  491 (517)
T PLN02687        413 -PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAY  491 (517)
T ss_pred             -CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccccc
Confidence             999999999999742111    12345799999999999999999999999999999999999976542   221  22


Q ss_pred             ceEEeecCcEEEEEEEcc
Q 041858          503 TTTLYVKNGLMVTLKPRL  520 (528)
Q Consensus       503 ~~~~~~~~~~~v~~~~r~  520 (528)
                      ...+.+..++.+++++|.
T Consensus       492 ~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        492 GLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             ceeeecCCCeEEeeccCC
Confidence            333445567888888884


No 15 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=4.7e-73  Score=564.65  Aligned_cols=450  Identities=20%  Similarity=0.309  Sum_probs=339.1

Q ss_pred             hhhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCCh
Q 041858           37 ICQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGK  116 (528)
Q Consensus        37 ~~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~  116 (528)
                      .+..+.||||+++|++|+++.+...   .+.++.+++++||++|++   ++++.++|+++||+++++|+.++...|++.+
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~~~---~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~  105 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMDQL---THRGLANLAKQYGGLFHM---RMGYLHMVAVSSPEVARQVLQVQDSVFSNRP  105 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCc---chHHHHHHHHHhCCeeEE---EeCCcceEEeCCHHHHHHHHHhhhhhhcCCC
Confidence            3444556899999999999876332   456789999999999999   8899999999999999999997766676654


Q ss_pred             hhHHHHHhhh---cCceeecCChhHHHHHHh-hhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHH
Q 041858          117 NYRERFQDLL---GDGIFNADSETWKEQRQM-AKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLR  192 (528)
Q Consensus       117 ~~~~~~~~~~---g~~~~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  192 (528)
                      .... .....   +.+++..+|+.|+++|++ +++.|+...+..+ .+.+ ++ .+.+.+.+..  ..++++|+.+.+..
T Consensus       106 ~~~~-~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~-~~~~-~~-~~~~~~~l~~--~~~~~v~~~~~~~~  179 (516)
T PLN02183        106 ANIA-ISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESW-ASVR-DE-VDSMVRSVSS--NIGKPVNIGELIFT  179 (516)
T ss_pred             cccc-hhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHH-HHHH-HH-HHHHHHHHHh--cCCCcEeHHHHHHH
Confidence            3221 11122   356788899999999998 5788998888776 5543 44 4455555543  34678999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHH---HhhcCCccccchhhhh-ccchHHHHHHHHHHHHHHHHH
Q 041858          193 FTLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSL---FRFLLPPFIWKPMKLF-GLGYERRLKIAIQIVQDFADK  268 (528)
Q Consensus       193 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~  268 (528)
                      +++|++++++||.+.+..     ..++.+.+........   .....|     +..++ +....++..+..+.+.+++..
T Consensus       180 ~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (516)
T PLN02183        180 LTRNITYRAAFGSSSNEG-----QDEFIKILQEFSKLFGAFNVADFIP-----WLGWIDPQGLNKRLVKARKSLDGFIDD  249 (516)
T ss_pred             HHHHHHHhHhhcCcccch-----HHHHHHHHHHHHHHhCCccHHHhcc-----hhHhcccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999876421     1234444444333221   111112     22222 223345666777888888888


Q ss_pred             HHHHHHHhhhhcC----CCCChhhHHHHHHhcccc------------CCCCChhhHHHHHHhhheechhchHHHHHHHHH
Q 041858          269 IVSDRRNKLTRLG----SLIDQSDLLSRLMDTEEK------------NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFW  332 (528)
Q Consensus       269 ~i~~~~~~~~~~~----~~~~~~d~l~~ll~~~~~------------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  332 (528)
                      .++++.+.....+    .+....|+++.+++..++            ...++++++++++..+++||+|||+.+++|+++
T Consensus       250 ~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~  329 (516)
T PLN02183        250 IIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMA  329 (516)
T ss_pred             HHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHH
Confidence            8887765433211    112346899999974321            124899999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeec
Q 041858          333 LLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVK  412 (528)
Q Consensus       333 ~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip  412 (528)
                      +|++||++|+|+++|++++++..         +.++.+++++||||+|||+||||++|++|+..|++.++ +.++||.||
T Consensus       330 ~La~~Pevq~kl~~Ei~~v~~~~---------~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d-~~l~g~~IP  399 (516)
T PLN02183        330 ELMKSPEDLKRVQQELADVVGLN---------RRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAED-AEVAGYFIP  399 (516)
T ss_pred             HHHhCHHHHHHHHHHHHHHcCCC---------CCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCc-eeECCEEEC
Confidence            99999999999999999998642         35799999999999999999999999999988766555 555999999


Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCc-cccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEE
Q 041858          413 KGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQF-VSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVK  491 (528)
Q Consensus       413 ~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~-~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~  491 (528)
                      |||.|.++.+++||||++| +||++|+||||++++.. ...+.+.|+|||+|+|+|+|+++|++|+++++|+|+++|+++
T Consensus       400 kGt~V~~~~~~~hrd~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~  478 (516)
T PLN02183        400 KRSRVMINAWAIGRDKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWE  478 (516)
T ss_pred             CCCEEEEehhhhcCCcccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEE
Confidence            9999999999999999999 99999999999975321 122456799999999999999999999999999999999999


Q ss_pred             eeCCCCc---cccc--ceEEeecCcEEEEEEEc
Q 041858          492 VDEDHNV---VPKV--TTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       492 ~~~~~~~---~~~~--~~~~~~~~~~~v~~~~r  519 (528)
                      +.++..+   ....  +.+..+...+.+.+++|
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        479 LPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             cCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence            8775422   1111  22222333556666665


No 16 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.2e-72  Score=560.28  Aligned_cols=462  Identities=17%  Similarity=0.236  Sum_probs=336.0

Q ss_pred             hhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh
Q 041858           38 CQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN  117 (528)
Q Consensus        38 ~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~  117 (528)
                      +....||||+++|++|++..+..+  ..+..+.+++++||++|++   ++|++++|+++||+.+++|+.++...|.+++.
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~--~~~~~~~~~~~~yG~v~~i---~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~  101 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDD--LNHRNLAEMAKKYGDVFLL---RMGQRNLVVVSSPELAKEVLHTQGVEFGSRTR  101 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCC--chhHHHHHHHHHhCCeEEE---EcCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Confidence            344556899999999999887543  2567899999999999999   88999999999999999999876566665432


Q ss_pred             hHHHHHhhhc---CceeecCChhHHHHHHhhh-hccchhhhhHhhHHHHHHHHHHHHHHHHHHHh-hcCCcccHHHHHHH
Q 041858          118 YRERFQDLLG---DGIFNADSETWKEQRQMAK-SHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLV-KSGDRFDLQEVLLR  192 (528)
Q Consensus       118 ~~~~~~~~~g---~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~-~~~~~vdl~~~~~~  192 (528)
                      .. ....+.|   .+++..+|+.|+++|+.+. +.|+.+.+..+ .+.+++. .+.+.+.+.+.. ..++.+++.+.++.
T Consensus       102 ~~-~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~-~~~i~~~-v~~lv~~l~~~~~~~~~~v~~~~~~~~  178 (503)
T PLN02394        102 NV-VFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQY-RYGWEEE-ADLVVEDVRANPEAATEGVVIRRRLQL  178 (503)
T ss_pred             cc-hHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHh-hHHHHHH-HHHHHHHHHHhhhccCCcEecHHHHHH
Confidence            11 1122223   3477788999999999996 88988888777 6778777 455555555432 23456899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHh-hcCCccccchhhhhccchHHHHHHHHHHHHH-HHHHHH
Q 041858          193 FTLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFR-FLLPPFIWKPMKLFGLGYERRLKIAIQIVQD-FADKIV  270 (528)
Q Consensus       193 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i  270 (528)
                      +++|++++++||.+++..++.. ...+.............. .......+.+...+. ...+..........+ +....+
T Consensus       179 ~~~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  256 (503)
T PLN02394        179 MMYNIMYRMMFDRRFESEDDPL-FLKLKALNGERSRLAQSFEYNYGDFIPILRPFLR-GYLKICQDVKERRLALFKDYFV  256 (503)
T ss_pred             HHHHHHHHHHhCCCcccccchh-HHHHHHHHHHHHHHhcccccchhhhchHHHHHhh-HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999886533211 111111111111110000 000000110111110 111112222222222 333445


Q ss_pred             HHHHHhhhhc-CCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 041858          271 SDRRNKLTRL-GSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEIN  349 (528)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~  349 (528)
                      +++++..+.. .......|+++.+++..++ +.++++++..++..+++||+|||+.+++|++|+|++||++|+||++|++
T Consensus       257 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  335 (503)
T PLN02394        257 DERKKLMSAKGMDKEGLKCAIDHILEAQKK-GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELD  335 (503)
T ss_pred             HHHHHHhhhccCCcchhhhHHHHHHhcccc-CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            5555432211 1112457999999987644 3489999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCC
Q 041858          350 EILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMES  429 (528)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  429 (528)
                      ++.+.+         ..++++++++||||+|||+|+||++|++|+..+|.+.++..++||.|||||.|.++++++||||+
T Consensus       336 ~v~~~~---------~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~  406 (503)
T PLN02394        336 TVLGPG---------NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPE  406 (503)
T ss_pred             HHhCCC---------CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcc
Confidence            998643         35789999999999999999999999999987666565666799999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCCCC--ccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC-cccc--cc-
Q 041858          430 IWGKDCLEFKPERWIKDGQ--FVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN-VVPK--VT-  503 (528)
Q Consensus       430 ~~g~~p~~F~P~Rf~~~~~--~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~--~~-  503 (528)
                      +| +||++|+||||++++.  ........|+|||+|+|+|+|++||.+|+++++++|+++|++++.++.+ .+..  .+ 
T Consensus       407 ~~-~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  485 (503)
T PLN02394        407 LW-KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQ  485 (503)
T ss_pred             cC-CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCc
Confidence            99 9999999999986421  1122356799999999999999999999999999999999999877652 3332  32 


Q ss_pred             eEEeecCcEEEEEEEcc
Q 041858          504 TTLYVKNGLMVTLKPRL  520 (528)
Q Consensus       504 ~~~~~~~~~~v~~~~r~  520 (528)
                      +++..+.++.++++||.
T Consensus       486 ~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        486 FSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             eeeccCCCceEEeecCC
Confidence            45545668999999996


No 17 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.2e-72  Score=563.12  Aligned_cols=458  Identities=21%  Similarity=0.297  Sum_probs=349.2

Q ss_pred             cCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH
Q 041858           43 NRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF  122 (528)
Q Consensus        43 pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~  122 (528)
                      ||||+++|++||+..+..   .++.++.+++++||++|++   ++++.++++++||+++++|+.++...|++++.+....
T Consensus        34 ppgp~~~pl~G~~~~~~~---~~~~~~~~~~~kyG~v~~~---~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~  107 (514)
T PLN03112         34 PPGPPRWPIVGNLLQLGP---LPHRDLASLCKKYGPLVYL---RLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAV  107 (514)
T ss_pred             ccCCCCCCeeeeHHhcCC---chHHHHHHHHHHhCCeEEE---EecCccEEEECCHHHHHHHHHhCCcccccCCCcccce
Confidence            489999999999988753   3788899999999999988   7899999999999999999987767787766543222


Q ss_pred             Hhhhc--CceeecCChhHHHHHHhhh-hccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHH
Q 041858          123 QDLLG--DGIFNADSETWKEQRQMAK-SHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSIC  199 (528)
Q Consensus       123 ~~~~g--~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  199 (528)
                      ...+|  .+++..+|+.|+++|+.+. +.|+.+++..+ .+.+.+. .+.+.+.+.+....++++|+.+.++.+++++++
T Consensus       108 ~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~-~~~~~~~-~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~  185 (514)
T PLN03112        108 HLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESF-AKHRAEE-ARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVT  185 (514)
T ss_pred             eeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHh-hHHHHHH-HHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHH
Confidence            22333  3456678999999999954 67999999888 5677666 455554443333456689999999999999999


Q ss_pred             HHHhCCCCCCCcCC--CCCchHHHHHHHHHHHHHH---hhcCCccccchhhhhc-cchHHHHHHHHHHHHHHHHHHHHHH
Q 041858          200 TAALGVDPGCLAID--LPEVPFAKAFEEATELSLF---RFLLPPFIWKPMKLFG-LGYERRLKIAIQIVQDFADKIVSDR  273 (528)
Q Consensus       200 ~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~  273 (528)
                      .++||.++......  .....+.+.+..+......   ....|     ..+++. ....++..+..+.+.+++...++++
T Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  260 (514)
T PLN03112        186 RMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLP-----AWRWLDPYGCEKKMREVEKRVDEFHDKIIDEH  260 (514)
T ss_pred             HHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhCh-----HHHhcCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987432211  0112233333333222111   11112     222222 2334566677888888899999887


Q ss_pred             HHhhhhcCCCCChhhHHHHHHhccccC--CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 041858          274 RNKLTRLGSLIDQSDLLSRLMDTEEKN--GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEI  351 (528)
Q Consensus       274 ~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~  351 (528)
                      ++..+.........|+++.+++..+++  ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~  340 (514)
T PLN03112        261 RRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSV  340 (514)
T ss_pred             HHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHh
Confidence            765332111123569999999865432  248999999999999999999999999999999999999999999999999


