Query         041858
Match_columns 528
No_of_seqs    205 out of 1935
Neff          11.2
Searched_HMMs 13730
Date          Mon Mar 25 19:41:38 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041858.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041858hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2ij2a1 a.104.1.1 (A:3-455) Cy 100.0 3.3E-74 2.4E-78  567.1  40.0  444   44-521     4-451 (453)
  2 d1tqna_ a.104.1.1 (A:) Mammali 100.0 2.3E-74 1.7E-78  572.2  28.9  452   37-521     6-471 (472)
  3 d2ciba1 a.104.1.1 (A:5-449) Cy 100.0 1.1E-73   8E-78  562.2  31.0  440   42-520     2-445 (445)
  4 d3czha1 a.104.1.1 (A:40-502) V 100.0   1E-72 7.5E-77  559.1  36.3  459   43-520     1-463 (463)
  5 d1r9oa_ a.104.1.1 (A:) Mammali 100.0 1.2E-72   9E-77  559.1  31.8  455   41-521     3-467 (467)
  6 d1po5a_ a.104.1.1 (A:) Mammali 100.0 3.2E-70 2.3E-74  541.3  32.4  454   41-520     2-465 (465)
  7 d1izoa_ a.104.1.1 (A:) Cytochr 100.0 8.6E-64 6.2E-68  485.5  36.1  404   48-520     2-411 (411)
  8 d1n97a_ a.104.1.1 (A:) Cyp175a 100.0 1.7E-59 1.2E-63  450.2  25.4  376   47-516     8-383 (385)
  9 d1gwia_ a.104.1.1 (A:) Cyp154c 100.0 7.4E-54 5.4E-58  413.8  23.4  379   63-519    10-402 (403)
 10 d1z8oa1 a.104.1.1 (A:3-404) Cy 100.0 2.9E-51 2.1E-55  396.2  28.7  371   64-516    13-400 (402)
 11 d1odoa_ a.104.1.1 (A:) Cyp154a 100.0 6.3E-51 4.6E-55  394.0  30.2  378   65-517    11-400 (401)
 12 d1jfba_ a.104.1.1 (A:) Cytochr 100.0 1.5E-50 1.1E-54  390.6  30.3  378   64-516    13-399 (399)
 13 d1ueda_ a.104.1.1 (A:) p450 mo 100.0 6.5E-50 4.7E-54  385.7  29.6  373   63-516    21-403 (403)
 14 d1q5da_ a.104.1.1 (A:) Cytochr 100.0 1.3E-49 9.2E-54  385.0  25.1  379   64-518    12-400 (401)
 15 d1cpta_ a.104.1.1 (A:) Cytochr 100.0 1.5E-47 1.1E-51  374.0  30.8  386   65-518    27-427 (428)
 16 d1n40a_ a.104.1.1 (A:) Cyp121  100.0 2.2E-48 1.6E-52  371.3  21.7  367   67-516    19-395 (395)
 17 d1re9a_ a.104.1.1 (A:) Cytochr 100.0 3.9E-47 2.8E-51  365.3  28.3  394   43-522     2-402 (404)
 18 d1s1fa_ a.104.1.1 (A:) Cyp158a 100.0   1E-45 7.3E-50  356.7  22.3  369   68-517    22-398 (399)
 19 d1lfka_ a.104.1.1 (A:) p450 mo 100.0 4.6E-44 3.4E-48  343.9  22.7  364   74-516    19-394 (394)
 20 d1ue8a_ a.104.1.1 (A:) Cyp119  100.0   3E-43 2.2E-47  334.2  22.9  354   66-518     2-366 (367)
 21 d1io7a_ a.104.1.1 (A:) Cyp119  100.0 8.5E-42 6.2E-46  324.6  29.1  352   66-517     2-365 (366)
 22 d1mo6a2 d.48.1.1 (A:270-329) R  46.9      10 0.00076   22.5   3.4   22  331-352    38-59  (60)
 23 d1weya_ d.58.7.1 (A:) Calcipre  30.0      34  0.0025   22.8   4.5   58   50-107     8-65  (104)
 24 d1xp8a2 d.48.1.1 (A:283-341) R  28.9      29  0.0021   20.4   3.3   22  331-352    37-58  (59)
 25 d1aisa2 d.129.1.1 (A:93-181) T  26.0      17  0.0012   23.7   2.1   39  436-474    35-74  (89)
 26 d1u94a2 d.48.1.1 (A:269-328) R  26.0      36  0.0026   20.0   3.4   22  330-351    37-58  (60)
 27 d1mp9a2 d.129.1.1 (A:97-197) T  25.9      19  0.0014   24.1   2.4   60  436-495    35-97  (101)
 28 d1nija2 d.237.1.1 (A:224-318)   25.2      64  0.0047   20.8   5.1   30   63-92     15-46  (95)
 29 d1nrja_ d.110.4.4 (A:) Srx dom  23.2       8 0.00058   27.3  -0.0   23  465-487    18-40  (155)
 30 d2vgna2 c.55.4.2 (A:136-277) D  22.3      77  0.0056   22.5   5.4   57  284-346    83-139 (142)

No 1  
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=100.00  E-value=3.3e-74  Score=567.09  Aligned_cols=444  Identities=22%  Similarity=0.324  Sum_probs=364.6

Q ss_pred             CCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHH
Q 041858           44 RGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQ  123 (528)
Q Consensus        44 PGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~  123 (528)
                      |||.+||++||++.+..  .+++.++.+++++||+||++   ++++.++|+++||+++++++.++...+.....+ ..+.
T Consensus         4 PGP~~~p~lG~l~~l~~--~~~~~~~~~~~~kyG~if~~---~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~-~~~~   77 (453)
T d2ij2a1           4 PQPKTFGELKNLPLLNT--DKPVQALMKIADELGEIFKF---EAPGRVTRYLSSQRLIKEACDESRFDKNLSQAL-KFVR   77 (453)
T ss_dssp             CCCCCCGGGTTGGGGCS--SCHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHTCTTTEEECCCHHH-HHHH
T ss_pred             ccCCCcchhhCHHHhCC--CCHHHHHHHHHHHhCCEEEE---EeCCceEEEECCHHHHHHHHhcCCcccccccHh-HHHH
Confidence            69999999999988743  45899999999999999999   899999999999999999998765555555443 4455


Q ss_pred             hhhcCceee--cCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHH
Q 041858          124 DLLGDGIFN--ADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTA  201 (528)
Q Consensus       124 ~~~g~~~~~--~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  201 (528)
                      .+.|.|++.  .+|+.|+++|+++.+.|+..+++.+ .+.+.++ .+.+.+.+++. .+++++|+.+++..+++++++++
T Consensus        78 ~~~g~~~~~~~~~g~~wk~~Rk~l~~~fs~~~l~~~-~~~i~~~-~~~li~~l~~~-~~~~~idl~~~~~~~~~~~i~~~  154 (453)
T d2ij2a1          78 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGY-HAMMVDI-AVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLC  154 (453)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHH-HHHHHHH-HHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHH
T ss_pred             HhcCCcEEecCCChHHHHHHHHHHHHHhhhhhhhhh-hhhHHHH-HHHHHHHhhhc-CCCCccchHHHHHHHhhhcchhc
Confidence            778888876  4799999999999999999999888 6778776 66666666553 45678999999999999999999


Q ss_pred             HhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 041858          202 ALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLG  281 (528)
Q Consensus       202 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  281 (528)
                      +||.+++....+.....+.+....+..........+.+.+     ......++..+..+.+.+++++.++++++..    
T Consensus       155 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----  225 (453)
T d2ij2a1         155 GFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDP-----AYDENKRQFQEDIKVMNDLVDKIIADRKASG----  225 (453)
T ss_dssp             HHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSG-----GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             ccccccchhhhccchHHHHhhhhccchhhhhhhhcccccc-----cchhhHHHHHHHHHHHHHHHHHHHhhhcccc----
Confidence            9999987665443333333333333333221111111111     1113345666777888888888888776652    


Q ss_pred             CCCChhhHHHHHHhccccC--CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccccccc
Q 041858          282 SLIDQSDLLSRLMDTEEKN--GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGII  359 (528)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  359 (528)
                        +...|+++.+++..+++  ..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++++.+.     
T Consensus       226 --~~~~d~l~~ll~~~~~~~~~~ls~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~~-----  298 (453)
T d2ij2a1         226 --EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-----  298 (453)
T ss_dssp             --CCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-----
T ss_pred             --ccccchhhhhhhhcccccCcchhhhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhhcc-----
Confidence              35678999999876543  569999999999999999999999999999999999999999999999998764     


Q ss_pred             ccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcC
Q 041858          360 QLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFK  439 (528)
Q Consensus       360 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~  439 (528)
                           ...+.+++.++|||+|||+||+|++|+++...|++..++++.+||.|||||.|+++.+++|+||++||+||++|+
T Consensus       299 -----~~~~~~~l~~~p~L~a~i~E~lR~~p~~~~~~r~~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~dp~~F~  373 (453)
T d2ij2a1         299 -----PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR  373 (453)
T ss_dssp             -----SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCC
T ss_pred             -----ccCChhhhhcCCcchhhhhhhhcccccccccccccccccccCCcceeecccccccchhhcccChhhcCCchhhcC
Confidence                 357899999999999999999999999999999999999988999999999999999999999999988999999


Q ss_pred             CCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEEc
Q 041858          440 PERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       440 P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  519 (528)
                      ||||+++.   ..+...|+|||+|+|+|+|+++|.+|+++++++||++||+++.++.+.+.....++.| ++++|++++|
T Consensus       374 PeRfl~~~---~~~~~~~~pFG~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R  449 (453)
T d2ij2a1         374 PERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKP-EGFVVKAKSK  449 (453)
T ss_dssp             GGGGSSGG---GSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEE-TTCEEEEEEC
T ss_pred             ccccCCCC---CCCCCcccCCCCCCccChhHHHHHHHHHHHHHHHHHhCEEEeCCCCccCceeeeEEcc-CCeEEEEEEC
Confidence            99999752   2345679999999999999999999999999999999999998877776666677776 5799999999


Q ss_pred             cc
Q 041858          520 LD  521 (528)
Q Consensus       520 ~~  521 (528)
                      +.
T Consensus       450 ~~  451 (453)
T d2ij2a1         450 KI  451 (453)
T ss_dssp             CC
T ss_pred             CC
Confidence            64


No 2  
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-74  Score=572.21  Aligned_cols=452  Identities=22%  Similarity=0.360  Sum_probs=348.9

Q ss_pred             hhhhcccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCC-CCC
Q 041858           37 ICQKLTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNF-PKG  115 (528)
Q Consensus        37 ~~~~~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f-~~~  115 (528)
                      +.+++.| ||+++|+|||++++.++   ++.++.+++++||+||++   ++++.++|||+||+++++|+.++...+ ...
T Consensus         6 ~~~~~iP-GP~~~P~iG~~~~~~~~---~~~~~~~~~~kyG~i~~~---~l~~~~~vvv~~p~~~~~il~~~~~~~~~~~   78 (472)
T d1tqna_           6 FKKLGIP-GPTPLPFLGNILSYHKG---FCMFDMECHKKYGKVWGF---YDGQQPVLAITDPDMIKTVLVKECYSVFTNR   78 (472)
T ss_dssp             HHHTTCC-CCCCBTTTBTGGGGGGC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTTTTTTTCCBC
T ss_pred             hhhcCCC-CCCCcCceeEHHHhhCC---HHHHHHHHHHHhCCEEEE---EECCeeEEEECCHHHHHHHHhcCCcccccCC
Confidence            3444554 99999999999998764   889999999999999999   899999999999999999998764333 222


Q ss_pred             hhhHHHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 041858          116 KNYRERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTL  195 (528)
Q Consensus       116 ~~~~~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  195 (528)
                      ..+.  ...+.+.++++++|+.|+++|+++++.|+...+..+ .+.+.+. .+.+.+.+.+....++.+|+.+.+.++++
T Consensus        79 ~~~~--~~~~~~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~l~~~~~~~~~~dl~~~~~~~~~  154 (472)
T d1tqna_          79 RPFG--PVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQY-GDVLVRNLRREAETGKPVTLKDVFGAYSM  154 (472)
T ss_dssp             CCCS--CCGGGGGSTTTCCHHHHHHHHHHTTGGGSHHHHHTT-HHHHHHH-HHHHHHHHHHHHHHSSCEEHHHHHHHHHH
T ss_pred             cccc--cccccCCceeccCcHHHHHhhhhcCccccchhhhcc-cchhhhh-hhcccccccccccccccchhhhhhhccch
Confidence            2221  124567889999999999999999999999999888 6778777 66666677766667788999999999999


Q ss_pred             HHHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHH------HHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHH
Q 041858          196 DSICTAALGVDPGCLAIDLPEVPFAKAFEEATEL------SLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKI  269 (528)
Q Consensus       196 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  269 (528)
                      ++++.++||.+++..+..  ...+.+........      ......++       .+++.....+.....+.+.+++...
T Consensus       155 ~v~~~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  225 (472)
T d1tqna_         155 DVITSTSFGVNIDSLNNP--QDPFVENTKKLLRFDFLDPFFLSITVFP-------FLIPILEVLNICVFPREVTNFLRKS  225 (472)
T ss_dssp             HHHHHTSSCCCCCGGGCT--TCHHHHHHTTCCCCCTTSHHHHHHHHCG-------GGHHHHHHTTCCSSCHHHHHHHHHH
T ss_pred             hhhhheeccccccccccc--chhhhHHHHHHhhhhhccchhccccccc-------ccccccccccccccchhhhHHHHHH
Confidence            999999999998866542  22333332211110      00001111       1111111122223344566666666


Q ss_pred             HHHHHHhhhhcCCCCChhhHHHHHHhcc-----ccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHH
Q 041858          270 VSDRRNKLTRLGSLIDQSDLLSRLMDTE-----EKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKI  344 (528)
Q Consensus       270 i~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  344 (528)
                      ++++++...... .....+..+.++...     .....+++++++++++.+++||++||+.+++|++++|++|||+|+++
T Consensus       226 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ei~~~~l~l~~Ag~~tta~~l~~~l~~L~~~Pe~~~kl  304 (472)
T d1tqna_         226 VKRMKESRLEDT-QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKL  304 (472)
T ss_dssp             HHHHHTTTTTTC-SCCCCCHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHhhhcccccc-cccccchhhhhhhcccccccccccchhhhHHHhhhhhhhhcccccccccceeeccccccCccccccc
Confidence            666666544321 122334444444332     12256999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEecccc
Q 041858          345 RVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSM  424 (528)
Q Consensus       345 ~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~  424 (528)
                      |+|++++++..         ...+.+++.++|||+|||+|++|++|+++...|++.+| +.++||.|||||.|+++.+++
T Consensus       305 r~Ei~~~~~~~---------~~~~~~~l~~~~~l~a~i~E~lRl~p~~~~~~r~~~~d-~~~~g~~ipkGt~v~~~~~~~  374 (472)
T d1tqna_         305 QEEIDAVLPNK---------APPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKD-VEINGMFIPKGVVVMIPSYAL  374 (472)
T ss_dssp             HHHHHHHSTTT---------CCCCHHHHHHCHHHHHHHHHHHHHCCTTCCEEEECCSC-EEETTEEECTTCEEEECHHHH
T ss_pred             cceeheecccc---------ccchHHHhhccccccceeeeccccCCcccccccccccC-ccccCceeCCCCEEEEechhh
Confidence            99999998754         46788999999999999999999999998766665554 566999999999999999999


Q ss_pred             ccCCCCCCCCCCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCc--cccc
Q 041858          425 ARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNV--VPKV  502 (528)
Q Consensus       425 ~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~  502 (528)
                      |+||++| +||++|+||||++.+. ...++..|+|||+|+|.|||+++|.+|+++++++||++|||+++++.+.  ....
T Consensus       375 ~~d~~~~-~dp~~F~PeRfl~~~~-~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~  452 (472)
T d1tqna_         375 HRDPKYW-TEPEKFLPERFSKKNK-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL  452 (472)
T ss_dssp             HTCTTTS-SSTTSCCGGGGSTTTG-GGCCTTTSCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCS
T ss_pred             hcCchhC-CCccccCccccCCCCc-ccCCCceecCCCCCCccChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCCceecc
Confidence            9999999 9999999999997632 2345678999999999999999999999999999999999998876543  3344


