BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041861
(73 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297843218|ref|XP_002889490.1| hypothetical protein ARALYDRAFT_333729 [Arabidopsis lyrata subsp.
lyrata]
gi|297335332|gb|EFH65749.1| hypothetical protein ARALYDRAFT_333729 [Arabidopsis lyrata subsp.
lyrata]
Length = 1328
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++Q TYS D+W HYC A
Sbjct: 121 IRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVQGVTYSVDIWLHYCTFA 180
>gi|147795953|emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]
Length = 826
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++Q TYS D+W HYC A
Sbjct: 215 IRRVYDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFA 274
>gi|297744213|emb|CBI37183.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++Q TYS D+W HYC A
Sbjct: 116 IRRVYDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFA 175
Query: 57 SEV--PPDGHRK 66
PD R+
Sbjct: 176 ISTYGDPDTIRR 187
>gi|356505060|ref|XP_003521310.1| PREDICTED: pre-mRNA-processing factor 39-like [Glycine max]
Length = 828
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++Q TYS D+W HYC A
Sbjct: 194 IRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFA 253
>gi|18379230|ref|NP_563700.1| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
gi|15810565|gb|AAL07170.1| unknown protein [Arabidopsis thaliana]
gi|20259567|gb|AAM14126.1| unknown protein [Arabidopsis thaliana]
gi|21593463|gb|AAM65430.1| unknown [Arabidopsis thaliana]
gi|332189531|gb|AEE27652.1| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
Length = 768
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++ TYS D+W HYC A
Sbjct: 121 IRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFA 180
>gi|356570672|ref|XP_003553509.1| PREDICTED: pre-mRNA-processing factor 39-like [Glycine max]
Length = 828
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++Q TYS D+W HYC A
Sbjct: 193 IRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFA 252
>gi|225437987|ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
Length = 832
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++Q TYS D+W HYC A
Sbjct: 194 IRRVYDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFA 253
>gi|255557433|ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
gi|223541164|gb|EEF42720.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
Length = 395
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 8/72 (11%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IRLVY+SFL++F LCYGYWRK + + +VV+VFE+++ SATYS D+W YC+
Sbjct: 53 IRLVYDSFLSEFPLCYGYWRKYVNHNIRLSTIDKVVQVFERAVLSATYSVDLWVDYCDFG 112
Query: 57 S---EVPPDGHR 65
+ E P D R
Sbjct: 113 TLSFEDPSDVRR 124
>gi|334182285|ref|NP_001184905.1| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
gi|332189533|gb|AEE27654.1| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
Length = 823
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++ TYS D+W HYC A
Sbjct: 121 IRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFA 180
>gi|3142300|gb|AAC16751.1| Contains similarity to pre-mRNA processing protein PRP39 gb|L29224
from S. cerevisiae. ESTs gb|R64908 and gb|T88158,
gb|N38703 and gb|AA651043 come from this gene
[Arabidopsis thaliana]
Length = 1345
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A + +VVEV+E+++ TYS D+W HYC A
Sbjct: 121 IRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFA 180
>gi|449459394|ref|XP_004147431.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
Length = 901
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 10/73 (13%)
Query: 2 IRLVYNSFLADFHLCYGYWRK------ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
I LVY+SFL++F LC+GYWRK C++ RVV+VFEQ++QSATYS +W YC+
Sbjct: 63 ISLVYDSFLSEFPLCHGYWRKYASHKTRLCSV-DRVVDVFEQAVQSATYSVGIWVDYCSF 121
Query: 56 ---ASEVPPDGHR 65
A E P D R
Sbjct: 122 SISAFEDPSDIRR 134
>gi|449527699|ref|XP_004170847.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
Length = 421
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 10/73 (13%)
Query: 2 IRLVYNSFLADFHLCYGYWRK------ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
I LVY+SFL++F LC+GYWRK C++ RVV+VFEQ++QSATYS +W YC+
Sbjct: 63 ISLVYDSFLSEFPLCHGYWRKYASHKTRLCSV-DRVVDVFEQAVQSATYSVGIWVDYCSF 121
Query: 56 ---ASEVPPDGHR 65
A E P D R
Sbjct: 122 SISAFEDPSDIRR 134
>gi|217075757|gb|ACJ86238.1| unknown [Medicago truncatula]
Length = 332
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
+R VY++FLA+F LCYGYW+K A +VVEV+E+++Q TYS D+W HYC
Sbjct: 190 MRRVYDAFLAEFPLCYGYWKKYADHEARLGSADKVVEVYERAVQGVTYSVDMWLHYC 246
>gi|357510169|ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncatula]
gi|355500388|gb|AES81591.1| Pre-mRNA-processing factor [Medicago truncatula]
Length = 838
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY++FLA+F LCYGYW+K A +VVEV+E+++Q TYS D+W HYC A
Sbjct: 184 MRRVYDAFLAEFPLCYGYWKKYADHEARLGSADKVVEVYERAVQGVTYSVDMWLHYCIFA 243
>gi|224070092|ref|XP_002303113.1| predicted protein [Populus trichocarpa]
gi|222844839|gb|EEE82386.1| predicted protein [Populus trichocarpa]
Length = 878
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FL +F LCYGYW+K A + +VVEV+E+++ TYS D+W HYC A
Sbjct: 241 IRKVYDAFLVEFPLCYGYWKKYADHEARLGFMDKVVEVYERAVLGVTYSVDIWLHYCMFA 300
>gi|449445628|ref|XP_004140574.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
gi|449487353|ref|XP_004157584.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
Length = 831
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
IR VY++FLA+F LCYGYW+K A +VVEV+E+++ TYS D+W HYC
Sbjct: 195 IRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYC 251
>gi|255571192|ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
gi|223534107|gb|EEF35824.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
Length = 829
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
IR VY++FLA+F LCYGYW+K A + ++VEV+E+++ TYS D+W HYC
Sbjct: 190 IRKVYDAFLAEFPLCYGYWKKYADHEARTGYMDKIVEVYERAVLGVTYSVDMWLHYC 246
>gi|148909353|gb|ABR17775.1| unknown [Picea sitchensis]
Length = 381
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K A ++VEV+E+++Q+ TYS D+W HY A
Sbjct: 259 IRKVYDAFLAEFPLCYGYWKKYADHEARSGSAEKIVEVYERAVQAVTYSVDIWMHYAIFA 318
>gi|115451479|ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group]
gi|108706795|gb|ABF94590.1| Pre-mRNA processing protein prp39, putative, expressed [Oryza
sativa Japonica Group]
gi|113547811|dbj|BAF11254.1| Os03g0210400 [Oryza sativa Japonica Group]
Length = 789
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY++FLA+F LC+GYW+K A +T+V+EV+E+++ + TYS D+W++YC A
Sbjct: 158 LRKVYDAFLAEFPLCFGYWKKYADHEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFA 217
>gi|218192314|gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indica Group]
Length = 789
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY++FLA+F LC+GYW+K A +T+V+EV+E+++ + TYS D+W++YC A
Sbjct: 158 LRKVYDAFLAEFPLCFGYWKKYADHEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFA 217
>gi|224129528|ref|XP_002320608.1| predicted protein [Populus trichocarpa]
gi|222861381|gb|EEE98923.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
IR VY++FL +F LCYGYW+K A + + VEV+E+++ TYS D+W HYC
Sbjct: 40 IRKVYDAFLGEFPLCYGYWKKYADHEARLGFMDKFVEVYERAVLGVTYSVDIWLHYC 96
>gi|242036533|ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [Sorghum bicolor]
gi|241919515|gb|EER92659.1| hypothetical protein SORBIDRAFT_01g043300 [Sorghum bicolor]
Length = 768
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY+SFLA+F LC+GYW+K A ++V+EV+E+++ + TYS D+W++YC A
Sbjct: 136 IRKVYDSFLAEFPLCFGYWKKYADHEARLDGASKVIEVYERAVLAVTYSVDIWYNYCQFA 195
>gi|297740633|emb|CBI30815.3| unnamed protein product [Vitis vinifera]
Length = 1195
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 5/61 (8%)
Query: 4 LVYNSFLADFHLCYGYWR-----KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLASE 58
LVY+SFL++F LCYGYWR K+ + +V+EV+E+++QSATYS +W YC+ +
Sbjct: 48 LVYDSFLSEFPLCYGYWRKYADHKSRLCTVDKVIEVYERAVQSATYSVGLWVDYCSFSMS 107
Query: 59 V 59
V
Sbjct: 108 V 108
>gi|413956609|gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
Length = 763
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY+SFL +F LC+GYW+K A + +V+EV+E+++ + TYS D+W++YC A
Sbjct: 136 IRKVYDSFLTEFPLCFGYWKKYADHEARLDGVNKVIEVYERAVLAVTYSVDIWYNYCQFA 195
>gi|359483599|ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
Length = 1179
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 5/61 (8%)
Query: 4 LVYNSFLADFHLCYGYWR-----KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLASE 58
LVY+SFL++F LCYGYWR K+ + +V+EV+E+++QSATYS +W YC+ +
Sbjct: 93 LVYDSFLSEFPLCYGYWRKYADHKSRLCTVDKVIEVYERAVQSATYSVGLWVDYCSFSMS 152
Query: 59 V 59
V
Sbjct: 153 V 153
>gi|413956610|gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
gi|413956611|gb|AFW89260.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
Length = 407
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY+SFL +F LC+GYW+K A + +V+EV+E+++ + TYS D+W++YC A
Sbjct: 136 IRKVYDSFLTEFPLCFGYWKKYADHEARLDGVNKVIEVYERAVLAVTYSVDIWYNYCQFA 195
>gi|357113467|ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-like [Brachypodium
distachyon]
Length = 724
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY++FLA+F LC+GYW+K +++V+EVFE+++ + TYS D+W +YC A
Sbjct: 90 MRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVSKVIEVFERAVLAVTYSVDIWLNYCQFA 149
>gi|302805941|ref|XP_002984721.1| hypothetical protein SELMODRAFT_120899 [Selaginella moellendorffii]
gi|300147703|gb|EFJ14366.1| hypothetical protein SELMODRAFT_120899 [Selaginella moellendorffii]
Length = 570
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALL-----TRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR+ Y++FLA+F LCYGYW+K L +++EV+E+++++ +S D+W HYC A
Sbjct: 40 IRVCYDTFLAEFPLCYGYWKKYADFELRLGSPEKIIEVYERAVKAVAHSVDIWVHYCAYA 99
Query: 57 SE-VPPD 62
+E PP+
Sbjct: 100 AEKFPPE 106
>gi|302794085|ref|XP_002978807.1| hypothetical protein SELMODRAFT_109541 [Selaginella moellendorffii]
gi|300153616|gb|EFJ20254.1| hypothetical protein SELMODRAFT_109541 [Selaginella moellendorffii]
Length = 589
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALL-----TRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR+ Y++FLA+F LCYGYW+K L +++EV+E+++++ +S D+W HYC A
Sbjct: 59 IRVCYDTFLAEFPLCYGYWKKYADFELRLGSPEKIIEVYERAVKAVAHSVDIWVHYCAYA 118
Query: 57 SE-VPPD 62
+E PP+
Sbjct: 119 TEKFPPE 125
>gi|302762398|ref|XP_002964621.1| hypothetical protein SELMODRAFT_61333 [Selaginella moellendorffii]