Q ss_pred             hcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCC
Q 041858          352 LSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIW  431 (528)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~  431 (528)
                      +++.         +.++.+++++|||++|||+||+|++|++++..+|.+.+++.++||.|||||.|.++++++||||++|
T Consensus       341 ~~~~---------~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~  411 (514)
T PLN03112        341 VGRN---------RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIW  411 (514)
T ss_pred             cCCC---------CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccC
Confidence            8643         4589999999999999999999999999987555555556669999999999999999999999999


Q ss_pred             CCCCCCcCCCCcCCCCC--cc--ccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCC---Cccc--cc
Q 041858          432 GKDCLEFKPERWIKDGQ--FV--SENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDH---NVVP--KV  502 (528)
Q Consensus       432 g~~p~~F~P~Rf~~~~~--~~--~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~--~~  502 (528)
                       +||++|+||||..+..  ..  ......|+|||.|+|+|||++||.+|+++++++|+++|++++.++.   +...  ..
T Consensus       412 -~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  490 (514)
T PLN03112        412 -DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVY  490 (514)
T ss_pred             -CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCcccc
Confidence             9999999999865311  11  1234579999999999999999999999999999999999987543   1222  22


Q ss_pred             ceEEeecCcEEEEEEEccccc
Q 041858          503 TTTLYVKNGLMVTLKPRLDLD  523 (528)
Q Consensus       503 ~~~~~~~~~~~v~~~~r~~~~  523 (528)
                      +.++.+.+++.+++.||...+
T Consensus       491 ~~~~~~~~~~~~~~~~r~~~~  511 (514)
T PLN03112        491 GMTMPKAKPLRAVATPRLAPH  511 (514)
T ss_pred             CcccccCCCeEEEeecCCccc
Confidence            345556778999999997653


No 18 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.2e-72  Score=560.37  Aligned_cols=437  Identities=19%  Similarity=0.313  Sum_probs=329.9

Q ss_pred             hhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh
Q 041858           38 CQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN  117 (528)
Q Consensus        38 ~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~  117 (528)
                      +....||||+++|++||++.+..  .+++..+.+++++||++|.+   ++++.++|+++||+++++|+.++...|.+.+.
T Consensus        26 ~~~~~ppgp~~~p~~G~l~~l~~--~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~  100 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGNLLQLQK--LNPQRFFAGWAKKYGPILSY---RIGSRTMVVISSAELAKELLKTQDVNFADRPP  100 (502)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCC--CChhHHHHHHHHHhCCeEEE---ecCCCcEEEECCHHHHHHHHHhCcccccCCCC
Confidence            34455789999999999988743  34788899999999999988   88999999999999999999887666766543


Q ss_pred             hHHHHHhhhcC-ce-eecCChhHHHHHHh-hhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 041858          118 YRERFQDLLGD-GI-FNADSETWKEQRQM-AKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFT  194 (528)
Q Consensus       118 ~~~~~~~~~g~-~~-~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  194 (528)
                      +........|. ++ +..+|+.|+++|+. +++.|+..++..+ .+.+.+. .+.+.+.+++....++++|+.+.+..++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~~~~vdl~~~~~~~t  178 (502)
T PLN02966        101 HRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATF-KHVREEE-ARRMMDKINKAADKSEVVDISELMLTFT  178 (502)
T ss_pred             CccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHH-HHHHHHH-HHHHHHHHHHhccCCCceeHHHHHHHHH
Confidence            32111001222 23 45579999999998 8889999988887 7888777 6666667766545566899999999999


Q ss_pred             HHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHH---hhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHH
Q 041858          195 LDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLF---RFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVS  271 (528)
Q Consensus       195 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  271 (528)
                      +|+++.++||.+++..+.  ....+.+.+.........   ...+| + +.....++ ...+......+...+++.+.++
T Consensus       179 ~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~  253 (502)
T PLN02966        179 NSVVCRQAFGKKYNEDGE--EMKRFIKILYGTQSVLGKIFFSDFFP-Y-CGFLDDLS-GLTAYMKECFERQDTYIQEVVN  253 (502)
T ss_pred             HHHHHHHHhCCccCccch--HHHHHHHHHHHHHHHhCcccHHHhhc-h-hhhhhhhc-cHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998864322  112233333222211111   11112 0 00011011 1122233455566666777666


Q ss_pred             HHHHhhhhcCCCCChhhHHHHHHhccccC---CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHH
Q 041858          272 DRRNKLTRLGSLIDQSDLLSRLMDTEEKN---GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEI  348 (528)
Q Consensus       272 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei  348 (528)
                      +..+....   .....++++.+++..+++   ..++++++.+++..+++||+|||+++++|++++|++|||+|+|+++|+
T Consensus       254 ~~~~~~~~---~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei  330 (502)
T PLN02966        254 ETLDPKRV---KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEV  330 (502)
T ss_pred             HHHhcccc---ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            65432111   123468999988755432   348999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCC
Q 041858          349 NEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARME  428 (528)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~  428 (528)
                      +++.+..+       +..++++++++||||+|||+|+||++|+++...+|.+.+++.++||.|||||.|+++++++||||
T Consensus       331 ~~v~~~~~-------~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp  403 (502)
T PLN02966        331 REYMKEKG-------STFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDE  403 (502)
T ss_pred             HHHhcccC-------CCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCc
Confidence            99986421       13579999999999999999999999999987555555667779999999999999999999999


Q ss_pred             CCCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCC
Q 041858          429 SIWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDH  496 (528)
Q Consensus       429 ~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  496 (528)
                      ++|||||++|+||||++++.........|+|||+|+|+|+|++||.+|++++++.|+++|+|++.++.
T Consensus       404 ~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        404 KEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             ccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            99999999999999996522112245679999999999999999999999999999999999987764


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3e-72  Score=551.75  Aligned_cols=437  Identities=20%  Similarity=0.268  Sum_probs=337.2

Q ss_pred             HHhhhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCC
Q 041858           35 SCICQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPK  114 (528)
Q Consensus        35 ~~~~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~  114 (528)
                      .++.+++.||||+++|++||++.+.++   ...++++++++||++|++   ++|++++++++||+++++|+.++...|.+
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~~~~---~~~~~~~~~~~yG~i~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~   98 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEFLKQ---GPDFMKNQRLRYGSFFKS---HILGCPTIVSMDPELNRYILMNEGKGLVP   98 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHHHHh---hHHHHHHHHHHhccCccc---eecCCCeEEEeCHHHHHHHHcCCCCeEEe
Confidence            333445667899999999999887654   566889999999999999   88999999999999999999876566644


Q ss_pred             ChhhHHHHHhhhcC-ceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHH
Q 041858          115 GKNYRERFQDLLGD-GIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRF  193 (528)
Q Consensus       115 ~~~~~~~~~~~~g~-~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  193 (528)
                      ... .... ..+|. +++..+|+.|+++|+++++.|+...+...+.+.+.+. .+.+   ++++ ..++++|+.+.+..+
T Consensus        99 ~~~-~~~~-~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~~v~~~~~~~~~  171 (463)
T PLN02774         99 GYP-QSML-DILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEF-MRSH---LSGW-DGLKTIDIQEKTKEM  171 (463)
T ss_pred             cCC-HHHH-HHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHHH---HHhh-CCCCCEEeeHHHHHH
Confidence            322 2222 44554 6888899999999999999999888765335555544 3333   3333 233569999999999


Q ss_pred             HHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHH
Q 041858          194 TLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDR  273 (528)
Q Consensus       194 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  273 (528)
                      ++++++.++||.+.+..     ..++.+.   +..........+       .+++....++..++.+.+.+++.+.++++
T Consensus       172 ~~~~~~~~~~g~~~~~~-----~~~~~~~---~~~~~~~~~~~~-------~~lp~~~~~~~~~~~~~~~~~~~~~i~~r  236 (463)
T PLN02774        172 ALLSALKQIAGTLSKPI-----SEEFKTE---FFKLVLGTLSLP-------IDLPGTNYRSGVQARKNIVRMLRQLIQER  236 (463)
T ss_pred             HHHHHHHHHcCCCChHH-----HHHHHHH---HHHHhcccccCC-------cCCCChhhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999754311     0112221   111111111111       12332334556678888899999999887


Q ss_pred             HHhhhhcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 041858          274 RNKLTRLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILS  353 (528)
Q Consensus       274 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  353 (528)
                      ++..      ....|+++.+++..+.+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+
T Consensus       237 ~~~~------~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~  310 (463)
T PLN02774        237 RASG------ETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRE  310 (463)
T ss_pred             HhcC------CCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence            6541      2357999999975443345899999999999999999999999999999999999999999999999975


Q ss_pred             ccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCC
Q 041858          354 HKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGK  433 (528)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~  433 (528)
                      ..+      .+..++++++++||||+|||+|+||++|+++...|++.+| ++++||.||||+.|+++.+++||||++| +
T Consensus       311 ~~~------~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d-~~l~g~~IpkGt~v~~~~~~~~rdp~~~-~  382 (463)
T PLN02774        311 RKR------PEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQD-MELNGYVIPKGWRIYVYTREINYDPFLY-P  382 (463)
T ss_pred             ccC------CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCC-eeECCEEECCCCEEEEehHHhcCCcccC-C
Confidence            421      1246899999999999999999999999998777666554 5559999999999999999999999999 9


Q ss_pred             CCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEE
Q 041858          434 DCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLM  513 (528)
Q Consensus       434 ~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  513 (528)
                      ||++|+||||++++.   .....|+|||+|+|.|||+++|.+|+++++++|+++|++++.++.++...  ..+.|++|++
T Consensus       383 dP~~F~PeRfl~~~~---~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~~--~~~~p~~g~~  457 (463)
T PLN02774        383 DPMTFNPWRWLDKSL---ESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMKF--PRVEAPNGLH  457 (463)
T ss_pred             ChhccCchhcCCCCc---CCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccccC--CCCCCCCCce
Confidence            999999999996421   11235999999999999999999999999999999999999876543322  2455889999


Q ss_pred             EEEEE
Q 041858          514 VTLKP  518 (528)
Q Consensus       514 v~~~~  518 (528)
                      |+++|
T Consensus       458 ~~~~~  462 (463)
T PLN02774        458 IRVSP  462 (463)
T ss_pred             EEeee
Confidence            99985


No 20 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.1e-72  Score=512.39  Aligned_cols=452  Identities=25%  Similarity=0.383  Sum_probs=380.2

Q ss_pred             CCCCCCccccchhhhhhhh-hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCCh-hhHH-
Q 041858           44 RGPMLWPVLGVLPSMFLHL-NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGK-NYRE-  120 (528)
Q Consensus        44 PGP~~~P~iG~~~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~-~~~~-  120 (528)
                      |||.++|++|.++.+.... .+.++.....+++||+||+..  -+|+...|.+.+|+.++.++.++ +.++.++ .+.. 
T Consensus        53 P~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~--~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~w  129 (519)
T KOG0159|consen   53 PGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREG--MLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEPW  129 (519)
T ss_pred             CCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeec--cCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccchh
Confidence            7999999999988543322 568999999999999999983  27889999999999999999987 4445553 2221 


Q ss_pred             -HHHhhhc--CceeecCChhHHHHHHhhhhcc-chhhhhHhhHHHHHHHHHHHHHHHHHHHhh---cCCcccHHHHHHHH
Q 041858          121 -RFQDLLG--DGIFNADSETWKEQRQMAKSHM-HSSRFMEHSLQTMQDLVQQKLLRLTEKLVK---SGDRFDLQEVLLRF  193 (528)
Q Consensus       121 -~~~~~~g--~~~~~~~g~~~~~~R~~~~~~~-~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~  193 (528)
                       .-...++  .|++..+|+.|.+.|..+++.+ ..+.++.+ .+.+++. .++|...++...+   ...+.|+.+.+.++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~y-l~~l~~V-~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRY-LPQLNAV-SDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHH-hhHHHHH-HHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence             1223444  6899999999999999999985 66777777 6777666 8888888887654   33478999999999


Q ss_pred             HHHHHHHHHhCCCCCCCcCCC--CCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHH
Q 041858          194 TLDSICTAALGVDPGCLAIDL--PEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVS  271 (528)
Q Consensus       194 ~~~vi~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  271 (528)
                      +++.||.++||.+.++..+..  ....+.+++..++..+......|    .+.++++++.|++..++.+.+.++....|+
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p----~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id  283 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMP----SLWRYFPTKVWKDFVRAWDQIFDVGDKYID  283 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc----hHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987642  23467777777777776666665    466788889999999999999999999999


