BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041863
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 149 bits (377), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 119/222 (53%), Gaps = 39/222 (17%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHA 61
+VL+V DDV +ES +G DW P S IIIT+++K V R V +IYE++ L A
Sbjct: 242 RVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRLCRVNQIYEVQGLNEKEA 301
Query: 62 LDLFSRHAFKRNHLDVGYEKLSSNVMKCAQG----------------------------- 92
L LFS A + + ++S V+K A G
Sbjct: 302 LQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIAFLKLK 361
Query: 93 ---------VLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLV 143
+K SYD L+D+EKNIFLD+ACFFQG++V+ VM L GF+P +GI LV
Sbjct: 362 ECPPAIFVDAIKSSYDTLNDREKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVGIDVLV 421
Query: 144 DKSLIVISNNNKITMHDLKQEFGQEIIQEESINPENRSRLWH 185
+KSL+ IS N++ MH+L Q+ G++II E+ + RSRLW
Sbjct: 422 EKSLVTIS-ENRVRMHNLIQDVGRQIINRETRQTKRRSRLWE 462
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 93 VLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFL-NASGFYPEIGISFLVDKSLIVIS 151
VL++ Y GL + K +FL +A F +DV LV + N G+ L +SLI +S
Sbjct: 1050 VLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLAYRSLIRVS 1109
Query: 152 NNNKITMHDLKQEFGQEIIQEES 174
+N +I MH L ++ G+EI+ ES
Sbjct: 1110 SNGEIVMHYLLRQMGKEILHTES 1132
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 140 bits (352), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 127/234 (54%), Gaps = 41/234 (17%)
Query: 2 KVLIVFDDVTCFTQ-LESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHH 60
KVLIV DD+ LE L G LDW SRIIITTR+K ++ ++ IYE+ AL H
Sbjct: 295 KVLIVLDDIDNKDHYLEYLAGDLDWFGNGSRIIITTRDKHLIEKNDI--IYEVTALPDHE 352
Query: 61 ALDLFSRHAFKRNHLDVGYEKLSSNVMKCAQGV--------------------------- 93
++ LF +HAF + + +EKLS V+ A+G+
Sbjct: 353 SIQLFKQHAFGKEVPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMK 412
Query: 94 ----------LKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLV 143
LKISYDGL+ K++ +FLD+ACF +G++ + ++ L + E G+ L+
Sbjct: 413 NNSYSGIIDKLKISYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILI 472
Query: 144 DKSLIVISNNNKITMHDLKQEFGQEIIQEESINPENRSRLWHHKDTYEVLTYNT 197
DKSL+ IS N++ MHDL Q+ G+ I+ + +P RSRLW K+ EV++ NT
Sbjct: 473 DKSLVFISEYNQVQMHDLIQDMGKYIVNFQK-DPGERSRLWLAKEVEEVMSNNT 525
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 115/234 (49%), Gaps = 40/234 (17%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHA 61
+VL+V DDV ES + DWL P S IIIT+R+KQV + +IYE++ L A
Sbjct: 248 RVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRDKQVFCLCGINQIYEVQGLNEKEA 307
Query: 62 LDLFSRHA-FKRNHLDVGYEKLSSNVMKCAQG---------------------------- 92
LF A K + + ++LS V+ A G
Sbjct: 308 RQLFLLSASIKEDMGEQNLQELSVRVINYANGNPLAISVYGRELKGKKKLSEMETAFLKL 367
Query: 93 ----------VLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFL 142
K +YD L D EKNIFLD+ACFFQG++VN V+ L GF+P + I L
Sbjct: 368 KRRPPFKIVDAFKSTYDTLSDNEKNIFLDIACFFQGENVNYVIQLLEGCGFFPHVEIDVL 427
Query: 143 VDKSLIVISNNNKITMHDLKQEFGQEIIQEESINPENRSRLWHHKDTYEVLTYN 196
VDK L+ IS N++ +H L Q+ G+EII E++ E R RLW +L YN