gi|300168350|gb|EFJ34954.1| hypothetical protein SELMODRAFT_61333 [Selaginella moellendorffii]
Length = 570
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y++FLA+F LCYGYW+K A + +EV+E+++++ T+S D+W HYC+ S
Sbjct: 48 RQCYDTFLAEFPLCYGYWKKYADHENRLATPEKTIEVYERAVKAVTHSVDIWVHYCSFVS 107
Query: 58 EVPPD 62
P+
Sbjct: 108 AAKPE 112
>gi|302815681|ref|XP_002989521.1| hypothetical protein SELMODRAFT_129910 [Selaginella moellendorffii]
gi|300142699|gb|EFJ09397.1| hypothetical protein SELMODRAFT_129910 [Selaginella moellendorffii]
Length = 592
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y++FLA+F LCYGYW+K A + +EV+E+++++ T+S D+W HYC+ S
Sbjct: 48 RQCYDTFLAEFPLCYGYWKKYADHENRLATPEKTIEVYERAVKAVTHSVDIWVHYCSFVS 107
Query: 58 EVPPD 62
P+
Sbjct: 108 AAKPE 112
>gi|222624432|gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japonica Group]
Length = 789
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY++FLA+F L +GYW+K A +T+V+EV+E+++ + TYS D+W++YC A
Sbjct: 158 LRKVYDAFLAEFPLGFGYWKKYADHEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFA 217
>gi|30694946|ref|NP_199452.2| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
gi|332007996|gb|AED95379.1| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
Length = 1036
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 4 LVYNSFLADFHLCYGYWRK------ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
LVY++FL +F LC+GYWRK C L VEVFE+++Q+ATYS VW YC A
Sbjct: 69 LVYDAFLLEFPLCHGYWRKYAYHKIKLCTL-EDAVEVFERAVQAATYSVAVWLDYCAFAV 127
Query: 58 EVPPDGH 64
D H
Sbjct: 128 AAYEDPH 134
>gi|10177721|dbj|BAB11095.1| unnamed protein product [Arabidopsis thaliana]
Length = 1022
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 4 LVYNSFLADFHLCYGYWRK------ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
LVY++FL +F LC+GYWRK C L VEVFE+++Q+ATYS VW YC A
Sbjct: 69 LVYDAFLLEFPLCHGYWRKYAYHKIKLCTL-EDAVEVFERAVQAATYSVAVWLDYCAFAV 127
Query: 58 EVPPDGH 64
D H
Sbjct: 128 AAYEDPH 134
>gi|357519211|ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor [Medicago truncatula]
Length = 1215
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 4 LVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+VY FL++F LC+GYWRK + + +VVEVFEQ++ +ATYS +W YC+
Sbjct: 72 VVYKHFLSEFPLCHGYWRKYAAHMTQLSTMDKVVEVFEQAVSAATYSVGMWVDYCSFG 129
>gi|332806933|gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
Length = 823
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FL +F LC+GYW+K A +V+EV+E+++ + TYS D+W +YC A
Sbjct: 189 IRKVYDAFLVEFPLCFGYWKKYADHEARLDSANKVLEVYERAILAVTYSVDIWLYYCLFA 248
>gi|168021369|ref|XP_001763214.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685697|gb|EDQ72091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 772
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
I Y++FLA F LCYGYW+K A +VV+V+E+++++ TYS D+W +YC A
Sbjct: 103 IEKAYDAFLAQFPLCYGYWKKYADNEAKLGSSEKVVDVYERAVKAVTYSVDMWMNYCIYA 162
Query: 57 SE 58
E
Sbjct: 163 ME 164
>gi|168010656|ref|XP_001758020.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690897|gb|EDQ77262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 663
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALLT-----RVVEVFEQSMQSATYSSDVWFHYCNLA 56
+ Y++FLA+F LCYGYW+K L +VV+V+E+++++ TYS D+W +YC A
Sbjct: 41 VEKTYDAFLAEFPLCYGYWKKYADHELKLGSSEKVVDVYERAVKAVTYSVDMWMNYCTYA 100
Query: 57 SE 58
E
Sbjct: 101 ME 102
>gi|326496561|dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 437
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LC+GYW+K + +V EV+E+++ + TYS D+W +YC A
Sbjct: 179 IRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVNKVFEVYERAVLAVTYSVDIWCNYCQFA 238
>gi|168042206|ref|XP_001773580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675119|gb|EDQ61618.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 678
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
I Y+ FL +F LCYGYW+K + V+V+E++++S TYS D+W HYC A
Sbjct: 40 IEKAYDVFLGEFPLCYGYWKKYADHETKLGSPEKTVDVYERAVKSVTYSVDIWMHYCAYA 99
Query: 57 SE 58
E
Sbjct: 100 ME 101
>gi|303283896|ref|XP_003061239.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457590|gb|EEH54889.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
IR VY++FLA+F LCYGYW+K A + EV+E+ + + YS D+W HYC
Sbjct: 6 IRAVYDAFLAEFPLCYGYWKKYADAETRLAGGAKTGEVYERGVAAVPYSVDLWTHYC 62
>gi|297794621|ref|XP_002865195.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297311030|gb|EFH41454.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1035
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 4 LVYNSFLADFHLCYGYWRKAC---CALLTR--VVEVFEQSMQSATYSSDVWFHYCNLASE 58
LVY++FL +F LC+GYWRK L T +EVFE+++Q+ATYS VW YC A
Sbjct: 68 LVYDAFLLEFPLCHGYWRKYAYHKIKLCTSEDALEVFERAVQAATYSVAVWLDYCAFAVA 127
Query: 59 VPPDGH 64
D H
Sbjct: 128 AYEDPH 133
>gi|222640468|gb|EEE68600.1| hypothetical protein OsJ_27131 [Oryza sativa Japonica Group]
Length = 1199
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 1 MIRLVYNSFLADFHLCYGYW-----RKACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
+I LVY+SFL +F LCYGYW KA +V EV+EQ++Q+ +S D+W YC
Sbjct: 71 VIDLVYHSFLLEFPLCYGYWIKYAAHKARLCTNKQVEEVYEQAVQAVPHSIDLWVSYCGF 130
Query: 56 A 56
A
Sbjct: 131 A 131
>gi|242081343|ref|XP_002445440.1| hypothetical protein SORBIDRAFT_07g019230 [Sorghum bicolor]
gi|241941790|gb|EES14935.1| hypothetical protein SORBIDRAFT_07g019230 [Sorghum bicolor]
Length = 938
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 1 MIRLVYNSFLADFHLCYGYW-----RKACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
+I LVY+SFL +F LCYGYW KA VV+V+EQ++ + +S D+W YC
Sbjct: 24 VISLVYHSFLLEFPLCYGYWIKYAAHKARLCTTRYVVDVYEQAVHAVPHSVDIWVSYCGF 83
Query: 56 A 56
Sbjct: 84 G 84
>gi|102139749|gb|ABF69956.1| pre-mRNA processing protein-related [Musa acuminata]
Length = 519
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 4 LVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCN---L 55
LVY++FL+++ LCYGYW K A L V E++E+++Q+ YS ++W YC L
Sbjct: 18 LVYDAFLSEYPLCYGYWNKYASNRARLCTLHEVEEIYERAVQAIPYSVNLWVSYCTFGAL 77
Query: 56 ASEVPPDGHR 65
+ E P D R
Sbjct: 78 SFEDPADVRR 87
>gi|440792674|gb|ELR13882.1| hypothetical protein ACA1_363770 [Acanthamoeba castellanii str.
Neff]
Length = 640
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 2 IRLVYNSFLADFHLCYGYWRK------ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
IR Y+ FLA+F LCY YW++ A + +V EV+++S+++ YS D+W +YC
Sbjct: 68 IREAYDGFLAEFPLCYVYWKRYADHEAAAGSAQDKVSEVYQRSLEAFPYSVDLWTYYCTY 127
Query: 56 ASE 58
+E
Sbjct: 128 LAE 130
>gi|159482238|ref|XP_001699178.1| nuclear pre-mRNA splicing factor and U1 snRNP component
[Chlamydomonas reinhardtii]
gi|158273025|gb|EDO98818.1| nuclear pre-mRNA splicing factor and U1 snRNP component
[Chlamydomonas reinhardtii]
Length = 476
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y++FLA++ LCYGYW+K A L V+E+ + + YS+D+W HY
Sbjct: 71 VRAAYDAFLAEYPLCYGYWKKYADAELRHGSAEAAAAVYERGVVATPYSADLWGHYAAFK 130
Query: 57 SEVP 60
+P
Sbjct: 131 KGLP 134
>gi|218201077|gb|EEC83504.1| hypothetical protein OsI_29060 [Oryza sativa Indica Group]
Length = 1192
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 1 MIRLVYNSFLADFHLCYGYW-----RKACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
+I LVY++FL +F L YGYW KA V EV+EQ++Q+ +S D+W YC
Sbjct: 69 VIDLVYHNFLLEFPLFYGYWIKYAAHKARLCTNKEVEEVYEQAVQAVPHSIDLWVSYCGF 128
Query: 56 A 56
A
Sbjct: 129 A 129
>gi|414870601|tpg|DAA49158.1| TPA: hypothetical protein ZEAMMB73_697187 [Zea mays]
Length = 553
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 1 MIRLVYNSFLADFHLCYGYW-----RKACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
++ LVY++FL +F LCYGYW KA V++V+EQ++ + +S D+W +YC
Sbjct: 74 VMSLVYHNFLLEFPLCYGYWIKYAAHKARLCTTRYVMDVYEQAVHAVPHSVDIWVNYCEF 133
Query: 56 A 56
Sbjct: 134 G 134
>gi|345498401|ref|XP_001607328.2| PREDICTED: pre-mRNA-processing factor 39-like [Nasonia vitripennis]
Length = 995
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCN 54
R YN FL + CYGYWRK RV VF+Q ++S + S D+W HY N
Sbjct: 407 REAYNKFLERYPYCYGYWRKYADYEKKKGDPDRVQTVFDQGLKSISLSVDLWLHYIN 463
>gi|255079288|ref|XP_002503224.1| predicted protein [Micromonas sp. RCC299]
gi|226518490|gb|ACO64482.1| predicted protein [Micromonas sp. RCC299]
Length = 645
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR VY++FLA+F LCYGYW+K + A + V V+E++ + YS D+W + A
Sbjct: 70 IRAVYDAFLAEFPLCYGYWKKYADAESRLAGIDGVEHVYERATHAFPYSIDLWTQRASHA 129
Query: 57 SEVPPDGHRKSE 68
+ D + E
Sbjct: 130 IAMRRDAEKVRE 141
>gi|66810898|ref|XP_639156.1| tetratricopeptide-like helical domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467778|gb|EAL65794.1| tetratricopeptide-like helical domain-containing protein
[Dictyostelium discoideum AX4]
Length = 699
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
IR VY+ FL +F LC+ YW++ T+ +E+FE+++ S +S D+W +YC
Sbjct: 57 IRKVYSEFLNEFPLCFLYWKRFADHEYAHNNTTQSIEIFEKAVSSIPHSVDIWLNYC 113
>gi|326673854|ref|XP_003200013.1| PREDICTED: pre-mRNA-processing factor 39-like [Danio rerio]
Length = 707
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R N+FL + LCYGYW+K + EV EQ ++S S D+W HY NL
Sbjct: 102 RQALNAFLLRYPLCYGYWKKFADLERRAGHNEKAEEVCEQGLKSIPLSVDLWIHYINL 159
>gi|292621003|ref|XP_002664507.1| PREDICTED: pre-mRNA-processing factor 39-like [Danio rerio]
Length = 707
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R N+FL + LCYGYW+K + EV EQ ++S S D+W HY NL
Sbjct: 102 RQALNAFLLRYPLCYGYWKKFADLERRAGHNEKAEEVCEQGLKSIPLSVDLWIHYINL 159
>gi|260831274|ref|XP_002610584.1| hypothetical protein BRAFLDRAFT_117858 [Branchiostoma floridae]
gi|229295951|gb|EEN66594.1| hypothetical protein BRAFLDRAFT_117858 [Branchiostoma floridae]
Length = 689
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++F + CYGYW+K + + EV+E+ +++ S D+W HY N A+
Sbjct: 104 RRAFDAFFMRYPYCYGYWKKYADVEKKHGNIEQAQEVYERGLKAIPLSVDLWIHYINFAT 163
Query: 58 EV 59
EV
Sbjct: 164 EV 165
>gi|91086167|ref|XP_970329.1| PREDICTED: similar to PRP39 pre-mRNA processing factor 39 homolog
(yeast) [Tribolium castaneum]
gi|270010229|gb|EFA06677.1| hypothetical protein TcasGA2_TC009607 [Tribolium castaneum]
Length = 859
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y++FL+ + CYGYWRK + EVFE+ +++ S D+W HY
Sbjct: 277 REAYDAFLSHYPYCYGYWRKYADYEKRKGNKKKCEEVFERGLKAIPLSVDLWIHYLTYVK 336
Query: 58 EVPPDGHRKSEYQEEK 73
PD Q E+
Sbjct: 337 TTKPDDEDYIRSQFER 352
>gi|170671964|ref|NP_001116273.1| PRP39 pre-mRNA processing factor 39 homolog, gene 1 [Xenopus
(Silurana) tropicalis]
gi|115527578|gb|AAI24576.1| LOC100125120 protein [Xenopus (Silurana) tropicalis]
Length = 361