Q ss_pred             HHHHhhhhcCCC--CChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 041858          272 DRRNKLTRLGSL--IDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEIN  349 (528)
Q Consensus       272 ~~~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~  349 (528)
                      +..+..+.....  +....++..|.+ .+    ++.+++..++++++.||.|||+.++.|++|.|++||++|++|++|+.
T Consensus       284 ~~l~~l~~~~~~~~~~~~~l~~~L~~-~~----l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~  358 (519)
T KOG0159|consen  284 NALEELEKQDSAGSEYTGSLLELLLR-KE----LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEIL  358 (519)
T ss_pred             HHHHHHHhccccccchhHHHHHHHHH-cc----CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence            998887764321  223344444443 33    89999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCC
Q 041858          350 EILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMES  429 (528)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  429 (528)
                      ++....        +..++.+++.+||||+||||||+||+|.++...|...+|.++ +||.|||||.|.++++.+.+||+
T Consensus       359 ~~~p~~--------~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL-~gY~vPagT~V~l~~~~~~r~~~  429 (519)
T KOG0159|consen  359 AVLPSG--------NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVL-SGYHVPAGTLVVLFLYVLGRNPA  429 (519)
T ss_pred             hhCCCc--------ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhcee-ccceecCCCeEEEeehhhccChh
Confidence            998764        257899999999999999999999999999988877776555 99999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeec
Q 041858          430 IWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVK  509 (528)
Q Consensus       430 ~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  509 (528)
                      +| ++|++|+||||++++. ...+++.++|||.|+|+|+||++|++|+-+.|++++++|+++..++.+.+....+.+.|.
T Consensus       430 ~F-~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~  507 (519)
T KOG0159|consen  430 YF-PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPN  507 (519)
T ss_pred             hC-CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCC
Confidence            99 9999999999998642 456788999999999999999999999999999999999999988777888888889999


Q ss_pred             CcEEEEEEEcc
Q 041858          510 NGLMVTLKPRL  520 (528)
Q Consensus       510 ~~~~v~~~~r~  520 (528)
                      .++..+|++|+
T Consensus       508 ~~l~f~f~~r~  518 (519)
T KOG0159|consen  508 RPLRFKFRPRN  518 (519)
T ss_pred             CCcceeeeeCC
Confidence            99999999986


No 21 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.3e-71  Score=549.95  Aligned_cols=458  Identities=24%  Similarity=0.385  Sum_probs=366.1

Q ss_pred             CCCCCccccchhhhhhhh--hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH
Q 041858           45 GPMLWPVLGVLPSMFLHL--NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF  122 (528)
Q Consensus        45 GP~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~  122 (528)
                      |-.|||++|+.+++..+.  .+++..+.+++++||++|++   ++|+.++++++||+++++|+.+.+..|.+...+. ..
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~-~~   91 (489)
T PLN02936         16 DDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRL---AAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE-VS   91 (489)
T ss_pred             CCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEE---ccCCccEEEEcCHHHHHHHHHhccccccCcchhh-hh
Confidence            888999999999998876  66899999999999999999   8899999999999999999987657787765433 33


Q ss_pred             HhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHH
Q 041858          123 QDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAA  202 (528)
Q Consensus       123 ~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  202 (528)
                      ....|.+++..+|+.|+++|+++++.|+..++..+..+.+.+. .+.+.+.+++....++++|+.+.++.+++|+++.++
T Consensus        92 ~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~-~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         92 EFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKC-AERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             HHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            3456788888999999999999999999888777644455555 677777777765566789999999999999999999


Q ss_pred             hCCCCCCCcCCCCCchHHHHHHHHHHHHHHhh--cCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041858          203 LGVDPGCLAIDLPEVPFAKAFEEATELSLFRF--LLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRL  280 (528)
Q Consensus       203 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  280 (528)
                      ||.+++..+.+   .++.+.+...........  ..|.+.+.+..++ .+..++..++.+.+.+++.+.++++++..+..
T Consensus       171 fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~-~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~  246 (489)
T PLN02936        171 FNYNFDSLTTD---SPVIQAVYTALKEAETRSTDLLPYWKVDFLCKI-SPRQIKAEKAVTVIRETVEDLVDKCKEIVEAE  246 (489)
T ss_pred             cCCCccccccC---cHHHHHHHHHHHHHHHhhhccchHHhhHHHhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99998764321   234444433222211111  1221111111111 12344566778888888888888776543321


Q ss_pred             CC--------CCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 041858          281 GS--------LIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEIL  352 (528)
Q Consensus       281 ~~--------~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  352 (528)
                      ..        +....|+++.+++..++   ++++++.++++.+++||+|||+++++|++|+|++||++|+++|+|+++++
T Consensus       247 ~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~  323 (489)
T PLN02936        247 GEVIEGEEYVNDSDPSVLRFLLASREE---VSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVL  323 (489)
T ss_pred             ccccccccccccCchHHHHHHHhcccc---CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            10        12346899999976543   89999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCC
Q 041858          353 SHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWG  432 (528)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g  432 (528)
                      +.          ..++++++++||||+|||+||||++|+++...||++.++++++||.|||||.|+++.+++||||++| 
T Consensus       324 ~~----------~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~-  392 (489)
T PLN02936        324 QG----------RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVW-  392 (489)
T ss_pred             cC----------CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhC-
Confidence            63          2468999999999999999999999999999999888888889999999999999999999999999 


Q ss_pred             CCCCCcCCCCcCCCCCc--cccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecC
Q 041858          433 KDCLEFKPERWIKDGQF--VSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKN  510 (528)
Q Consensus       433 ~~p~~F~P~Rf~~~~~~--~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  510 (528)
                      +||++|+||||+.++..  .......|+|||.|+|.|||+++|++|+++++++|+++|+++++++.+.....++++.|++
T Consensus       393 ~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  472 (489)
T PLN02936        393 ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTN  472 (489)
T ss_pred             CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCC
Confidence            99999999999964211  1122457999999999999999999999999999999999999876555445456778889


Q ss_pred             cEEEEEEEccccccc
Q 041858          511 GLMVTLKPRLDLDRE  525 (528)
Q Consensus       511 ~~~v~~~~r~~~~~~  525 (528)
                      ++.|++++|...+-.
T Consensus       473 ~~~v~~~~R~~~~~~  487 (489)
T PLN02936        473 GLYMTVSRRRVPDGD  487 (489)
T ss_pred             CeEEEEEeeeCCCCC
Confidence            999999999877643


No 22 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4e-71  Score=544.31  Aligned_cols=451  Identities=19%  Similarity=0.232  Sum_probs=341.8

Q ss_pred             cCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH
Q 041858           43 NRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF  122 (528)
Q Consensus        43 pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~  122 (528)
                      ||||+++|++||++++..  .+++.++.+++++||++|++   ++|+.++|+|+||+++++|+.++...|.+++... ..
T Consensus         1 ppgp~~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~-~~   74 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTI---RTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSK-AL   74 (466)
T ss_pred             CcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEE---EECCEeEEEeCCHHHHHHHHHhcCchhcCCChhh-HH
Confidence            579999999999998854  34788999999999999999   8899999999999999999998777887765443 23


Q ss_pred             HhhhcC--ceeec-CChhHHHHHHhhhhc-cchhhhhHhhHHHHHHHHHHHHHHHHHHHhh--cCCcccHHHHHHHHHHH
Q 041858          123 QDLLGD--GIFNA-DSETWKEQRQMAKSH-MHSSRFMEHSLQTMQDLVQQKLLRLTEKLVK--SGDRFDLQEVLLRFTLD  196 (528)
Q Consensus       123 ~~~~g~--~~~~~-~g~~~~~~R~~~~~~-~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~  196 (528)
                      ..+.|.  +++.. +|+.|+++|+.+.+. ++......+ .+.+++. .+.+.+.+.+...  .++++|+.+.++.+++|
T Consensus        75 ~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~d  152 (466)
T PLN02655         75 TVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRF-RDTRDML-IENMLSGLHALVKDDPHSPVNFRDVFENELFG  152 (466)
T ss_pred             HHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHh-HHHHHHH-HHHHHHHHHhhccccCCCceeHHHHHHHHHHH
Confidence            334443  35554 489999999866654 555555555 5656555 5555555554322  45679999999999999


Q ss_pred             HHHHHHhCCCCCCCcCCCCCch------HHHHHHHHHHHHHHhhcCCccccchhhhhccc-hHHHHHHHHHHHHHHHHHH
Q 041858          197 SICTAALGVDPGCLAIDLPEVP------FAKAFEEATELSLFRFLLPPFIWKPMKLFGLG-YERRLKIAIQIVQDFADKI  269 (528)
Q Consensus       197 vi~~~~fG~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~  269 (528)
                      +++.++||.+++....+.....      +...+............  ...++.+++++.. ..+...+....+.+++...
T Consensus       153 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (466)
T PLN02655        153 LSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDW--RDFFPYLSWIPNKSFETRVQTTEFRRTAVMKAL  230 (466)
T ss_pred             HHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcch--hhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Confidence            9999999998775432211111      11122222211110000  0011223344322 2223333344556778788


Q ss_pred             HHHHHHhhhhcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 041858          270 VSDRRNKLTRLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEIN  349 (528)
Q Consensus       270 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~  349 (528)
                      +++++++...+   ....|+++.+++..+   .++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|++
T Consensus       231 i~~~~~~~~~~---~~~~d~l~~ll~~~~---~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~  304 (466)
T PLN02655        231 IKQQKKRIARG---EERDCYLDFLLSEAT---HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIR  304 (466)
T ss_pred             HHHHHHhhcCC---CCcccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            87777654331   234689999997753   389999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCC
Q 041858          350 EILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMES  429 (528)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~  429 (528)
                      ++.+..          .++.++++++|||+|||+||||++|+++...+|.+.+++.++||.|||||.|+++.+++||||+
T Consensus       305 ~~~~~~----------~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~  374 (466)
T PLN02655        305 EVCGDE----------RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKK  374 (466)
T ss_pred             HHhCCC----------CCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcc
Confidence            998642          3899999999999999999999999999886555555566699999999999999999999999


Q ss_pred             CCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC-cccccceEEee
Q 041858          430 IWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN-VVPKVTTTLYV  508 (528)
Q Consensus       430 ~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~  508 (528)
                      +| +||++|+||||++++. ...+...++|||.|+|.|||++||..|+++++++||++|++++.++.. .....+.++.+
T Consensus       375 ~~-~~p~~F~PeR~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  452 (466)
T PLN02655        375 RW-ENPEEWDPERFLGEKY-ESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQK  452 (466)
T ss_pred             cC-CChhccCccccCCCCc-ccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEee
Confidence            99 9999999999997521 222346899999999999999999999999999999999999976542 33344667788


Q ss_pred             cCcEEEEEEEccc
Q 041858          509 KNGLMVTLKPRLD  521 (528)
Q Consensus       509 ~~~~~v~~~~r~~  521 (528)
                      ++++.|++++|.+
T Consensus       453 ~~~~~~~~~~r~~  465 (466)
T PLN02655        453 LHPLHAHLKPRGS  465 (466)
T ss_pred             cCCcEEEEeecCC
Confidence            8999999999874


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=9.7e-73  Score=563.09  Aligned_cols=454  Identities=29%  Similarity=0.454  Sum_probs=360.7

Q ss_pred             cCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh---hH
Q 041858           43 NRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN---YR  119 (528)
Q Consensus        43 pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~---~~  119 (528)
                      ||||+++|++||++.+.+ ..+++.++.+++++||++|++   +++++++++|+||+++++|+.++...+.....   ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~---~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~   76 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRI---WPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE   76 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEE---eEecccccccccchhhccccccccccccccccccccc
Confidence            689999999999999985 356899999999999999999   88999999999999999999987556655422   22


Q ss_pred             HHHHhhhcCceeecCChhHHHHHHhhhhccchh-hhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH
Q 041858          120 ERFQDLLGDGIFNADSETWKEQRQMAKSHMHSS-RFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSI  198 (528)
Q Consensus       120 ~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~-~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  198 (528)
                      .......+.+++..+++.|+.+|+.+++.|+.. .. .+ .+.+.+. .+.+.+.+.+....++++|+.+.++.+++|++
T Consensus        77 ~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~-~~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i  153 (463)
T PF00067_consen   77 IFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KL-EPLIDEE-AEELIDQLRKKAGSSGPVDLFDWLRRFALDVI  153 (463)
T ss_dssp             HHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HH-HHHHHHH-HHHHHHHHHHTTTSESEEEHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-cc-ccccccc-cccccccccccccccceeeeeccccccccccc
Confidence            222356678999999999999999999999988 44 55 6777777 77788888876555557999999999999999


Q ss_pred             HHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 041858          199 CTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLT  278 (528)
Q Consensus       199 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  278 (528)
                      ++++||.++++.+... ...+.+.+..+..............+++.++++....+...++.+.+.+++.+.++++++...
T Consensus       154 ~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (463)
T PF00067_consen  154 GRVLFGKDFGSLDDED-FEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELD  232 (463)
T ss_dssp             HHHHHSSHHHGTTHHH-HHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             ccccccceeeeccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999876443210 123444444444322111100111122344555566777778889999999999999988776


Q ss_pred             hcCCCCChhhHHHHHHhcc-ccC--CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccc
Q 041858          279 RLGSLIDQSDLLSRLMDTE-EKN--GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHK  355 (528)
Q Consensus       279 ~~~~~~~~~d~l~~ll~~~-~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  355 (528)
                      ..  .....|+++.+++.. +.+  ..+++++++.++..+++||+|||+.+++|++++|++||++|+|+++|++++.+..
T Consensus       233 ~~--~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  310 (463)
T PF00067_consen  233 DG--DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG  310 (463)
T ss_dssp             SS--SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS
T ss_pred             cc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            52  135789999999886 332  2699999999999999999999999999999999999999999999999998533


Q ss_pred             ccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCC
Q 041858          356 KGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDC  435 (528)
Q Consensus       356 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p  435 (528)
                               ..++.+++++||||+|||+||||++|+++....|.+.+++.++||.|||||.|+++.+++|+||++| +||
T Consensus       311 ---------~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~-~dp  380 (463)
T PF00067_consen  311 ---------REITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYF-PDP  380 (463)
T ss_dssp             ---------SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTS-SST
T ss_pred             ---------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence                     4689999999999999999999999999955544444456669999999999999999999999999 999