Sbjct: 428 VDKCLVTIS-ENRVWLHKLTQDIGREIINGETVQIERRRRLWEPWSIKYLLEYN 480
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 93 VLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLVDKSLIVISN 152
VL++SYD L + +K +FL +A F +DV+ V + G+ L D SLI +S+
Sbjct: 1086 VLRVSYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVSS 1145
Query: 153 NNKITMHDLKQEFGQEIIQEESI 175
N +I MH L+++ G+EI+ +S+
Sbjct: 1146 NGEIVMHSLQRQMGKEILHGQSM 1168
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 39/235 (16%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHA 61
KVLI+ DDV QL++L W SRI++TT+NKQ+L + ++ +Y++ A
Sbjct: 290 KVLIILDDVDNIEQLKALAKENQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEA 349
Query: 62 LDLFSRHAFKRN-------HLDVGYEKLSSNVMKC------------------------- 89
L +F +HAFK++ HL + + L+ ++
Sbjct: 350 LTIFCQHAFKQSSPSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKS 409
Query: 90 -----AQGVLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASG-FYPEIGISFLV 143
+ VLK+ YDGL D EK++FL +AC F GQ N + + A+ Y G+ L
Sbjct: 410 RLDGEVEKVLKVGYDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLA 469
Query: 144 DKSLIVISNNNKITMHDLKQEFGQEIIQEESI-NPENRSRLWHHKDTYEVLTYNT 197
DKSLI N +I MH L ++ G+E+++++SI P R L + K+T VL+ NT
Sbjct: 470 DKSLIQKFENGRIEMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNT 524
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 33/217 (15%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHA 61
++L++ DDV + +++ +G+L++ P SRII+T+RN++V ++ +YE++ L+ +
Sbjct: 920 RILVILDDVNDYRDVDTFLGTLNYFGPGSRIIMTSRNRRVFVLCKIDHVYEVKPLDIPKS 979
Query: 62 LDLFSRHAFK----------------------------RNHLDVGYEKLSSNVMKCAQ-- 91
L L R + + +D + KLS V +
Sbjct: 980 LLLLDRGTCQIVLSPEVYKTLSLELVKFSNGNPQVLQFLSSIDREWNKLSQEVKTTSPIY 1039
Query: 92 --GVLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLVDKSLIV 149
G+ + S GLDD E+ IFLD+ACFF D + V L+ GF +G LVDKSL+
Sbjct: 1040 IPGIFEKSCCGLDDNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLT 1099
Query: 150 ISNNNKITMHDLKQEFGQEIIQEESIN-PENRSRLWH 185
IS +N + M Q G+EI+++ES + P +RSRLW+
Sbjct: 1100 ISQHNLVDMLSFIQATGREIVRQESADRPGDRSRLWN 1136
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 109/231 (47%), Gaps = 40/231 (17%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHA 61
++L+V DDV ES + LDW S IIIT+ +KQV ++ +IY ++ L H A
Sbjct: 272 RILVVLDDVRDSLAAESFLKRLDWFGSGSLIIITSVDKQVFAFCQINQIYTVQGLNVHEA 331
Query: 62 LDLFSRHAFKRNHLDVGYEKLSSNVMK--------------------------------C 89
L LFS+ F N + KLS V+ C
Sbjct: 332 LQLFSQSVFGINEPEQNDRKLSMKVIDYVNGNPLALSIYGRELMGKKSEMETAFFELKHC 391
Query: 90 A----QGVLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLVDK 145
Q VLK +Y L D EKNI LD+A FF+G+ VN VM L S ++P + I LVDK
Sbjct: 392 PPLKIQDVLKNAYSALSDNEKNIVLDIAFFFKGETVNYVMQLLEESHYFPRLAIDVLVDK 451
Query: 146 SLIVISNNNKITMHDLKQEFGQEIIQEESINPENRSRLWHHKDTYEVLTYN 196
++ IS N + M++L Q+ QEI E E +R+W +L Y+
Sbjct: 452 CVLTISENT-VQMNNLIQDTCQEIFNGEI---ETCTRMWEPSRIRYLLEYD 498
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 43/234 (18%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHA 61