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R +++FLA + CYGYW+K + EV+ + +Q+ T S D+W HY N
Sbjct: 75 VRKAFDAFLAHYPYCYGYWKKYADLEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFL 134
Query: 57 SEV 59
E
Sbjct: 135 KET 137
>gi|328788481|ref|XP_392380.3| PREDICTED: pre-mRNA-processing factor 39-like [Apis mellifera]
Length = 1050
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 452 REAYTKFLDRYPYCYGYWRKFADYEKKKGNPDNVQRVFDQGLKAISLSVDLWLHYINHCK 511
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q EK
Sbjct: 512 TVYEKDEEKLREQYEK 527
>gi|380025687|ref|XP_003696600.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like
[Apis florea]
Length = 1028
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 430 REAYTKFLDRYPYCYGYWRKFADYEKKKGNPDNVQRVFDQGLKAISLSVDLWLHYINHCK 489
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q EK
Sbjct: 490 TVYEKDEEKLREQYEK 505
>gi|383863613|ref|XP_003707274.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 1 [Megachile
rotundata]
Length = 1036
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 438 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFDQGLKAISLSVDLWLHYINHCK 497
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 498 TVYEKDEEKLREQYER 513
>gi|383863615|ref|XP_003707275.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 2 [Megachile
rotundata]
Length = 1025
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 427 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFDQGLKAISLSVDLWLHYINHCK 486
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 487 TVYEKDEEKLREQYER 502
>gi|340713895|ref|XP_003395470.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 1 [Bombus
terrestris]
Length = 1040
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 442 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFDQGLKAISLSVDLWLHYINHCK 501
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 502 TVYEKDEEKLREQYER 517
>gi|340713897|ref|XP_003395471.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 2 [Bombus
terrestris]
Length = 1029
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 431 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFDQGLKAISLSVDLWLHYINHCK 490
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 491 TVYEKDEEKLREQYER 506
>gi|147906238|ref|NP_001089580.1| pre-mRNA-processing factor 39 [Xenopus laevis]
gi|126352259|sp|Q4KLU2.1|PRP39_XENLA RecName: Full=Pre-mRNA-processing factor 39; AltName: Full=PRP39
homolog
gi|68533753|gb|AAH98999.1| MGC115228 protein [Xenopus laevis]
Length = 641
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++FLA + CYGYW+K + EV+ + +Q+ T S D+W HY N
Sbjct: 90 RKAFDAFLAHYPYCYGYWKKYADLEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFLK 149
Query: 58 EV--PPD 62
E P D
Sbjct: 150 ETLDPAD 156
>gi|242010269|ref|XP_002425891.1| pre-mRNA-splicing factor clf-1, putative [Pediculus humanus
corporis]
gi|212509867|gb|EEB13153.1| pre-mRNA-splicing factor clf-1, putative [Pediculus humanus
corporis]
Length = 1022
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+SFL+ + CYGYWRK + + EVF++ +++ S D+W HY N
Sbjct: 394 REAYDSFLSYYPYCYGYWRKYADYEKRKSTNEKCEEVFDRGLKAIPLSVDLWIHYLNYCK 453
Query: 58 EVPPDGHRKSEYQEEK 73
V + Q E+
Sbjct: 454 TVYAENEEHLRAQFER 469
>gi|156361086|ref|XP_001625351.1| predicted protein [Nematostella vectensis]
gi|156212181|gb|EDO33251.1| predicted protein [Nematostella vectensis]
Length = 502
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R + +F + CYGYW+K + EVFEQ +++ S D+W HY N +S
Sbjct: 33 RKAFQTFFKRYPYCYGYWKKYADMERKNGNIEAAKEVFEQGVKAIACSVDLWVHYLNFSS 92
Query: 58 EVP---PDG 63
+ PDG
Sbjct: 93 QATKGQPDG 101
>gi|121707303|ref|XP_001271793.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
gi|119399941|gb|EAW10367.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
Length = 590
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAAEMVYERGIASISSSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|384253115|gb|EIE26590.1| hypothetical protein COCSUDRAFT_59113 [Coccomyxa subellipsoidea
C-169]
Length = 755
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCA-----LLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY++F A++ LC+GYW+K A + V+E+ + + YS D+W HY +
Sbjct: 53 LREVYDAFFAEYPLCFGYWKKFADAENRHGSPEAALGVYERGVAAIPYSVDLWGHYASFK 112
Query: 57 SEV 59
+
Sbjct: 113 QTI 115
>gi|332026793|gb|EGI66902.1| Pre-mRNA-processing factor 39 [Acromyrmex echinatior]
Length = 1065
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 469 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQTVFDQGLKAISLSVDLWLHYINHCK 528
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 529 TVYEKDEEKLREQYER 544
>gi|348514496|ref|XP_003444776.1| PREDICTED: pre-mRNA-processing factor 39-like [Oreochromis
niloticus]
Length = 723
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R +FL + LCYGYW+K L + EV Q +Q+ S D+W HY NL
Sbjct: 108 RRALEAFLVRYPLCYGYWKKFADLERRVGLNDKAEEVCIQGLQAIPLSVDLWIHYINL 165
>gi|350421164|ref|XP_003492756.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 1 [Bombus
impatiens]
Length = 1040
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 442 REAYAKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFDQGLKAISLSVDLWLHYINHCK 501
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 502 TVYEKDEEKLREQYER 517
>gi|322801478|gb|EFZ22139.1| hypothetical protein SINV_09870 [Solenopsis invicta]
Length = 1039
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 443 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQTVFDQGLKAISLSVDLWLHYINHCK 502
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 503 TVYEKDEEKLREQYER 518
>gi|350421168|ref|XP_003492757.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 2 [Bombus
impatiens]
Length = 1029
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 431 REAYAKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFDQGLKAISLSVDLWLHYINHCK 490
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 491 TVYEKDEEKLREQYER 506
>gi|242010267|ref|XP_002425890.1| pre-mRNA-splicing factor clf-1, putative [Pediculus humanus
corporis]
gi|212509866|gb|EEB13152.1| pre-mRNA-splicing factor clf-1, putative [Pediculus humanus
corporis]
Length = 896
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+SFL+ + CYGYWRK + + EVF++ +++ S D+W HY N
Sbjct: 268 REAYDSFLSYYPYCYGYWRKYADYEKRKSTNEKCEEVFDRGLKAIPLSVDLWIHYLNYCK 327
Query: 58 EVPPDGHRKSEYQEEK 73
V + Q E+
Sbjct: 328 TVYAENEEHLRAQFER 343
>gi|307175777|gb|EFN65612.1| Pre-mRNA-processing factor 39 [Camponotus floridanus]
Length = 1028
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 431 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQMVFDQGLKAISLSVDLWLHYINHCK 490
Query: 58 EVPPDGHRKSEYQEEK 73
V K Q E+
Sbjct: 491 TVYEKDEEKLREQYER 506
>gi|307200027|gb|EFN80373.1| Pre-mRNA-processing factor 39 [Harpegnathos saltator]
Length = 966
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR-----VVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y FL + CYGYWRK + V VF+Q +++ + S D+W HY N
Sbjct: 369 REAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQTVFDQGLKAISLSVDLWLHYINHCK 428
Query: 58 EVPPDGHRKSEYQEEK 73
+ K Q E+
Sbjct: 429 TIYEKDEEKLREQYER 444
>gi|326474136|gb|EGD98145.1| mRNA splicing protein [Trichophyton tonsurans CBS 112818]
Length = 574
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RTVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCTFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|327296175|ref|XP_003232782.1| mRNA splicing protein [Trichophyton rubrum CBS 118892]
gi|326465093|gb|EGD90546.1| mRNA splicing protein [Trichophyton rubrum CBS 118892]
Length = 574
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RTVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCTFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|315051556|ref|XP_003175152.1| pre-mRNA-processing factor 39 [Arthroderma gypseum CBS 118893]
gi|311340467|gb|EFQ99669.1| pre-mRNA-processing factor 39 [Arthroderma gypseum CBS 118893]
Length = 573
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RTVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCTFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|326477557|gb|EGE01567.1| pre-mRNA-processing factor 39 [Trichophyton equinum CBS 127.97]
Length = 574
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RTVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCTFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|296426054|ref|XP_002842551.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638823|emb|CAZ80286.1| unnamed protein product [Tuber melanosporum]
Length = 531
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R V++ FLA F L +GYW+K T E V+E+ + S T S D+W +YCN
Sbjct: 65 RGVFDRFLARFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCNFKV 124
Query: 58 EVPPD 62
E D
Sbjct: 125 ETSHD 129
>gi|357608294|gb|EHJ65917.1| putative PRP39 pre-mRNA processing factor 39-like protein [Danaus
plexippus]
Length = 966
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCN 54
R Y++FL+ + CYGYWRK + +EV E+ +++ S D+W HY N
Sbjct: 396 REAYDAFLSHYPYCYGYWRKYADYEKRKGSKKKCLEVLERGLKAIPLSVDLWIHYLN 452
>gi|296810770|ref|XP_002845723.1| pre-mRNA-processing factor 39 [Arthroderma otae CBS 113480]
gi|238843111|gb|EEQ32773.1| pre-mRNA-processing factor 39 [Arthroderma otae CBS 113480]
Length = 590
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RTVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCTFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|300123235|emb|CBK24508.2| unnamed protein product [Blastocystis hominis]
Length = 634
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----------CALLTRVVEVFEQSMQSATYSSDVWF 50
+R Y FL F LCYGYW+K C + RV ++ +++ +A Y D+W
Sbjct: 49 MRKYYEQFLGRFPLCYGYWKKYCDQEIKRGSLKKQETIDRVNSIWSRAVAAAPYCVDMWI 108
Query: 51 HYCNLAS 57
+Y + AS
Sbjct: 109 YYMSFAS 115
>gi|115920183|ref|XP_793456.2| PREDICTED: pre-mRNA-processing factor 39-like [Strongylocentrotus
purpuratus]
Length = 813
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCA-----LLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++F + CYGYW+K + + R EVFE+ ++ S+D+W HY ++
Sbjct: 204 REAFDAFFKCYPYCYGYWKKYADSERKKGTIERCWEVFERGLKGIPLSADLWLHYISVTG 263
Query: 58 EVPPDGHRKSEYQEEK 73
+ P R + + EK
Sbjct: 264 QQIP---RSDDTRTEK 276
>gi|115397803|ref|XP_001214493.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192684|gb|EAU34384.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGIASISPSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|358366223|dbj|GAA82844.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 1430