Q ss_pred             ceEEeecCcEEEEEEEccc
Q 041858          503 TTTLYVKNGLMVTLKPRLD  521 (528)
Q Consensus       503 ~~~~~~~~~~~v~~~~r~~  521 (528)
                      ..++.|++++.|+++||+-
T Consensus       453 ~~~~~p~~~~~~~~~~R~~  471 (472)
T d1tqna_         453 GGLLQPEKPVVLKVESRDG  471 (472)
T ss_dssp             SSSCCBSSCCEEEEEETTC
T ss_pred             ceEEeeCCCEEEEEEECCC
Confidence            5667899999999999973


No 3  
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=1.1e-73  Score=562.25  Aligned_cols=440  Identities=17%  Similarity=0.229  Sum_probs=339.8

Q ss_pred             ccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHH
Q 041858           42 TNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRER  121 (528)
Q Consensus        42 ~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~  121 (528)
                      .||||.+||+|||++.|.++   ++.++.+++++||+||++   +++++++++|+||+++++|+.++...+.+...+. .
T Consensus         2 lP~~p~~~P~iG~~~~f~~d---~~~f~~~~~~kyG~if~~---~~~~~~~v~v~~p~~v~~i~~~~~~~~~~~~~~~-~   74 (445)
T d2ciba1           2 LPRVSGGHDEHGHLEEFRTD---PIGLMQRVRDELGDVGTF---QLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYP-F   74 (445)
T ss_dssp             CCBCSCCCBTTBTHHHHTTC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEECTTSCG-G
T ss_pred             CCCCCCCcCcCcCHHHHhHC---HHHHHHHHHHHHCCEEEE---EECCceEEEEcCHHHHHHHHhCCcccccCCccch-h
Confidence            47899999999999999765   889999999999999999   8899999999999999999988756666654443 4


Q ss_pred             HHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHH
Q 041858          122 FQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTA  201 (528)
Q Consensus       122 ~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  201 (528)
                      +...+|.|+++ +++.|++.|+++++.|+...+..+ .+.+.+. .+.+.   +.+ .+++++|+.+.++.+++++++.+
T Consensus        75 ~~~~~g~g~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~~~i~~~-~~~~~---~~l-~~~~~vdl~~~~~~~~~~~~~~~  147 (445)
T d2ciba1          75 MTPIFGEGVVF-DASPERRKEMLHNAALRGEQMKGH-AATIEDQ-VRRMI---ADW-GEAGEIDLLDFFAELTIYTSSAC  147 (445)
T ss_dssp             GHHHHC---------------------CCHHHHHHH-HHHHHHH-HHHHH---TTC-CSEEEEEHHHHHHHHHHHHHHHH
T ss_pred             hHhhcCCceee-cCchHHHHHHHhccccCccccccc-hHHHHHH-HHHhh---hhc-ccCCCcchHHhhhhhcceeeeec
Confidence            55677888765 567788899999999999998887 6777665 33333   332 34567999999999999999999


Q ss_pred             HhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 041858          202 ALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLG  281 (528)
Q Consensus       202 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  281 (528)
                      +||.++...    ....+.+.+..+.......       .....+++....++..++++.+.+++.+.+++++++...  
T Consensus       148 ~fG~~~~~~----~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--  214 (445)
T d2ciba1         148 LIGKKFRDQ----LDGRFAKLYHELERGTDPL-------AYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPT--  214 (445)
T ss_dssp             HTCHHHHTT----CCHHHHHHHHHHHTTCCGG-------GGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             cccccccch----hhhHHHHHHHHhhhhhhhh-------ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhcccccc--
Confidence            999876532    1234555544444322211       122234555667778889999999999999888876654  


Q ss_pred             CCCChhhHHHHHHhccccC--CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhccccccc
Q 041858          282 SLIDQSDLLSRLMDTEEKN--GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGII  359 (528)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  359 (528)
                       +....|+++.|++..+++  ..+++++++++++.+++||++||+.+++|++++|++||++|+++|+|++++.+.+    
T Consensus       215 -~~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~ll~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~----  289 (445)
T d2ciba1         215 -DKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG----  289 (445)
T ss_dssp             ----CCCHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGC----
T ss_pred             -cccccchhhhhhccccccccccCCcchhhhhhhhhhhhccccchhhccccccccccccccccccccccccccccc----
Confidence             234568999999876544  3589999999999999999999999999999999999999999999999998653    


Q ss_pred             ccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcC
Q 041858          360 QLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFK  439 (528)
Q Consensus       360 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~  439 (528)
                           ..++.+++.+||||+|||+|++|++|+++...|++.++ +.++||.|||||.|+++.+.+|+||++| +||++|+
T Consensus       290 -----~~~~~~~l~~lp~L~a~i~E~lRl~p~~~~~~~~~~~~-~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~  362 (445)
T d2ciba1         290 -----RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGE-FEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFV  362 (445)
T ss_dssp             -----CCHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSC-EEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCC
T ss_pred             -----ccchhhhcccchhhccccccccccccccceeccccccc-cccceeeccccccccccccccccCcccC-CChhhCC
Confidence                 46789999999999999999999999998877766555 4459999999999999999999999999 9999999


Q ss_pred             CCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCc--ccccceEEeecCcEEEEEE
Q 041858          440 PERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNV--VPKVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       440 P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~  517 (528)
                      ||||++++.........|+|||+|+|.|||++||..|++++++.|+++|||+++++.+.  ......++.|++++.|+++
T Consensus       363 PeRf~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  442 (445)
T d2ciba1         363 PARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYR  442 (445)
T ss_dssp             GGGGSTTTCHHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEE
T ss_pred             cccccCccccccCCCCcccCCCCCCccChhHHHHHHHHHHHHHHHHHhCEEEECCCCCccccccceEEEccCCCEEEEEE
Confidence            99999764433446678999999999999999999999999999999999999765322  1123455678889999999


Q ss_pred             Ecc
Q 041858          518 PRL  520 (528)
Q Consensus       518 ~r~  520 (528)
                      +|+
T Consensus       443 ~Rs  445 (445)
T d2ciba1         443 RRT  445 (445)
T ss_dssp             EC-
T ss_pred             eCc
Confidence            995


No 4  
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-72  Score=559.10  Aligned_cols=459  Identities=18%  Similarity=0.227  Sum_probs=351.7

Q ss_pred             cCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH
Q 041858           43 NRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF  122 (528)
Q Consensus        43 pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~  122 (528)
                      ||||+++|+|||++++..+...++.++.+++++||+||++   ++|+.++++|+||+++++|+.+++..|.+++......
T Consensus         1 ~PGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~kyG~if~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~   77 (463)
T d3czha1           1 PPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSL---DLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFM   77 (463)
T ss_dssp             CCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHH
T ss_pred             CcCCCCcCccccHHHhhCCCCcHHHHHHHHHHHhCCEEEE---EECCceEEEECCHHHHHHHHHhCccccCCCCchhhhH
Confidence            6899999999999999776566889999999999999999   8999999999999999999987767777665554444


Q ss_pred             HhhhcCc-eeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHH
Q 041858          123 QDLLGDG-IFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTA  201 (528)
Q Consensus       123 ~~~~g~~-~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  201 (528)
                      ....+.+ ++..+|+.|+.+|+.+...+..................+.+.+..+.  ..++++|+...+..+++++++.+
T Consensus        78 ~~~~~~~~~~~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~i~~~~  155 (463)
T d3czha1          78 KMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIET--YKGRPFDFKQLITNAVSNITNLI  155 (463)
T ss_dssp             HHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHT--TTTCCBCCHHHHHHHHHHHHHHH
T ss_pred             hhcCCCCceeCCCChHHHHHHHHhhhhhhccchhHHHHHHHHHHHHHHHHHHhhh--cCCCceehHHHHHHHHHHHHhhh
Confidence            3333444 55667999999999998765544443321222222323444443332  45668999999999999999999


Q ss_pred             HhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 041858          202 ALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLG  281 (528)
Q Consensus       202 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  281 (528)
                      +||..++..+.+.  ........................++++........++..+..+.+.+++.+.++.+++..+...
T Consensus       156 ~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  233 (463)
T d3czha1         156 IFGERFTYEDTDF--QHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQL  233 (463)
T ss_dssp             HHSSCCCTTCHHH--HHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTC
T ss_pred             ccCcccCccchhh--hhHHHHhhhhhhhhcccchhccccccchhhccchHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence            9999887543210  01111111111111111100111222334444456667778888888888888887776654322


Q ss_pred             CCCChhhHHHHHHhccccC-CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccc
Q 041858          282 SLIDQSDLLSRLMDTEEKN-GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQ  360 (528)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  360 (528)
                      ......++.+.+.+..... ..++++++..++..+++||+|||+.+++|++++|++||++|+||++|++.+.+..     
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-----  308 (463)
T d3czha1         234 PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN-----  308 (463)
T ss_dssp             CSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS-----
T ss_pred             ccchhhhhhhhhhhhcccccchhHHHHHHHHHHHHHhhhhccchhhhhhHHHhhccCcHHHHHHHHHHHhhcCCC-----
Confidence            2233445666666654433 5689999999999999999999999999999999999999999999999998754     


Q ss_pred             cccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCC
Q 041858          361 LQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKP  440 (528)
Q Consensus       361 ~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P  440 (528)
                          +.++++++++||||+||++||+|++|+++...+|.+.+++.++||.|||||.|+++.+++|+||++| +||++|+|
T Consensus       309 ----~~~~~~~l~~lp~l~a~~~Et~Rl~~~~~~~~~r~~~~~~~~~g~~ipkG~~v~~~~~~~~~d~~~~-~dp~~F~P  383 (463)
T d3czha1         309 ----GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHP  383 (463)
T ss_dssp             ----SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC-SSTTSCCG
T ss_pred             ----CCCCHHHHHhhhhcccccceeeeeeccccccceecccCCcccCCcEECCCCcccCcHHHhhCCcccC-CChhhcCc
Confidence                4689999999999999999999999999998888888888889999999999999999999999999 99999999


Q ss_pred             CCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCc--ccccceEEeecCcEEEEEEE
Q 041858          441 ERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNV--VPKVTTTLYVKNGLMVTLKP  518 (528)
Q Consensus       441 ~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~  518 (528)
                      |||++.. ....+...|+|||+|+|.|||++||.+|+++++++||++|+++++++..+  +...++++.|+ ++.|++++
T Consensus       384 eRfl~~~-~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~v~~~~  461 (463)
T d3czha1         384 ERFLDSS-GYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-PYLICAER  461 (463)
T ss_dssp             GGGBCTT-SCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-CCCBEEEE
T ss_pred             cccCCCc-cccCCCCceeCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCceeccCeEEecc-CcEEEEEe
Confidence            9999763 22345578999999999999999999999999999999999999765533  44455666775 68999999


Q ss_pred             cc
Q 041858          519 RL  520 (528)
Q Consensus       519 r~  520 (528)
                      |+
T Consensus       462 R~  463 (463)
T d3czha1         462 RH  463 (463)
T ss_dssp             CC
T ss_pred             Cc
Confidence            95


No 5  
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-72  Score=559.11  Aligned_cols=455  Identities=17%  Similarity=0.196  Sum_probs=334.7

Q ss_pred             cccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHH
Q 041858           41 LTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRE  120 (528)
Q Consensus        41 ~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~  120 (528)
                      ++||||+++|++||++.+..  .+++.++.+++++||+||++   ++|+.++|+|+||+++++|+.+++..|.+++.+..
T Consensus         3 ~lPPGP~~~P~lG~~~~l~~--~~~~~~~~~~~~kyG~i~~~---~~g~~~~vvv~dpe~i~~il~~~~~~f~~r~~~~~   77 (467)
T d1r9oa_           3 KLPPGPTPLPVIGNILQIGI--KDISKSLTNLSKVYGPVFTL---YFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL   77 (467)
T ss_dssp             BCCCCSSSCC-----CCBCH--HHHHHHHHHHHHHHCSEEEE---ESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSC
T ss_pred             CCCcCCCCCCccccHHHhCC--cCHHHHHHHHHHHhCCEEEE---EECCeeEEEECCHHHHHHHHHhCCcccCCCCcchh
Confidence            56789999999999998854  45889999999999999999   89999999999999999999877667765444332


Q ss_pred             HHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHh-hHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHH
Q 041858          121 RFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEH-SLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSIC  199 (528)
Q Consensus       121 ~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~-~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  199 (528)
                      ......|.++++++|+.|+.+|+.+.+.|+....... ....+... .......+.  ...+.++|+...+..+++++++
T Consensus        78 ~~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~i~  154 (467)
T d1r9oa_          78 AERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEE-ARCLVEELR--KTKASPCDPTFILGCAPCNVIC  154 (467)
T ss_dssp             CCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHH-HHHHHHHHH--TTTTSCBCTHHHHHHHHHHHHH
T ss_pred             hhhcCCCCceeeCCChHHHHHHHHHHHHhhccccchhHHHHHHHHH-HHHHHHHHH--hhccccccHHHHHHHHHhhhhh
Confidence            2334457889999999999999999998876555432 12222222 233333222  2456789999999999999999


Q ss_pred             HHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhc----CCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041858          200 TAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFL----LPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRN  275 (528)
Q Consensus       200 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  275 (528)
                      .+++|.++...+.     ..................    ..........+++ .......+..+.+.+++.+.++++.+
T Consensus       155 ~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~  228 (467)
T d1r9oa_         155 SIIFHKRFDYKDQ-----QFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAFMKSYILEKVKEHQE  228 (467)
T ss_dssp             HHHHSCCCCTTCH-----HHHHHHHHHHHHHHHHTCCBC-------CCCSCCT-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcccccchhhhh-----hHHHHHHHHHHHHHHhhchhhhhhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998874332     111111111111111110    0011111222222 33455667777788888888877766


Q ss_pred             hhhhcCCCCChhhHHHHHHhc-cccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcc
Q 041858          276 KLTRLGSLIDQSDLLSRLMDT-EEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSH  354 (528)
Q Consensus       276 ~~~~~~~~~~~~d~l~~ll~~-~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  354 (528)
                      .....+..+....+...+... ...+..++++++.+++..+++||+|||+.+++|++++|++||++|+++|+|++++.+.
T Consensus       229 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~dTTa~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  308 (467)
T d1r9oa_         229 SMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR  308 (467)
T ss_dssp             TCCTTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred             hhccccchhhhhhhhhhhhhhhccCCcccchhHHHHHHHHHHHcccccchhHHHHHHHHhhcCchHHHHHHhhhhhhcCC
Confidence            544322111112222222222 2223558999999999999999999999999999999999999999999999999875


Q ss_pred             cccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCC
Q 041858          355 KKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKD  434 (528)
Q Consensus       355 ~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~  434 (528)
                      +         ..++.+++.+||||+|||+|+||++|+++...|++..+++..+||.|||||.|+++.+++||||++| +|
T Consensus       309 ~---------~~~~~~~~~~l~yL~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~-~d  378 (467)
T d1r9oa_         309 N---------RSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PN  378 (467)
T ss_dssp             S---------SCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SS
T ss_pred             C---------CCCcHHHhhhhhhhhhhccccccccccCCcccccccccccccceeEEecCCccccchhhhcCCcccC-cC
Confidence            4         4689999999999999999999999999999998888888889999999999999999999999999 99


Q ss_pred             CCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCC---ccccc-ceEEeecC
Q 041858          435 CLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHN---VVPKV-TTTLYVKN  510 (528)
Q Consensus       435 p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~-~~~~~~~~  510 (528)
                      |++|+||||++++. ...++..|+|||+|+|.|||++||.+|+++++++|+++|||+++.+..   ..+.. +++..| .
T Consensus       379 p~~F~PeRfl~~~~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~e~~~~~~~~~~~~~~~~~~~~p-~  456 (467)
T d1r9oa_         379 PEMFDPHHFLDEGG-NFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-P  456 (467)
T ss_dssp             TTSCCGGGGBCTTS-CBCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-C
T ss_pred             cceeCccccCCCCC-CcCCCCCcccCCCCCcCChHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCCccccCcccccC-C
Confidence            99999999997632 234556799999999999999999999999999999999999865322   22222 234445 4


Q ss_pred             cEEEEEEEccc
Q 041858          511 GLMVTLKPRLD  521 (528)
Q Consensus       511 ~~~v~~~~r~~  521 (528)
                      +++|+++||+.
T Consensus       457 ~~~~~~~Pr~~  467 (467)
T d1r9oa_         457 FYQLCFIPIHH  467 (467)
T ss_dssp             CCCEEEEECCC
T ss_pred             CceEEEEecCC
Confidence            69999999973


No 6  
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=3.2e-70  Score=541.30  Aligned_cols=454  Identities=18%  Similarity=0.225  Sum_probs=336.3

