BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041860
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 48 DVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFDHE-GALTIPCRPSE 106
D +G+ AV G + KRFVI +SY+ P F LL QA EE+G+DH G LTIPC
Sbjct: 16 DAPKGYLAVYV--GEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEV 73
Query: 107 LERI 110
+RI
Sbjct: 74 FQRI 77
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 48 DVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFDHE-GALTIPCRPSE 106
DV +G+ AV G + +RF I +SYL P F LL QA EE+G+DH G LTIPC+ E
Sbjct: 25 DVPKGYAAVYV--GDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 82
Query: 107 LERILA 112
+ A
Sbjct: 83 FLNVTA 88
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 48 DVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFDHE-GALTIPC 102
D +G+ AV G + KRFVI +SYL P F LL QA EE+G+DH G LTIPC
Sbjct: 16 DAPKGYLAVYV--GEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 48 DVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFDHE-GALTIPCRPSE 106
D +G+ AV G KRFVI +S+L P+F LL QA EE+G+DH G LTIPC
Sbjct: 24 DAPKGYLAVYV--GENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDL 81
Query: 107 LERILA 112
+ I +
Sbjct: 82 FQHITS 87
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 48 DVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFDH-EGALTIPCRPSE 106
DV++G+ AV G + +RFVI +SYL P F LL QA EE+G+ H G LTIPC
Sbjct: 24 DVEKGYLAVYV--GEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDV 81
Query: 107 LERILA 112
+ I +
Sbjct: 82 FQHITS 87
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 48 DVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFDHE-GALTIPCRPSE 106
+V +G+ V G + +RF+I +SYL P F LL QA EE+G+DH G LTIPC+ E
Sbjct: 24 EVPKGYLVVYV--GDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDE 81
Query: 107 L 107
Sbjct: 82 F 82
>sp|B8HSA9|ASSY_CYAP4 Argininosuccinate synthase OS=Cyanothece sp. (strain PCC 7425 /
ATCC 29141) GN=argG PE=3 SV=1
Length = 401
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 24 VEKIHKSLLMGRKSNSYCDDYVPQDVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLL 83
+E I + L S D +KE FA I + + R+ +S + L P+ +LL
Sbjct: 46 LEPIRQKALNSGAEISLVADAKDSFIKEYAFAAIQANALYENRYPLSTA-LARPLIAKLL 104
Query: 84 EQAAEEYGFD 93
AA EYG D
Sbjct: 105 VDAAAEYGAD 114
>sp|Q117P0|ASSY_TRIEI Argininosuccinate synthase OS=Trichodesmium erythraeum (strain
IMS101) GN=argG PE=3 SV=1
Length = 400
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 24 VEKIHKSLLMGRKSNSYCDDYVPQDVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLL 83
+E + K L S D + +KE F I + + R+ ++ + L P+ ++L
Sbjct: 46 LEGVRKKALDSGAVESLVIDVIEPLIKEYAFPAIQANALYENRYPLATA-LARPLIAKIL 104
Query: 84 EQAAEEYGFD 93
+AAE+YG D
Sbjct: 105 VEAAEKYGAD 114
>sp|B0JM14|ASSY_MICAN Argininosuccinate synthase OS=Microcystis aeruginosa (strain
NIES-843) GN=argG PE=3 SV=1
Length = 401
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 49 VKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFD 93
VKE F I + + R+ +S + L P+ +LL +AAE+YG D
Sbjct: 71 VKEYAFPSIQANALYENRYPLSTA-LARPLIAKLLVEAAEKYGAD 114
>sp|A0RNN3|TRPC_CAMFF Indole-3-glycerol phosphate synthase OS=Campylobacter fetus
subsp. fetus (strain 82-40) GN=trpC PE=3 SV=1
Length = 258
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 17 IVKLKIAVEKIHKSLLMGRKSNSYCDDYVPQDVKE 51
I K KI +E I ++L + R N+ + Y+P+DVK+
Sbjct: 7 ISKTKINLENIKENLPLCRLENALTNSYIPRDVKQ 41
>sp|Q3MBE6|ASSY_ANAVT Argininosuccinate synthase OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=argG PE=3 SV=1
Length = 400
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 24 VEKIHKSLLMGRKSNSYCDDYVPQDVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLL 83
+E I + L S S D +K+ F I + + R+ + + L P+ ++L
Sbjct: 46 LEPIREKALKSGASESLVADVKESFIKDYAFPAIQANALYENRYPLGTA-LARPLIAKIL 104
Query: 84 EQAAEEYGFD 93
+AAE+YG D
Sbjct: 105 VEAAEKYGAD 114
>sp|B1WTK3|ASSY_CYAA5 Argininosuccinate synthase OS=Cyanothece sp. (strain ATCC 51142)
GN=argG PE=3 SV=1
Length = 400
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 39 SYCDDYVPQDVKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFD 93
S +D + V + F I + + R+ +S + L P+ +LL +AAE+YG D
Sbjct: 61 SLVEDATAEFVTDYAFKAIKANALYESRYPLSTA-LARPLIAKLLVEAAEKYGAD 114
>sp|P77973|ASSY_SYNY3 Argininosuccinate synthase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=argG PE=1 SV=1
Length = 400
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 49 VKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFD 93
VKE F I + + R+ +S + L P+ ++L +AAE+YG D
Sbjct: 71 VKEYAFRSIQANALYENRYPLSTA-LARPLIAKMLVEAAEKYGAD 114
>sp|B7JVH4|ASSY_CYAP8 Argininosuccinate synthase OS=Cyanothece sp. (strain PCC 8801)
GN=argG PE=3 SV=1
Length = 399
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 49 VKEGHFAVIAVDGHQQKRFVISLSYLTHPMFLRLLEQAAEEYGFD 93
V E F I + + R+ +S + L P+ +LL +AAE+YG D
Sbjct: 71 VTEYAFRAIKANALYENRYPLSTA-LARPLIAKLLVEAAEKYGAD 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,326,060
Number of Sequences: 539616
Number of extensions: 1761097
Number of successful extensions: 3961
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3951
Number of HSP's gapped (non-prelim): 16
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)