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K T + V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISPSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|400595207|gb|EJP63014.1| pre-mRNA-processing factor 39 [Beauveria bassiana ARSEF 2860]
Length = 590
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----------ACCALLTRVVEVFEQSMQSATYSSDVWFH 51
R Y+ FL F L +GYW+K +LT V +V+E+ S T S D+W
Sbjct: 61 RDAYDRFLFKFPLLFGYWKKYADLEFNIAGPESAQMLTGVPQVYEKGCASITSSVDLWTD 120
Query: 52 YCNLASEVPPDGH 64
YC+ E + H
Sbjct: 121 YCSFTMETTHNPH 133
>gi|330790549|ref|XP_003283359.1| hypothetical protein DICPUDRAFT_25624 [Dictyostelium purpureum]
gi|325086784|gb|EGC40169.1| hypothetical protein DICPUDRAFT_25624 [Dictyostelium purpureum]
Length = 603
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALLT-----RVVEVFEQSMQSATYSSDVWFHY 52
IR VY+ FL +F LC+ YW++ + ++VFE+++++ ++S D+W +Y
Sbjct: 26 IRKVYSEFLNEFPLCFLYWKRYADHEYAHNNAPKAIQVFEEAVKAVSHSVDIWLNY 81
>gi|339235083|ref|XP_003379096.1| conserved hypothetical protein [Trichinella spiralis]
gi|316978279|gb|EFV61286.1| conserved hypothetical protein [Trichinella spiralis]
Length = 707
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALLT-----RVVEVFEQSMQSATYSSDVWFHYCNL 55
+RL +++FLA + LC+GYW K C L + ++V+E+ + S D+W Y +
Sbjct: 161 VRLSFDTFLARYPLCFGYWTKYACLELKNHNEEKCIQVYERGVSVIPLSVDLWMSYIDF 219
>gi|195390642|ref|XP_002053977.1| GJ23047 [Drosophila virilis]
gi|194152063|gb|EDW67497.1| GJ23047 [Drosophila virilis]
Length = 1092
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 434 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 488
>gi|440634734|gb|ELR04653.1| hypothetical protein GMDG_06935 [Geomyces destructans 20631-21]
Length = 587
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FL F L +GYW+K A L E VFE+ + T S D+W YC+
Sbjct: 59 VRDVYDRFLLKFPLLFGYWKKYADLEFLIAGTEAAEMVFERGVAGITNSVDLWTDYCSFK 118
Query: 57 SEVP--PDGHRK 66
E PD R+
Sbjct: 119 VETSHVPDVTRE 130
>gi|317038594|ref|XP_001401757.2| pre-mRNA-processing factor 39 [Aspergillus niger CBS 513.88]
gi|350632266|gb|EHA20634.1| hypothetical protein ASPNIDRAFT_50449 [Aspergillus niger ATCC 1015]
Length = 585
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISPSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|169773371|ref|XP_001821154.1| pre-mRNA-processing factor 39 [Aspergillus oryzae RIB40]
gi|83769015|dbj|BAE59152.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866075|gb|EIT75353.1| mRNA processing protein [Aspergillus oryzae 3.042]
Length = 590
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISPSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|238491356|ref|XP_002376915.1| mRNA splicing protein (Prp39), putative [Aspergillus flavus
NRRL3357]
gi|220697328|gb|EED53669.1| mRNA splicing protein (Prp39), putative [Aspergillus flavus
NRRL3357]
Length = 590
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISPSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|255942829|ref|XP_002562183.1| Pc18g03450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586916|emb|CAP94569.1| Pc18g03450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 584
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC+ +
Sbjct: 60 RAAYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEIVYERGIASVSPSVDIWTNYCSFKA 119
Query: 58 EVPPDGH 64
+ + H
Sbjct: 120 DTTHEAH 126
>gi|134058671|emb|CAK38655.1| unnamed protein product [Aspergillus niger]
Length = 591
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISPSVDLWTNYCSFK 118
Query: 57 SEVPPDG 63
+E D
Sbjct: 119 AETSHDA 125
>gi|195445878|ref|XP_002070524.1| GK12105 [Drosophila willistoni]
gi|194166609|gb|EDW81510.1| GK12105 [Drosophila willistoni]
Length = 1080
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ ++S S D+W HY
Sbjct: 393 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLESIPLSVDLWIHY 447
>gi|70994154|ref|XP_751924.1| mRNA splicing protein (Prp39) [Aspergillus fumigatus Af293]
gi|66849558|gb|EAL89886.1| mRNA splicing protein (Prp39), putative [Aspergillus fumigatus
Af293]
gi|159125161|gb|EDP50278.1| mRNA splicing protein (Prp39), putative [Aspergillus fumigatus
A1163]
Length = 591
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISSSVDLWTNYCSFK 118
Query: 57 SEVPPD 62
+E D
Sbjct: 119 AETSHD 124
>gi|67522356|ref|XP_659239.1| hypothetical protein AN1635.2 [Aspergillus nidulans FGSC A4]
gi|40745599|gb|EAA64755.1| hypothetical protein AN1635.2 [Aspergillus nidulans FGSC A4]
gi|259486971|tpe|CBF85265.1| TPA: mRNA splicing protein (Prp39), putative (AFU_orthologue;
AFUA_4G09010) [Aspergillus nidulans FGSC A4]
Length = 588
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISSSVDLWTNYCTFK 118
Query: 57 SEVPPD 62
+E D
Sbjct: 119 AETSHD 124
>gi|226291621|gb|EEH47049.1| pre-mRNA-processing factor 39 [Paracoccidioides brasiliensis Pb18]
Length = 541
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RSVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|295668366|ref|XP_002794732.1| pre-mRNA-processing factor 39 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286148|gb|EEH41714.1| pre-mRNA-processing factor 39 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 541
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RSVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|449671753|ref|XP_004207558.1| PREDICTED: pre-mRNA-processing factor 39-like, partial [Hydra
magnipapillata]
Length = 410
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R YN FL + CYGYW+K + E+FE+ +++ S D+W HY N
Sbjct: 12 RDAYNCFLRYYPYCYGYWKKFSDVEKKSGNYAQATEIFERGLKAIPISVDLWIHYINFTM 71
Query: 58 E 58
+
Sbjct: 72 Q 72
>gi|225679861|gb|EEH18145.1| pre-mRNA-processing factor 39 [Paracoccidioides brasiliensis Pb03]
Length = 593
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RSVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|425769164|gb|EKV07665.1| MRNA splicing protein (Prp39), putative [Penicillium digitatum Pd1]
gi|425770722|gb|EKV09186.1| MRNA splicing protein (Prp39), putative [Penicillium digitatum
PHI26]
Length = 589
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K T + ++E+ + S + S D+W +YC+
Sbjct: 59 VRSVYDRFLAKFPLLFGYWKKYADQEFSITGTEAADMIYERGIASISPSVDLWTNYCSFK 118
Query: 57 SEVPPD 62
+E D
Sbjct: 119 AETSHD 124
>gi|195158443|ref|XP_002020095.1| GL13803 [Drosophila persimilis]
gi|194116864|gb|EDW38907.1| GL13803 [Drosophila persimilis]
Length = 1072
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK L +VFE+ +++ S D+W HY
Sbjct: 396 REAYDTFLSHYPYCYGYWRKYADYEKRKGLKANCYKVFERGLEAIPLSVDLWIHY 450
>gi|321459347|gb|EFX70401.1| hypothetical protein DAPPUDRAFT_228312 [Daphnia pulex]
Length = 793
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCN 54
R Y+SFL + CYGYW+K A+ +VFE+ + + S D+W HY N
Sbjct: 210 REAYDSFLRRYPYCYGYWKKWADYEKKKAMKKDCEKVFERGLAAIPLSVDLWLHYLN 266
>gi|390177095|ref|XP_002137035.2| GA26805, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858904|gb|EDY67593.2| GA26805, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1109
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK L +VFE+ +++ S D+W HY
Sbjct: 435 REAYDTFLSHYPYCYGYWRKYADYEKRKGLKANCYKVFERGLEAIPLSVDLWIHY 489
>gi|119500730|ref|XP_001267122.1| hypothetical protein NFIA_107160 [Neosartorya fischeri NRRL 181]
gi|119415287|gb|EAW25225.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 591
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-ACCALLTRVVE----VFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FLA F L +GYW+K A E V+E+ + S + S D+W +YC+
Sbjct: 59 VRNVYDRFLAKFPLLFGYWKKYADLEFSITGTEAADMVYERGVASISSSVDLWTNYCSFK 118
Query: 57 SEVPPD 62
E D
Sbjct: 119 GETSHD 124
>gi|261204201|ref|XP_002629314.1| mRNA splicing protein [Ajellomyces dermatitidis SLH14081]
gi|239587099|gb|EEQ69742.1| mRNA splicing protein [Ajellomyces dermatitidis SLH14081]
gi|239614348|gb|EEQ91335.1| mRNA splicing protein [Ajellomyces dermatitidis ER-3]
gi|327356975|gb|EGE85832.1| MRNA processing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 591
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 60 RGVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASITNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|223647584|gb|ACN10550.1| Pre-mRNA-processing factor 39 [Salmo salar]
Length = 687
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 8 SFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
+FLA + LCYGYW+K + EV Q +++ S D+W HY NL
Sbjct: 80 AFLARYPLCYGYWKKFADLERRAGYTNKAQEVCVQGLKAIPLSVDLWIHYINL 132
>gi|392866895|gb|EJB11220.1| mRNA splicing protein [Coccidioides immitis RS]
Length = 604
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R +Y+ FLA F L +GYW+K A V+E+ + S T S D+W +YC
Sbjct: 60 RAIYDKFLAKFPLLFGYWKKYADLEFSIAGTESAEMVYERGVASITNSVDLWTNYCTF 117
>gi|303320767|ref|XP_003070378.1| hypothetical protein CPC735_061060 [Coccidioides posadasii C735
delta SOWgp]
gi|240110074|gb|EER28233.1| hypothetical protein CPC735_061060 [Coccidioides posadasii C735
delta SOWgp]
Length = 604
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R +Y+ FLA F L +GYW+K A V+E+ + S T S D+W +YC
Sbjct: 60 RAIYDKFLAKFPLLFGYWKKYADLEFSIAGTESAEMVYERGVASITNSVDLWTNYCTF 117
>gi|410913619|ref|XP_003970286.1| PREDICTED: pre-mRNA-processing factor 39-like [Takifugu rubripes]
Length = 703
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R SFL + LCYGYW+K R +V Q +Q S D+W HY NL
Sbjct: 102 RRALESFLVRYPLCYGYWKKFADIERRAGYNDRAEQVCVQGLQVIPLSVDLWIHYINL 159
>gi|346320935|gb|EGX90535.1| mRNA splicing protein (Prp39) [Cordyceps militaris CM01]
Length = 644
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R YN FL+ F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 61 RDAYNRFLSKFPLLFGYWKKYADLEFNIAGPESAQMVYEKGCASITNSVDLWTDYCSFTM 120
Query: 58 EVPPDGH 64
E D H
Sbjct: 121 ETTHDPH 127
>gi|195503487|ref|XP_002098673.1| GE23802 [Drosophila yakuba]
gi|194184774|gb|EDW98385.1| GE23802 [Drosophila yakuba]
Length = 1035
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 362 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 416
>gi|194745195|ref|XP_001955074.1| GF18589 [Drosophila ananassae]
gi|190628111|gb|EDV43635.1| GF18589 [Drosophila ananassae]
Length = 1019
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 351 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 405
>gi|449295151|gb|EMC91173.1| hypothetical protein BAUCODRAFT_317285 [Baudoinia compniacensis
UAMH 10762]
Length = 574