Q ss_pred             cccCCCCCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHH
Q 041858           41 LTNRGPMLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRE  120 (528)
Q Consensus        41 ~~pPGP~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~  120 (528)
                      +.||||+++|++||++++.+  .+++.++.+++++||+||++   ++++.++|+|+||+++++|+.++...|.+++.+..
T Consensus         2 ~~pPgP~~~P~lG~~~~~~~--~~~~~~~~~~~~kyG~vf~~---~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~   76 (465)
T d1po5a_           2 KLPPGPSPLPVLGNLLQMDR--KGLLRSFLRLREKYGDVFTV---YLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAV   76 (465)
T ss_dssp             CCCCCSCCBTTTBTGGGCCT--TCHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGG
T ss_pred             CCCCCCCCcCccccHHHhcC--cCHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCccccCCCccchh
Confidence            46889999999999998865  34788999999999999999   89999999999999999999887677776555443


Q ss_pred             HHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhh-HHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHH
Q 041858          121 RFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHS-LQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSIC  199 (528)
Q Consensus       121 ~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~-~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  199 (528)
                      ......|.++++.+|+.|+.+|+.+.+.+...+..... ...+... ...+.....  ...+..+|+.+.+..++.++++
T Consensus        77 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~i~  153 (465)
T d1po5a_          77 VDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEE-ARCLVEELR--KSKGALLDNTLLFHSITSNIIC  153 (465)
T ss_dssp             GCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH-HHHHHHHHH--HTTTCCBCCHHHHHHHHHHHHH
T ss_pred             hhhccCCCceeecCchHHHHHHHHHHHHhhhcccchHHHHHHHHHH-HHHHHHhhh--ccCCCcccHHHHHHHHHHHHHH
Confidence            32233467899999999999999998887554433221 2222222 222222222  2456679999999999999999


Q ss_pred             HHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCC----ccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041858          200 TAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLP----PFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRN  275 (528)
Q Consensus       200 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  275 (528)
                      .++||.+.....     .....................    ...+...+.++ ...++..+..+.+.++..+.++++.+
T Consensus       154 ~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~i~~~~~  227 (465)
T d1po5a_         154 SIVFGKRFDYKD-----PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP-GTHRQIYRNLQEINTFIGQSVEKHRA  227 (465)
T ss_dssp             HHHHSSCCCTTC-----HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS-CSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCcccccc-----cchhhhhhhhhhhhcccccccccccchhhhhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999998765332     122222222222111111000    11112223333 33455667788888888888888766


Q ss_pred             hhhhcCCCCChhhHHHHHHhc-cccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcc
Q 041858          276 KLTRLGSLIDQSDLLSRLMDT-EEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSH  354 (528)
Q Consensus       276 ~~~~~~~~~~~~d~l~~ll~~-~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  354 (528)
                      ..+..............+... .+....++++++..+++.+++||++||+.+++|++++|++||++|+|+++|++++.++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~l~~~p~~~~kl~~ei~~~~~~  307 (465)
T d1po5a_         228 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS  307 (465)
T ss_dssp             TCCTTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred             hhccccccchhhhHHHHhhhcccccccchhHHHHHHHHHHHHhhccccchhhhHHHHHHHhhhhhHHHHHHHHHHHHcCc
Confidence            544321111111111111111 1222347889999999999999999999999999999999999999999999999875


Q ss_pred             cccccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCC
Q 041858          355 KKGIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKD  434 (528)
Q Consensus       355 ~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~  434 (528)
                      .         ..++.+++++||||+|||+||||++|+++...|++..+++.++||.|||||.|+++.+++||||++| +|
T Consensus       308 ~---------~~~~~~~~~~lp~l~avi~EtlRl~~~~~~~~~~~~~~d~~~~~~~ipkGt~v~~~~~~~~~d~~~~-~d  377 (465)
T d1po5a_         308 H---------RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYF-ET  377 (465)
T ss_dssp             S---------SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SS
T ss_pred             c---------cCcchhhhhhceeeecccccccccccccccccceeeeccceeeEEEecCCCEEEEeeeccccccccC-CC
Confidence            4         4678999999999999999999999999999998887777779999999999999999999999999 99


Q ss_pred             CCCcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCC-Ccc--ccc-ceEEeecC
Q 041858          435 CLEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDH-NVV--PKV-TTTLYVKN  510 (528)
Q Consensus       435 p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~--~~~-~~~~~~~~  510 (528)
                      |++|+||||++++ ....+...|+|||+|+|.|||++||.+|++++++.|+++|||+++.+. +.+  +.. +.+..| .
T Consensus       378 p~~F~PeRfl~~~-~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~~a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~  455 (465)
T d1po5a_         378 PNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-P  455 (465)
T ss_dssp             TTSCCGGGGBCTT-SCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-C
T ss_pred             cCccCccccCCCC-cCcCCCCCcCCCCCCCcCCchHHHHHHHHHHHHHHHHHhCEEEeCCCCCCCCCccccccceecC-C
Confidence            9999999999753 223456789999999999999999999999999999999999985432 222  222 233333 5


Q ss_pred             cEEEEEEEcc
Q 041858          511 GLMVTLKPRL  520 (528)
Q Consensus       511 ~~~v~~~~r~  520 (528)
                      +++|+++||+
T Consensus       456 ~~~~~~~~R~  465 (465)
T d1po5a_         456 SYQIRFLARH  465 (465)
T ss_dssp             CCCBEEEECC
T ss_pred             ccEEEEEeCc
Confidence            7999999995


No 7  
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=8.6e-64  Score=485.50  Aligned_cols=404  Identities=16%  Similarity=0.119  Sum_probs=309.3

Q ss_pred             CCccccchhhhhhhhhhHHHHHHHHHHHcCC-eeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHHhhh
Q 041858           48 LWPVLGVLPSMFLHLNNMYDWATEALIKTGG-TFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQDLL  126 (528)
Q Consensus        48 ~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~~~~  126 (528)
                      ..|++||++.+.++   ++.++.++++|||+ ||++   +++++++|+|+||+++++++.++...+.. .........++
T Consensus         2 ~~~~~~~~l~~~~~---~~~f~~~~~~kyg~~if~~---~~~g~~~vvv~~pe~i~~v~~~~~~~~~~-~~~~~~~~~~~   74 (411)
T d1izoa_           2 HDKSLDNSLTLLKE---GYLFIKNRTERYNSDLFQA---RLLGKNFICMTGAEAAKVFYDTDRFQRQN-ALPKRVQKSLF   74 (411)
T ss_dssp             BCCCTTHHHHHHHH---GGGHHHHHHHHTTSSEEEE---EETTEEEEEECSHHHHHHHTCTTTEECTT-CSCHHHHTTTT
T ss_pred             CCCChhhHHHHHHH---HHHHHHHHHHHHCCCeEEE---EECCccEEEEECHHHHHHHHcCCCCeecC-CCcHHHHHhhc
Confidence            45889999999875   78899999999996 9999   78999999999999999999765333322 22233344566


Q ss_pred             cC-ceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCC
Q 041858          127 GD-GIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGV  205 (528)
Q Consensus       127 g~-~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~  205 (528)
                      |. +++..+|+.|+++|+++.+.|+...+..+ .+.+.+.    +.+.++++ ..+.++|+.+.++.+++++++..+++.
T Consensus        75 g~~~~~~~dg~~h~~~R~~~~~~l~~~~l~~~-~~~~~~~----~~~~~~~~-~~~~~v~l~~~~~~l~~~v~~~~~g~~  148 (411)
T d1izoa_          75 GVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRL-AELMTEE----WKAAVTRW-EKADEVVLFEEAKEILCRVACYWAGVP  148 (411)
T ss_dssp             CTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHH-HHHHHHH----HHHHHHHH-TTSSEEEHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCCcccCCCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHH----HHHHHHHh-hccCchhHHHHHHHHHHHHHHHHcCCC
Confidence            75 57888999999999999999999988877 5666554    33333443 345679999999999999998865443


Q ss_pred             CCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q 041858          206 DPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLID  285 (528)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  285 (528)
                       ..       ..++.+....+..........+            ....+..++++.+.+++.+.++++++....    ..
T Consensus       149 -~~-------~~~~~~~~~~~~~~~~~~~~~~------------~~~~k~~~a~~~~~~~~~~~i~~~r~~~~~----~~  204 (411)
T d1izoa_         149 -LK-------ETEVKERADDFIDMVDAFGAVG------------PRHWKGRRARPRAEEWIEVMIEDARAGLLK----TT  204 (411)
T ss_dssp             -CC-------TTTHHHHHHHHHHHHHHTTCCS------------HHHHHHHHHHHHHHHHHHHHHHHHHTTSSC----CC
T ss_pred             -cc-------HHHHHHHHHHHHHHHHHhhhcc------------cchHHHHHHHHHHHHHHHHHHHHhhccccc----Cc
Confidence             22       1123333333332222111111            111233456778888999999888766443    34


Q ss_pred             hhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCC
Q 041858          286 QSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNV  365 (528)
Q Consensus       286 ~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  365 (528)
                      ..+.++.++...++++...++++..+.+.+++||++||+.+++|++++|++|||+|+++++|                  
T Consensus       205 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ag~~tts~~l~~~l~~L~~~P~vq~kl~~e------------------  266 (411)
T d1izoa_         205 SGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG------------------  266 (411)
T ss_dssp             TTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC------------------
T ss_pred             cccHHHHHHHHhHhcCCccccchhhhhhhhhhcccccchHHHHHHHHHHHhccccccccccc------------------
Confidence            45777777776665555666777777777889999999999999999999999999999765                  


Q ss_pred             CCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCC
Q 041858          366 IFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIK  445 (528)
Q Consensus       366 ~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~  445 (528)
                              ++|||+|||+||+|++|++++..|++.+| +.++||.|||||.|+++.+++||||++| +||++|+||||++
T Consensus       267 --------~~~~l~a~i~E~lRl~p~~~~~~r~~~~d-~~i~g~~ipkgt~V~~~~~~~~~dp~~~-~~p~~F~PeR~~~  336 (411)
T d1izoa_         267 --------NSREREMFVQEVRRYYPFGPFLGALVKKD-FVWNNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAE  336 (411)
T ss_dssp             --------CHHHHHHHHHHHHHHSCCCCEEEEEECSC-EEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTT
T ss_pred             --------ccchHHHHHHHHHHhhhcccccccccccc-cccceeecccccchhhhhhhhhcccccC-CCccccCccccCC
Confidence                    46899999999999999999877766665 4559999999999999999999999999 9999999999997


Q ss_pred             CCCccccCCccccccCCC----CcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEEcc
Q 041858          446 DGQFVSENQFKYAVFNAG----PRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKPRL  520 (528)
Q Consensus       446 ~~~~~~~~~~~~~~FG~G----~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  520 (528)
                      ..    .+...|+|||+|    +|+|||++||.+|++++++.|+++|+++++++...-........|+.++.|++.+|.
T Consensus       337 ~~----~~~~~~~pFg~G~~~~~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Rr  411 (411)
T d1izoa_         337 RE----ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  411 (411)
T ss_dssp             CC----CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             CC----CCCCccCCCCCCCCCCCeEChhHHHHHHHHHHHHHHHHHhcEEEcCCCCcCCCccccCCccCCCcEEEEEeCc
Confidence            52    345679999999    799999999999999999999999999987644221222344578889999999884


No 8  
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=1.7e-59  Score=450.16  Aligned_cols=376  Identities=22%  Similarity=0.297  Sum_probs=282.9

Q ss_pred             CCCccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHHHhhh
Q 041858           47 MLWPVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERFQDLL  126 (528)
Q Consensus        47 ~~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~~~~~  126 (528)
                      ..||.++.+   .   ++++.++.+++++||++| +   ++++.++++|+||+++++|+.++...+  .......+..++
T Consensus         8 ~~~~~~~~~---~---~dp~~~~~~~~~kyg~v~-~---~~~~~p~v~v~dp~~v~~il~~~~~~~--~~~~~~~~~~~~   75 (385)
T d1n97a_           8 EAWPYLKDL---Q---QDPLAVLLAWGRAHPRLF-L---PLPRFPLALIFDPEGVEGALLAEGTTK--ATFQYRALSRLT   75 (385)
T ss_dssp             HHHHHHHHH---H---HCHHHHHHHHHHHCSEEE-E---CCTTCCEEEECSHHHHHHHHHCTTEEC--CSHHHHHHHHHH
T ss_pred             cccHHHHHH---H---HCHHHHHHHHHHHCCCEE-E---EeCCEEEEEECCHHHHHHHHcCCCCCc--CCccHHHHHHHh
Confidence            356665533   2   348999999999999987 7   889999999999999999998763333  334455677889


Q ss_pred             cCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCC
Q 041858          127 GDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVD  206 (528)
Q Consensus       127 g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~  206 (528)
                      |+|+++++|+.|+++|+++++.|+.+.++.+ .+.+++. .+.+.   +++  .++++|+.+.+..++++++++++||.+
T Consensus        76 G~gl~~~~g~~wk~~R~~l~~~f~~~~l~~~-~~~~~~~-~~~l~---~~l--~~~~vdl~~~l~~~~~~vi~~~~fg~~  148 (385)
T d1n97a_          76 GRGLLTDWGESWKEARKALKDPFLPKNVRGY-REAMEEE-ARAFF---GEW--RGEERDLDHEMLALSLRLLGRALFGKP  148 (385)
T ss_dssp             CSSTTTCCHHHHHHHHHHHCGGGSHHHHHTT-HHHHHHH-HHHHH---HTC--CSCCEEHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCceecCCHHHHHHHHHHHhhhhcccccccc-hhhHHHH-HHHHH---hhc--cccchhHHHHHHHHhhhhhhhhhhccc
Confidence            9999999999999999999999999999888 6777666 33333   332  356799999999999999999999987


Q ss_pred             CCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCh
Q 041858          207 PGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQ  286 (528)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  286 (528)
                      ++...    .....+.+....   ..... +      ...++.....+..+....+.                       
T Consensus       149 ~~~~~----~~~~~~~~~~~~---~~~~~-~------~~~~~~~~~~~~~~~~~~~~-----------------------  191 (385)
T d1n97a_         149 LSPSL----AEHALKALDRIM---AQTRS-P------LALLDLAAEARFRKDRGALY-----------------------  191 (385)
T ss_dssp             CCHHH----HHHHHHHHHHHH---HHHHC-G------GGGGCHHHHHHHHHHHHHHH-----------------------
T ss_pred             cccch----hhhhhhhhhHHH---HHHhh-h------hhhhhhHHHHHHHHhhhhhH-----------------------
Confidence            65211    011122222211   11110 0      01111111111111111110                       


Q ss_pred             hhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCC
Q 041858          287 SDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVI  366 (528)
Q Consensus       287 ~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~  366 (528)
                       +.++.++.... .+.++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++.+               
T Consensus       192 -~~~~~~~~~~~-~~~l~~~ei~~~~~~~l~ag~dTt~~~l~~~l~~L~~~P~v~~~l~~E~~~~---------------  254 (385)
T d1n97a_         192 -REAEALIVHPP-LSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA---------------  254 (385)
T ss_dssp             -HHHGGGTTSTT-GGGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH---------------
T ss_pred             -HHHHHHHhhcc-cccCCHHHHHHHHHHHHHhhhccchhhhhhhhhHhhhhcccccccccccccc---------------
Confidence             01111111111 1238999999999999999999999999999999999999999999999864               


Q ss_pred             CCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCC
Q 041858          367 FTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKD  446 (528)
Q Consensus       367 ~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~  446 (528)
                                  .+||+|++|++|+++...|++.+|.+ ++||.||||+.|+++.+++|+|  .| +||++|+||||++.
T Consensus       255 ------------~a~i~EtlRl~p~~~~~~r~~~~d~~-~~g~~i~~g~~v~~~~~~~~~~--~~-~dp~~F~PeRf~~~  318 (385)
T d1n97a_         255 ------------LAAFQEALRLYPPAWILTRRLERPLL-LGEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEE  318 (385)
T ss_dssp             ------------HHHHHHHHHHSCSSCCEEEEESSCEE-ETTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHS
T ss_pred             ------------cceeeccccccccccccccccccccc-cccccccccccccccccccccc--cC-CCCcccCccccCcc
Confidence                        57999999999999998888776655 5999999999999999999987  56 99999999999864


Q ss_pred             CCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEE
Q 041858          447 GQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTL  516 (528)
Q Consensus       447 ~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~  516 (528)
                      .   ..+...|+|||+|+|.|||+++|..|++++++.|+++|+|++.++.+.  ....++.|++|++||+
T Consensus       319 ~---~~~~~~~lpFG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~p~~~~~~r~  383 (385)
T d1n97a_         319 R---GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGGLPARP  383 (385)
T ss_dssp             C---CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTCCEECC
T ss_pred             c---CCCCCCccCCCCCcccCchHHHHHHHHHHHHHHHHHhCEEEeCCCCcc--ccceEEeecCCeEEEe
Confidence            2   234567999999999999999999999999999999999998876543  4445788999998864