Q ss_pred             CCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccc--eEEeecCcEE
Q 041858          436 LEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVT--TTLYVKNGLM  513 (528)
Q Consensus       436 ~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~  513 (528)
                      ++|+||||++.+.........|+|||.|+|.|||+++|+.|+++++++||++||++++++.+......  ..+.|+.++.
T Consensus       381 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (463)
T PF00067_consen  381 DEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLK  460 (463)
T ss_dssp             TS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSE
T ss_pred             cccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcE
Confidence            99999999987432345677899999999999999999999999999999999999987655433222  2455666777


Q ss_pred             EEE
Q 041858          514 VTL  516 (528)
Q Consensus       514 v~~  516 (528)
                      |+|
T Consensus       461 ~~~  463 (463)
T PF00067_consen  461 VKF  463 (463)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            765


No 24 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.1e-70  Score=542.67  Aligned_cols=463  Identities=19%  Similarity=0.333  Sum_probs=338.6

Q ss_pred             cccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHc-CCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhH
Q 041858           41 LTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKT-GGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYR  119 (528)
Q Consensus        41 ~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~  119 (528)
                      ..||||+++|++||++++.... ....++....++| |++|.+   ++|+.++|+++||+++++++.++...|++++...
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~-~~~~~~~~~~~~~~g~i~~~---~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~  115 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTR-PRSKYFHLAMKELKTDIACF---NFAGTHTITINSDEIAREAFRERDADLADRPQLS  115 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCC-CcchhHHHHHHHhCCCeEEE---EeCCccEEEECCHHHHHHHHHhCcHhhcCCCCch
Confidence            3568999999999999875321 1123455555555 799999   8999999999999999999988767787775433


Q ss_pred             HHHHhhhcC---ceeec-CChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 041858          120 ERFQDLLGD---GIFNA-DSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTL  195 (528)
Q Consensus       120 ~~~~~~~g~---~~~~~-~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  195 (528)
                      . .. .++.   ++++. +|+.|+++|+++++.|.............+.+ .+.+.+.+.+..+.++++|+.+.+..+++
T Consensus       116 ~-~~-~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  192 (534)
T PLN03018        116 I-ME-TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIE-ADNLIAYIHSMYQRSETVDVRELSRVYGY  192 (534)
T ss_pred             h-hh-hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCceeHHHHHHHHHH
Confidence            2 21 2232   46665 59999999999999886666656534444333 56677777654344567999999999999


Q ss_pred             HHHHHHHhCCCCCCCcCCCC-CchHHHHHHHHHHHH-HHhhcCCcc-----ccchhhhhc-cchHHHHHHHHHHHHHHHH
Q 041858          196 DSICTAALGVDPGCLAIDLP-EVPFAKAFEEATELS-LFRFLLPPF-----IWKPMKLFG-LGYERRLKIAIQIVQDFAD  267 (528)
Q Consensus       196 ~vi~~~~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~p~~-----~~~~~~~~~-~~~~~~~~~~~~~l~~~~~  267 (528)
                      |++++++||.+++..+.... ...+...+....... ......|..     ++.+++++. ....++.....+.+.+++.
T Consensus       193 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  272 (534)
T PLN03018        193 AVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNN  272 (534)
T ss_pred             HHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHH
Confidence            99999999998864322110 111112121111111 101111110     111111111 1223344455667888888


Q ss_pred             HHHHHHHHhhhhcCCCCChhhHHHHHHhccccCC--CCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHH
Q 041858          268 KIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKNG--HLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIR  345 (528)
Q Consensus       268 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~  345 (528)
                      +.++++++............|+++.+++..++++  .+++++++.++..+++||+|||+.+++|++++|+.||++|+|++
T Consensus       273 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~  352 (534)
T PLN03018        273 PIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKAL  352 (534)
T ss_pred             HHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            8888877643321111234689999997654432  38999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccc
Q 041858          346 VEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMA  425 (528)
Q Consensus       346 ~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~  425 (528)
                      +||+++.+..         ..++.+++.+||||+|||+|+||++|+++...+|.+.+++.++||.|||||.|+++.+++|
T Consensus       353 ~Ei~~v~~~~---------~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~  423 (534)
T PLN03018        353 KELDEVVGKD---------RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLG  423 (534)
T ss_pred             HHHHHHhCCC---------CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhc
Confidence            9999998643         4689999999999999999999999999988766666667779999999999999999999


Q ss_pred             cCCCCCCCCCCCcCCCCcCCCCCc-c----ccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCC-Ccc
Q 041858          426 RMESIWGKDCLEFKPERWIKDGQF-V----SENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDH-NVV  499 (528)
Q Consensus       426 ~d~~~~g~~p~~F~P~Rf~~~~~~-~----~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~  499 (528)
                      |||++| +||++|+||||++++.. .    ......|+|||+|+|.|||+++|.+|+++++++|+++|++++.++. +..
T Consensus       424 ~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  502 (534)
T PLN03018        424 RNPKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLS  502 (534)
T ss_pred             CCcccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCC
Confidence            999999 99999999999964211 0    1234679999999999999999999999999999999999987653 222


Q ss_pred             cc-cceEEeecCcEEEEEEEcc
Q 041858          500 PK-VTTTLYVKNGLMVTLKPRL  520 (528)
Q Consensus       500 ~~-~~~~~~~~~~~~v~~~~r~  520 (528)
                      .. .......++++.|++++|.
T Consensus       503 ~~~~~~~~~~p~~~~v~~~~R~  524 (534)
T PLN03018        503 LEEDDASLLMAKPLLLSVEPRL  524 (534)
T ss_pred             ccccccceecCCCeEEEEEecc
Confidence            21 1123345578999999994


No 25 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.5e-70  Score=549.09  Aligned_cols=443  Identities=24%  Similarity=0.417  Sum_probs=343.2

Q ss_pred             ccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHHhhhcCcee
Q 041858           52 LGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQDLLGDGIF  131 (528)
Q Consensus        52 iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~~~~g~~~~  131 (528)
                      +||+..+..  ++++..+.+++++|||||++   ++|+.++++++||+.+++|+..+...|.+...+ ..+....+.+++
T Consensus       142 ~G~l~~i~~--g~~~~~l~~lh~kYGpI~ri---~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~-~~~~~~~g~~l~  215 (633)
T PLN02738        142 KGSISAVRG--EAFFIPLYELFLTYGGIFRL---TFGPKSFLIVSDPSIAKHILRDNSKAYSKGILA-EILEFVMGKGLI  215 (633)
T ss_pred             cCcHHHhcC--chHHHHHHHHHHHhCCEEEE---EeCCCCEEEECCHHHHHHHHhhCcccCCCcchH-HHHhhccCCcee
Confidence            455444422  56889999999999999999   888999999999999999998775667776443 233334577888


Q ss_pred             ecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCc
Q 041858          132 NADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLA  211 (528)
Q Consensus       132 ~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~  211 (528)
                      ..+|+.|+++|+.+++.|+...+..+ .+.+.+. .+.+.+.+++....++++|+.+.++.+++|+|+.++||.+++...
T Consensus       216 ~~dge~wr~rRr~l~p~Fs~~~v~~l-~~~i~~~-v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~  293 (633)
T PLN02738        216 PADGEIWRVRRRAIVPALHQKYVAAM-ISLFGQA-SDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLS  293 (633)
T ss_pred             cCCcHHHHHHHHhccHhhhHHHHHHH-HHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccc
Confidence            89999999999999999999988887 7888777 677777777765667789999999999999999999999987543


Q ss_pred             CCCCCchHHHHHHHHHHHHHHhh--cCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-------CC
Q 041858          212 IDLPEVPFAKAFEEATELSLFRF--LLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRL-------GS  282 (528)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-------~~  282 (528)
                      .+   ..+.+.+...........  .++.+..++.+.++ ...++..+..+.+.++...+++.+++..+..       ..
T Consensus       294 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~-~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~  369 (633)
T PLN02738        294 ND---TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS-PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYM  369 (633)
T ss_pred             cc---hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccc
Confidence            32   133333333322211111  11111111222222 2234444556666666666665544321110       00


Q ss_pred             CCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccc
Q 041858          283 LIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQ  362 (528)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  362 (528)
                      .....|+++.+++..+   .++++++.++++.+++||+|||+.+++|++++|++||++|+|||+|++++++.        
T Consensus       370 ~~~~~dil~~Ll~~~~---~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~--------  438 (633)
T PLN02738        370 NERDPSILHFLLASGD---DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD--------  438 (633)
T ss_pred             ccccchHHHHHHHcCC---CCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC--------
Confidence            1234689999997643   38999999999999999999999999999999999999999999999999863        


Q ss_pred             cCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCC
Q 041858          363 DNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPER  442 (528)
Q Consensus       363 ~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R  442 (528)
                        ..++++++++||||+|||+|+||++|+++...|++.++++ ++||.|||||.|+++.+.+||||++| |||++|+|||
T Consensus       439 --~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~-i~gy~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PER  514 (633)
T PLN02738        439 --RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDM-LGGYPIKRGEDIFISVWNLHRSPKHW-DDAEKFNPER  514 (633)
T ss_pred             --CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCce-ECCEEECCCCEEEecHHHHhCCcccc-CCccccCccc
Confidence              3579999999999999999999999999998888766655 59999999999999999999999999 9999999999


Q ss_pred             cCCCCC--ccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC-cccccceEEeecCcEEEEEEEc
Q 041858          443 WIKDGQ--FVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN-VVPKVTTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       443 f~~~~~--~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r  519 (528)
                      |+.++.  ........|+|||.|+|+|+|++||..|+++++++|+++|+|++.++.+ .......++.|+++++|++++|
T Consensus       515 Wl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        515 WPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             CCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEEC
Confidence            985321  1122456799999999999999999999999999999999999976643 3334457788999999999999


Q ss_pred             cc
Q 041858          520 LD  521 (528)
Q Consensus       520 ~~  521 (528)
                      ..
T Consensus       595 ~~  596 (633)
T PLN02738        595 TK  596 (633)
T ss_pred             CC
Confidence            53


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.8e-70  Score=535.73  Aligned_cols=442  Identities=17%  Similarity=0.231  Sum_probs=341.4

Q ss_pred             hhcccCCCCCCccccchhhhhhh--hhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCCh
Q 041858           39 QKLTNRGPMLWPVLGVLPSMFLH--LNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGK  116 (528)
Q Consensus        39 ~~~~pPGP~~~P~iG~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~  116 (528)
                      .++.||||.++|++||++.+..+  ..+++.++.+++++||++|++   ++|+.++||++||+++++++.++...|....
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~---~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKS---HIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeee---ccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            45567899999999999988542  134788999999999999999   8999999999999999999988766665432


Q ss_pred             hhHHHHHhhhcC-ceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 041858          117 NYRERFQDLLGD-GIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTL  195 (528)
Q Consensus       117 ~~~~~~~~~~g~-~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  195 (528)
                        ......++|. +++..+|+.|+++|+++++.|+..++.....+.+    .+.+.+.++.+ .+++++++.+.+..+++
T Consensus        82 --~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         82 --PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDM----ERYVSESLDSW-RDDPPVLVQDETKKIAF  154 (452)
T ss_pred             --chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHHHhc-cCCCCEEhHHHHHHHHH
Confidence              1223345564 6888899999999999999998877765433333    33333344443 24567999999999999


Q ss_pred             HHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041858          196 DSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRN  275 (528)
Q Consensus       196 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  275 (528)
                      +++++++||.+.+..     ...+.+.+..+..   .....|.       +++.....+..++.+.+.+++.+.|+++++
T Consensus       155 ~vi~~~~~G~~~~~~-----~~~~~~~~~~~~~---~~~~~~~-------~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~  219 (452)
T PLN03141        155 EVLVKALISLEPGEE-----MEFLKKEFQEFIK---GLMSLPI-------KLPGTRLYRSLQAKKRMVKLVKKIIEEKRR  219 (452)
T ss_pred             HHHHHHHcCCCchHH-----HHHHHHHHHHHhh---hHHhCcc-------CCCchHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999764310     1122222222221   1111221       122222334556788999999999988876


Q ss_pred             hhhhcCC--CCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 041858          276 KLTRLGS--LIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILS  353 (528)
Q Consensus       276 ~~~~~~~--~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  353 (528)
                      .......  +....|+++.+++..+  ..+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++++.+
T Consensus       220 ~~~~~~~~~~~~~~d~l~~ll~~~~--~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~  297 (452)
T PLN03141        220 AMKNKEEDETGIPKDVVDVLLRDGS--DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKR  297 (452)
T ss_pred             HHhccCccccCChhhHHHHHHhcCC--CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHh
Confidence            5432110  0124689999997653  34899999999999999999999999999999999999999999999998864


Q ss_pred             ccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCC
Q 041858          354 HKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGK  433 (528)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~  433 (528)
                      ...     ..+..++.+++.+||||+|||+|++|++|+++...|++.+ ++.++||.||||+.|+++.+++||||++| +
T Consensus       298 ~~~-----~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~-d~~l~g~~IPkG~~V~~~~~~~~~d~~~~-~  370 (452)
T PLN03141        298 LKA-----DTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMK-DVEIKGYLIPKGWCVLAYFRSVHLDEENY-D  370 (452)
T ss_pred             ccC-----CCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecC-CeeECCEEECCCCEEEEehHhccCCchhc-C
Confidence            211     1124579999999999999999999999999876665654 55569999999999999999999999999 9