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC +
Sbjct: 56 RDVYDRFLAHFPLFFGYWKKYADIEFSIAGTEAAEMVYERGIASISTSVDLWANYCGFKA 115
Query: 58 EVPPD 62
E D
Sbjct: 116 ETNHD 120
>gi|45551993|ref|NP_733256.2| CG1646, isoform B [Drosophila melanogaster]
gi|74876527|sp|Q7KRW8.1|PRP39_DROME RecName: Full=Pre-mRNA-processing factor 39; AltName: Full=PRP39
homolog
gi|45446691|gb|AAN14302.2| CG1646, isoform B [Drosophila melanogaster]
Length = 1066
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 399 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 453
>gi|21357975|ref|NP_651634.1| CG1646, isoform A [Drosophila melanogaster]
gi|28571914|ref|NP_788753.1| CG1646, isoform C [Drosophila melanogaster]
gi|161078719|ref|NP_001097957.1| CG1646, isoform E [Drosophila melanogaster]
gi|7301703|gb|AAF56816.1| CG1646, isoform A [Drosophila melanogaster]
gi|15291785|gb|AAK93161.1| LD26426p [Drosophila melanogaster]
gi|28381484|gb|AAO41607.1| CG1646, isoform C [Drosophila melanogaster]
gi|158030427|gb|ABW08793.1| CG1646, isoform E [Drosophila melanogaster]
gi|220947196|gb|ACL86141.1| CG1646-PA [synthetic construct]
Length = 1009
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 342 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 396
>gi|195054118|ref|XP_001993973.1| GH22424 [Drosophila grimshawi]
gi|193895843|gb|EDV94709.1| GH22424 [Drosophila grimshawi]
Length = 1077
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 411 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 465
>gi|194906795|ref|XP_001981431.1| GG11615 [Drosophila erecta]
gi|190656069|gb|EDV53301.1| GG11615 [Drosophila erecta]
Length = 1019
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 358 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 412
>gi|345567395|gb|EGX50327.1| hypothetical protein AOL_s00076g91 [Arthrobotrys oligospora ATCC
24927]
Length = 612
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNL 55
M R ++ FLA F L +GYW+K T E V+E+ + S T S D+W YCN
Sbjct: 64 MTRSAFDRFLAKFPLLFGYWKKYADLEFSIAGTEASEMVYERGVASITNSVDLWTAYCNF 123
Query: 56 ASEVPPD 62
+ D
Sbjct: 124 KVDTSHD 130
>gi|195341030|ref|XP_002037115.1| GM12738 [Drosophila sechellia]
gi|194131231|gb|EDW53274.1| GM12738 [Drosophila sechellia]
Length = 1028
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 359 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 413
>gi|195112804|ref|XP_002000962.1| GI22241 [Drosophila mojavensis]
gi|193917556|gb|EDW16423.1| GI22241 [Drosophila mojavensis]
Length = 1084
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R Y++FL+ + CYGYWRK + +VFE+ +++ S D+W HY
Sbjct: 422 REAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFERGLEAIPLSVDLWIHY 476
>gi|378725908|gb|EHY52367.1| hypothetical protein HMPREF1120_00581 [Exophiala dermatitidis
NIH/UT8656]
Length = 561
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
IR +Y+ LA F L +GYW+K T E V+E+ + S T S D+W +YC
Sbjct: 57 IRNIYDRLLAKFPLFFGYWKKYADMEFAIAGTEAAEMVYERGVASITNSVDLWTNYCAFK 116
Query: 57 SEVPPDG 63
SE D
Sbjct: 117 SETCHDA 123
>gi|154273625|ref|XP_001537664.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415272|gb|EDN10625.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 516
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC
Sbjct: 60 RGVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASISNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|325088149|gb|EGC41459.1| pre-mRNA-processing factor 39 [Ajellomyces capsulatus H88]
Length = 595
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC
Sbjct: 60 RGVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASISNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|225559089|gb|EEH07372.1| pre-mRNA-processing factor 39 [Ajellomyces capsulatus G186AR]
Length = 595
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R VY+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC
Sbjct: 60 RGVYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASISNSVDLWTNYCAFKV 119
Query: 58 EVPPDG 63
E D
Sbjct: 120 ETSHDA 125
>gi|301616170|ref|XP_002937548.1| PREDICTED: pre-mRNA-processing factor 39 [Xenopus (Silurana)
tropicalis]
Length = 659
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-ACCALLTR----VVEVFEQSMQSATYSSDVWFHYC 53
R VY++FL F CYGYW+K A L R EV+ +++QS S D+W +Y
Sbjct: 76 RKVYDAFLTRFPYCYGYWKKYADLELQLRNTAETEEVYCRALQSIPLSVDLWINYI 131
>gi|56788871|gb|AAH88586.1| prpf39 protein [Xenopus (Silurana) tropicalis]
Length = 656
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-ACCALLTR----VVEVFEQSMQSATYSSDVWFHYC 53
R VY++FL F CYGYW+K A L R EV+ +++QS S D+W +Y
Sbjct: 73 RKVYDAFLTRFPYCYGYWKKYADLELQLRNTAETEEVYCRALQSIPLSVDLWINYI 128
>gi|171846532|gb|AAI61797.1| prpf39 protein [Xenopus (Silurana) tropicalis]
Length = 658
Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-ACCALLTR----VVEVFEQSMQSATYSSDVWFHYC 53
R VY++FL F CYGYW+K A L R EV+ +++QS S D+W +Y
Sbjct: 75 RKVYDAFLTRFPYCYGYWKKYADLELQLRNTAETEEVYCRALQSIPLSVDLWINYI 130
>gi|405952227|gb|EKC20064.1| Pre-mRNA-processing factor 39 [Crassostrea gigas]
Length = 637
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y++F + CYGYW+K + + +EVFE+ ++ + S ++W HY +
Sbjct: 71 RKAYDAFFEHYPYCYGYWKKYADMEKKQSGAEKALEVFERGTKAISLSVELWLHYITFYT 130
Query: 58 E 58
E
Sbjct: 131 E 131
>gi|443715863|gb|ELU07632.1| hypothetical protein CAPTEDRAFT_180947 [Capitella teleta]
Length = 624
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYC 53
R +++FL F CYGYW+K +RV EV E + + S D+W HY
Sbjct: 59 RAAFDAFLERFPYCYGYWKKYSDMEKKSDDPSRVEEVLEAGVMAIPLSIDLWVHYI 114
>gi|258577623|ref|XP_002542993.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903259|gb|EEP77660.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 604
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R +Y+ FLA F L +GYW+K T E V+E+ + S + S D+W +YC
Sbjct: 60 REIYDKFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASISNSVDLWTNYCTFKV 119
Query: 58 EVPPD 62
+ D
Sbjct: 120 DTTHD 124
>gi|156546892|ref|NP_808474.2| pre-mRNA-processing factor 39 [Mus musculus]
Length = 665
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 EVPPDGHRKS 67
E G +++
Sbjct: 173 ETLDPGDQET 182
>gi|156058077|ref|XP_001594962.1| hypothetical protein SS1G_04770 [Sclerotinia sclerotiorum 1980]
gi|154702555|gb|EDO02294.1| hypothetical protein SS1G_04770 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 592
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K T E VFE+ + S S D+W YC+
Sbjct: 60 RDSYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVFERGIASIATSVDLWTDYCSFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|154298997|ref|XP_001549919.1| hypothetical protein BC1G_11811 [Botryotinia fuckeliana B05.10]
Length = 591
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K T E VFE+ + S S D+W YC+
Sbjct: 60 RDSYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVFERGIASIATSVDLWTDYCSFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|223590246|sp|Q8K2Z2.3|PRP39_MOUSE RecName: Full=Pre-mRNA-processing factor 39; AltName: Full=PRP39
homolog
Length = 665
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 EVPPDGHRKS 67
E G +++
Sbjct: 173 ETLEPGDQET 182
>gi|291242877|ref|XP_002741361.1| PREDICTED: CG1646-like [Saccoglossus kowalevskii]
Length = 647
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R +++F + CYGYW+K L R E F++ ++ S D+W HY N
Sbjct: 166 REAFSAFFDRYPYCYGYWKKLADLEKKHGNLDRACEAFDRGTRAIALSVDLWIHYINF 223
>gi|169601266|ref|XP_001794055.1| hypothetical protein SNOG_03493 [Phaeosphaeria nodorum SN15]
gi|111067578|gb|EAT88698.1| hypothetical protein SNOG_03493 [Phaeosphaeria nodorum SN15]
Length = 569
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNL 55
++R VY+ FLA F L +GYW+K T E V+E+ + T S D+W +YC
Sbjct: 65 LVRNVYDCFLAKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCVTTSVDLWANYCTF 124
Query: 56 ASEVPPD 62
+ D
Sbjct: 125 KMDTSHD 131
>gi|334310781|ref|XP_001368787.2| PREDICTED: pre-mRNA-processing factor 39 isoform 1 [Monodelphis
domestica]
Length = 668
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 114 RKAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 173
Query: 58 E-VPPD 62
E + PD
Sbjct: 174 ETLDPD 179
>gi|170594535|ref|XP_001902019.1| PRPF39 protein [Brugia malayi]
gi|158590963|gb|EDP29578.1| PRPF39 protein, putative [Brugia malayi]
Length = 489
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ F + CYGYWRK R EV+E+ + + S D+W HY
Sbjct: 97 REAYDDFFKRYPYCYGYWRKYAEFERRHKHYDRCTEVYERGVTAIPLSVDLWLHYIAFIK 156
Query: 58 EV 59
E+
Sbjct: 157 EI 158
>gi|402593785|gb|EJW87712.1| hypothetical protein WUBG_01382 [Wuchereria bancrofti]
Length = 491
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ F + CYGYWRK R EV+E+ + + S D+W HY
Sbjct: 99 REAYDDFFKRYPYCYGYWRKYAEFERRHKHYDRCTEVYERGVTAIPLSVDLWLHYIAFIK 158
Query: 58 EV 59
E+
Sbjct: 159 EI 160
>gi|326921329|ref|XP_003206913.1| PREDICTED: pre-mRNA-processing factor 39-like [Meleagris gallopavo]
Length = 680
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCN-LA 56
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N L
Sbjct: 127 RKAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 186
Query: 57 SEVPPD 62
+ PD
Sbjct: 187 DTLDPD 192
>gi|407921818|gb|EKG14956.1| RNA-processing protein HAT helix [Macrophomina phaseolina MS6]
Length = 568
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R +Y+ FLA F L +GYW+K T E V+E+ + S S D+W +YC
Sbjct: 59 RAIYDRFLARFPLFFGYWKKYADLEFSIAGTEAAEMVYERGVASIASSVDLWANYCGFKV 118
Query: 58 EVPPD 62
E D
Sbjct: 119 ETNHD 123
>gi|363734910|ref|XP_003641480.1| PREDICTED: pre-mRNA-processing factor 39 [Gallus gallus]
Length = 680
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCN-LA 56
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N L
Sbjct: 127 RKAFDKFFTHYPYCYGYWKKYADLERRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 186
Query: 57 SEVPPD 62
+ PD
Sbjct: 187 DTLDPD 192
>gi|328696652|ref|XP_001951289.2| PREDICTED: pre-mRNA-processing factor 39-like [Acyrthosiphon pisum]
Length = 770
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y++FL + CYGYWRK +VF++ +++ S D+W HY
Sbjct: 262 REAYDAFLDLYPYCYGYWRKYADYERKNGTKENCEKVFDRGLKAIPLSVDLWIHYMGYMK 321
Query: 58 EVPPDGHRKSEYQEEK 73
PD Q E+
Sbjct: 322 SAYPDDEDMIREQFER 337
>gi|393912543|gb|EJD76781.1| pre-mRNA-processing factor 39 [Loa loa]
Length = 720
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ F + CYGYWRK R EV+E+ + + S D+W HY
Sbjct: 99 REAYDDFFKRYPYCYGYWRKYAEFERRHKHYDRCSEVYERGVTAIPLSVDLWLHYIAFVK 158
Query: 58 EV 59
E+