No 9  
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=100.00  E-value=7.4e-54  Score=413.81  Aligned_cols=379  Identities=15%  Similarity=0.158  Sum_probs=288.1

Q ss_pred             hhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH------------HhhhcCce
Q 041858           63 NNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF------------QDLLGDGI  130 (528)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~------------~~~~g~~~  130 (528)
                      .+++.++.++ ++||||+++.  ..|+.++++|++++.+++|+++. ..|+....+....            ....|.++
T Consensus        10 ~~~~~~~~~l-R~~GPv~~~~--~~g~~~~~vvt~~~~v~~vl~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l   85 (403)
T d1gwia_          10 TDLDGESARL-RAAGPLAAVE--LPGGVPVWAVTHHAEAKALLTDP-RLVKDINVWGAWRRGEIPADWPLIGLANPGRSM   85 (403)
T ss_dssp             SCHHHHHHHH-HHTCSEEEEE--ETTTEEEEEECSHHHHHHHHTCT-TEECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred             cCchHHHHHH-HhcCCEEEEE--eCCCceEEEeCCHHHHHHHhcCC-ccccCcccccccccccCccccccccccccCCcc
Confidence            3478888888 5689999983  13788999999999999999764 3343332222111            12346788


Q ss_pred             eecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCC
Q 041858          131 FNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCL  210 (528)
Q Consensus       131 ~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~  210 (528)
                      ++++|+.|+++|+++++.|+.+.+..+ .+.+.+. .+   +.++++...++.+|+...+...+...+...++|.+... 
T Consensus        86 l~~dG~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~---~ll~~l~~~~~~~d~~~~~a~~~~~~~~~~~~g~~~~~-  159 (403)
T d1gwia_          86 LTVDGAEHRRLRTLVAQALTVRRVEHM-RGRITEL-TD---RLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEAR-  159 (403)
T ss_dssp             GGCCHHHHHHHHHHHTTTSCHHHHHTT-HHHHHHH-HH---HHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGG-
T ss_pred             ccCCcHHHHHHHHHHhhhccccchhhh-hhHHHHH-HH---HHhhhhcccCceeeeehhhhhhhhhhhhhhhcCccccc-
Confidence            999999999999999999999999888 6777655 33   33445445667799987765544444445567754220 


Q ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHH
Q 041858          211 AIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLL  290 (528)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l  290 (528)
                           ...+...+..+.       . .           ........++.+.+.++..+.++++.+.        ...+.+
T Consensus       160 -----~~~~~~~~~~~~-------~-~-----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~~  207 (403)
T d1gwia_         160 -----LPRLKVLFEKFF-------S-T-----------QTPPEEVVATLTELASIMTDTVAAKRAA--------PGDDLT  207 (403)
T ss_dssp             -----HHHHHHHHHHHH-------C-T-----------TSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHH
T ss_pred             -----hhhccccccccc-------c-c-----------chhHHHHHHHHHHHHHhHHHHHHHHhcC--------cccccc
Confidence                 111111111110       0 0           0122345567777888888888776654        334566


Q ss_pred             HHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHH
Q 041858          291 SRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAE  370 (528)
Q Consensus       291 ~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~  370 (528)
                      ..+.........++.+++..++..+++||++||+.+++|+++.|+.||++|+++++|                       
T Consensus       208 ~~l~~~~~~~~~~~~~~~~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~~-----------------------  264 (403)
T d1gwia_         208 SALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSG-----------------------  264 (403)
T ss_dssp             HHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTT-----------------------
T ss_pred             cccccccccccchhhhhHHHHHHHHHHccccchhhhhhhhhhhhhhhhHHHHHHHHh-----------------------
Confidence            666666555556899999999999999999999999999999999999999998654                       


Q ss_pred             HhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCcc
Q 041858          371 ELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFV  450 (528)
Q Consensus       371 ~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~  450 (528)
                          ++|+++||+|++|++||++...+|++.++..++||.||+|+.|+++.+++||||++|||||++|+||||..     
T Consensus       265 ----~~~l~~~i~E~lRl~pp~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rd~~~~~pdP~~F~PeR~~~-----  335 (403)
T d1gwia_         265 ----EAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG-----  335 (403)
T ss_dssp             ----SSCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS-----
T ss_pred             ----hhcchhhccchhhhcCcccccccccccCCeEecceeecccceeeeecccccCChhhcCCchhhcCCCCCCC-----
Confidence                34899999999999999999989887777777999999999999999999999999988999999999942     


Q ss_pred             ccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeC-CCCcccccceEEeecCcEEEEEEEc
Q 041858          451 SENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDE-DHNVVPKVTTTLYVKNGLMVTLKPR  519 (528)
Q Consensus       451 ~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~r  519 (528)
                          ..|+|||.|+|.|+|++||+.|++++|+.|+++| +++++. ..+..+..+.+++...+++|++++.
T Consensus       336 ----~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~p~~~~~~~~~~~~~~~~~lpv~~~~~  402 (403)
T d1gwia_         336 ----NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHH  402 (403)
T ss_dssp             ----SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC
T ss_pred             ----CCcCccCCCCccChhHHHHHHHHHHHHHHHHHhCCCCEECCCcccceeCCccccCCCCceEEEEecC
Confidence                2489999999999999999999999999999999 999964 3334555566677778899998763


No 10 
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=100.00  E-value=2.9e-51  Score=396.22  Aligned_cols=371  Identities=17%  Similarity=0.202  Sum_probs=290.5

Q ss_pred             hHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCC--------------ChhhHHHHHhhhcCc
Q 041858           64 NMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPK--------------GKNYRERFQDLLGDG  129 (528)
Q Consensus        64 ~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~--------------~~~~~~~~~~~~g~~  129 (528)
                      +++..++++++ ||||+++   ++++.+.++|+++++|++++++. ..|+.              ............+.+
T Consensus        13 dpy~~y~~lr~-~gPv~~~---~~~g~~~~vvt~~e~v~~vl~d~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (402)
T d1z8oa1          13 DWYRTYAELRE-TAPVTPV---RFLGQDAWLVTGYDEAKAALSDL-RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN   87 (402)
T ss_dssp             SHHHHHHHHHH-HCSEEEE---EETTEEEEEECSHHHHHHHHHCT-TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred             ChHHHHHHHHh-cCCEEEE---eeCCccEEEECCHHHHHHHhcCC-ccccCcccccccccccccccccchhhHHHHhccc
Confidence            38888888854 6999999   78999999999999999999754 11211              111222344566788


Q ss_pred             eeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCC
Q 041858          130 IFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGC  209 (528)
Q Consensus       130 ~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~  209 (528)
                      ++..||+.|+++|+++++.|+.+.+..+ .+.+.+.+ +.+   ++++ ..++.+|+...+...+.+.++..+||.+...
T Consensus        88 l~~~dg~~H~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~l---~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  161 (402)
T d1z8oa1          88 MGTSDPPTHTRLRKLVSQEFTVRRVEAM-RPRVEQIT-AEL---LDEV-GDSGVVDIVDRFAHPLPIKVICELLGVDEKY  161 (402)
T ss_dssp             GGGCCTTHHHHHHHHHHTTSCHHHHHHT-HHHHHHHH-HHH---HHTS-CSSSEEEHHHHTTTHHHHHHHHHHTTCCGGG
T ss_pred             cccccHHHHhhhccceeeecccchhhHH-HHHHHHHH-HHH---hhcc-ccccccccccccccchhhhhhhhhhhhhHHH
Confidence            9999999999999999999999999887 67776663 333   3333 3456789999999999999999999976442


Q ss_pred             CcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhH
Q 041858          210 LAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDL  289 (528)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~  289 (528)
                      .      ..+........      ...+            .......++.+.+..++.+.+..++++        ...|+
T Consensus       162 ~------~~~~~~~~~~~------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~rr~~--------~~~d~  209 (402)
T d1z8oa1         162 R------GEFGRWSSEIL------VMDP------------ERAEQRGQAAREVVNFILDLVERRRTE--------PGDDL  209 (402)
T ss_dssp             T------TTHHHHHHHHH------CCCG------------GGHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSH
T ss_pred             H------HHHHHHHHHHH------hccc------------chhhhhHHHHHHHHHHHHHHHHHHHhC--------CCCCH
Confidence            1      12222211110      0111            112233455666777777777777653        45688


Q ss_pred             HHHHHhccccC-CCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCC
Q 041858          290 LSRLMDTEEKN-GHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFT  368 (528)
Q Consensus       290 l~~ll~~~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~  368 (528)
                      ++.++...+.+ ...+++++..++..+++||+|||+.++.|++++|++||++++++++|++                   
T Consensus       210 ~~~ll~~~~~~~~~~~~~~~~~~~~~~i~aG~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~-------------------  270 (402)
T d1z8oa1         210 LSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS-------------------  270 (402)
T ss_dssp             HHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------
T ss_pred             HHHHHHhhhhcCCCCCHHHHHHHHHHHhcccccchhhHHHHHHHHHhhhhHHHHHHhcccc-------------------
Confidence            88888776443 4589999999999999999999999999999999999999999998864                   


Q ss_pred             HHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCC
Q 041858          369 AEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQ  448 (528)
Q Consensus       369 ~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~  448 (528)
                              ++.++++|++|+.|+++...|++..+.. ++||.||+|+.|+++.+++||||++| +||++|+||||..   
T Consensus       271 --------~~~~~~~~~~~~~~~~~~~~R~~~~d~~-~~g~~ip~Gt~v~~~~~~~~~dp~~f-~dP~~F~PeR~~~---  337 (402)
T d1z8oa1         271 --------ALPNAVEEILRYIAPPETTTRFAAEEVE-IGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDTR---  337 (402)
T ss_dssp             --------GHHHHHHHHHHHTCSSCCEEEEESSCEE-ETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCCT---
T ss_pred             --------ccccchhhhhhhhhcccccccccccCcc-cCCccccccchhhhhhhhhccChhhC-CCccccCCCCCCC---
Confidence                    4678999999999999877776766655 49999999999999999999999999 9999999999832   


Q ss_pred             ccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCC-CCcccccceEEeecCcEEEEE
Q 041858          449 FVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDED-HNVVPKVTTTLYVKNGLMVTL  516 (528)
Q Consensus       449 ~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  516 (528)
                             .++|||.|+|.|+|++||++|++++|+.|+++| ++++.++ .++.+..+..+++..+++|++
T Consensus       338 -------~~lpFG~G~r~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~  400 (402)
T d1z8oa1         338 -------GHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL  400 (402)
T ss_dssp             -------TCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             -------CCCCCCCCccCChhHHHHHHHHHHHHHHHHHhCCCCeECCCCCCceecCCCccCCCCceEEEe
Confidence                   389999999999999999999999999999999 9998754 345566666778888899886


No 11 
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=100.00  E-value=6.3e-51  Score=393.96  Aligned_cols=378  Identities=18%  Similarity=0.211  Sum_probs=279.3

Q ss_pred             HHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh---hHHHH------HhhhcCceeecCC
Q 041858           65 MYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN---YRERF------QDLLGDGIFNADS  135 (528)
Q Consensus        65 ~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~---~~~~~------~~~~g~~~~~~~g  135 (528)
                      ++.+++++ ++|||||++   ++++.+.|+++||+++++++.++...+.....   +....      ....+++++..+|
T Consensus        11 ~~~~~~~l-r~~Gpv~~~---~~~g~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   86 (401)
T d1odoa_          11 HHTEHRTL-REGGPATWV---DVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYG   86 (401)
T ss_dssp             HHHHHHHH-HTTCSEEEE---EETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCCH
T ss_pred             hHHHHHHH-HhhCCEEEE---ecCCceEEEECCHHHHHHHhcCCCcccccccccccccccccccchhhhccCCCcccCCh
Confidence            55555554 689999999   89999999999999999999875333322211   11111      1223468899999


Q ss_pred             hhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCC
Q 041858          136 ETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLP  215 (528)
Q Consensus       136 ~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~  215 (528)
                      +.|+++|+++++.|+.+++..+ .+.++++ .+.+.+.+... .+++++|+...+...+...+...++|....       
T Consensus        87 ~~h~~~R~~l~~~fs~~~v~~~-~~~i~~~-~~~~~~~l~~~-~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~-------  156 (401)
T d1odoa_          87 PNHRKLRRLVAPAFSARRVDAM-RPAVEAM-VTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGHLMGVPQD-------  156 (401)
T ss_dssp             HHHHHHHHTTGGGGSHHHHHHH-HHHHHHH-HHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHHHHTCCHH-------
T ss_pred             HHHHHHHHHHHhhhCchhHHHH-HHHHHHH-HHHHHhhhhhc-cccccccccchhhhcccccccccccccccc-------
Confidence            9999999999999999999998 7888777 55555555543 456789999988888888888889996532       


Q ss_pred             CchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHh
Q 041858          216 EVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMD  295 (528)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  295 (528)
                        . .+.........   . ..           ........+....+..++....+...+...     +...+.......
T Consensus       157 --~-~~~~~~~~~~~---~-~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~  213 (401)
T d1odoa_         157 --R-RDGFRALVDGV---F-DT-----------TLDQAEAQANTARLYEVLDQLIAAKRATPG-----DDMTSLLIAARD  213 (401)
T ss_dssp             --H-HHHHHHHHHHH---H-CT-----------TCCHHHHHHHHHHHHHHHHHHHHHHHHSCC-----SSHHHHHHHHHC
T ss_pred             --c-chhhhhhhhhh---h-hc-----------cchhHHHHHHHHHHHHHHHHHhhhhccCCc-----cccccccccccc
Confidence              1 11111111110   0 00           011223334455556666555444443211     233444444444


Q ss_pred             ccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcC
Q 041858          296 TEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKM  375 (528)
Q Consensus       296 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l  375 (528)
                      ...++..++++++.+++..++++|++|++.+++|.+++++.+|+.+++++.|                           .
T Consensus       214 ~~~~~~~l~~~ei~~~~~~l~~~g~~t~~~~~~~~~~~l~~~~~~~~~~~~~---------------------------~  266 (401)
T d1odoa_         214 DEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKG---------------------------E  266 (401)
T ss_dssp             C-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHT---------------------------S
T ss_pred             ccccCCCCCHHHHHHHHHHHHhccccchhhhhhhhhcccccchhhhhhcccc---------------------------c
Confidence            4434456899999999999999999999999999999999999998876644                           1


Q ss_pred             hhHHHHHhhhccCCCCCcccccc-cccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCC
Q 041858          376 VYLHAALSESLRLYPSVPIEMKQ-VEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQ  454 (528)
Q Consensus       376 ~~l~a~i~E~lRl~p~~~~~~~~-~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~  454 (528)
                      .+..+||+|++|++|+++...++ +.++.++.+||.||+||.|+++.+++||||++| |||++|+||||+.         
T Consensus       267 ~~~~~~i~e~~R~~p~~~~~~~~~~~~d~~~~~G~~ip~Gt~v~~~~~~~hrd~~~~-~dp~~F~PeR~~~---------  336 (401)
T d1odoa_         267 VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRTVK---------  336 (401)
T ss_dssp             SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSCC---------
T ss_pred             cccceeeccccccccccccccccccccceeecCCEEecCCccccccHHHHhCCcccC-CchhhcCCCCCCC---------
Confidence            24578999999999999887765 566666668999999999999999999999999 9999999999974         


Q ss_pred             ccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeC-CCCcccccceEEeecCcEEEEEE
Q 041858          455 FKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDE-DHNVVPKVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       455 ~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~  517 (528)
                       .|+|||+|+|+|||++||+.|+++++++|+++| ++++++ +.+..+..+...++...++|+++
T Consensus       337 -~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  400 (401)
T d1odoa_         337 -EHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLH  400 (401)
T ss_dssp             -CCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC
T ss_pred             -CCCCCCCCCcCChhHHHHHHHHHHHHHHHHHHCCCcEECCCCCCCcccCCCccCCCCceeEEEe
Confidence             278999999999999999999999999999999 999864 33455666677888888999875


No 12 
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]}
Probab=100.00  E-value=1.5e-50  Score=390.61  Aligned_cols=378  Identities=14%  Similarity=0.130  Sum_probs=290.2

