Your job contains 1 sequence.
>041861
MIRLVYNSFLADFHLCYGYWRKACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLASEVP
PDGHRKSEYQEEK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041861
(73 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170453 - symbol:PRP39-2 species:3702 "Arabido... 148 3.8e-09 1
DICTYBASE|DDB_G0283307 - symbol:prpf39 "pre-mRNA processi... 111 2.1e-05 1
ASPGD|ASPL0000046692 - symbol:AN1635 species:162425 "Emer... 102 0.00015 1
FB|FBgn0039600 - symbol:CG1646 species:7227 "Drosophila m... 101 0.00041 1
>TAIR|locus:2170453 [details] [associations]
symbol:PRP39-2 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR003107 SMART:SM00386 EMBL:CP002688 GO:GO:0005622
GO:GO:0006396 KO:K13217 IPI:IPI00548633 RefSeq:NP_199452.2
UniGene:At.29958 ProteinModelPortal:F4KHG8 SMR:F4KHG8 PRIDE:F4KHG8
EnsemblPlants:AT5G46400.1 GeneID:834683 KEGG:ath:AT5G46400
OMA:HIKLFPH ArrayExpress:F4KHG8 Uniprot:F4KHG8
Length = 1036
Score = 148 (57.2 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 34/74 (45%), Positives = 42/74 (56%)
Query: 4 LVYNSFLADFHLCYGYWRKAC------CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
LVY++FL +F LC+GYWRK C L VEVFE+++Q+ATYS VW YC A
Sbjct: 69 LVYDAFLLEFPLCHGYWRKYAYHKIKLCTL-EDAVEVFERAVQAATYSVAVWLDYCAFAV 127
Query: 58 EVPPDGHRKSEYQE 71
D H S E
Sbjct: 128 AAYEDPHDVSRLFE 141
>DICTYBASE|DDB_G0283307 [details] [associations]
symbol:prpf39 "pre-mRNA processing factor 39"
species:44689 "Dictyostelium discoideum" [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003107 InterPro:IPR008847
InterPro:IPR011990 Pfam:PF05843 SMART:SM00386
dictyBase:DDB_G0283307 GO:GO:0005634 GenomeReviews:CM000153_GR
GO:GO:0006397 Gene3D:1.25.40.10 EMBL:AAFI02000052 KO:K13217
eggNOG:NOG298273 RefSeq:XP_639156.1 ProteinModelPortal:Q54R91
EnsemblProtists:DDB0233547 GeneID:8624026 KEGG:ddi:DDB_G0283307
InParanoid:Q54R91 OMA:ADHEYAH Uniprot:Q54R91
Length = 699
Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALL-----TRVVEVFEQSMQSATYSSDVWFHYC 53
IR VY+ FL +F LC+ YW++ T+ +E+FE+++ S +S D+W +YC
Sbjct: 57 IRKVYSEFLNEFPLCFLYWKRFADHEYAHNNTTQSIEIFEKAVSSIPHSVDIWLNYC 113
>ASPGD|ASPL0000046692 [details] [associations]
symbol:AN1635 species:162425 "Emericella nidulans"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005685 "U1 snRNP"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003107 InterPro:IPR011990 SMART:SM00386 EMBL:BN001307
GO:GO:0005622 GO:GO:0006396 eggNOG:COG0457 Gene3D:1.25.40.10
EMBL:AACD01000026 KO:K13217 HOGENOM:HOG000189748 OMA:ARYFERY
OrthoDB:EOG4DNJD8 RefSeq:XP_659239.1 ProteinModelPortal:Q5BCU5
EnsemblFungi:CADANIAT00008273 GeneID:2874721 KEGG:ani:AN1635.2
Uniprot:Q5BCU5
Length = 588
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K T + V+E+ + S + S D+W +YC
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISSSVDLWTNYCTFK 118
Query: 57 SEVPPD 62
+E D
Sbjct: 119 AETSHD 124
>FB|FBgn0039600 [details] [associations]
symbol:CG1646 species:7227 "Drosophila melanogaster"
[GO:0005685 "U1 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
SMART:SM00386 InterPro:IPR001623 EMBL:AE014297 Gene3D:1.25.40.10
SMART:SM00271 GO:GO:0000398 GO:GO:0000381 eggNOG:COG5107
GO:GO:0005685 GeneTree:ENSGT00390000005033 KO:K13217 EMBL:AY051737
RefSeq:NP_001097957.1 RefSeq:NP_001097958.1 RefSeq:NP_651634.1
RefSeq:NP_733256.2 RefSeq:NP_788753.1 RefSeq:NP_788754.2
UniGene:Dm.31288 ProteinModelPortal:Q7KRW8 SMR:Q7KRW8 IntAct:Q7KRW8
MINT:MINT-820225 STRING:Q7KRW8 PaxDb:Q7KRW8 PRIDE:Q7KRW8
EnsemblMetazoa:FBtr0085322 GeneID:43399 KEGG:dme:Dmel_CG1646
UCSC:CG1646-RB FlyBase:FBgn0039600 InParanoid:Q7KRW8 OMA:IRWENES
OrthoDB:EOG4ZKH2F PhylomeDB:Q7KRW8 GenomeRNAi:43399 NextBio:833726
Bgee:Q7KRW8 Uniprot:Q7KRW8
Length = 1066
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 399 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 453
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.134 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 73 73 0.00091 102 3 11 22 0.45 28
29 0.45 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 543 (58 KB)
Total size of DFA: 118 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.55u 0.11s 8.66t Elapsed: 00:00:00
Total cpu time: 8.55u 0.11s 8.66t Elapsed: 00:00:00
Start: Sat May 11 08:42:56 2013 End: Sat May 11 08:42:56 2013