Sbjct: 159 EI 160
>gi|417403750|gb|JAA48672.1| Putative mrna processing protein [Desmodus rotundus]
Length = 668
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 EV--PPDGHRKS 67
E P D S
Sbjct: 173 ETLDPGDSETNS 184
>gi|395838648|ref|XP_003792224.1| PREDICTED: pre-mRNA-processing factor 39 [Otolemur garnettii]
Length = 669
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EV--PPDGHRKS 67
E P D S
Sbjct: 175 ETLDPSDPETNS 186
>gi|149410459|ref|XP_001514648.1| PREDICTED: pre-mRNA-processing factor 39 [Ornithorhynchus anatinus]
Length = 669
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLEPG 180
>gi|327280416|ref|XP_003224948.1| PREDICTED: pre-mRNA-processing factor 39-like [Anolis carolinensis]
Length = 605
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 118 RKAFDRFFVHYPYCYGYWKKYADMEKRHGNMKQSDEVYRRGLQAIPLSIDLWIHYINFLK 177
Query: 58 EV 59
E
Sbjct: 178 ET 179
>gi|291403796|ref|XP_002718211.1| PREDICTED: PRP39 pre-mRNA processing factor 39 homolog [Oryctolagus
cuniculus]
Length = 669
Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|312065087|ref|XP_003135619.1| PRPF39 protein [Loa loa]
Length = 526
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ F + CYGYWRK R EV+E+ + + S D+W HY
Sbjct: 138 REAYDDFFKRYPYCYGYWRKYAEFERRHKHYDRCSEVYERGVTAIPLSVDLWLHYIAFVK 197
Query: 58 EV 59
E+
Sbjct: 198 EI 199
>gi|242801269|ref|XP_002483727.1| mRNA splicing protein (Prp39), putative [Talaromyces stipitatus
ATCC 10500]
gi|218717072|gb|EED16493.1| mRNA splicing protein (Prp39), putative [Talaromyces stipitatus
ATCC 10500]
Length = 590
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FLA F L +GYW+K T E V+E+ + S S D+W +YC
Sbjct: 59 VRNAYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASIPTSVDLWANYCAFK 118
Query: 57 SEVPPD 62
E D
Sbjct: 119 VETNHD 124
>gi|392341022|ref|XP_003754228.1| PREDICTED: uncharacterized protein LOC314171 [Rattus norvegicus]
gi|392348856|ref|XP_003750219.1| PREDICTED: uncharacterized protein LOC314171 [Rattus norvegicus]
Length = 664
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 112 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 171
Query: 58 EVPPDG 63
E G
Sbjct: 172 ETLDPG 177
>gi|296214898|ref|XP_002753900.1| PREDICTED: pre-mRNA-processing factor 39 [Callithrix jacchus]
Length = 669
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|354500465|ref|XP_003512320.1| PREDICTED: pre-mRNA-processing factor 39 [Cricetulus griseus]
Length = 664
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 112 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 171
Query: 58 EVPPDG 63
E G
Sbjct: 172 ETLDPG 177
>gi|406864197|gb|EKD17243.1| pre-mRNA-processing factor 39 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 592
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K T E V+E+ + S S D+W YC+
Sbjct: 54 RSAYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASIATSVDLWTDYCSFKV 113
Query: 58 EVPPD 62
E D
Sbjct: 114 ETSHD 118
>gi|213401169|ref|XP_002171357.1| pre-mRNA-processing factor 39 [Schizosaccharomyces japonicus
yFS275]
gi|211999404|gb|EEB05064.1| pre-mRNA-processing factor 39 [Schizosaccharomyces japonicus
yFS275]
Length = 622
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FL F L +GYW+K A + V+E+ + S D+W +YC
Sbjct: 57 LRGVYDRFLTKFPLLFGYWKKYADLEFYVAGVEAAERVYERGIAGIPCSVDLWANYCAFK 116
Query: 57 SEVPPDGHRKSEYQE 71
E H+ E +E
Sbjct: 117 MET---SHKSEEIRE 128
>gi|444705579|gb|ELW46988.1| Pre-mRNA-processing factor 39 [Tupaia chinensis]
Length = 577
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EV 59
E
Sbjct: 175 ET 176
>gi|194207328|ref|XP_001493495.2| PREDICTED: pre-mRNA-processing factor 39 isoform 2 [Equus caballus]
Length = 667
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 EVPPDG 63
E G
Sbjct: 173 ETLDPG 178
>gi|403278048|ref|XP_003930642.1| PREDICTED: pre-mRNA-processing factor 39 [Saimiri boliviensis
boliviensis]
Length = 630
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 76 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 135
Query: 58 EVPPDG 63
E G
Sbjct: 136 ETLDPG 141
>gi|395504001|ref|XP_003756349.1| PREDICTED: pre-mRNA-processing factor 39 [Sarcophilus harrisii]
Length = 668
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 114 RRAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 173
Query: 58 E-VPPD 62
E + PD
Sbjct: 174 ETLDPD 179
>gi|396458220|ref|XP_003833723.1| hypothetical protein LEMA_P064840.1 [Leptosphaeria maculans JN3]
gi|312210271|emb|CBX90358.1| hypothetical protein LEMA_P064840.1 [Leptosphaeria maculans JN3]
Length = 1069
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNL 55
++R VY+ FL F L +GYW+K T E V+E+ + + S D+W +YC
Sbjct: 548 LVRNVYDCFLTKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCVSPSVDLWANYCTF 607
Query: 56 ASEVPPD 62
+ D
Sbjct: 608 KMDTSHD 614
>gi|342890405|gb|EGU89223.1| hypothetical protein FOXB_00176 [Fusarium oxysporum Fo5176]
Length = 587
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 RDAYDRFLIKFPLLFGYWKKYADMEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFKM 119
Query: 58 EVPPDGH 64
E D H
Sbjct: 120 ETTHDPH 126
>gi|212540620|ref|XP_002150465.1| mRNA splicing protein (Prp39), putative [Talaromyces marneffei ATCC
18224]
gi|210067764|gb|EEA21856.1| mRNA splicing protein (Prp39), putative [Talaromyces marneffei ATCC
18224]
Length = 587
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FLA F L +GYW+K T E V+E+ + S S D+W +YC
Sbjct: 59 VRNSYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVYERGVASIPTSVDLWTNYCAFK 118
Query: 57 SEVPPD 62
E D
Sbjct: 119 VETNHD 124
>gi|19113218|ref|NP_596426.1| U1 snRNP-associated protein Usp105 [Schizosaccharomyces pombe
972h-]
gi|74626935|sp|O74970.1|PRP39_SCHPO RecName: Full=Pre-mRNA-processing factor 39
gi|3169096|emb|CAA19289.1| U1 snRNP-associated protein Usp105 [Schizosaccharomyces pombe]
Length = 612
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R VY+ FL + L +GYW+K A ++E+ + +S D+W +YC
Sbjct: 57 LRSVYDRFLGKYPLLFGYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFK 116
Query: 57 SEVPPDGHRKSE 68
E D + E
Sbjct: 117 METNGDANEVRE 128
>gi|189193715|ref|XP_001933196.1| pre-mRNA-processing factor 39 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978760|gb|EDU45386.1| pre-mRNA-processing factor 39 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 564
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNL 55
++R VY+ FL F L +GYW+K T E V+E+ + T S D+W +YC
Sbjct: 65 LVRNVYDCFLTKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCVTTSVDLWANYCTF 124
Query: 56 ASEVPPD 62
+ D
Sbjct: 125 KMDTSHD 131
>gi|302922149|ref|XP_003053406.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734347|gb|EEU47693.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 532
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 61 RDAYDRFLLKFPLLFGYWKKYADMEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFKM 120
Query: 58 EVPPDGH 64
E D H
Sbjct: 121 ETTHDPH 127
>gi|347840301|emb|CCD54873.1| similar to pre-mRNA-processing factor 39 [Botryotinia fuckeliana]
Length = 591
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K T E VFE+ + S S D+W YC+
Sbjct: 60 RDSYDRFLAKFPLLFGYWKKYADLEFSIAGTEAAEMVFERGIASIATSVDLWTDYCSFKV 119
Query: 58 EVPPD 62
E D
Sbjct: 120 ETSHD 124
>gi|430812362|emb|CCJ30227.1| unnamed protein product [Pneumocystis jirovecii]
Length = 615
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC----CALLTRVVE-VFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYWRK T E V+E+ + + S D+W +YC
Sbjct: 60 MRNAYDRFLTKFPLLFGYWRKYAELEFSIAGTEAAEIVYERGVAGISNSVDLWTNYCGFK 119
Query: 57 SEVPPDGHRKSEYQE 71
E D E E
Sbjct: 120 METSHDAEETRELFE 134
>gi|449504633|ref|XP_004174615.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
[Taeniopygia guttata]
Length = 627
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 117 RKAFDRFFSHYPYCYGYWKKYADLERRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 176
Query: 58 EV--PPDGHRKS 67
+ P D S
Sbjct: 177 DTLDPADPETNS 188
>gi|451998561|gb|EMD91025.1| hypothetical protein COCHEDRAFT_1156369 [Cochliobolus
heterostrophus C5]
Length = 567
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNL 55
++R VY+ FL F L +GYW+K T E V+E+ + T S D+W +YC+
Sbjct: 65 LVRNVYDCFLTKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCITTSVDLWANYCSF 124
Query: 56 ASEVPPDG 63
+ D
Sbjct: 125 KMDTSHDN 132
>gi|451848743|gb|EMD62048.1| hypothetical protein COCSADRAFT_95189 [Cochliobolus sativus ND90Pr]
Length = 564
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNL 55
++R VY+ FL F L +GYW+K T E V+E+ + T S D+W +YC+
Sbjct: 65 LVRNVYDCFLTKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCITTSVDLWANYCSF 124
Query: 56 ASEVPPDG 63
+ D
Sbjct: 125 KMDTSHDN 132
>gi|344253071|gb|EGW09175.1| Pre-mRNA-processing factor 39 [Cricetulus griseus]
Length = 417
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 112 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 171
Query: 58 E 58
E
Sbjct: 172 E 172
>gi|330934364|ref|XP_003304517.1| hypothetical protein PTT_17143 [Pyrenophora teres f. teres 0-1]
gi|311318824|gb|EFQ87398.1| hypothetical protein PTT_17143 [Pyrenophora teres f. teres 0-1]
Length = 564
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNL 55
++R VY+ FL F L +GYW+K T E V+E+ + T S D+W +YC
Sbjct: 65 LVRNVYDCFLTKFPLFFGYWKKYADLEFSIGGTETAEMVYERGVSCVTPSVDLWANYCTF 124
Query: 56 ASEVPPD 62
+ D
Sbjct: 125 KMDTSHD 131
>gi|241825602|ref|XP_002416613.1| conserved hypothetical protein [Ixodes scapularis]
gi|215511077|gb|EEC20530.1| conserved hypothetical protein [Ixodes scapularis]
Length = 442
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC------CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + CYGYW+K C+ + + E FE+ + + S D+W HY N
Sbjct: 69 REAFDKFFTYYPYCYGYWKKYADMEKKHCS-IEKAEETFERGVAAIPLSVDLWIHYINF 126
>gi|351710098|gb|EHB13017.1| Pre-mRNA-processing factor 39 [Heterocephalus glaber]
Length = 670
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 E 58
E
Sbjct: 175 E 175
>gi|453082019|gb|EMF10067.1| hypothetical protein SEPMUDRAFT_151123 [Mycosphaerella populorum
SO2202]
Length = 551
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K A V+E+ + S S D+W +YC
Sbjct: 56 RDTYDRFLARFPLFFGYWKKYADLEFAIAGTESAEMVYERGVASVGLSVDLWANYCAFKV 115
Query: 58 EVPPDG 63
E D
Sbjct: 116 ETSHDA 121
>gi|301786803|ref|XP_002928814.1| PREDICTED: pre-mRNA-processing factor 39-like isoform 1 [Ailuropoda
melanoleuca]
gi|281341287|gb|EFB16871.1| hypothetical protein PANDA_018870 [Ailuropoda melanoleuca]