Q ss_pred             hHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh------h-HHHHHhhhcCceeecCCh
Q 041858           64 NMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN------Y-RERFQDLLGDGIFNADSE  136 (528)
Q Consensus        64 ~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~------~-~~~~~~~~g~~~~~~~g~  136 (528)
                      +++..+.+++ ++|||+++.  ..++.+.++|++++.+++++.++ ..++....      . ........+.+++..+|+
T Consensus        13 dP~~~~~~Lr-~~gPv~~~~--~~~g~~~~vvt~~~dv~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~   88 (399)
T d1jfba_          13 EPPAEFAKLR-ATNPVSQVK--LFDGSLAWLVTKHKDVCFVATSE-KLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPP   88 (399)
T ss_dssp             SCCTHHHHHH-HHCSEEEEE--CTTSCEEEEECSHHHHHHHHHCT-TEECCTTSTTCCCCSHHHHHHTTSCCCGGGCCTT
T ss_pred             ChHHHHHHHH-hcCCeEEEe--cCCCceEEEEcCHHHHHHHHcCC-ccccCcccccCcccccccccccccCCchhhcCcH
Confidence            3777788885 569999874  33467788999999999999765 22222211      1 111223334678888999


Q ss_pred             hHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCC
Q 041858          137 TWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLPE  216 (528)
Q Consensus       137 ~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~  216 (528)
                      .|+++|+++++.|+.+.++.+ .+.+++. .+.+.+.+......+..+++...+...+.+.+....||.....       
T Consensus        89 ~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~-------  159 (399)
T d1jfba_          89 EHMHQRSMVEPTFTPEAVKNL-QPYIQRT-VDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFND-------  159 (399)
T ss_dssp             HHHHHHTTTGGGGSHHHHHHH-HHHHHHH-HHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGG-------
T ss_pred             HHHHHHhhcCccccccccccc-hhhHHHH-HHHHHhhhhhccccccchhhhhhhhhhhHHHHHHHhhhhcchh-------
Confidence            999999999999999999888 7888777 5566666665555566799999999999999999999976541       


Q ss_pred             chHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhc
Q 041858          217 VPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDT  296 (528)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  296 (528)
                        ... +   ...........            ........+...+.+++.++++++++.        ...|.+..++..
T Consensus       160 --~~~-~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~~~~~~~~  213 (399)
T d1jfba_         160 --LEY-L---TQQNAIRTNGS------------STAREASAANQELLDYLAILVEQRLVE--------PKDDIISKLCTE  213 (399)
T ss_dssp             --HHH-H---HHHHHHHHCTT------------SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHH
T ss_pred             --hHH-H---HHHhhhhhhcc------------hhHHHHHHHHHHHHHHHHHHHHHHhhc--------cccccccccccc
Confidence              111 1   11111111111            222344456677888888888887754        345666666666


Q ss_pred             cccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcCh
Q 041858          297 EEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMV  376 (528)
Q Consensus       297 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~  376 (528)
                      ...++.++++++..++..+++||+|||+.+++|++++|++|||+++++++|..                           
T Consensus       214 ~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~~~~L~~~pe~~~~L~~e~~---------------------------  266 (399)
T d1jfba_         214 QVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPS---------------------------  266 (399)
T ss_dssp             TTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------------
T ss_pred             ccccCCCccchhhhhhhhhhhhccchhhhHHHHHHHHHhhchHHHHHHhcccc---------------------------
Confidence            55555689999999999999999999999999999999999999999987632                           


Q ss_pred             hHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCcc
Q 041858          377 YLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFK  456 (528)
Q Consensus       377 ~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~  456 (528)
                      +..+++.|++|++|+++...+|.+.++++++|+.||+|+.|+++.+++||||++| +||++|+||||..+        ..
T Consensus       267 ~~~~~~~e~lr~~~~~~~~~~R~~~~~~~~~g~~ip~G~~V~~~~~~~~~dp~~~-~dP~~F~PeR~~~~--------~~  337 (399)
T d1jfba_         267 LAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP--------QD  337 (399)
T ss_dssp             GHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS--------SC
T ss_pred             cccceeeecccccccccccccccccccccccCCcCcccccchhhhhhhcCChhhC-CCccccCcCCCCCC--------CC
Confidence            5688999999999999988888888888889999999999999999999999999 99999999999743        35


Q ss_pred             ccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCC-CCcccccceEEeecCcEEEEE
Q 041858          457 YAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDED-HNVVPKVTTTLYVKNGLMVTL  516 (528)
Q Consensus       457 ~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  516 (528)
                      ++|||+|+|.|+|++||++|++++|+.|+++| +++++.+ .++.+..+..++....++|+|
T Consensus       338 ~lpFG~G~r~C~G~~lA~~el~~~l~~Ll~rfp~~~l~~~~~~~~~~~~~~~~g~~~lpv~~  399 (399)
T d1jfba_         338 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVIF  399 (399)
T ss_dssp             CCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEEC
T ss_pred             CcCCCCCCccChhHHHHHHHHHHHHHHHHHhCCcCEECCCCCCceeCCCCCCCCCccceeeC
Confidence            89999999999999999999999999999999 9998642 234444444444444566654


No 13 
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]}
Probab=100.00  E-value=6.5e-50  Score=385.65  Aligned_cols=373  Identities=14%  Similarity=0.149  Sum_probs=270.3

Q ss_pred             hhHHHHHHHHHHHcCCeeEEEee---ecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHH-----HHhhhcCceeecC
Q 041858           63 NNMYDWATEALIKTGGTFYYRGV---WMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRER-----FQDLLGDGIFNAD  134 (528)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~~~~~---~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~-----~~~~~g~~~~~~~  134 (528)
                      .++|..+.++ ++||||+++..+   .+|..+.++|+++++|++|+++. ..|++.+.+...     .....+.++++.|
T Consensus        21 ~dP~~~~~~l-R~~gPv~ri~~~~~~~~g~~~~w~vt~~~~vr~vl~d~-~~fss~~~~~~~~~~~~~~~~~~~~l~~~D   98 (403)
T d1ueda_          21 CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDH-EHFTTRPQFTQSKSGAHVEAQFVGQISTYD   98 (403)
T ss_dssp             TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCC-SSEECCCCC---------CGGGTTCGGGCC
T ss_pred             CCCcHHHHHH-HhcCCEEEeccCCccccCCCcEEEECCHHHHHHHHcCC-ccccCCcccccccccccchhhccCccccCC
Confidence            4588889988 469999988432   36777889999999999999765 666554333221     2233456788899


Q ss_pred             ChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCC
Q 041858          135 SETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDL  214 (528)
Q Consensus       135 g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~  214 (528)
                      |+.|+++|+++++.|+.+++..+ .+.+++. .+.+.+.+   ...|+++|+...+...+...+...+||...+      
T Consensus        99 g~~h~~~Rr~l~~~Fs~~~l~~~-~~~i~~~-~~~ll~~l---~~~g~~~Dl~~~~~~~~~~~~~~~~~g~~~~------  167 (403)
T d1ueda_          99 PPEHTRLRKMLTPEFTVRRIRRM-EPAIQSL-IDDRLDLL---EAEGPSADLQGLFADPVGAHALCELLGIPRD------  167 (403)
T ss_dssp             TTHHHHHHHHHGGGSSHHHHHHH-HHHHHHH-HHHHHHHH---HHHCTTEEHHHHTHHHHHHHHHHHHHTCCHH------
T ss_pred             hhHHHHHHHHHhHhhCHHHHHHh-hHHHHHH-HHHHHHHh---hccCCccchhhhhhhhhhhhhhHHHhccchh------
Confidence            99999999999999999999888 6777766 44443333   3456779988777666555555567885321      


Q ss_pred             CCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHH
Q 041858          215 PEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLM  294 (528)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  294 (528)
                         +...........    .  .     .     ....+........+.++++..+++++++        ...++...+.
T Consensus       168 ---~~~~~~~~~~~~----~--~-----~-----~~~~~~~~~~~~~~~~~~~~~i~~rr~~--------~~~~~~~~~~  220 (403)
T d1ueda_         168 ---DQREFVRRIRRN----A--D-----L-----SRGLKARAADSAAFNRYLDNLLARQRAD--------PDDGLLGMIV  220 (403)
T ss_dssp             ---HHHHHHHHHHHC----C---------------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHH
T ss_pred             ---hhhhhhhhhhhc----c--c-----c-----hhhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccchhhhhh
Confidence               111111111110    0  0     0     1223444566677888888888887754        3345555555


Q ss_pred             hccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhc
Q 041858          295 DTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKK  374 (528)
Q Consensus       295 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  374 (528)
                      +...  ..++++++.+++..+++||+|||+.+++|++++|++||++++++++|...                        
T Consensus       221 ~~~~--~~ls~~~l~~~~~~~l~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~~~------------------------  274 (403)
T d1ueda_         221 RDHG--DNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEK------------------------  274 (403)
T ss_dssp             HHHG--GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHH------------------------
T ss_pred             hccc--ccccHHHHHHHHHHHHhcchhhHHHHHHHHHHHHhhccchhhhhhhhccc------------------------
Confidence            4332  33999999999999999999999999999999999999999999887654                        


Q ss_pred             ChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCC
Q 041858          375 MVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQ  454 (528)
Q Consensus       375 l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~  454 (528)
                         ..+++.|.+|..++......|.+.+++.++|+.||||+.|+++.+++||||++| +||++|+||||..         
T Consensus       275 ---~~~~~~e~~~~~~~~~~~~~R~~~~d~~~~G~~ip~G~~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~---------  341 (403)
T d1ueda_         275 ---AERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRAAV---------  341 (403)
T ss_dssp             ---HHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCCC---------
T ss_pred             ---ccceeeeeccccccccccceeecccccccCCCccccccceecchhcccCCcccC-CCccccCCCCCCC---------
Confidence               345566666544444444444445556669999999999999999999999999 9999999999832         


Q ss_pred             ccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCC-CCcccccceEEeecCcEEEEE
Q 041858          455 FKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDED-HNVVPKVTTTLYVKNGLMVTL  516 (528)
Q Consensus       455 ~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  516 (528)
                       .++|||+|+|.|+|++||++|+++++++|+++| +++++.+ ++..++..+ +.....++|+|
T Consensus       342 -~~lpFG~G~r~CiG~~lA~~el~~~l~~Ll~~f~~~~l~~~~~~~~~~~~~-~~~~~~lpv~f  403 (403)
T d1ueda_         342 -SDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAF-VDCPDQVPVTW  403 (403)
T ss_dssp             -CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSS-SCCBSCCEEEC
T ss_pred             -CCCCCCCCCccChHHHHHHHHHHHHHHHHHHhCCCCEECCCCCcceecCCc-eeCceeeeeeC
Confidence             389999999999999999999999999999999 8998643 334444433 33444577764


No 14 
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]}
Probab=100.00  E-value=1.3e-49  Score=384.98  Aligned_cols=379  Identities=18%  Similarity=0.210  Sum_probs=279.5

Q ss_pred             hHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhh------HH---HHHhhhcCceeecC
Q 041858           64 NMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNY------RE---RFQDLLGDGIFNAD  134 (528)
Q Consensus        64 ~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~------~~---~~~~~~g~~~~~~~  134 (528)
                      +++.+++++++ |||||.+     ...+.++|++++.+++|+.++ ..+......      ..   .+..+.+.+++..+
T Consensus        12 dP~~~~~~lr~-~gPv~~~-----~~~~~~vvt~~~~v~~vl~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d   84 (401)
T d1q5da_          12 DPFPAIERLRE-ATPIFYW-----DEGRSWVLTRYHDVSAVFRDE-RFAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   84 (401)
T ss_dssp             CCHHHHHHHHH-HCSEEEE-----TTTTEEEECSHHHHHHHHTCT-TEECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             CcHHHHHHHHh-cCCEEEE-----CCCCEEEEcCHHHHHHHhcCC-CcccCccccccccccccccchhhhhcccccccCC
Confidence            47888887754 5999865     566789999999999999654 222222111      11   11223456789999


Q ss_pred             ChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCC
Q 041858          135 SETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDL  214 (528)
Q Consensus       135 g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~  214 (528)
                      |+.|+++|+++++.|+.+.+..+ .+.+.+. .+.+.+.+   . .++.+|+...+...+...++..++|.....     
T Consensus        85 g~~h~~~Rk~l~~~fs~~~l~~~-~~~i~~~-~~~l~~~~---~-~~~~~d~~~~~a~~~~~~~~~~~~~~~~~~-----  153 (401)
T d1q5da_          85 PEDHARVRKLVNPSFTSRAIDLL-RAEIQRT-VDQLLDAR---S-GQEEFDVVRDYAEGIPMRAISALLKVPAEC-----  153 (401)
T ss_dssp             HHHHHHHHHHHGGGGSHHHHGGG-HHHHHHH-HHHHHHHH---T-TSSCEETTTTTGGGSHHHHHHHHTTCCGGG-----
T ss_pred             HHHHHHhhheeecccccchhhhH-HHHHHHH-HHHHHHhh---h-hccccchhHHHHhhhhhcccccccccchhh-----
Confidence            99999999999999999999888 6777665 44444333   2 334466655555555555666677754331     


Q ss_pred             CCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHH
Q 041858          215 PEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLM  294 (528)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  294 (528)
                           .+.............. .     ......................++.+.+++.++.       ....|+++.|+
T Consensus       154 -----~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~d~l~~l~  215 (401)
T d1q5da_         154 -----DEKFRRFGSATARALG-V-----GLVPRVDEETKTLVASVTEGLALLHGVLDERRRN-------PLENDVLTMLL  215 (401)
T ss_dssp             -----HHHHHHHHHHHHHHTT-T-----TTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSCHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHhh-c-----cccccchhHHHHHHHHHHHHHHHHHHHHHhhhcc-------cccccHHHHHH
Confidence                 1111111111111110 0     0001111233444555566666677777666544       35578999999


Q ss_pred             hccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhc
Q 041858          295 DTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKK  374 (528)
Q Consensus       295 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  374 (528)
                      +...++..++++++..++..+++||+|||+++++|++++|+.||++|++|++|.+                         
T Consensus       216 ~~~~~~~~~~~~~i~~~~~~~l~ag~etta~~l~~~l~~L~~~p~~~e~l~~~~~-------------------------  270 (401)
T d1q5da_         216 QAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-------------------------  270 (401)
T ss_dssp             HHHHSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------------
T ss_pred             hhcccccchHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHhhHHHHHHhhcccc-------------------------
Confidence            8776666689999999999999999999999999999999999999999988754                         


Q ss_pred             ChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCC
Q 041858          375 MVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQ  454 (528)
Q Consensus       375 l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~  454 (528)
                        +...++.|.+|+.++.+...+++...++.++||.||||+.|+++.+++||||++| +||++|+||||..         
T Consensus       271 --~~~~~~~~~~r~~~~~~~~~~~~~~~d~~~~g~~ip~G~~v~~~~~~~~rdp~~f-~dP~~F~PeR~~~---------  338 (401)
T d1q5da_         271 --LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRDTS---------  338 (401)
T ss_dssp             --GHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCCT---------
T ss_pred             --cccccccchhhccccccccccccccccccccCcccCcceeEeeeccccCCCcccC-CCccccCCCCCCC---------
Confidence              3467889999999999988888888888889999999999999999999999999 9999999999842         


Q ss_pred             ccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCCCCcccccceEEeecCcEEEEEEE
Q 041858          455 FKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDEDHNVVPKVTTTLYVKNGLMVTLKP  518 (528)
Q Consensus       455 ~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  518 (528)
                       .|+|||.|+|+|+|++||++|++++|++|+++| ++++.++.  .+....++++..+++|+++|
T Consensus       339 -~~lpFg~G~r~C~G~~lA~~e~~~~la~ll~rf~~~~l~~~~--~~~~~~~~r~~~~l~v~~~p  400 (401)
T d1q5da_         339 -ASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VFGYHPAFRNIESLNVILKP  400 (401)
T ss_dssp             -TCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EECCCSSBCCEEECEEESSC
T ss_pred             -CCCCCCCCccCChhHHHHHHHHHHHHHHHHHhCCCCeECCCC--eecCCCcccCcccceEEEec
Confidence             489999999999999999999999999999999 99997643  33444456667788888876


No 15 
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]}
Probab=100.00  E-value=1.5e-47  Score=373.96  Aligned_cols=386  Identities=18%  Similarity=0.179  Sum_probs=269.6

Q ss_pred             HHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh--------hHHHHHh------hhcCce
Q 041858           65 MYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN--------YRERFQD------LLGDGI  130 (528)
Q Consensus        65 ~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~--------~~~~~~~------~~g~~~  130 (528)
                      .+..++.+ +++|||+.+.  ..++.+.++|++++.|++|+++. ..|+....        .......      ..+.++
T Consensus        27 ~y~~y~~l-r~~~Pv~~~~--~~g~~~~~vvt~~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  102 (428)
T d1cpta_          27 IYPAFKWL-RDEQPLAMAH--IEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSL  102 (428)
T ss_dssp             HHHHHHHH-HHHCSEEEEC--CTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCG
T ss_pred             cCHHHHHH-HhcCCeEEEe--eCCCceEEEeCCHHHHHHHHcCc-ccccCCccccccccccchhhhhhccccccccccch
Confidence            34444444 5679999884  23568899999999999999764 33432211        1111111      223567