Q ss_pred             CCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEE
Q 041858          434 DCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLM  513 (528)
Q Consensus       434 ~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  513 (528)
                      ||++|+||||+++.    .....|+|||+|+|+|+|++||.+|+++++++|+++|+|++.++...   ...++.|.+++.
T Consensus       371 dP~~F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~~~~~~~~~~~~  443 (452)
T PLN03141        371 NPYQFNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---NFPTVRMKRKLP  443 (452)
T ss_pred             CccccCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---ecccccCCCCce
Confidence            99999999999641    23567999999999999999999999999999999999998765422   224778999999


Q ss_pred             EEEEEccc
Q 041858          514 VTLKPRLD  521 (528)
Q Consensus       514 v~~~~r~~  521 (528)
                      |++++|+.
T Consensus       444 ~~~~~~~~  451 (452)
T PLN03141        444 IWVTRIDD  451 (452)
T ss_pred             EEEEeCCC
Confidence            99999974


No 27 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.6e-70  Score=535.74  Aligned_cols=427  Identities=19%  Similarity=0.276  Sum_probs=334.8

Q ss_pred             cccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHH
Q 041858           41 LTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRE  120 (528)
Q Consensus        41 ~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~  120 (528)
                      ..||||+++|++||+..+..  .+++.++.+++++||++|++   +++++++|+++||+++++++.++...|. . .+..
T Consensus        35 ~~Ppgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~i~~~---~~~~~~~v~v~~p~~~~~vl~~~~~~~~-~-~~~~  107 (463)
T PLN02196         35 PLPPGTMGWPYVGETFQLYS--QDPNVFFASKQKRYGSVFKT---HVLGCPCVMISSPEAAKFVLVTKSHLFK-P-TFPA  107 (463)
T ss_pred             CCCCCCCCCCccchHHHHHh--cCHHHHHHHHHHHhhhhhee---eecCCceEEEcCHHHHHHHHhCCCCccc-c-cCch
Confidence            34578888999999987643  35788999999999999998   8899999999999999999987755553 2 2222


Q ss_pred             HHHhhhc-CceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHH
Q 041858          121 RFQDLLG-DGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSIC  199 (528)
Q Consensus       121 ~~~~~~g-~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  199 (528)
                      ......| .+++..+|+.|+++|+++++.|+.+++..+ .+.+.+. .+.+.+.+     .++++|+.+.++.+++++++
T Consensus       108 ~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~-~~~i~~~-~~~~~~~~-----~~~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        108 SKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNM-VPDIESI-AQESLNSW-----EGTQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             HHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHH-HHHHHHH-HHHHHHcC-----CCCeEEeHHHHHHHHHHHHH
Confidence            2333456 478889999999999999999999988887 5666665 33333332     23468999999999999999


Q ss_pred             HHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 041858          200 TAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTR  279 (528)
Q Consensus       200 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  279 (528)
                      .++||.+....     ...+.+.+......   ...+|       ..++....++..++.+.+.+++.+.++++++..  
T Consensus       181 ~~~fG~~~~~~-----~~~~~~~~~~~~~~---~~~~~-------~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~--  243 (463)
T PLN02196        181 LSIFGKDEVLY-----REDLKRCYYILEKG---YNSMP-------INLPGTLFHKSMKARKELAQILAKILSKRRQNG--  243 (463)
T ss_pred             HHHcCCCCchH-----HHHHHHHHHHHhcc---hhccc-------ccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC--
Confidence            99999864210     11122222111110   00111       112222234566778888888888888776541  


Q ss_pred             cCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccccccc
Q 041858          280 LGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGII  359 (528)
Q Consensus       280 ~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  359 (528)
                          ....|+++.+++..   ..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+..+   
T Consensus       244 ----~~~~d~l~~ll~~~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~---  313 (463)
T PLN02196        244 ----SSHNDLLGSFMGDK---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE---  313 (463)
T ss_pred             ----CCcccHHHHHHhcC---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccc---
Confidence                23568999988643   23899999999999999999999999999999999999999999999999876421   


Q ss_pred             ccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcC
Q 041858          360 QLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFK  439 (528)
Q Consensus       360 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~  439 (528)
                         .++.+++++++++|||+|||+|+||++|++++..|++.++ +.++||.|||||.|+++.+++||||++| +||++|+
T Consensus       314 ---~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d-~~i~g~~IpkGt~v~~~~~~~~rd~~~~-~dP~~F~  388 (463)
T PLN02196        314 ---EGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVED-VEYEGYLIPKGWKVLPLFRNIHHSADIF-SDPGKFD  388 (463)
T ss_pred             ---cCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccc-cccCCEEeCCCCEEEeeHHHhcCCchhc-CCcCccC
Confidence               1356899999999999999999999999999988777655 5559999999999999999999999999 9999999


Q ss_pred             CCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEEc
Q 041858          440 PERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       440 P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (528)
                      ||||++.     .....++|||.|+|.|+|+++|+.|+++++++|+++|++++.+++ .......+..|++++.|+++..
T Consensus       389 PeRfl~~-----~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        389 PSRFEVA-----PKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             hhhhcCC-----CCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceEEcccccCCCCceEEEecC
Confidence            9999853     234679999999999999999999999999999999999997653 2334444567999999998753


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.9e-68  Score=520.69  Aligned_cols=437  Identities=20%  Similarity=0.273  Sum_probs=336.0

Q ss_pred             ccCCCCCCccccchhhhhhhh--hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhH
Q 041858           42 TNRGPMLWPVLGVLPSMFLHL--NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYR  119 (528)
Q Consensus        42 ~pPGP~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~  119 (528)
                      .||||.++|++||++.+....  .+++.++.+++++||++|++   ++++.++|+++||+++++++.++...|.++..  
T Consensus        31 lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~--  105 (472)
T PLN02987         31 LPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMT---HLFGEPTVFSADPETNRFILQNEGKLFECSYP--  105 (472)
T ss_pred             CcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhh---hhcCCCeEEEeCHHHHHHHHhCCCceEEecCc--
Confidence            357999999999998875321  34788899999999999999   88999999999999999999987667755422  


Q ss_pred             HHHHhhhc-CceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH
Q 041858          120 ERFQDLLG-DGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSI  198 (528)
Q Consensus       120 ~~~~~~~g-~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi  198 (528)
                      ......+| +|+++.+|+.|+++|+++.+.++...+..+..    +.+.+.+...++.+   ++++++.+.+++++++++
T Consensus       106 ~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~v~~~~~~~~~t~~vi  178 (472)
T PLN02987        106 GSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLL----LDIDRLIRFNLDSW---SSRVLLMEEAKKITFELT  178 (472)
T ss_pred             HHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHH----HHHHHHHHHHHHhh---ccceehHHHHHHHHHHHH
Confidence            12224456 57888999999999999876444444444321    12233333334433   246999999999999999


Q ss_pred             HHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 041858          199 CTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLT  278 (528)
Q Consensus       199 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  278 (528)
                      ++++||.+.+..     ...+.+.+.......   ...+   +++   + ....++..++++++.+++.+.++++++...
T Consensus       179 ~~~~fg~~~~~~-----~~~~~~~~~~~~~~~---~~~~---~p~---l-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  243 (472)
T PLN02987        179 VKQLMSFDPGEW-----TESLRKEYVLVIEGF---FSVP---LPL---F-STTYRRAIQARTKVAEALTLVVMKRRKEEE  243 (472)
T ss_pred             HHHHcCCCChHH-----HHHHHHHHHHHHhhh---hcCC---CcC---C-CchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999765311     112222222221111   1111   011   1 134566778899999999999999876543


Q ss_pred             hcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccc
Q 041858          279 RLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGI  358 (528)
Q Consensus       279 ~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  358 (528)
                      .+  .....|+++.+++..+   .++++++++++..+++||+|||+.+++|++++|++||++|+++++|++++.+..+  
T Consensus       244 ~~--~~~~~d~l~~ll~~~~---~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~--  316 (472)
T PLN02987        244 EG--AEKKKDMLAALLASDD---GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS--  316 (472)
T ss_pred             cc--CcccccHHHHHHhcCC---CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC--
Confidence            21  1235699999997643   3899999999999999999999999999999999999999999999999875321  


Q ss_pred             cccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCc
Q 041858          359 IQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEF  438 (528)
Q Consensus       359 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F  438 (528)
                          .+..++++++.+|||++|||+|+||++|+++...|++.++ +.++||.|||||.|+++.+++||||++| +||++|
T Consensus       317 ----~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d-~~~~G~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F  390 (472)
T PLN02987        317 ----DSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTD-IEVKGYTIPKGWKVFASFRAVHLDHEYF-KDARTF  390 (472)
T ss_pred             ----CCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCC-eeECCEEECCCCEEEEehHHhhCCcccC-CCcccc
Confidence                1245789999999999999999999999998766666554 5569999999999999999999999999 999999


Q ss_pred             CCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEE
Q 041858          439 KPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKP  518 (528)
Q Consensus       439 ~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  518 (528)
                      +||||+++... ......++|||+|+|.|||+++|..|++++++.|+++|++++.++.+..+  ..++.|.+++.+++++
T Consensus       391 ~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~p~~~~~~~~~~  467 (472)
T PLN02987        391 NPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FPTTRTQKRYPINVKR  467 (472)
T ss_pred             CcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cccccCCCCceEEEEe
Confidence            99999975221 22346799999999999999999999999999999999999987665433  4488899999999999


Q ss_pred             ccc
Q 041858          519 RLD  521 (528)
Q Consensus       519 r~~  521 (528)
                      |+.
T Consensus       468 r~~  470 (472)
T PLN02987        468 RDV  470 (472)
T ss_pred             ccc
Confidence            964


No 29 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.9e-68  Score=527.99  Aligned_cols=441  Identities=19%  Similarity=0.270  Sum_probs=336.7

Q ss_pred             cccCCCCCCccccchhhhhhhh--hhHHHHHHHHHHHcCC--eeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCCh
Q 041858           41 LTNRGPMLWPVLGVLPSMFLHL--NNMYDWATEALIKTGG--TFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGK  116 (528)
Q Consensus        41 ~~pPGP~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~yG~--v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~  116 (528)
                      +.||||+++|++|+++.+....  .+++.++.+++++||+  +|++   ++++.+.++++||+++++|+.++ +.|.++.
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~---~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKA---FMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceee---ecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            4468999999999999886532  3578899999999997  6887   78999999999999999999875 5565442


Q ss_pred             hhHHHHHhhhcC-ceeecCChhHHHHHHhhhhccc-hhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 041858          117 NYRERFQDLLGD-GIFNADSETWKEQRQMAKSHMH-SSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFT  194 (528)
Q Consensus       117 ~~~~~~~~~~g~-~~~~~~g~~~~~~R~~~~~~~~-~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  194 (528)
                      .. ... ..+|. +++..+|+.|+++|+.+++.|+ .+++..+ .+.+.+.+ +.+.+.   +.. ++.+|+.+.++.++
T Consensus       118 ~~-~~~-~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~-~~~i~~~v-~~~~~~---~~~-~~~v~~~~~~~~~~  189 (490)
T PLN02302        118 PE-STV-ELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTY-IPYIEENV-KSCLEK---WSK-MGEIEFLTELRKLT  189 (490)
T ss_pred             ch-hHH-HHhccccccccCcHHHHHHHHHHHhccCCHHHHHHH-HHHHHHHH-HHHHHH---hcC-CCCEehHHHHHHHH
Confidence            21 122 24454 4566799999999999999995 5667766 67776663 333333   322 34599999999999


Q ss_pred             HHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHH
Q 041858          195 LDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRR  274 (528)
Q Consensus       195 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  274 (528)
                      ++++++++||.+.+...     ..+.+.+.......   ...+.       .++....++..++.+.+.+++.+.+++++
T Consensus       190 ~~vi~~~~~G~~~~~~~-----~~~~~~~~~~~~~~---~~~~~-------~~p~~~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        190 FKIIMYIFLSSESELVM-----EALEREYTTLNYGV---RAMAI-------NLPGFAYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHHcCCCChHHH-----HHHHHHHHHHHHHh---hhCCc-------CCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998654211     11212111111111   01110       11112223444567788888988888887


Q ss_pred             HhhhhcCCCCChhhHHHHHHhccccC-CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 041858          275 NKLTRLGSLIDQSDLLSRLMDTEEKN-GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILS  353 (528)
Q Consensus       275 ~~~~~~~~~~~~~d~l~~ll~~~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  353 (528)
                      +....+. .....|+++.+++..+++ ..+++++++.++..+++||+|||+.+++|++++|++||++|+|+++|++++.+
T Consensus       255 ~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~  333 (490)
T PLN02302        255 NSRKQNI-SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAK  333 (490)
T ss_pred             HhhhccC-CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Confidence            6543211 124579999999875433 35899999999999999999999999999999999999999999999999986


Q ss_pred             ccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCC
Q 041858          354 HKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGK  433 (528)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~  433 (528)
                      ...     .....++++++++||||+|||+|+||++|+++...|++.+ ++.++||.||||+.|+++.+++||||++| +
T Consensus       334 ~~~-----~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~-d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~-~  406 (490)
T PLN02302        334 KRP-----PGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKT-DVEVNGYTIPKGWKVLAWFRQVHMDPEVY-P  406 (490)
T ss_pred             cCC-----CCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccC-CEeECCEEECCCCEEEeeHHHhcCCcccC-C
Confidence            421     0112378999999999999999999999999988777665 56669999999999999999999999999 9