Length = 667
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 EVPPDG 63
E G
Sbjct: 173 ETVDPG 178
>gi|348686485|gb|EGZ26300.1| hypothetical protein PHYSODRAFT_555864 [Phytophthora sojae]
Length = 792
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 21/73 (28%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC---CALLTRVVE------------------VFEQSMQ 40
+ Y+ FLA+F LC+GYW K L ++ E V+E+ +
Sbjct: 224 VEATYDRFLAEFPLCFGYWNKYAQYEFGLANKLTEDGSGTVATPEEAKTKARGVYERGVV 283
Query: 41 SATYSSDVWFHYC 53
+ YS D+W YC
Sbjct: 284 AVKYSVDMWMKYC 296
>gi|410962303|ref|XP_003987712.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
[Felis catus]
Length = 620
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 E 58
E
Sbjct: 173 E 173
>gi|348572068|ref|XP_003471816.1| PREDICTED: pre-mRNA-processing factor 39-like [Cavia porcellus]
Length = 669
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 E 58
E
Sbjct: 175 E 175
>gi|194034405|ref|XP_001927155.1| PREDICTED: pre-mRNA-processing factor 39 [Sus scrofa]
Length = 666
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 E 58
E
Sbjct: 173 E 173
>gi|193586999|ref|XP_001951723.1| PREDICTED: pre-mRNA-processing factor 39-like [Acyrthosiphon pisum]
Length = 842
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHY 52
R YN FL + CYGYWRK EVF++ + + S D+W HY
Sbjct: 241 REAYNKFLELYPYCYGYWRKFADFEKRNNNKEECEEVFQRGLSAIPLSVDLWIHY 295
>gi|426376799|ref|XP_004055172.1| PREDICTED: pre-mRNA-processing factor 39 [Gorilla gorilla gorilla]
Length = 631
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|427784493|gb|JAA57698.1| Putative mrna processing protein [Rhipicephalus pulchellus]
Length = 672
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 72 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 129
>gi|440908631|gb|ELR58628.1| Pre-mRNA-processing factor 39 [Bos grunniens mutus]
Length = 667
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 E 58
E
Sbjct: 173 E 173
>gi|345804311|ref|XP_851059.2| PREDICTED: pre-mRNA-processing factor 39 isoform 2 [Canis lupus
familiaris]
Length = 667
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 E 58
E
Sbjct: 173 E 173
>gi|427783353|gb|JAA57128.1| Putative mrna processing protein [Rhipicephalus pulchellus]
Length = 706
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 106 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 163
>gi|156938331|ref|NP_060392.3| pre-mRNA-processing factor 39 [Homo sapiens]
gi|223590245|sp|Q86UA1.3|PRP39_HUMAN RecName: Full=Pre-mRNA-processing factor 39; AltName: Full=PRP39
homolog
Length = 669
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|297695016|ref|XP_002824755.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
[Pongo abelii]
Length = 669
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|402876045|ref|XP_003901794.1| PREDICTED: pre-mRNA-processing factor 39 [Papio anubis]
gi|355778550|gb|EHH63586.1| hypothetical protein EGM_16585 [Macaca fascicularis]
gi|380814160|gb|AFE78954.1| pre-mRNA-processing factor 39 [Macaca mulatta]
gi|383419537|gb|AFH32982.1| pre-mRNA-processing factor 39 [Macaca mulatta]
Length = 669
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|332842126|ref|XP_001151081.2| PREDICTED: pre-mRNA-processing factor 39 isoform 5 [Pan
troglodytes]
gi|397523577|ref|XP_003831804.1| PREDICTED: pre-mRNA-processing factor 39 [Pan paniscus]
gi|410212890|gb|JAA03664.1| PRP39 pre-mRNA processing factor 39 homolog [Pan troglodytes]
gi|410261228|gb|JAA18580.1| PRP39 pre-mRNA processing factor 39 homolog [Pan troglodytes]
gi|410292606|gb|JAA24903.1| PRP39 pre-mRNA processing factor 39 homolog [Pan troglodytes]
gi|410330899|gb|JAA34396.1| PRP39 pre-mRNA processing factor 39 homolog [Pan troglodytes]
Length = 669
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|427782723|gb|JAA56813.1| Putative mrna processing protein [Rhipicephalus pulchellus]
Length = 704
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 104 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 161
>gi|297297762|ref|XP_002808506.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like
[Macaca mulatta]
Length = 673
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|426248440|ref|XP_004017971.1| PREDICTED: pre-mRNA-processing factor 39 isoform 1 [Ovis aries]
Length = 667
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 E 58
E
Sbjct: 173 E 173
>gi|427779641|gb|JAA55272.1| Putative mrna processing protein [Rhipicephalus pulchellus]
Length = 538
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 72 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 129
>gi|441595439|ref|XP_003263794.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
[Nomascus leucogenys]
Length = 669
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY N
Sbjct: 115 RKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLK 174
Query: 58 EVPPDG 63
E G
Sbjct: 175 ETLDPG 180
>gi|398394249|ref|XP_003850583.1| hypothetical protein MYCGRDRAFT_73649 [Zymoseptoria tritici IPO323]
gi|339470462|gb|EGP85559.1| hypothetical protein MYCGRDRAFT_73649 [Zymoseptoria tritici IPO323]
Length = 560
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K A V+E+ + S S D+W +YC
Sbjct: 56 RDTYDRFLARFPLFFGYWKKYADLEFSIAGPEAAEMVYERGVASIGVSVDIWANYCAFKV 115
Query: 58 EVPPDG 63
E D
Sbjct: 116 ETSHDA 121
>gi|427798131|gb|JAA64517.1| Putative mrna processing protein, partial [Rhipicephalus
pulchellus]
Length = 544
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 120 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 177
>gi|427779683|gb|JAA55293.1| Putative mrna processing protein [Rhipicephalus pulchellus]
Length = 561
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 104 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 161
>gi|427782735|gb|JAA56819.1| Putative mrna processing protein [Rhipicephalus pulchellus]
Length = 541
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 3 RLVYNSFLADFHLCYGYWR------KACCALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
R ++ F + + CYGYW+ K C+ + + + FE+ + + S D+W HY N
Sbjct: 106 REAFDKFFSYYPYCYGYWKKFADMEKKLCS-IEKAEQTFERGVAAIPLSVDLWIHYINF 163
>gi|344273479|ref|XP_003408549.1| PREDICTED: pre-mRNA-processing factor 39 [Loxodonta africana]
Length = 667
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
+ ++ F + CYGYW+K + + EV+ + +Q+ S D+W HY N
Sbjct: 113 KKAFDKFFIHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLK 172
Query: 58 EVPPDG 63
E G
Sbjct: 173 ETLDPG 178
>gi|256087532|ref|XP_002579921.1| pre-mRNA processing protein prp39-related [Schistosoma mansoni]
gi|353230321|emb|CCD76492.1| pre-mRNA processing protein prp39-related [Schistosoma mansoni]
Length = 1016
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++F F CYGYW+K R ++V+E +++ S D+W Y + A+
Sbjct: 37 RQAFDAFFKRFPYCYGYWKKFADMERHKGNKERCLQVYEMGVKTIPLSVDLWTAYLDAAT 96
Query: 58 E 58
E
Sbjct: 97 E 97
>gi|452980104|gb|EME79865.1| hypothetical protein MYCFIDRAFT_189636 [Pseudocercospora fijiensis
CIRAD86]
Length = 580
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALL----TRVVE-VFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ FLA F L +GYW+K T E V+E+ + S S D+W +YC
Sbjct: 56 RDAYDRFLARFPLFFGYWKKYADLEFSIGGTEAAEMVYERGVASIGISVDLWANYCAFKV 115
Query: 58 EVPPDG 63
E D
Sbjct: 116 ETSHDA 121
>gi|290970688|ref|XP_002668218.1| predicted protein [Naegleria gruberi]
gi|284081490|gb|EFC35474.1| predicted protein [Naegleria gruberi]
Length = 337
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 13/68 (19%)
Query: 6 YNSFLADFHLCYGYWRKACCALLT--------RVVEVFEQSMQSAT---YSSDVWFHYCN 54
Y FL F L +GYW+K A LT + ++V+E+S+ T + D+W +YC
Sbjct: 64 YEKFLEQFPLLFGYWKKY--ATLTYQVTQSYEKTIQVYEKSVDKKTGIFNNPDLWANYCL 121
Query: 55 LASEVPPD 62
+E PD
Sbjct: 122 FVAEQSPD 129
>gi|432877667|ref|XP_004073210.1| PREDICTED: pre-mRNA-processing factor 39-like [Oryzias latipes]
Length = 708
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 7 NSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
+FL + LCYGYW+K + EV + +++ S D+W HY NL
Sbjct: 107 QAFLTHYPLCYGYWKKFVDLERRTGSNDKAEEVCIRGLRAIPLSVDLWIHYVNL 160
>gi|391340863|ref|XP_003744754.1| PREDICTED: pre-mRNA-processing factor 39-like [Metaseiulus
occidentalis]
Length = 602
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----------ALLTRVVEVFEQSMQSATYSSDVWFH 51
R V+ SF + CYGYW+K + + E FE+ +Q+ S D+W
Sbjct: 49 REVFLSFFEHYPYCYGYWKKLADLERKNVQEGEELAMEKCQETFEKGLQAIPLSVDLWLQ 108
Query: 52 YCNL 55
Y N
Sbjct: 109 YINF 112
>gi|115527979|gb|AAI25128.1| PRPF39 protein [Homo sapiens]
Length = 629
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR------VVEVFEQSMQSATYSSDVWFHYCNLA 56
R ++ F + CYGYW+K L R EV+ + +Q+ S D+W HY N
Sbjct: 75 RKAFDRFFIHYPYCYGYWKKYA-DLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFL 133
Query: 57 SE 58
E
Sbjct: 134 KE 135
>gi|115529045|gb|AAI25127.1| PRPF39 protein [Homo sapiens]
Length = 629
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 3 RLVYNSFLADFHLCYGYWRKACCALLTR------VVEVFEQSMQSATYSSDVWFHYCNLA 56
R ++ F + CYGYW+K L R EV+ + +Q+ S D+W HY N
Sbjct: 75 RKAFDRFFIHYPYCYGYWKKYA-DLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFL 133
Query: 57 SE 58
E
Sbjct: 134 KE 135
>gi|52218898|ref|NP_001004520.1| pre-mRNA-processing factor 39 [Danio rerio]
gi|118597487|sp|Q1JPZ7.2|PRP39_DANRE RecName: Full=Pre-mRNA-processing factor 39; AltName: Full=PRP39
homolog
gi|29561840|emb|CAD87784.1| novel protein similar to pre-mRNA processing proteins [Danio rerio]
Length = 752
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++F + CYGYW+K + EV+ + +Q+ S D+W HY
Sbjct: 186 RKAFDAFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHYITFLR 245
Query: 58 E 58
E
Sbjct: 246 E 246
>gi|223648148|gb|ACN10832.1| Pre-mRNA-processing factor 39 [Salmo salar]
Length = 462
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCN 54
++R +++F + CYGYW+K + EV+ + +Q+ S D+W HY +
Sbjct: 249 VVRKAFDAFFLHYPYCYGYWKKFADMEKKHGNVQVAEEVYRRGVQAIPLSVDLWLHYMS 307
>gi|350296357|gb|EGZ77334.1| hypothetical protein NEUTE2DRAFT_78721 [Neurospora tetrasperma FGSC
2509]
Length = 589
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K + V+E+ S T S D+W YC+
Sbjct: 60 LRATYDRFLLKFPLLFGYWKKYADLEFNISGPESAEMVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEVPPDGH 64
E H
Sbjct: 120 METTHTPH 127
>gi|336261104|ref|XP_003345343.1| hypothetical protein SMAC_04574 [Sordaria macrospora k-hell]
gi|380090594|emb|CCC11589.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 589