Q ss_pred             eecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCC
Q 041858          131 FNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCL  210 (528)
Q Consensus       131 ~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~  210 (528)
                      +..||+.|+++|+++++.|+.+.+..+ .+.+.+. .+.+.+.+..  ..+...++......++.++++.+ +|....  
T Consensus       103 ~~~Dg~~H~~~Rr~l~~~Fs~~~i~~~-~~~i~~~-~~~ll~~l~~--~~~~~~~~~~~~~~l~~~v~~~~-~g~~~~--  175 (428)
T d1cpta_         103 TSMDPPTHTAYRGLTLNWFQPASIRKL-EENIRRI-AQASVQRLLD--FDGECDFMTDCALYYPLHVVMTA-LGVPED--  175 (428)
T ss_dssp             GGCCTTHHHHHHHHHHTTSSHHHHGGG-HHHHHHH-HHHHHHHHHT--SSSEEEHHHHTTTTHHHHHHHHH-HTCCGG--
T ss_pred             hhcCcHHHHHHHhhhccccCcchhhcc-hhhHHHH-HHHHHHHHHh--hcccchhhhHhhhhhhHHHHHhh-hccchh--
Confidence            888999999999999999999999888 6777666 4444333322  34555667777888888888875 443321  


Q ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHH
Q 041858          211 AIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLL  290 (528)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l  290 (528)
                              ..+.+.............................++..+..+.+.+++...++++.+.        ...++.
T Consensus       176 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--------~~~~~~  239 (428)
T d1cpta_         176 --------DEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC--------PKDDVM  239 (428)
T ss_dssp             --------GHHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHH
T ss_pred             --------HHHHHHHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--------cccccc
Confidence                    1111111111111000000000001111122444555666667777777666655432        233444


Q ss_pred             HHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHH
Q 041858          291 SRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAE  370 (528)
Q Consensus       291 ~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~  370 (528)
                      .............+++++..++..++++|++||+.+++|++++|+.||++++++++|                       
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~tt~~~l~~~~~~L~~~p~~~~~~~~~-----------------------  296 (428)
T d1cpta_         240 SLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD-----------------------  296 (428)
T ss_dssp             HHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC-----------------------
T ss_pred             cchhcccccccccchhHhHHHHHhhhhcccccccchhhhhhhhhhcChHhhhhhhhc-----------------------
Confidence            444444444455889999999999999999999999999999999999999987654                       


Q ss_pred             HhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCcc
Q 041858          371 ELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFV  450 (528)
Q Consensus       371 ~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~  450 (528)
                          ..|+.+|++|++|++|+++...|++.++ +.++||.||+|+.|.++.+++||||++| +||++|+||||.      
T Consensus       297 ----~~~~~~~~ee~lr~~pp~~~~~r~~~~d-~~i~G~~ip~Gt~V~~~~~~~~rDp~~~-~dP~~F~PeR~~------  364 (428)
T d1cpta_         297 ----PALIPRLVDEAVRWTAPVKSFMRTALAD-TEVRGQNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFP------  364 (428)
T ss_dssp             ----GGGHHHHHHHHHHHHCCBCCCEEEESSC-EEETTEEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCS------
T ss_pred             ----ccccccchhhcccccccccccceeeeee-eeeCCEEccCCCEEEecHHhhCCCchhC-CCccccCCCCCC------
Confidence                2388999999999999998888776665 5559999999999999999999999999 999999999993      


Q ss_pred             ccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCCCCcccccceEEeecCcEEEEEEE
Q 041858          451 SENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDEDHNVVPKVTTTLYVKNGLMVTLKP  518 (528)
Q Consensus       451 ~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  518 (528)
                          ..|+|||+|+|+|+|++||++|+++++++|+++| +++++++..  ......++....++|+++|
T Consensus       365 ----~~~~pFG~G~r~C~G~~lA~~el~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~l~v~~~~  427 (428)
T d1cpta_         365 ----NRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPR--LVATNFVGGPKNVPIRFTK  427 (428)
T ss_dssp             ----CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCCE--ECCCSSBCSEEECEEEEEE
T ss_pred             ----CCCCCcCCCcccChhHHHHHHHHHHHHHHHHHhCCCCeECCCCe--eccCCCcCCcccceEEEec
Confidence                2489999999999999999999999999999999 699986543  2333334455678899987


No 16 
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=2.2e-48  Score=371.30  Aligned_cols=367  Identities=16%  Similarity=0.147  Sum_probs=261.5

Q ss_pred             HHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHHH---Hh-hh-cCceeecCChhHHHH
Q 041858           67 DWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRERF---QD-LL-GDGIFNADSETWKEQ  141 (528)
Q Consensus        67 ~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~~---~~-~~-g~~~~~~~g~~~~~~  141 (528)
                      ..+.++ +++|||+++.  ..++.+..+|++++.+++|++++  .|.+........   .. .. +..+...+++.|+++
T Consensus        19 ~~~~~L-R~~~Pv~~~~--~~~g~~~wvvt~~~dv~~vl~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~H~~~   93 (395)
T d1n40a_          19 DAVAEL-RTREPIRKVR--TITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGL   93 (395)
T ss_dssp             HHHHHH-HHHCSEEEEE--CTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHHHHTTC
T ss_pred             HHHHHH-HhcCCEEEEE--cCCCCeEEEECCHHHHHHHHcCC--CcCcCCCccCCccccccccCChHHhhcCCChhHHHH
Confidence            345555 4579999885  33667788999999999999764  232222111100   00 01 123556689999999


Q ss_pred             HHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccH-HHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHH
Q 041858          142 RQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDL-QEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFA  220 (528)
Q Consensus       142 R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl-~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~  220 (528)
                      |+++++.|+.+ ...+ .+.+++.+ +.+   ++++...|+++|+ .++...++.++++. +||.+.+         +..
T Consensus        94 R~~~~~~Fsp~-~~~~-~~~i~~~~-~~l---l~~l~~~g~~~Dlv~~~a~~l~~~vi~~-llG~p~~---------d~~  157 (395)
T d1n40a_          94 RKAVMKAITPK-APGL-EQFLRDTA-NSL---LDNLITEGAPADLRNDFADPLATALHCK-VLGIPQE---------DGP  157 (395)
T ss_dssp             HHHHHHHTSSC-STTH-HHHHHHHH-HHH---HHHHHHHCSCEETTTTTHHHHHHHHHHH-HHTCCGG---------GHH
T ss_pred             HHHHHHHhhHH-HHHH-HHHHHHHH-HHH---hhcccccccccccHHHHHHHhhhhhHHH-Hhhhhhh---------hHH
Confidence            99999999864 4555 67776653 333   3333345677896 45667788999987 4786422         111


Q ss_pred             HHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhcccc-
Q 041858          221 KAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEK-  299 (528)
Q Consensus       221 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-  299 (528)
                      ..++.+...    ....  .         ............+.+++...++.+          ....++++.+++...+ 
T Consensus       158 ~~~~~~~~~----~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~l~~~~~~~  212 (395)
T d1n40a_         158 KLFRSLSIA----FMSS--A---------DPIPAAKINWDRDIEYMAGILENP----------NITTGLMGELSRLRKDP  212 (395)
T ss_dssp             HHHHTHHHH----TBCC--S---------SCCHHHHHHHHHHHHHHHHHHHCT----------TCCSHHHHHHHHHHTSG
T ss_pred             HHHhhhhhh----hhhc--c---------hhhHHHHHHHHHHHHHHHHHHHHh----------hhhhHHHHHhhhhhccc
Confidence            221111111    1000  0         001112223334444444433221          2346788877765432 


Q ss_pred             -CCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhH
Q 041858          300 -NGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYL  378 (528)
Q Consensus       300 -~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l  378 (528)
                       +..++++++..+++.+++||+|||+.+++|++++|++||++++++++|.+                           ++
T Consensus       213 ~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~~  265 (395)
T d1n40a_         213 AYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE---------------------------LI  265 (395)
T ss_dssp             GGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GH
T ss_pred             cccccccchhhHHHHHHHhhhcchhhhhhHHHHHHHhhCccccccccchhh---------------------------hh
Confidence             25589999999999999999999999999999999999999999988753                           56


Q ss_pred             HHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCcccc
Q 041858          379 HAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYA  458 (528)
Q Consensus       379 ~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~  458 (528)
                      .++|+|++|++||++...+|.+.+++.++|+.||+|+.|+++.+++||||++| +||++|+|+||.         ...|+
T Consensus       266 ~~~i~E~lRl~~p~~~~~~R~a~~d~~i~G~~ip~G~~V~~~~~~a~rDp~~f-~dP~~F~p~R~~---------~~~~l  335 (395)
T d1n40a_         266 PAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPN---------PTSHL  335 (395)
T ss_dssp             HHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSS---------TTCSS
T ss_pred             hhhhhhhcccccccccceeeecccccccccccccccceeeeeccccccccccC-CCccccCCCCCC---------CCCCC
Confidence            89999999999888766666666777779999999999999999999999999 999999999963         23589


Q ss_pred             ccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeC-CCCcccccceEEeecCcEEEEE
Q 041858          459 VFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDE-DHNVVPKVTTTLYVKNGLMVTL  516 (528)
Q Consensus       459 ~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~-~~~~~~~~~~~~~~~~~~~v~~  516 (528)
                      |||.|+|.|+|+++|++|++++++.|+++| ++++.. ++++.+..+...+....++|+|
T Consensus       336 ~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~~r~~~~LpV~~  395 (395)
T d1n40a_         336 AFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  395 (395)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             CCCCCCccChhHHHHHHHHHHHHHHHHHhCCCCEECCCcccCeeccCccccCCeeeeeeC
Confidence            999999999999999999999999999999 999864 3445666677777777788864


No 17 
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]}
Probab=100.00  E-value=3.9e-47  Score=365.29  Aligned_cols=394  Identities=15%  Similarity=0.103  Sum_probs=286.5

Q ss_pred             cCCCCCCcc--ccchhhhhh-h-hhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhh
Q 041858           43 NRGPMLWPV--LGVLPSMFL-H-LNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNY  118 (528)
Q Consensus        43 pPGP~~~P~--iG~~~~~~~-~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~  118 (528)
                      +|.|+.+|-  +..+-.+.. . ..+++..+..+++++++++..   .-.+.+..+|++++.+++++++. ..|+.....
T Consensus         2 ~p~p~~~p~~~~~d~d~~~p~~~~~dp~~~~~~lr~~~~~~~~~---~~~~~g~w~vtr~~dv~~vl~d~-~~Fss~~~~   77 (404)
T d1re9a_           2 APLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVW---TRCNGGHWIATRGQLIREAYEDY-RHFSSECPF   77 (404)
T ss_dssp             CCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHGGGGSTTSCSEEE---ECGGGCEEEECSHHHHHHHHHCT-TTEETTSCS
T ss_pred             CCCCCCCChhhccCCCCCChHHhhcCcHHHHHHHHhhCCCCEEE---ecCCCCEEEEcCHHHHHHHHcCC-CcCcCCCCC
Confidence            467877773  332221110 1 135788888888777764322   12345688999999999999764 666544322


Q ss_pred             -HHHHHhhhcCceeecCChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHH-HHHHHHH
Q 041858          119 -RERFQDLLGDGIFNADSETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEV-LLRFTLD  196 (528)
Q Consensus       119 -~~~~~~~~g~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~  196 (528)
                       ...........+...|++.|+++|+++++.|+.+.+..+ .+.+++. .+.+   ++++... +++|+... ...+..+
T Consensus        78 ~~~~~~~~~~~~~~~~D~p~H~~~R~~l~~~Fs~~~l~~~-~~~i~~~-~~~l---l~~~~~~-g~~D~v~~~a~~l~~~  151 (404)
T d1re9a_          78 IPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKL-ENRIQEL-ACSL---IESLRPQ-GQCNFTEDYAEPFPIR  151 (404)
T ss_dssp             SSHHHHHHCCCTTTTCCTTHHHHHHHHHHHHHSHHHHHHH-HHHHHHH-HHHH---HHHHGGG-SEEEHHHHTTTHHHHH
T ss_pred             CccccccccccccccCCCHHHHHHHHhccCcCCcchHHHH-HHHHHHH-HHHH---Hhhhhcc-CceeeeehhhhHHHHH
Confidence             222222333445667999999999999999999999888 6777665 3444   3333333 45887655 4778888


Q ss_pred             HHHHHHhCCCCCCCcCCCCCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041858          197 SICTAALGVDPGCLAIDLPEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNK  276 (528)
Q Consensus       197 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  276 (528)
                      +++.+ ||.+..         + .+.+..+.....   . +            ........+.+.+.+++..++++++++
T Consensus       152 vi~~l-lG~p~~---------~-~~~~~~~~~~~~---~-~------------~~~~~~~~a~~~l~~~~~~li~~~r~~  204 (404)
T d1re9a_         152 IFMLL-AGLPEE---------D-IPHLKYLTDQMT---R-P------------DGSMTFAEAKEALYDYLIPIIEQRRQK  204 (404)
T ss_dssp             HHHHH-TTCCGG---------G-HHHHHHHHHHHH---S-C------------CSSSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHH-Hhhccc---------c-hhhhhhhhhhhh---h-h------------hhhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            88874 786532         1 111111111111   0 0            001122345667788888888887764


Q ss_pred             hhhcCCCCChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccc
Q 041858          277 LTRLGSLIDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKK  356 (528)
Q Consensus       277 ~~~~~~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  356 (528)
                              ...|+++.++........++++++..++..+++||+|||+.+++|+++.|+.||+++++++++         
T Consensus       205 --------~~~d~~~~~~~~~~~~~~~~~~e~~~~~~~l~~ag~eTt~~~l~~~~~~L~~~p~~~~~l~~~---------  267 (404)
T d1re9a_         205 --------PGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER---------  267 (404)
T ss_dssp             --------CCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHCHHHHHHHHHC---------
T ss_pred             --------ccccchhhhhhcccccccCcHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhHHHHHHHhh---------
Confidence                    446788888877665556899999999999999999999999999999999999999887654         


Q ss_pred             cccccccCCCCCHHHhhcChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCC
Q 041858          357 GIIQLQDNVIFTAEELKKMVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCL  436 (528)
Q Consensus       357 ~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~  436 (528)
                                        ..++.++|+|++|++|++..  +|.+.++++++|+.||||+.|+++.+++||||++| +||+
T Consensus       268 ------------------~~~~~~~v~E~lR~~~p~~~--~r~~~~~~~~~G~~ip~G~~V~~~~~aanrDp~~f-~dPd  326 (404)
T d1re9a_         268 ------------------PERIPAACEELLRRFSLVAD--GRILTSDYEFHGVQLKKGDQILLPQMLSGLDEREN-ACPM  326 (404)
T ss_dssp             ------------------GGGHHHHHHHHHHHTCCBCC--EEEESSCEEETTEEECTTCEEECCHHHHTTCTTTS-SSTT
T ss_pred             ------------------hhcccccccccccccccccc--ccccccceecCCccCccchhhhhhhHhhcCCcccC-CCcc
Confidence                              24789999999999998753  45555666679999999999999999999999999 9999


Q ss_pred             CcCCCCcCCCCCccccCCccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCCCCcccccceEEeecCcEEEE
Q 041858          437 EFKPERWIKDGQFVSENQFKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDEDHNVVPKVTTTLYVKNGLMVT  515 (528)
Q Consensus       437 ~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~  515 (528)
                      +|+|+|.-          ..++|||+|+|.|+|+++|++|+++++..|+++| ++++.++.+.... +..++....++|+
T Consensus       327 ~F~p~R~~----------~~hl~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~-~~~~~g~~~lpv~  395 (404)
T d1re9a_         327 HVDFSRQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHK-SGIVSGVQALPLV  395 (404)
T ss_dssp             SCCTTCSS----------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCCEE-CSSBCEESCCEEE
T ss_pred             ccCCCCCC----------CCCCCCCCCcccCchHHHHHHHHHHHHHHHHHHCCCcEECCCCceecc-CCCccCceeeeEE
Confidence            99999941          2479999999999999999999999999999999 9999876544333 3445666789999