Q ss_pred             CCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEE
Q 041858          434 DCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLM  513 (528)
Q Consensus       434 ~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  513 (528)
                      ||++|+||||++++    .....++|||+|+|.|+|+++|..|+++++++|+++|++++.++. ........+.|.+++.
T Consensus       407 dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~p~~~~~  481 (490)
T PLN02302        407 NPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVMYLPHPRPKDNCL  481 (490)
T ss_pred             CccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-CcceeCCCCCCCCCce
Confidence            99999999998642    244679999999999999999999999999999999999987543 2222233478899999


Q ss_pred             EEEEEccc
Q 041858          514 VTLKPRLD  521 (528)
Q Consensus       514 v~~~~r~~  521 (528)
                      +++++|..
T Consensus       482 ~~~~~~~~  489 (490)
T PLN02302        482 ARITKVAS  489 (490)
T ss_pred             EEEEeccC
Confidence            99999874


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-67  Score=471.63  Aligned_cols=437  Identities=21%  Similarity=0.317  Sum_probs=350.9

Q ss_pred             CCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHHhhhc
Q 041858           48 LWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQDLLG  127 (528)
Q Consensus        48 ~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~~~~g  127 (528)
                      ++||+|+...|+++   +.+++++.++|||+||++   .++|+.+.++.+|+....+++.....+.....+.......+|
T Consensus        39 wiP~lG~a~~fgk~---P~eFl~~~~~K~GdVFTv---~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg  112 (486)
T KOG0684|consen   39 WIPWLGSALAFGKD---PLEFLRECRKKYGDVFTV---LLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFG  112 (486)
T ss_pred             CcchhhHHHHhccC---HHHHHHHHHHhcCCeEEE---EEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcC
Confidence            47999999999887   999999999999999999   899999999999999999998764566555555566667888


Q ss_pred             Cceee-cCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCC
Q 041858          128 DGIFN-ADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVD  206 (528)
Q Consensus       128 ~~~~~-~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~  206 (528)
                      +|+.. .++.....+.+.+...+...+++++ .+.+.+++.+.+...   +.+.+.+..+.+.+..+.+.+.-...||+.
T Consensus       113 ~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~-~e~m~~el~~~f~~~---~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~  188 (486)
T KOG0684|consen  113 KGVVYDVPNHVMMEQKKFFKSALGGVALKSL-VELMLEELHAYFETS---LGESGETDGLYTFCRLIIFTASRLLLGGEV  188 (486)
T ss_pred             CCccccCCCchHHHHHHHHHHHhchhhHHHH-HHHHHHHHHHHHhcc---cccccchhHhhhhhHHHhhhhHHHhhhhhh
Confidence            87764 4788889999999999999999998 566655544444441   333555556777777777777777777765


Q ss_pred             CCCCcCCCCCchHHHHHHHHHHHHH-HhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q 041858          207 PGCLAIDLPEVPFAKAFEEATELSL-FRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLID  285 (528)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  285 (528)
                      ....+.     +....+.++..... ....+|       .++|....++..++++.+.+.+...+.++++..++     .
T Consensus       189 r~~~d~-----~~a~l~~dLd~~F~~~d~~FP-------~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-----~  251 (486)
T KOG0684|consen  189 RDQLDA-----DVAKLYHDLDQGFQPFDFLFP-------YNLPIPLLRRRDRARKKISKIFSKIILDRRASISK-----W  251 (486)
T ss_pred             hhhhcc-----hHHHHHHHHhccccchHhhcc-------cCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcccc-----c
Confidence            543222     33344444433221 222222       16666778888899999999999999999987543     5


Q ss_pred             hhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCC
Q 041858          286 QSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNV  365 (528)
Q Consensus       286 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  365 (528)
                      ..|+++.+++.-+.+...+++|++..++.++|||+.|++.|.+|++++|++|||+++.+++|+++++|+..        .
T Consensus       252 ~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~--------~  323 (486)
T KOG0684|consen  252 DNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK--------E  323 (486)
T ss_pred             cHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC--------C
Confidence            67999999983333345899999999999999999999999999999999999999999999999998664        4


Q ss_pred             CCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCC---CeeecCCCEEEEeccccccCCCCCCCCCCCcCCCC
Q 041858          366 IFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPD---GTMVKKGARVLYCTYSMARMESIWGKDCLEFKPER  442 (528)
Q Consensus       366 ~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~---g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R  442 (528)
                      .++++.+++||.|++||+|||||+||.+...|.+.+|.++.+   .|.||+|..|.+++..+|+||++| +||+.|+|+|
T Consensus       324 ~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif-~dp~~Fk~dR  402 (486)
T KOG0684|consen  324 KLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIF-PDPEDFKPDR  402 (486)
T ss_pred             CCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCcccc-CChhhCChhh
Confidence            599999999999999999999999999999999988887755   399999999999999999999999 9999999999


Q ss_pred             cCCCCCcc--ccC--CccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCccc-ccceEEeecCcEEEEEE
Q 041858          443 WIKDGQFV--SEN--QFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVP-KVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       443 f~~~~~~~--~~~--~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~  517 (528)
                      |++++...  ...  .+.+||||+|+|.|||++||.+|+|.++..+|++||+++.++.-+.. -......|.+++.++.+
T Consensus       403 f~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK  482 (486)
T KOG0684|consen  403 FLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYK  482 (486)
T ss_pred             ccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEe
Confidence            99763222  112  23569999999999999999999999999999999999998632222 22346678889999999


Q ss_pred             Ecc
Q 041858          518 PRL  520 (528)
Q Consensus       518 ~r~  520 (528)
                      .|+
T Consensus       483 ~R~  485 (486)
T KOG0684|consen  483 RRP  485 (486)
T ss_pred             ecC
Confidence            886


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1e-59  Score=456.37  Aligned_cols=406  Identities=16%  Similarity=0.211  Sum_probs=288.8

Q ss_pred             ccCCCCCCccccchhhhhhhh--hhHHHHHHHHHHHcCC-eeEEEeeecCCcce-------EEEcCcccHHHHHhc----
Q 041858           42 TNRGPMLWPVLGVLPSMFLHL--NNMYDWATEALIKTGG-TFYYRGVWMGGAHG-------ILTADPSNIEYMVKT----  107 (528)
Q Consensus        42 ~pPGP~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~yG~-v~~~~~~~~~~~~~-------vvv~~p~~i~~il~~----  107 (528)
                      .|||+.+||++|+++++.++.  .++..++.+.++|||+ ||++   .++|.|+       |+++||++++.++.+    
T Consensus        18 ~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~---~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         18 EIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRV---NMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEe---cCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            368999999999999887642  4567999999999999 9999   7778655       999999999999975    


Q ss_pred             CCCCCCCChhhHHHHHhhhc-C---ceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 041858          108 NFSNFPKGKNYRERFQDLLG-D---GIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDR  183 (528)
Q Consensus       108 ~~~~f~~~~~~~~~~~~~~g-~---~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~  183 (528)
                      +...|..  .+..... ++| +   +++..+|+.|+++|+++.+.|+ ..+..+ .+.+.+.+.+.+ +.|......+++
T Consensus        95 ~~~~~~~--~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~-~~~m~~~~~~~~-~~w~~~~~~~~~  168 (480)
T PLN02648         95 KRDVFTG--TYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRF-IPEFRAAFAELF-DTWEAELAKKGK  168 (480)
T ss_pred             cccccee--eeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhh-hhHHHHHHHHHH-HHHHHHHhhCCC
Confidence            3233433  2333343 667 4   6677789999999999999998 466776 788887744444 445443234556


Q ss_pred             ccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhh--------hhccchHHHH
Q 041858          184 FDLQEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMK--------LFGLGYERRL  255 (528)
Q Consensus       184 vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--------~~~~~~~~~~  255 (528)
                      +|+.+.++.+++|++++++||.+.+...   ....+.........    ....|.....+..        .++.+.. ..
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~~---l~~~~~~~~~~~~~----~~~~p~~~~~l~~~~~~~i~~~~~~~~~-~~  240 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSETA---LGSDGPALIQKWLA----LQLAPLASTGLPHVLEELLLHTFPLPFF-LV  240 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchhh---hccchhHHHHHHHH----HHhhHHHHcCchHHHHHHhhcccCCchh-hh
Confidence            9999999999999999999998665310   11122222221111    0011100000000        0000000 00


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHh-hheechhchHHHHHHHHHHH
Q 041858          256 KIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVS-FILAGRDTTSVALTWFFWLL  334 (528)
Q Consensus       256 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L  334 (528)
                      .+..+.+.+++.                    +.++.+++..+++ .+++++++++++. +.+++++|++++++|++|+|
T Consensus       241 ~~~~~~~~~~~~--------------------~~~~~ll~~~~~~-~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L  299 (480)
T PLN02648        241 KSDYDKLYDFFR--------------------ASATEALDLAEKF-GISREEALHNLLFVLGFNAFGGFKIFFPALLKWV  299 (480)
T ss_pred             hccHHHHHHHHH--------------------HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            011111111111                    1122333322222 3999999998875 44667777888999999999


Q ss_pred             hhChH-HHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccC---CCee
Q 041858          335 HKNLE-VETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFP---DGTM  410 (528)
Q Consensus       335 ~~~P~-~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~---~g~~  410 (528)
                      ++||+ +|+++++|++++.+..        +..++++++++||||++||+|+||++|+++...|++.+|.++.   +||.
T Consensus       300 ~~~p~~v~~klr~Ei~~~~~~~--------~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~  371 (480)
T PLN02648        300 GRAGEELQARLAEEVRSAVKAG--------GGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFE  371 (480)
T ss_pred             HcCCHHHHHHHHHHHHHHhccC--------CCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEE
Confidence            99995 9999999999997532        1468999999999999999999999999999998877665553   3799


Q ss_pred             ecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCcccccc---------CCCCcccccHHHHHHHHHHHH
Q 041858          411 VKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVF---------NAGPRLCLGKKFAYMQMKMVA  481 (528)
Q Consensus       411 ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~F---------G~G~r~C~G~~~A~~~~~~~l  481 (528)
                      ||||+.|+++.+.+||||++| +||++|+|+||+++...   ....+++|         |+|+|.|||++||+.|+++++
T Consensus       372 IpkG~~V~~~~~~~hrdp~~~-~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~l  447 (480)
T PLN02648        372 IKKGEMLFGYQPLVTRDPKVF-DRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFV  447 (480)
T ss_pred             ECCCCEEEEChHHHhCCcccC-CCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHH
Confidence            999999999999999999999 99999999999864211   12234444         677899999999999999999


Q ss_pred             HHHhhcee-EEeeCCCC
Q 041858          482 ASILLRYS-VKVDEDHN  497 (528)
Q Consensus       482 ~~ll~~f~-~~~~~~~~  497 (528)
                      ++|+++|+ +++.++..
T Consensus       448 a~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        448 AELFLRYDSFEIEVDTS  464 (480)
T ss_pred             HHHHHHhCEEeecCCcc
Confidence            99999998 99977653


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.6e-53  Score=408.73  Aligned_cols=380  Identities=23%  Similarity=0.332  Sum_probs=297.7

Q ss_pred             HHHHHHHHHHcCCeeEEEeeecCCc--ceEEEcCcccHHHHHhcCC--CCCCCChhhHHHHHhhhcCc-eeecCChhHHH
Q 041858           66 YDWATEALIKTGGTFYYRGVWMGGA--HGILTADPSNIEYMVKTNF--SNFPKGKNYRERFQDLLGDG-IFNADSETWKE  140 (528)
Q Consensus        66 ~~~~~~~~~~yG~v~~~~~~~~~~~--~~vvv~~p~~i~~il~~~~--~~f~~~~~~~~~~~~~~g~~-~~~~~g~~~~~  140 (528)
                      ......+.+.||..+..+   ..++  ..+++++++.++++++++.  ................+|.+ ++..+|+.|.+
T Consensus        25 ~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r  101 (411)
T COG2124          25 RFFLERAEDPYGDYFTLR---LPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhHHHHhCCCchhhhhh---ccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHH
Confidence            445566777888877763   3333  3899999999999998752  11111111111133556655 88899999999


Q ss_pred             HHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHH
Q 041858          141 QRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFA  220 (528)
Q Consensus       141 ~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~  220 (528)
                      +||++++.|+++.+..+ .+.+.+.+.+.+.+.  .  .. +.+++.+.+..+++++|+ .+||.+.+..      ..+.
T Consensus       102 ~Rkl~~~~F~~~~~~~~-~~~i~~~~~~~~~~~--~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~------~~~~  168 (411)
T COG2124         102 LRKLLAPAFTPRALRGY-RPLIREIADRLLDDL--W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR------PQLL  168 (411)
T ss_pred             HHHHhccccCHHHHHHH-HHHHHHHHHHHHHhc--c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH------HHHH
Confidence            99999999999999998 788877744344443  2  22 678999999999999999 9999875511      1111