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K + V+E+ S T S D+W YC+
Sbjct: 60 LRATYDRFLLKFPLLFGYWKKYADLEFNISGPESAEMVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEVPPDGH 64
E H
Sbjct: 120 METTHTPH 127
>gi|389626539|ref|XP_003710923.1| pre-mRNA-processing factor 39 [Magnaporthe oryzae 70-15]
gi|351650452|gb|EHA58311.1| pre-mRNA-processing factor 39 [Magnaporthe oryzae 70-15]
gi|440463419|gb|ELQ32999.1| pre-mRNA-processing factor 39 [Magnaporthe oryzae Y34]
gi|440481335|gb|ELQ61934.1| pre-mRNA-processing factor 39 [Magnaporthe oryzae P131]
Length = 586
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCALLT-----RVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K T V+E+ S T S D+W YC+
Sbjct: 60 LRDAYDRFLLKFPLLFGYWKKYADLEFTIAGPESAEMVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEV 59
E
Sbjct: 120 MET 122
>gi|336464273|gb|EGO52513.1| hypothetical protein NEUTE1DRAFT_72208 [Neurospora tetrasperma FGSC
2508]
Length = 589
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K + V+E+ S T S D+W YC+
Sbjct: 60 LRATYDRFLLKFPLLFGYWKKYADLEFNISGPESAEMVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEVPPDGH 64
E H
Sbjct: 120 METTHTPH 127
>gi|94573493|gb|AAI16541.1| PRP39 pre-mRNA processing factor 39 homolog (yeast) [Danio rerio]
Length = 752
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++F + CYGYW+K + EV+ + +Q+ S D+W HY
Sbjct: 186 RKAFDAFFLHYPYCYGYWKKYADIERKHGYIRMADEVYRRGLQAIPLSVDLWLHYITFLR 245
Query: 58 E 58
E
Sbjct: 246 E 246
>gi|46108724|ref|XP_381420.1| hypothetical protein FG01244.1 [Gibberella zeae PH-1]
Length = 587
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ L F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 RDAYDRLLTKFPLFFGYWKKYADMEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFKM 119
Query: 58 EVPPDGH 64
E D H
Sbjct: 120 ETTHDPH 126
>gi|408392924|gb|EKJ72210.1| hypothetical protein FPSE_07606 [Fusarium pseudograminearum CS3096]
Length = 587
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 3 RLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R Y+ L F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 RDAYDRLLTKFPLFFGYWKKYADMEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFKM 119
Query: 58 EVPPDGH 64
E D H
Sbjct: 120 ETTHDPH 126
>gi|429858049|gb|ELA32883.1| mRNA splicing protein [Colletotrichum gloeosporioides Nara gc5]
Length = 589
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 LRDAYDRFLLKFPLLFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFK 119
Query: 57 SEV 59
E
Sbjct: 120 MET 122
>gi|380494717|emb|CCF32940.1| pre-mRNA-processing factor 39 [Colletotrichum higginsianum]
Length = 590
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 LRDAYDRFLLKFPLLFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFK 119
Query: 57 SEV 59
E
Sbjct: 120 MET 122
>gi|340923901|gb|EGS18804.1| hypothetical protein CTHT_0054140 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 586
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 59 LRDSYDRFLLKFPLLFGYWKKYADLEFNIAGPEAAEMVYERGCASITNSVDLWTEYCSFK 118
Query: 57 SEVPPDGH 64
E H
Sbjct: 119 METTHTPH 126
>gi|310793902|gb|EFQ29363.1| pre-mRNA-processing factor 39 [Glomerella graminicola M1.001]
Length = 590
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 LRDAYDRFLLKFPLLFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFK 119
Query: 57 SEV 59
E
Sbjct: 120 MET 122
>gi|410916221|ref|XP_003971585.1| PREDICTED: pre-mRNA-processing factor 39-like [Takifugu rubripes]
Length = 758
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACCAL-----LTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R ++ F + CYGYW+K + EV+ + +Q+ S D+W HY
Sbjct: 190 VRKAFDVFFLRYPYCYGYWKKYADIEKKHDNIQAAEEVYRRGLQAIPLSVDLWLHYLTFF 249
Query: 57 SE 58
E
Sbjct: 250 KE 251
>gi|325187054|emb|CCA21596.1| premRNAprocessing factor 39 putative [Albugo laibachii Nc14]
Length = 636
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 19/70 (27%)
Query: 5 VYNSFLADFHLCYGYWRK-------------------ACCALLTRVVEVFEQSMQSATYS 45
YN FL++F LC+GYW K + +V+E+ + + YS
Sbjct: 56 TYNRFLSEFPLCFGYWNKYAQYEYSLGKKNGEEMPLVDSAEAIENAKKVYERGILAVRYS 115
Query: 46 SDVWFHYCNL 55
D+W Y +
Sbjct: 116 VDMWLKYVDF 125
>gi|328701002|ref|XP_003241453.1| PREDICTED: pre-mRNA-processing factor 39-like [Acyrthosiphon pisum]
Length = 630
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHY 52
+R VY FL + LCYGYW+K + +V E+ + + S D+W +Y
Sbjct: 178 VRTVYTKFLGLYPLCYGYWKKYANFEKINNNMDEFEKVLEKGLIAIPISVDLWIYY 233
>gi|198435336|ref|XP_002123360.1| PREDICTED: similar to PRP39 pre-mRNA processing factor 39 homolog
[Ciona intestinalis]
Length = 748
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFH 51
+ R YN+F + LCYGYW+K L + + E+ +++ S D+W H
Sbjct: 118 LARRAYNNFFKRYPLCYGYWKKFSEIERKKGNLIKAQVILERGVRAIPLSIDLWVH 173
>gi|367052611|ref|XP_003656684.1| hypothetical protein THITE_2070058 [Thielavia terrestris NRRL 8126]
gi|347003949|gb|AEO70348.1| hypothetical protein THITE_2070058 [Thielavia terrestris NRRL 8126]
Length = 587
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K + V+E+ S T S D+W YC+
Sbjct: 60 LRDAYDRFLLKFPLLFGYWKKYADLEFNISGPESAEMVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEVPPDGH 64
E H
Sbjct: 120 METTHTPH 127
>gi|50550837|ref|XP_502891.1| YALI0D16225p [Yarrowia lipolytica]
gi|49648759|emb|CAG81082.1| YALI0D16225p [Yarrowia lipolytica CLIB122]
Length = 640
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 4 LVYNSFLADFHLCYGYWRKACCALLT-----RVVEVFEQSMQSATYSSDVWFHYCNLASE 58
L+Y +FL + L +GYW+K L + +V+ V ++S+++ S D+W Y A+
Sbjct: 58 LIYETFLRKYPLLFGYWKKYVDYLNSVGSSEQVLSVHKKSVEAFPQSVDLWTDYVAAAAS 117
Query: 59 VPPD 62
+ D
Sbjct: 118 ILED 121
>gi|171695982|ref|XP_001912915.1| hypothetical protein [Podospora anserina S mat+]
gi|170948233|emb|CAP60397.1| unnamed protein product [Podospora anserina S mat+]
Length = 587
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 LRNSYDRFLLKFPLLFGYWKKYADLEFNIAGPESAEIVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEV 59
E
Sbjct: 120 MET 122
>gi|358395812|gb|EHK45199.1| hypothetical protein TRIATDRAFT_139066 [Trichoderma atroviride IMI
206040]
Length = 591
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
IR Y+ L F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 IRDAYDRLLLKFPLFFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFK 119
Query: 57 SEVPPD 62
E D
Sbjct: 120 METTHD 125
>gi|47219175|emb|CAG01838.1| unnamed protein product [Tetraodon nigroviridis]
Length = 338
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 3 RLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R +++F + CYGYW+K + EV+ + +Q+ S D+W HY
Sbjct: 55 RKGFDAFFLRYPYCYGYWKKYADIEKKHGNIQAAEEVYRRGLQAIPLSVDLWLHYLTFFK 114
Query: 58 E 58
E
Sbjct: 115 E 115
>gi|402077485|gb|EJT72834.1| pre-mRNA-processing factor 39 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 589
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 1 MIRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNL 55
++R Y+ FL F L +GYW+K + ++E+ S ++S D+W YC+
Sbjct: 59 ILREAYDRFLLKFPLLFGYWKKYADLEFNISGPESAEMIYERGCASISHSVDLWKEYCSF 118
Query: 56 ASEV 59
E
Sbjct: 119 KMET 122
>gi|348506574|ref|XP_003440833.1| PREDICTED: pre-mRNA-processing factor 39-like [Oreochromis
niloticus]
Length = 785
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 2 IRLVYNSFLADFHLCYGYWRKACC-----ALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R ++ F + CYGYW+K + EV+ + +Q S D+W HY
Sbjct: 219 VRKAFDVFFLRYPYCYGYWKKYADIEKKHGNVQVAEEVYRRGLQVIPLSVDLWIHYLTFI 278
Query: 57 SE 58
E
Sbjct: 279 KE 280
>gi|367018872|ref|XP_003658721.1| hypothetical protein MYCTH_2294835 [Myceliophthora thermophila ATCC
42464]
gi|347005988|gb|AEO53476.1| hypothetical protein MYCTH_2294835 [Myceliophthora thermophila ATCC
42464]
Length = 587
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ FL F L +GYW+K + V+E+ S T S D+W YC+
Sbjct: 60 LRDSYDRFLLKFPLLFGYWKKYADLEFNISGPESAEMVYERGCASITNSVDLWTEYCSFK 119
Query: 57 SEVPPDGH 64
E H
Sbjct: 120 METTHTPH 127
>gi|340517541|gb|EGR47785.1| predicted protein [Trichoderma reesei QM6a]
Length = 592
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ L F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 VRDAYDRLLLKFPLFFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFK 119
Query: 57 SEVPPD 62
E D
Sbjct: 120 METTHD 125
>gi|358388749|gb|EHK26342.1| hypothetical protein TRIVIDRAFT_188676 [Trichoderma virens Gv29-8]
Length = 611
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 2 IRLVYNSFLADFHLCYGYWRKAC-----CALLTRVVEVFEQSMQSATYSSDVWFHYCNLA 56
+R Y+ L F L +GYW+K A V+E+ S T S D+W YC+
Sbjct: 60 VRDAYDRLLLKFPLFFGYWKKYADLEFNIAGPESAEMVYERGCASITNSVDLWTDYCSFK 119
Query: 57 SEVPPD 62
E D
Sbjct: 120 METTHD 125
>gi|196011786|ref|XP_002115756.1| hypothetical protein TRIADDRAFT_59779 [Trichoplax adhaerens]
gi|190581532|gb|EDV21608.1| hypothetical protein TRIADDRAFT_59779 [Trichoplax adhaerens]
Length = 599
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 6 YNSFLADFHLCYGYWRKACCALL-----TRVVEVFEQSMQSATYSSDVWFHYCNLASE 58
YN F + CYGYW+K + +V++++E + + S D+W Y + S+
Sbjct: 72 YNEFFKHYPYCYGYWKKYAELAIKYTDSNQVLQIYEAGVNAIPLSIDLWESYLSFFSK 129
>gi|358255541|dbj|GAA57233.1| pre-mRNA-processing factor 39, partial [Clonorchis sinensis]
Length = 979
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 3 RLVYNSFLADFHLCYGYWRK-----ACCALLTRVVEVFEQSMQSATYSSDVWFHYCNLAS 57
R ++ F F CYGYW+K R +EV++ +++ S D+W Y A
Sbjct: 7 RKAFDDFFQHFPYCYGYWKKWAEMEKHKGDKVRSLEVYKAGVKAVPLSVDLWTAYLEAAI 66
Query: 58 EVPPDGHRKSEYQE 71
+ H + EY+E
Sbjct: 67 DY---YHGRDEYEE 77
>gi|384488002|gb|EIE80182.1| hypothetical protein RO3G_04887 [Rhizopus delemar RA 99-880]
Length = 432
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 2 IRLVYNSFLADFHLCYGYWRK 22
+ LVY+ FLA F LC+GYW+K
Sbjct: 48 LELVYDHFLAKFPLCFGYWKK 68
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.135 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,134,042,975
Number of Sequences: 23463169
Number of extensions: 29881899
Number of successful extensions: 74446
Number of sequences better than 100.0: 249
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 74059
Number of HSP's gapped (non-prelim): 343
length of query: 73
length of database: 8,064,228,071
effective HSP length: 44
effective length of query: 29
effective length of database: 7,031,848,635
effective search space: 203923610415
effective search space used: 203923610415
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)