Q ss_pred             EEEcccc
Q 041858          516 LKPRLDL  522 (528)
Q Consensus       516 ~~~r~~~  522 (528)
                      ++|+...
T Consensus       396 ~~P~~~~  402 (404)
T d1re9a_         396 WDPATTK  402 (404)
T ss_dssp             CCGGGCC
T ss_pred             EeecCcC
Confidence            9987643


No 18 
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]}
Probab=100.00  E-value=1e-45  Score=356.67  Aligned_cols=369  Identities=15%  Similarity=0.117  Sum_probs=254.5

Q ss_pred             HHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChhhHHH--HH---hhhcCceeecCChhHHHHH
Q 041858           68 WATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYRER--FQ---DLLGDGIFNADSETWKEQR  142 (528)
Q Consensus        68 ~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~~~--~~---~~~g~~~~~~~g~~~~~~R  142 (528)
                      .+.+++ +||||+++.. +-|..+.++|++++.|++++++. ..+.........  ..   ...+.++...||+.|+++|
T Consensus        22 ~~~~lr-~~gPv~~~~~-~~g~~~~wvvt~~e~v~~vl~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~~~R   98 (399)
T d1s1fa_          22 VLTELM-REGPVTRISL-PNGEGWAWLVTRHDDVRLVTNDP-RFGREAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLR   98 (399)
T ss_dssp             HHHHHH-HHCSEEEEEC-SBSBSCEEEECSHHHHHHHHTCT-TEESTTTTTTTBCBSSSSCSSCTTSGGGCCTTHHHHHH
T ss_pred             HHHHHH-HcCCeEEEec-cCCccCEEEecCHHHHHHHHcCC-ccccccccccccccccccccccccchhccCcHHHHHHH
Confidence            455554 5699998832 12456788999999999999763 212111111000  00   0112456778999999999


Q ss_pred             HhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHHHH
Q 041858          143 QMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFAKA  222 (528)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  222 (528)
                      +++++.|+.+.+..+ .+.+.+. .+   +.+++..+.++++|+...+...+...++..+||.+...      ...+.+.
T Consensus        99 r~l~~~Fs~~~l~~~-~~~i~~~-~~---~l~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~  167 (399)
T d1s1fa_          99 RSVAAAFTARGVERV-RERSRGM-LD---ELVDAMLRAGPPADLTEAVLSPFPIAVICELMGVPATD------RHSMHTW  167 (399)
T ss_dssp             HHHHHHHSHHHHHHH-HHHHHHH-HH---HHHHHHHHHCSSEEHHHHTTTHHHHHHHHHHHTCCGGG------HHHHHHH
T ss_pred             HHhCcccCcchhHHH-HHHHHHH-HH---HHhhhcccccceeeehhhhhhhhhhheehhccCCchhh------hhhhhhH
Confidence            999999999998887 6666655 33   33333344567899988888778888888899965321      1122222


Q ss_pred             HHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhccccCCC
Q 041858          223 FEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKNGH  302 (528)
Q Consensus       223 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  302 (528)
                      ........   ....            .    ...+.....+++...+...+.        ....++........+. . 
T Consensus       168 ~~~~~~~~---~~~~------------~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~-  218 (399)
T d1s1fa_         168 TQLILSSS---HGAE------------V----SERAKNEMNAYFSDLIGLRSD--------SAGEDVTSLLGAAVGR-D-  218 (399)
T ss_dssp             HHHHHHHH---TTCC------------C----CHHHHTHHHHHHHHHHHTSCC--------SCCCSHHHHHHHHHHT-T-
T ss_pred             HHHHhhcc---ccch------------h----HHHHHHHHHHHHHHHHHHhhc--------ccccchhhhhcccccc-c-
Confidence            21111110   0000            0    012223333444443332221        2334444443333222 2 


Q ss_pred             CChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHH
Q 041858          303 LPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAAL  382 (528)
Q Consensus       303 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i  382 (528)
                      ...++....+..+++||++||+.+++|++++|++||++++++++|.+                           +..+++
T Consensus       219 ~~~~~~~~~~~~~~~ag~~tT~~~l~~~l~~l~~~p~~~~~~~~~~~---------------------------~~~~~~  271 (399)
T d1s1fa_         219 EITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPE---------------------------IRPRAI  271 (399)
T ss_dssp             SSCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------------GHHHHH
T ss_pred             cchHHHHHHHHHHHhhcccccccchhhhhhhhhhCchhhhhhhhhhc---------------------------cccccc
Confidence            34455566677888899999999999999999999999999988754                           457899


Q ss_pred             hhhccCCCCCccc-ccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCccccccC
Q 041858          383 SESLRLYPSVPIE-MKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVFN  461 (528)
Q Consensus       383 ~E~lRl~p~~~~~-~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG  461 (528)
                      .|++|+.|+.+.. .+|.+.+++.++||.|||||.|+++.+++||||++| +||++|+||||-          ..|+|||
T Consensus       272 ~e~~r~~p~~~~~~~~R~~~~~~~l~G~~ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~~~lpFG  340 (399)
T d1s1fa_         272 DELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP----------NPHVSFG  340 (399)
T ss_dssp             HHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC------------CCCCTTC
T ss_pred             ccccccccccccccccceeeeeeeccceeecCCCeecccccccccChhhc-CCccccCCCCCC----------CCCCCCC
Confidence            9999999998754 456666666679999999999999999999999999 999999999952          3589999


Q ss_pred             CCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCC-CCcccccceEEeecCcEEEEEE
Q 041858          462 AGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDED-HNVVPKVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       462 ~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~  517 (528)
                      .|+|.|+|++||++|+++++++|+++| ++++..+ .+..+..+..++....++|+|+
T Consensus       341 ~G~r~C~G~~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~~~~rg~~~lpv~~~  398 (399)
T d1s1fa_         341 FGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  398 (399)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             CCccCChhHHHHHHHHHHHHHHHHHHCCCCEECCCcccceeecCCcccCCeeEEEEEe
Confidence            999999999999999999999999999 8998654 3345666666776677999875


No 19 
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=100.00  E-value=4.6e-44  Score=343.88  Aligned_cols=364  Identities=14%  Similarity=0.171  Sum_probs=257.7

Q ss_pred             HHcCCeeEEEee-ecCCcceEEEcCcccHHHHHhcCCCCCCCChhhH--------H-HHHhhhcCceeecCChhHHHHHH
Q 041858           74 IKTGGTFYYRGV-WMGGAHGILTADPSNIEYMVKTNFSNFPKGKNYR--------E-RFQDLLGDGIFNADSETWKEQRQ  143 (528)
Q Consensus        74 ~~yG~v~~~~~~-~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~~~--------~-~~~~~~g~~~~~~~g~~~~~~R~  143 (528)
                      +.+||+.++..+ ...+.+..+|++++.+++|+.+. +.|+......        . ........+++..||+.|+++|+
T Consensus        19 r~~~p~~~~~~~~~~~~~~~w~vt~~~dv~~Vl~d~-~~f~s~~~~~~~~~~~~~~~~~~~~~~~~ll~~Dg~~H~~~R~   97 (394)
T d1lfka_          19 LAAGALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHTRLRR   97 (394)
T ss_dssp             HTSCSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGCCTTHHHHHHH
T ss_pred             HHhCCeeEEECCCCCCCceEEEeCCHHHHHHHHcCC-ccccCCccccccccccccccccchhhccchhhcCChhHHHHHH
Confidence            678998876322 23356778999999999999764 5553322110        0 01111234577889999999999


Q ss_pred             hhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchHHHHH
Q 041858          144 MAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDLPEVPFAKAF  223 (528)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~  223 (528)
                      ++++.|+.+++..+ .+.+++. .+.+.+   ++.+.|+++|+...+...+...+...+||.+.+.      ...+.+. 
T Consensus        98 ~l~~~fs~~~v~~~-~~~i~~~-~~~ll~---~l~~~g~~~Dl~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~-  165 (394)
T d1lfka_          98 KLTPGFTLRKMQRM-APYIEQI-VNDRLD---EMERAGSPADLIAFVADKVPGAVLCELVGVPRDD------RDMFMKL-  165 (394)
T ss_dssp             HHGGGGCHHHHHHH-HHHHHHH-HHHHHH---HHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGG------HHHHHHH-
T ss_pred             HhhhhcCHHHHHHH-HHHHHHH-HHHHHh---hhcccCCccchhhHhhhhhhheeeeeccCcchhh------HHHHHHH-
Confidence            99999999999887 6777666 344333   3334567899877765544455555578865331      1112111 


Q ss_pred             HHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHHhccccCCCC
Q 041858          224 EEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLMDTEEKNGHL  303 (528)
Q Consensus       224 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~l  303 (528)
                            ...... .           ...........+.+.+++.+.++++++...        .+..........  ..+
T Consensus       166 ------~~~~~~-~-----------~~~~~~~~~~~~~l~~~l~~~i~~~r~~~~--------~~~~~~~~~~~~--~~~  217 (394)
T d1lfka_         166 ------CHGHLD-A-----------SLSQKRRAALGDKFSRYLLAMIARERKEPG--------EGMIGAVVAEYG--DDA  217 (394)
T ss_dssp             ------HHHTTC-T-----------TSCHHHHHHHHHHHHHHHHHHHHHHHHSCC--------SSHHHHHHHHHG--GGS
T ss_pred             ------Hhhccc-c-----------cchhHHHHHHHHHHHHHHHHHHHHhhhccc--------cccchhhhhccc--CCC
Confidence                  111110 0           012233445667788888888887776532        222222221111  227


Q ss_pred             ChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhcChhHHHHHh
Q 041858          304 PDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKKMVYLHAALS  383 (528)
Q Consensus       304 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~  383 (528)
                      +++++..++..+++||++||+.+++|.+++++.||+.+++++++.                           .++..++.
T Consensus       218 ~~~el~~~~~~~~~ag~~tt~~~~~~~~~~l~~~~~~~~~~~~~~---------------------------~~~~~~~~  270 (394)
T d1lfka_         218 TDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDE---------------------------QSAQRAVD  270 (394)
T ss_dssp             CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCH---------------------------HHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhhccchHHHHHHHHHHhhcchhhhhhhcccc---------------------------cccccchh
Confidence            999999999999999999999999999999999999876643332                           24578999


Q ss_pred             hhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCCccccccCCC
Q 041858          384 ESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQFKYAVFNAG  463 (528)
Q Consensus       384 E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~~~~~~FG~G  463 (528)
                      |.+|+.++.....++++.++..++||.||+|+.|+++.+++||||++| +||++|+|||+          ...|+|||.|
T Consensus       271 e~~r~~~~~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~----------~~~~lpFG~G  339 (394)
T d1lfka_         271 ELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTRE----------PIPHVAFGHG  339 (394)
T ss_dssp             HHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSC----------CCCCCTTCCS
T ss_pred             cccccccccccceeeccccCeeecCceeccCCccccccccccCCcccc-cChhhcCCCCC----------CCCCCCCCCC
Confidence            999999887777777777777789999999999999999999999999 99999999994          2348999999


Q ss_pred             CcccccHHHHHHHHHHHHHHHhhce-eEEeeC-CCCcccccceEEeecCcEEEEE
Q 041858          464 PRLCLGKKFAYMQMKMVAASILLRY-SVKVDE-DHNVVPKVTTTLYVKNGLMVTL  516 (528)
Q Consensus       464 ~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~-~~~~~~~~~~~~~~~~~~~v~~  516 (528)
                      +|.|+|++||.+|++++|+.||++| ++++++ ..+.++..+.+++....++|++
T Consensus       340 ~r~C~G~~lA~~e~~~~l~~Ll~~f~~~~l~~p~~~~~~~~~~~~~g~~~lpv~~  394 (394)
T d1lfka_         340 VHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW  394 (394)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred             CcCCchHHHHHHHHHHHHHHHHHhCCCCEECCCcCcceeecCCCCCCCeeeeeeC
Confidence            9999999999999999999999999 999864 3445666665555555566653


No 20 
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=100.00  E-value=3e-43  Score=334.20  Aligned_cols=354  Identities=16%  Similarity=0.189  Sum_probs=234.4

Q ss_pred             HHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh-----hHHHHH------hhhcCceeecC
Q 041858           66 YDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN-----YRERFQ------DLLGDGIFNAD  134 (528)
Q Consensus        66 ~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~-----~~~~~~------~~~g~~~~~~~  134 (528)
                      +.++++++ ++|||+..     +  +..+|++++.|++++.+. ..|+....     ......      ...+.+++..+
T Consensus         2 Y~~~~~lR-~~~Pv~~~-----~--~~w~vt~~~di~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~d   72 (367)
T d1ue8a_           2 YDWFKQMR-KESPVYYD-----G--KVWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD   72 (367)
T ss_dssp             HHHHHHHH-HHCSEEEC-----S--SCEEECCHHHHHHHHTCT-TTEECCCSSTTTTHHHHHTTCCCCCCGGGSSGGGCC
T ss_pred             cHHHHHHH-hcCCEEee-----C--CEEEECCHHHHHHHhcCC-ccccCCccccCccccccccccccccccccccccccC
Confidence            45677775 57998743     3  467889999999999765 44432211     111110      11224577789


Q ss_pred             ChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCC
Q 041858          135 SETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDL  214 (528)
Q Consensus       135 g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~  214 (528)
                      |+.|+++|+++.+.|+.+.+..   +.+++. .+.+   +++   -++.+|+...+.......+...++|.+..      
T Consensus        73 g~~H~~~R~~~~~~f~~~~l~~---~~i~~~-~~~l---l~~---l~~~~d~~~~~~~~~~~~~~~~~lg~~~~------  136 (367)
T d1ue8a_          73 PPLHDELRNLTADAFNPSNLPV---DFVREV-TVKL---LSE---LDEEFDVIESFAIPLPILVISKMLGINPD------  136 (367)
T ss_dssp             TTHHHHHHHHHHGGGSGGGSCH---HHHHHH-HHHH---HTT---CCSEEEHHHHTTTHHHHHHHHHHHTCCCC------
T ss_pred             cHHHhhhHhcccccCChhhhch---HHHHHH-HHHH---Hhh---hccccchhhhhhhhhhhhhhhhccccccc------
Confidence            9999999999999999988763   334443 2232   222   24568887655555555555567886532      


Q ss_pred             CCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHH
Q 041858          215 PEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLM  294 (528)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  294 (528)
                       ...+..    .........  . .   ....         ....+.+.+++............     ....+.+....
T Consensus       137 -~~~~~~----~~~~~~~~~--~-~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  191 (367)
T d1ue8a_         137 -VKKVKD----WSDLVALRL--G-R---ADEI---------FSIGRKYLELISFSKKELDSRKG-----KEIVDLTGKIA  191 (367)
T ss_dssp             -HHHHHH----HHHHHHTTS--S-S---SSTT---------TCCCHHHHHHHHHHHHHHHHHTT-----CCCCSHHHHHH
T ss_pred             -chhHHH----HHHHHHhhc--c-h---hHHH---------HHHHHHHHHHHHHHHHHHHhhhc-----cccchhhhhhh
Confidence             111111    111111100  0 0   0000         01112222333333333333221     12223333222


Q ss_pred             hccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhc
Q 041858          295 DTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKK  374 (528)
Q Consensus       295 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  374 (528)
                      .     ..++++++..++..+++||+|||+.+++|+++.|+++|+.+....+                            
T Consensus       192 ~-----~~l~~~e~~~~~~~~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~----------------------------  238 (367)
T d1ue8a_         192 N-----SNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREK----------------------------  238 (367)
T ss_dssp             S-----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH----------------------------
T ss_pred             h-----ccCCHHHhhhhhhheeeeccccccccccchHHHhhhccccchhhhh----------------------------
Confidence            1     2389999999999999999999999999999999999987544322                            


Q ss_pred             ChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCC
Q 041858          375 MVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQ  454 (528)
Q Consensus       375 l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~  454 (528)
                        +..++|+|+||++|+++...|++..+.. ++|+.||+|+.|+++.+++||||++| +||++|+|+||..         
T Consensus       239 --~~~~ai~E~lR~~p~~~~~~r~~~~~~~-l~g~~ip~G~~V~~~~~~~~rdp~~~-~dP~~F~P~R~~~---------  305 (367)
T d1ue8a_         239 --GALKAVEEALRFSPPVMRTIRVTKEKVK-IRDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTPN---------  305 (367)
T ss_dssp             --CSHHHHHHHHHHSCSBCCEEEEESSCEE-ETTEEECSSCEEEECHHHHTTCTTTS-SSTTSCCTTCCSC---------
T ss_pred             --hhHHHHHhhhhhccccccccccccccce-eeeeeeecCCcccccccccccCcccC-CChhhcCCCCCCC---------
Confidence              1236899999999999988777666654 59999999999999999999999999 9999999999842         