Q ss_pred             HHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhccccC
Q 041858          221 KAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKN  300 (528)
Q Consensus       221 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  300 (528)
                      .........     ..+       ...+.....+..++...+.+++..+|++++.        ....|+++.++...+++
T Consensus       169 ~~~~~~~~~-----~~~-------~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~--------~~~~dlls~l~~a~~~~  228 (411)
T COG2124         169 RWSDALLLR-----LDP-------DLGPEEPWRRARAARRELDAYLRALIAERRA--------APRDDLLSLLLSAEDDG  228 (411)
T ss_pred             HHHHHHHhc-----cCc-------ccCCcccHHHHHHHHHHHHHHHHHHHHHhcc--------CCcccHHHHHHHHhhCC
Confidence            111111111     001       1111233567788999999999999999983        36789999999888776


Q ss_pred             C-CCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHH
Q 041858          301 G-HLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLH  379 (528)
Q Consensus       301 ~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~  379 (528)
                      + .+|++||.++++.+++||+|||+++++|++|.|++||++++++++|.+.                         ||++
T Consensus       229 ~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-------------------------~~~~  283 (411)
T COG2124         229 GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-------------------------PLLE  283 (411)
T ss_pred             CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-------------------------HHHH
Confidence            5 5999999999999999999999999999999999999999999998763                         6899


Q ss_pred             HHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCccccc
Q 041858          380 AALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAV  459 (528)
Q Consensus       380 a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~  459 (528)
                      ++|+|+||++||++. .+|++.++++++|+.||||+.|+++.+++||||++| +||++|+|+||.          +.|+|
T Consensus       284 ~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f-~~P~~F~p~R~~----------~~~l~  351 (411)
T COG2124         284 AVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVF-PDPDEFDPERFN----------NAHLP  351 (411)
T ss_pred             HHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhC-CChhhcCCCCCC----------CCCcC
Confidence            999999999999999 778888888889999999999999999999999999 999999999995          56999


Q ss_pred             cCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEEc
Q 041858          460 FNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       460 FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (528)
                      ||+|+|.|+|..||.+|++++++.++++|++....+ ........+..+.++..+.++.+
T Consensus       352 FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         352 FGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCccccccccCCCcceeeeecC
Confidence            999999999999999999999999999999988765 23333344556666666666654


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=58.36  E-value=34  Score=21.35  Aligned_cols=42  Identities=12%  Similarity=0.006  Sum_probs=34.3

Q ss_pred             hHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHH
Q 041858          307 YYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEI  348 (528)
Q Consensus       307 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei  348 (528)
                      ++...+..++-.|.|-.+..++-.+.+..-||+....+-+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455667777778888888888888888888999988887776


No 34 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=55.18  E-value=9  Score=26.98  Aligned_cols=9  Identities=44%  Similarity=1.032  Sum_probs=6.5

Q ss_pred             CCCCCcccc
Q 041858           45 GPMLWPVLG   53 (528)
Q Consensus        45 GP~~~P~iG   53 (528)
                      .|-.-|+||
T Consensus        63 rPIYrPvI~   71 (94)
T PF05393_consen   63 RPIYRPVIG   71 (94)
T ss_pred             CCccccccc
Confidence            455778888


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=54.72  E-value=13  Score=24.13  Aligned_cols=21  Identities=24%  Similarity=0.158  Sum_probs=16.3

Q ss_pred             HHHHHhhChHHHHHHHHHHHH
Q 041858          330 FFWLLHKNLEVETKIRVEINE  350 (528)
Q Consensus       330 ~l~~L~~~P~~~~~l~~Ei~~  350 (528)
                      .+.||.+||++.+++.+.=.+
T Consensus         5 iV~YLv~nPevl~kl~~g~as   25 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEAS   25 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCee
Confidence            467999999999998664333


No 36 
>PF15202 Adipogenin:  Adipogenin
Probab=52.11  E-value=35  Score=22.64  Aligned_cols=23  Identities=9%  Similarity=0.099  Sum_probs=13.1

Q ss_pred             ccchhhhhHHHHHHHHHHHHHHH
Q 041858            4 TRKLLFLVSDWFYAHICLWDIAA   26 (528)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~   26 (528)
                      .++.-|++.+|+-++..+++.++
T Consensus        10 ndltfsflvfwlclpv~lllfl~   32 (81)
T PF15202_consen   10 NDLTFSFLVFWLCLPVGLLLFLL   32 (81)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHH
Confidence            45666777778755554443333


No 37 
>PF06716 DUF1201:  Protein of unknown function (DUF1201);  InterPro: IPR009591 This entry consists of several Beet yellows virus (BYV) putative membrane-binding proteins of around 54 residues in length. The function of this currently unknown.
Probab=51.91  E-value=52  Score=19.92  Aligned_cols=18  Identities=28%  Similarity=0.137  Sum_probs=7.2

Q ss_pred             chhhhhHHHHHHHHHHHH
Q 041858            6 KLLFLVSDWFYAHICLWD   23 (528)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~   23 (528)
                      .+.+.+.+=|...+++++
T Consensus         4 vLRs~L~~~F~~lIC~Fl   21 (54)
T PF06716_consen    4 VLRSYLLLAFGFLICLFL   21 (54)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            344444433433343333


No 38 
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=44.81  E-value=50  Score=23.00  Aligned_cols=29  Identities=17%  Similarity=0.075  Sum_probs=12.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041858           13 DWFYAHICLWDIAAAASGLFILSCICQKL   41 (528)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   41 (528)
                      .+|.+.-++..+++++.+..+++|..+++
T Consensus         3 ~~fl~~Pliif~ifVap~wl~lHY~~k~~   31 (75)
T TIGR02976         3 IFFLAIPLIIFVIFVAPLWLILHYRSKRK   31 (75)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            34433333333444444444445543433


No 39 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=43.92  E-value=86  Score=20.16  Aligned_cols=9  Identities=22%  Similarity=0.165  Sum_probs=5.7

Q ss_pred             hcccCCCCC
Q 041858           40 KLTNRGPML   48 (528)
Q Consensus        40 ~~~pPGP~~   48 (528)
                      ---||||++
T Consensus        53 ifGPPGpp~   61 (62)
T COG4459          53 IFGPPGPPG   61 (62)
T ss_pred             HhCCCCCCC
Confidence            444678875


No 40 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=40.21  E-value=23  Score=27.67  Aligned_cols=23  Identities=30%  Similarity=0.553  Sum_probs=17.1

Q ss_pred             CcccccHHHHHHHHHHHHHHHhh
Q 041858          464 PRLCLGKKFAYMQMKMVAASILL  486 (528)
Q Consensus       464 ~r~C~G~~~A~~~~~~~l~~ll~  486 (528)
                      .-.|.|+.||+..+-.++.+|+.
T Consensus        17 qyN~~gKKFsE~QiN~FIs~lIt   39 (148)
T PF09201_consen   17 QYNCLGKKFSETQINAFISHLIT   39 (148)
T ss_dssp             EEETTS----HHHHHHHHHHHHH
T ss_pred             EecccchHHHHHHHHHHHHHHhc
Confidence            35899999999999999999986


No 41 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=36.31  E-value=12  Score=31.95  Aligned_cols=44  Identities=11%  Similarity=0.130  Sum_probs=29.6

Q ss_pred             cChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEE
Q 041858          374 KMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLY  419 (528)
Q Consensus       374 ~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~  419 (528)
                      .-....|||.|+.-...-.  ..|-...++..++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs--~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS--RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC--EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3456788999998765322  2233334555569999999998865


No 42 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=34.39  E-value=27  Score=23.49  Aligned_cols=16  Identities=13%  Similarity=0.347  Sum_probs=13.1

Q ss_pred             cChhHHHHHhhhccCC
Q 041858          374 KMVYLHAALSESLRLY  389 (528)
Q Consensus       374 ~l~~l~a~i~E~lRl~  389 (528)
                      +.-+++.+|+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3458999999999974


No 43 
>PHA02902 putative IMV membrane protein; Provisional
Probab=34.26  E-value=1.1e+02  Score=20.31  Aligned_cols=21  Identities=10%  Similarity=-0.296  Sum_probs=9.6

Q ss_pred             HHHHHHHhhhhccc-CCCCCCc
Q 041858           30 GLFILSCICQKLTN-RGPMLWP   50 (528)
Q Consensus        30 ~~~~~~~~~~~~~p-PGP~~~P   50 (528)
                      .+++-.|.+++..| |+-...+
T Consensus        18 lliya~YrR~kci~sP~~~d~~   39 (70)
T PHA02902         18 LLIYAAYKRYKCIPSPDDRDER   39 (70)
T ss_pred             HHHHHHHHHhcCCCCCCCcccc
Confidence            33334455555555 3333333


No 44 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=32.98  E-value=1.1e+02  Score=29.92  Aligned_cols=8  Identities=13%  Similarity=0.185  Sum_probs=5.6

Q ss_pred             HcCCeeEE
Q 041858           75 KTGGTFYY   82 (528)
Q Consensus        75 ~yG~v~~~   82 (528)
                      +||.|++-
T Consensus       222 rfg~V~Ka  229 (534)
T KOG3653|consen  222 RFGCVWKA  229 (534)
T ss_pred             ccceeehh
Confidence            67777764


No 45 
>PF08693 SKG6:  Transmembrane alpha-helix domain;  InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=31.51  E-value=27  Score=20.76  Aligned_cols=14  Identities=7%  Similarity=0.062  Sum_probs=5.2

Q ss_pred             HHHHHHHHHHHHHH
Q 041858           23 DIAAAASGLFILSC   36 (528)
Q Consensus        23 ~~~~~~~~~~~~~~   36 (528)
                      +++++++++++++|
T Consensus        23 vI~~vl~~~l~~~~   36 (40)
T PF08693_consen   23 VIIIVLGAFLFFWY   36 (40)
T ss_pred             HHHHHHHHHhheEE
Confidence            33333333333333


No 46 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=31.42  E-value=22  Score=22.53  Aligned_cols=9  Identities=44%  Similarity=0.984  Sum_probs=8.0

Q ss_pred             ccCCCCccc
Q 041858          459 VFNAGPRLC  467 (528)
Q Consensus       459 ~FG~G~r~C  467 (528)
                      +||-|.|.|
T Consensus        13 kfg~GsrsC   21 (56)
T KOG3506|consen   13 KFGQGSRSC   21 (56)
T ss_pred             ccCCCCcce
Confidence            599999998


No 47 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.13  E-value=1e+02  Score=23.26  Aligned_cols=10  Identities=30%  Similarity=0.242  Sum_probs=6.2

Q ss_pred             Cccccchhhh
Q 041858           49 WPVLGVLPSM   58 (528)
Q Consensus        49 ~P~iG~~~~~   58 (528)
                      -|+.||+...
T Consensus        46 ~p~YgNL~~~   55 (107)
T PF15330_consen   46 DPCYGNLELQ   55 (107)
T ss_pred             Cccccccccc
Confidence            5777776543


No 48 
>PF10915 DUF2709:  Protein of unknown function (DUF2709);  InterPro: IPR024484 Members of this family appear restricted to Chlamydiales. Their function is unknown.
Probab=29.49  E-value=2.2e+02  Score=23.90  Aligned_cols=57  Identities=19%  Similarity=0.093  Sum_probs=33.2

Q ss_pred             CccccchhhhhhhhhhHHHHHHHHHHHcCC-eeEEEeeecCCcceEEEcCcccHHHHHhcC
Q 041858           49 WPVLGVLPSMFLHLNNMYDWATEALIKTGG-TFYYRGVWMGGAHGILTADPSNIEYMVKTN  108 (528)
Q Consensus        49 ~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~~~~vvv~~p~~i~~il~~~  108 (528)
                      +|+-|..+.=-.+ .++...+.+|..+... .-++.|  +.-+++.|--||+.|+.-....
T Consensus        90 CPFTGKVF~DNt~-~nPQDAIYDWvSkCPeN~ER~~G--~rVKRF~VSeDPevIk~Yi~~~  147 (238)
T PF10915_consen   90 CPFTGKVFGDNTH-PNPQDAIYDWVSKCPENTERQGG--VRVKRFFVSEDPEVIKEYIVPR  147 (238)
T ss_pred             cCCcCccccCCCC-CChHHHHHHHHhhCCccchhccC--eEEEEEeecCCHHHHHHhccCC
Confidence            6888876532111 3466677777666543 222211  0113567777999999988554


No 49 
>COG3295 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.43  E-value=90  Score=26.32  Aligned_cols=38  Identities=29%  Similarity=0.604  Sum_probs=21.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccc
Q 041858           13 DWFYAHICLWDIAAAASGLFILSCICQKLTNRGPMLWPVLGV   54 (528)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPGP~~~P~iG~   54 (528)
                      .||.-+..++.+++++..+.++. +..+   +.+.+||++|-
T Consensus       163 ~wfiDl~AvallvlaLTgL~ll~-lh~k---~R~~~W~lvGl  200 (213)
T COG3295         163 LWFIDLLAVALLVLALTGLALLV-LHTK---RRRVGWPLVGL  200 (213)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hhcC---cccccceeecH
Confidence            34655555555555554444444 2222   24578999983


No 50 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=28.57  E-value=1.1e+02  Score=23.86  Aligned_cols=25  Identities=4%  Similarity=-0.253  Sum_probs=10.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH
Q 041858           11 VSDWFYAHICLWDIAAAASGLFILS   35 (528)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~   35 (528)
                      +..+..+..+..++++.++++++++
T Consensus        65 ~i~~Ii~gv~aGvIg~Illi~y~ir   89 (122)
T PF01102_consen   65 AIIGIIFGVMAGVIGIILLISYCIR   89 (122)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeehhHHHHHHHHHHHHHHHHHHH
Confidence            4444434444444443333333333