Q ss_pred             ccccccCCCCcccccHHHHHHHHHHHHHHHhhceeEEeeCCCCcccccceEEeecCcEEEEEEE
Q 041858          455 FKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVDEDHNVVPKVTTTLYVKNGLMVTLKP  518 (528)
Q Consensus       455 ~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  518 (528)
                       .++|||+|+|.|+|+++|++|++++++.|+++|+++...+.+  ......++....++|++++
T Consensus       306 -~~l~FG~G~r~C~G~~lA~~e~~~~l~~Ll~rf~~~~~~~~~--~~~~~~~~g~~~l~Vr~~r  366 (367)
T d1ue8a_         306 -PHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKE--KIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             -CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEEE--ECSCSSBCCEEEEEEEEEE
T ss_pred             -CCCCCCCCCcCChhHHHHHHHHHHHHHHHHHhCCccccCCCc--cccCCCcCCCccceEEEEE
Confidence             389999999999999999999999999999999986543221  1112223344568898875


No 21 
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=100.00  E-value=8.5e-42  Score=324.60  Aligned_cols=352  Identities=19%  Similarity=0.238  Sum_probs=242.7

Q ss_pred             HHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhcCCCCCCCChh-hHHHHHhhh----------cCceeecC
Q 041858           66 YDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKTNFSNFPKGKN-YRERFQDLL----------GDGIFNAD  134 (528)
Q Consensus        66 ~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~~~~~f~~~~~-~~~~~~~~~----------g~~~~~~~  134 (528)
                      +.+++++ +++|||+..       .+..+|++++.+++++++. ..|+.... .........          +.+++..|
T Consensus         2 y~~~~~l-R~~~Pv~~~-------~~~w~vt~~~~v~~vl~d~-~~f~s~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~d   72 (366)
T d1io7a_           2 YDWFSEM-RKKDPVYYD-------GNIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD   72 (366)
T ss_dssp             HHHHHHH-HHHCSEEEC-------SSCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC
T ss_pred             cHHHHHH-HhcCCEEEe-------CCEEEEeCHHHHHHHhcCc-cccccCccccccccccccccccccccccccchhhCC
Confidence            3456666 556998632       2677889999999999765 55543321 111111111          23467789


Q ss_pred             ChhHHHHHHhhhhccchhhhhHhhHHHHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHhCCCCCCCcCCC
Q 041858          135 SETWKEQRQMAKSHMHSSRFMEHSLQTMQDLVQQKLLRLTEKLVKSGDRFDLQEVLLRFTLDSICTAALGVDPGCLAIDL  214 (528)
Q Consensus       135 g~~~~~~R~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~  214 (528)
                      |+.|+++|+++++.|+.+++..+ .+.+++. .+.+.+   ..  .+.++|+...+.......+....+|.+.+.     
T Consensus        73 g~~H~~~R~~~~~~f~~~~l~~~-~~~i~~~-a~~ll~---~~--~~~~~D~~~~~a~~~~~~~~~~~~g~~~~~-----  140 (366)
T d1io7a_          73 PPLHDELRSMSADIFSPQKLQTL-ETFIRET-TRSLLD---SI--DPREDDIVKKLAVPLPIIVISKILGLPIED-----  140 (366)
T ss_dssp             TTHHHHHHGGGTTTTCHHHHHHH-HHHHHHH-HHHHHH---TC--CTTSEEHHHHTTTHHHHHHHHHHHTCCGGG-----
T ss_pred             cHHHHHHHHhhhhhhhhcchHHH-HHHHHHH-HHHHHH---hc--ccccccccchhhhhhhheeeeeccCCchhH-----
Confidence            99999999999999999999888 6777665 444433   22  334578877777777777777888865331     


Q ss_pred             CCchHHHHHHHHHHHHHHhhcCCccccchhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCChhhHHHHHH
Q 041858          215 PEVPFAKAFEEATELSLFRFLLPPFIWKPMKLFGLGYERRLKIAIQIVQDFADKIVSDRRNKLTRLGSLIDQSDLLSRLM  294 (528)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  294 (528)
                           .+.+   ...........      ..  +....    ..   ...+. +.+...+...      ....+++....
T Consensus       141 -----~~~~---~~~~~~~~~~~------~~--~~~~~----~~---~~~~~-~~~~~~~~~~------~~~~~~~~~~~  190 (366)
T d1io7a_         141 -----KEKF---KEWSDLVAFRL------GK--PGEIF----EL---GKKYL-ELIGYVKDHL------NSGTEVVSRVV  190 (366)
T ss_dssp             -----HHHH---HHHGGGCTTSC------CC--TTCHH----HH---HHHHH-HHHHHHHHHT------TSSCHHHHHHH
T ss_pred             -----HHHH---HHHHHHHHhhc------cc--hhhHH----HH---HHHHH-HHhhhhhccc------cchhhhhhhhh
Confidence                 1111   11111110000      00  00000    01   11111 1122222211      23344544433


Q ss_pred             hccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcccccccccccCCCCCHHHhhc
Q 041858          295 DTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRVEINEILSHKKGIIQLQDNVIFTAEELKK  374 (528)
Q Consensus       295 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  374 (528)
                      ..     .++++|+.+++..+++||+|||+.+++|+++.++.+|+.+.+...+                           
T Consensus       191 ~~-----~l~~~e~~~~~~~~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~~---------------------------  238 (366)
T d1io7a_         191 NS-----NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREEN---------------------------  238 (366)
T ss_dssp             TS-----SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHHT---------------------------
T ss_pred             cc-----cCCHHHHHHHHHHHHHhccchhHHHHHHHHHHhhcccccccccccc---------------------------
Confidence            22     3899999999999999999999999999999999999987664332                           


Q ss_pred             ChhHHHHHhhhccCCCCCcccccccccCcccCCCeeecCCCEEEEeccccccCCCCCCCCCCCcCCCCcCCCCCccccCC
Q 041858          375 MVYLHAALSESLRLYPSVPIEMKQVEEDDAFPDGTMVKKGARVLYCTYSMARMESIWGKDCLEFKPERWIKDGQFVSENQ  454 (528)
Q Consensus       375 l~~l~a~i~E~lRl~p~~~~~~~~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~Rf~~~~~~~~~~~  454 (528)
                        ++..+++|++|+.|+++...|.+.++ +.++|+.||+|+.|+++.+++||||++| +||++|+||||.          
T Consensus       239 --l~~~~~ee~~r~~~~~~~~~R~~~~d-~~i~g~~ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------  304 (366)
T d1io7a_         239 --LYLKAIEEALRYSPPVMRTVRKTKER-VKLGDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRNP----------  304 (366)
T ss_dssp             --CHHHHHHHHHHHSCSBCCEEEEESSC-EEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCCS----------
T ss_pred             --hhhhhhhhhhhccccccccceecccc-ccccccccCCCCEEeeeecccccccccc-CchhhcCCCCCC----------
Confidence              45678899999999988877777665 5559999999999999999999999999 999999999973          


Q ss_pred             ccccccCCCCcccccHHHHHHHHHHHHHHHhhce-eEEeeCCCCcccccceEEeecCcEEEEEE
Q 041858          455 FKYAVFNAGPRLCLGKKFAYMQMKMVAASILLRY-SVKVDEDHNVVPKVTTTLYVKNGLMVTLK  517 (528)
Q Consensus       455 ~~~~~FG~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  517 (528)
                      ..|+|||.|+|.|+|++||++|++++|+.|+++| ++++.++...   ....++....++|+++
T Consensus       305 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~rf~~~~~~~~~~~---~~~~~~~~~~lpVrl~  365 (366)
T d1io7a_         305 NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKV---PNEVLNGYKRLVVRLK  365 (366)
T ss_dssp             CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEEEEEC---CCSSBCCEEEEEEEEE
T ss_pred             CCCCCCCCCccCChhHHHHHHHHHHHHHHHHHHCCCCeeCCCccC---CCCccCCCceeEEEEe
Confidence            2489999999999999999999999999999999 7888764321   2333454556888886


No 22 
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=46.90  E-value=10  Score=22.54  Aligned_cols=22  Identities=32%  Similarity=0.342  Sum_probs=18.2

Q ss_pred             HHHHhhChHHHHHHHHHHHHhh
Q 041858          331 FWLLHKNLEVETKIRVEINEIL  352 (528)
Q Consensus       331 l~~L~~~P~~~~~l~~Ei~~~~  352 (528)
                      ..+|..||++.+.+.++|.+.+
T Consensus        38 ~~~L~enpel~~eie~~ir~~l   59 (60)
T d1mo6a2          38 RNFLVENADVADEIEKKIKEKL   59 (60)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHCHHHHHHHHHHHHHHc
Confidence            4567899999999999988764


No 23 
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.00  E-value=34  Score=22.79  Aligned_cols=58  Identities=5%  Similarity=-0.180  Sum_probs=35.9

Q ss_pred             ccccchhhhhhhhhhHHHHHHHHHHHcCCeeEEEeeecCCcceEEEcCcccHHHHHhc
Q 041858           50 PVLGVLPSMFLHLNNMYDWATEALIKTGGTFYYRGVWMGGAHGILTADPSNIEYMVKT  107 (528)
Q Consensus        50 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~vvv~~p~~i~~il~~  107 (528)
                      -++||+..-.......-+.++.+-++||++..+....-.+.-+|-..+++.+......
T Consensus         8 L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~   65 (104)
T d1weya_           8 LIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLR   65 (104)
T ss_dssp             EEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHT
T ss_pred             EEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence            3677776543222334456888999999988774221122245666688888877754


No 24 
>d1xp8a2 d.48.1.1 (A:283-341) RecA protein, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=28.85  E-value=29  Score=20.41  Aligned_cols=22  Identities=18%  Similarity=0.270  Sum_probs=17.6

Q ss_pred             HHHHhhChHHHHHHHHHHHHhh
Q 041858          331 FWLLHKNLEVETKIRVEINEIL  352 (528)
Q Consensus       331 l~~L~~~P~~~~~l~~Ei~~~~  352 (528)
                      ..+|..||++.+.+.++|.+.+
T Consensus        37 ~~~L~enpel~~eie~~i~~~l   58 (59)
T d1xp8a2          37 IAYIAERPEMEQEIRDRVMAAI   58 (59)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCHHHHHHHHHHHHHHh
Confidence            4578899999999988887653


No 25 
>d1aisa2 d.129.1.1 (A:93-181) TATA-box binding protein (TBP), C-terminal domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=26.02  E-value=17  Score=23.66  Aligned_cols=39  Identities=28%  Similarity=0.353  Sum_probs=24.5

Q ss_pred             CCcCCCCcCCCCCccccCCccccccCCCCccccc-HHHHH
Q 041858          436 LEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLG-KKFAY  474 (528)
Q Consensus       436 ~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G-~~~A~  474 (528)
                      .+|+||||=.---....+....+-|..|+=.|.| +....
T Consensus        35 ~~Y~Pe~fpgli~R~~~p~~t~lIF~SGKivitGaks~~~   74 (89)
T d1aisa2          35 CEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEAD   74 (89)
T ss_dssp             EECCTTTCSSEEEEETTTTEEEEECTTSEEEEEEESSHHH
T ss_pred             cEECcccCceEEEEEcCCcEEEEEEcCCEEEEEccCCHHH
Confidence            5789999842100012234567889999999998 44433


No 26 
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.96  E-value=36  Score=20.04  Aligned_cols=22  Identities=23%  Similarity=0.250  Sum_probs=17.6

Q ss_pred             HHHHHhhChHHHHHHHHHHHHh
Q 041858          330 FFWLLHKNLEVETKIRVEINEI  351 (528)
Q Consensus       330 ~l~~L~~~P~~~~~l~~Ei~~~  351 (528)
                      +..+|..||++.+++.++|.+.
T Consensus        37 ~~~~L~enpel~~eie~~ire~   58 (60)
T d1u94a2          37 ATAWLKDNPETAKEIEKKVREL   58 (60)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCHHHHHHHHHHHHHH
Confidence            3457789999999998888764


No 27 
>d1mp9a2 d.129.1.1 (A:97-197) TATA-box binding protein (TBP), C-terminal domain {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=25.95  E-value=19  Score=24.05  Aligned_cols=60  Identities=18%  Similarity=0.185  Sum_probs=34.6

Q ss_pred             CCcCCCCcCCCCCccccCCccccccCCCCccccc-HHHHHHH-HHHHHHHHhhcee-EEeeCC
Q 041858          436 LEFKPERWIKDGQFVSENQFKYAVFNAGPRLCLG-KKFAYMQ-MKMVAASILLRYS-VKVDED  495 (528)
Q Consensus       436 ~~F~P~Rf~~~~~~~~~~~~~~~~FG~G~r~C~G-~~~A~~~-~~~~l~~ll~~f~-~~~~~~  495 (528)
                      .+|+||||=.---....+....+-|+.|+=.|.| +...... ..--+..+|.+|+ .+..++
T Consensus        35 ~~YePe~fpgli~R~~~pk~t~lIF~SGKivitGaks~~~~~~a~~~i~~~L~~~~~~~~~~~   97 (101)
T d1mp9a2          35 NMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVELDCVKPVEE   97 (101)
T ss_dssp             EECCTTTCSSEEEEETTTTEEEEECTTSEEEEEEESSHHHHHHHHHHHHHHHHHTTCEECTTS
T ss_pred             CEECcccCCeEEEEecCCcEEEEEEcCCEEEEEccCCHHHHHHHHHHHHHHHHHhCCCCcCCc
Confidence            4778888842100011233467789999999998 4443332 3334556677776 454443


No 28 
>d1nija2 d.237.1.1 (A:224-318) Hypothetical protein YjiA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.16  E-value=64  Score=20.83  Aligned_cols=30  Identities=17%  Similarity=0.533  Sum_probs=22.8

Q ss_pred             hhHHHHHHHHHHHcCC-eeEEEee-ecCCcce
Q 041858           63 NNMYDWATEALIKTGG-TFYYRGV-WMGGAHG   92 (528)
Q Consensus        63 ~~~~~~~~~~~~~yG~-v~~~~~~-~~~~~~~   92 (528)
                      .++..|+..+...+|+ +++++|+ ++.+.+.
T Consensus        15 ~~f~~~l~~ll~~~~~~ilR~KG~v~~~~~~~   46 (95)
T d1nija2          15 SEVSRVMENLLLESADKLLRYKGMLWIDGEPN   46 (95)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECBTTCSE
T ss_pred             HHHHHHHHHHHHhcCCCEEEEEEEEEeccCCc
Confidence            4577889999899996 9999987 5555443


No 29 
>d1nrja_ d.110.4.4 (A:) Srx domain of the signal recognition particle receptor alpha-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.24  E-value=8  Score=27.33  Aligned_cols=23  Identities=30%  Similarity=0.593  Sum_probs=21.3

Q ss_pred             cccccHHHHHHHHHHHHHHHhhc
Q 041858          465 RLCLGKKFAYMQMKMVAASILLR  487 (528)
Q Consensus       465 r~C~G~~~A~~~~~~~l~~ll~~  487 (528)
                      -+|.|+.||+..+-.++.+|+..
T Consensus        18 yN~l~kKfsE~qiN~fIShLiss   40 (155)
T d1nrja_          18 YNCLGKKFSEIQINSFISQLITS   40 (155)
T ss_dssp             EETTSCCCCHHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            58999999999999999999974


No 30 
>d2vgna2 c.55.4.2 (A:136-277) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=22.28  E-value=77  Score=22.45  Aligned_cols=57  Identities=18%  Similarity=0.074  Sum_probs=36.0

Q ss_pred             CChhhHHHHHHhccccCCCCChhhHHHHHHhhheechhchHHHHHHHHHHHhhChHHHHHHHH
Q 041858          284 IDQSDLLSRLMDTEEKNGHLPDKYYRDFSVSFILAGRDTTSVALTWFFWLLHKNLEVETKIRV  346 (528)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~  346 (528)
                      ....++++++.+....   .....+..+.-.++.+-   |+++--..+.+++++|++++++.+
T Consensus        83 f~K~~F~~yl~~~~~~---~~~k~i~~~k~k~v~v~---tSsg~~~gL~EvL~~~~v~~~l~d  139 (142)
T d2vgna2          83 FYAKILMDKIFQYAEE---EHNKKILDNKGMFFIAH---CSTGYLQGINEVLKNPLYASKLQD  139 (142)
T ss_dssp             THHHHHHHHHHHHHHH---TTCHHHHTTGGGEEEEE---CSCSSTHHHHHHHHCGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHhhh---hhhhhHHhccCeEEEEE---cCCCcHHHHHHHHcCHHHHHHHhh
Confidence            3456788877665543   34556665544454432   333444589999999999888753


Done!