No 51 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=28.03  E-value=1.1e+02  Score=24.06  Aligned_cols=16  Identities=13%  Similarity=0.268  Sum_probs=7.0

Q ss_pred             HHHHHHHHHHhhhhcc
Q 041858           27 AASGLFILSCICQKLT   42 (528)
Q Consensus        27 ~~~~~~~~~~~~~~~~   42 (528)
                      .+++++++.+++.+++
T Consensus        41 liiiiivli~lcssRK   56 (189)
T PF05568_consen   41 LIIIIIVLIYLCSSRK   56 (189)
T ss_pred             HHHHHHHHHHHHhhhh
Confidence            3334444445544433


No 52 
>COG4818 Predicted membrane protein [Function unknown]
Probab=27.55  E-value=1.4e+02  Score=21.79  Aligned_cols=9  Identities=33%  Similarity=0.623  Sum_probs=6.5

Q ss_pred             CCccccchh
Q 041858           48 LWPVLGVLP   56 (528)
Q Consensus        48 ~~P~iG~~~   56 (528)
                      .+|++|+.-
T Consensus        88 KlPv~GdiA   96 (105)
T COG4818          88 KLPVVGDIA   96 (105)
T ss_pred             cCceechHH
Confidence            578888764


No 53 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=27.53  E-value=88  Score=22.83  Aligned_cols=30  Identities=17%  Similarity=0.151  Sum_probs=23.8

Q ss_pred             hHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 041858          323 TSVALTWFFWLLHKNLEVETKIRVEINEIL  352 (528)
Q Consensus       323 t~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  352 (528)
                      ...++.|.++-.-..||..+.+++||+++.
T Consensus        52 sl~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   52 SLFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            345566777777779999999999999874


No 54 
>PF07234 DUF1426:  Protein of unknown function (DUF1426);  InterPro: IPR009871 This family consists of several Banana bunchy top virus proteins of around 120 residues in length. Q9IGU4 from SWISSPROT is annotated a movement protein whereas most other family members are hypothetical. The function of this family is unknown.
Probab=27.40  E-value=1.5e+02  Score=21.49  Aligned_cols=25  Identities=24%  Similarity=0.389  Sum_probs=12.0

Q ss_pred             CccccchhhhhHHHHHHHHHHHHHH
Q 041858            1 MAMTRKLLFLVSDWFYAHICLWDIA   25 (528)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~   25 (528)
                      ||.|.----+..-||+-...+++.+
T Consensus         1 maLTtERVKlfFEwFLF~~AIFiAI   25 (117)
T PF07234_consen    1 MALTTERVKLFFEWFLFFGAIFIAI   25 (117)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHH
Confidence            4444433445566765444444333


No 55 
>PF15050 SCIMP:  SCIMP protein
Probab=25.61  E-value=1.4e+02  Score=22.84  Aligned_cols=24  Identities=21%  Similarity=0.285  Sum_probs=9.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhc
Q 041858           18 HICLWDIAAAASGLFILSCICQKL   41 (528)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~   41 (528)
                      ++.++++++.+.+-+++++.+++.
T Consensus        11 iLAVaII~vS~~lglIlyCvcR~~   34 (133)
T PF15050_consen   11 ILAVAIILVSVVLGLILYCVCRWQ   34 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444444444434444433333


No 56 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=25.07  E-value=2.4e+02  Score=20.20  Aligned_cols=50  Identities=16%  Similarity=0.024  Sum_probs=38.8

Q ss_pred             ChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 041858          304 PDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILS  353 (528)
Q Consensus       304 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  353 (528)
                      ..+.........++-=+..++....-.+.+-++||+..+++.+.+.+-+.
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            33444445566677778888888888999999999999999999887653


No 57 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=24.62  E-value=2.1e+02  Score=20.48  Aligned_cols=15  Identities=13%  Similarity=0.408  Sum_probs=5.8

Q ss_pred             HHHHHHHHHHHHHHH
Q 041858           14 WFYAHICLWDIAAAA   28 (528)
Q Consensus        14 ~~~~~~~~~~~~~~~   28 (528)
                      ||.+..++++++++.
T Consensus        36 ~~lvI~~iFil~Vil   50 (94)
T PF05393_consen   36 WFLVICGIFILLVIL   50 (94)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            343344343333333


No 58 
>PRK06789 flagellar motor switch protein; Validated
Probab=24.57  E-value=74  Score=22.11  Aligned_cols=40  Identities=5%  Similarity=0.123  Sum_probs=29.4

Q ss_pred             HHhhhccCCCCCcccccccccCc--ccCCCeeecCCCEEEEe
Q 041858          381 ALSESLRLYPSVPIEMKQVEEDD--AFPDGTMVKKGARVLYC  420 (528)
Q Consensus       381 ~i~E~lRl~p~~~~~~~~~~~~~--~~~~g~~ip~G~~v~~~  420 (528)
                      -++|-+.+.+-.-...-+...+.  ..++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            36788888876655555555543  45699999999999876


No 59 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=24.07  E-value=1.9e+02  Score=20.35  Aligned_cols=19  Identities=5%  Similarity=-0.006  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHhhhhc
Q 041858           23 DIAAAASGLFILSCICQKL   41 (528)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~   41 (528)
                      ++++.+.+++++..+++..
T Consensus        10 ~V~V~IVclliya~YRR~~   28 (92)
T PHA02681         10 VIVISIVCYIVIMMYRRSC   28 (92)
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            3333444444444333333


No 60 
>PF07204 Orthoreo_P10:  Orthoreovirus membrane fusion protein p10;  InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences. p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].
Probab=23.70  E-value=78  Score=22.90  Aligned_cols=16  Identities=19%  Similarity=0.252  Sum_probs=10.5

Q ss_pred             cchhhhhHHHHHHHHH
Q 041858            5 RKLLFLVSDWFYAHIC   20 (528)
Q Consensus         5 ~~~~~~~~~~~~~~~~   20 (528)
                      ++.+++.+-|..+...
T Consensus        33 ~atS~~~ayWpyLA~G   48 (98)
T PF07204_consen   33 QATSSFVAYWPYLAAG   48 (98)
T ss_pred             EEeehHHhhhHHhhcc
Confidence            4567788889655443


No 61 
>PF06667 PspB:  Phage shock protein B;  InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=22.51  E-value=2.1e+02  Score=20.04  Aligned_cols=14  Identities=21%  Similarity=0.095  Sum_probs=5.6

Q ss_pred             HHHHHHHHHHHhhh
Q 041858           26 AAASGLFILSCICQ   39 (528)
Q Consensus        26 ~~~~~~~~~~~~~~   39 (528)
                      +++.+.++++|..+
T Consensus        16 fVap~WL~lHY~sk   29 (75)
T PF06667_consen   16 FVAPIWLILHYRSK   29 (75)
T ss_pred             HHHHHHHHHHHHHh
Confidence            33333444444433


No 62 
>PF03554 Herpes_UL73:  UL73 viral envelope glycoprotein  ;  InterPro: IPR005211 This entry represents a conserved region found in a number of viral proteins: BLRF1, U46, 53, and UL73, collectively known as glycoprotein N. These UL73-like envelope glycoproteins, which associate in a high molecular mass complex with their counterpart protein gM, induce neutralizing antibody responses in the host. These glycoproteins are highly polymorphic, particularly in the N-terminal region [].; GO: 0019031 viral envelope
Probab=22.28  E-value=2e+02  Score=20.55  Aligned_cols=9  Identities=33%  Similarity=0.386  Sum_probs=6.2

Q ss_pred             hhhhhHHHH
Q 041858            7 LLFLVSDWF   15 (528)
Q Consensus         7 ~~~~~~~~~   15 (528)
                      ++++.+.|.
T Consensus        45 l~SFsSIW~   53 (82)
T PF03554_consen   45 LSSFSSIWA   53 (82)
T ss_pred             ehHHHHHHH
Confidence            456777786


No 63 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.18  E-value=1.8e+02  Score=22.79  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=30.4

Q ss_pred             hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhc
Q 041858           63 NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKT  107 (528)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~  107 (528)
                      .+....+++|.++||.+--.     .+...+...|++.++++...
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~-----~~~~~l~~~d~~~l~~l~~~  113 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY-----KGAYLLECDDPELLDELLAD  113 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe-----cCeEEEEECCHHHHHHHHhC
Confidence            34567899999999995322     24567788899999999865


No 64 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=21.88  E-value=3.6e+02  Score=20.38  Aligned_cols=77  Identities=13%  Similarity=0.126  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHhhhhcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechh--------chHHHHHHHHHHHhhC
Q 041858          266 ADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRD--------TTSVALTWFFWLLHKN  337 (528)
Q Consensus       266 ~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~--------tt~~~l~~~l~~L~~~  337 (528)
                      +...|.+|++.       ....++...|++.+...   =-+.+..++..++.|+.+        -++-.+.+++..|+.+
T Consensus         8 L~~~I~~Rk~~-------~~~~SYT~~L~~~G~~k---i~kKlgEEa~E~i~A~~~~d~~~~i~E~ADLlYHllVlL~~~   77 (105)
T PRK00400          8 LAATIEERKGA-------DPEGSYTAKLLDKGLDK---ILKKVGEEATEVVIAAKDGDREELVYEIADLLYHLLVLLAAR   77 (105)
T ss_pred             HHHHHHHHHhC-------CCCCcHHHHHHHCCHHH---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            34455555543       24466777777644211   012233333334433322        3455566777777776


Q ss_pred             hHHHHHHHHHHHHhh
Q 041858          338 LEVETKIRVEINEIL  352 (528)
Q Consensus       338 P~~~~~l~~Ei~~~~  352 (528)
                      -=-.+.+.+|+..-.
T Consensus        78 gv~~~dV~~eL~~R~   92 (105)
T PRK00400         78 GISLEDVLAELERRE   92 (105)
T ss_pred             CCCHHHHHHHHHHHc
Confidence            555566777776654


No 65 
>PF08780 NTase_sub_bind:  Nucleotidyltransferase substrate binding protein like;  InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=21.52  E-value=4e+02  Score=20.78  Aligned_cols=38  Identities=21%  Similarity=0.474  Sum_probs=23.5

Q ss_pred             HHHHHhhhcCceeecCChhHHHH---HHhhhhccchhhhhHh
Q 041858          119 RERFQDLLGDGIFNADSETWKEQ---RQMAKSHMHSSRFMEH  157 (528)
Q Consensus       119 ~~~~~~~~g~~~~~~~g~~~~~~---R~~~~~~~~~~~~~~~  157 (528)
                      ...++..+..|++ .+++.|..+   |...++.+........
T Consensus        63 r~~~r~A~~~glI-~d~e~Wl~m~~~RN~tsHtYde~~a~~i  103 (124)
T PF08780_consen   63 RDVFREAFKAGLI-DDGEIWLDMLEDRNLTSHTYDEETAEEI  103 (124)
T ss_dssp             HHHHHHHHHTTSS-SHHHHHHHHHHHHHHGGGTTSHHHHHHH
T ss_pred             HHHHHHHHHcCCC-CCHHHHHHHHHHhccccCCCCHHHHHHH
Confidence            4445455556777 677888664   6666666666554443


No 66 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=21.51  E-value=3e+02  Score=20.10  Aligned_cols=55  Identities=13%  Similarity=0.214  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhccccC--CCCChhhHHHHHHhhheechh
Q 041858          260 QIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKN--GHLPDKYYRDFSVSFILAGRD  321 (528)
Q Consensus       260 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~  321 (528)
                      ..+.+++...+......       ...++.++.+++.-+.+  +.++-+|-...+..+..|.++
T Consensus        27 ~Elk~Ll~~Elp~~l~~-------~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ac~~   83 (91)
T cd05024          27 DDLQKLMEKEFSEFLKN-------QNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLIACND   83 (91)
T ss_pred             HHHHHHHHHHhHHHHcC-------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence            44555555544433332       24567888888776543  668888887777777766654


No 67 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=21.44  E-value=69  Score=17.86  Aligned_cols=16  Identities=19%  Similarity=0.528  Sum_probs=12.8

Q ss_pred             CCccccccCCCCcccc
Q 041858          453 NQFKYAVFNAGPRLCL  468 (528)
Q Consensus       453 ~~~~~~~FG~G~r~C~  468 (528)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3457999998899995


No 68 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=21.32  E-value=1.5e+02  Score=17.42  Aligned_cols=12  Identities=25%  Similarity=0.537  Sum_probs=9.3

Q ss_pred             hhChHHHHHHHH
Q 041858          335 HKNLEVETKIRV  346 (528)
Q Consensus       335 ~~~P~~~~~l~~  346 (528)
                      .+|||+++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            479999888764


No 69 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=20.13  E-value=2.2e+02  Score=18.09  Aligned_cols=19  Identities=5%  Similarity=-0.073  Sum_probs=8.7

Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q 041858           21 LWDIAAAASGLFILSCICQ   39 (528)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~   39 (528)
                      +.+++.++.+..++|..++
T Consensus        10 iSl~l~~~~l~~f~Wavk~   28 (51)
T TIGR00847        10 ISLLLGGVGLVAFLWSLKS   28 (51)
T ss_pred             HHHHHHHHHHHHHHHHHcc
Confidence            3444444444455555443


Done!