KVLI+ DDV L++L+G +W SRII+ T+++Q+L+ E+ IYE+E H A
Sbjct: 286 KVLILLDDVDSLEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDLIYEVEFPSEHLA 345
Query: 62 LDLFSRHAFKRNHLDVGYEKLSSNVMKCAQGV---------------------------- 93
L + R AF ++ +++L+ V K A +
Sbjct: 346 LTMLCRSAFGKDSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKGRTKEWWMEMMPRLRN 405
Query: 94 ---------LKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLVD 144
L++SYD L K++++FL +AC F G +V+ V + L + +G + L +
Sbjct: 406 GLNGDIMKTLRVSYDRLHQKDQDMFLYIACLFNGFEVSYVKDLLKDN-----VGFTMLTE 460
Query: 145 KSLIVISNNNKITMHDLKQEFGQEIIQEESI-NPENRSRLWHHKDTYEVLTYNT 197
KSLI I+ + I MH+L ++ G+EI + +S NP R L + +D +EV+T T
Sbjct: 461 KSLIRITPDGYIEMHNLLEKLGREIDRAKSKGNPGKRRFLTNFEDIHEVVTEKT 514
>sp|Q9LVT1|DRL39_ARATH Putative disease resistance protein At5g47280 OS=Arabidopsis
thaliana GN=At5g47280 PE=3 SV=1
Length = 623
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 4 LIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVRKIYEIEALEYHHALD 63
L++ DDV L+ L+ ++ P + ++ +++K V + R Y++E L H A
Sbjct: 86 LVILDDVRTRESLDQLMFNI----PGTTTLVVSQSKLV----DPRTTYDVELLNEHDATS 137
Query: 64 LFSRHAFKRNHLDVGYEK-LSSNVMKCAQGV---LKISYDGLDDKEKN 107
LF AF + + G+ K L V+ ++G+ LK+ L+D+ +
Sbjct: 138 LFCLSAFNQKSVPSGFSKSLVKQVVGESKGLPLSLKVLGASLNDRPET 185
>sp|B2S1L1|RUVB_BORHD Holliday junction ATP-dependent DNA helicase RuvB OS=Borrelia
hermsii (strain DAH) GN=ruvB PE=3 SV=1
Length = 352
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 78 GYEKLSSNVMKCAQGVLKISYDGLDDKEKNIFLDVACFFQGQDVNL 123
GY+ ++ N++ +LKI ++GLD++++NI + F+G V +
Sbjct: 240 GYDLITENIVSDGLEMLKIDHEGLDEQDRNILRSLILKFKGGPVGV 285
>sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190 OS=Arabidopsis thaliana
GN=At4g27190 PE=2 SV=1
Length = 985
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 94 LKISYDGLDDKEKNIFLDVACFFQ--GQDVNLVMNFLNASGFYPEIG 138
LK+SYD L+DK K FL A F + +V V+ + A GF E+G
Sbjct: 383 LKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELG 429
>sp|Q1MIC6|RL6_RHIL3 50S ribosomal protein L6 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rplF PE=3 SV=1
Length = 177
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 91 QGVLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNASGFYPEIGISFLVDKSL-IV 149
+G+ K DG + K + + QG+++ L + F + + P +GIS +V K IV
Sbjct: 73 EGIFKGVKDGFERKLEINGVGYRAAMQGKNLQLALGFSHDVIYEPPVGISIVVPKPTEIV 132
Query: 150 ISNNNKITMHDLKQEF 165
+S NK + + E
Sbjct: 133 VSGINKQQVGQVAAEI 148
>sp|A1SX22|RLMG_PSYIN Ribosomal RNA large subunit methyltransferase G OS=Psychromonas
ingrahamii (strain 37) GN=rlmG PE=3 SV=1
Length = 382
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 30 SRIIITTRNKQVLRNWEVRKIYEIEALEY--HHALDLFSRHAFKRNHLDVGYEKLSSNVM 87
SR+I + + + E+ +EIE L++ H+ ++FSR NHLD+G L N+
Sbjct: 177 SRLIFSLPIIKEVPEKEIAITWEIEKLDWKIHNHANVFSR-----NHLDIGGRFLMDNLP 231
Query: 88 K----------CAQGVLKISYDGLDDKEKNIFLD 111
K C G++ ++ K + F+D
Sbjct: 232 KGDFSKVVDLGCGNGIIGMAASAAYPKAQITFID 265
>sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13
PE=2 SV=2
Length = 835
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVR-KIYEIEALEYHH 60
K L+V DD+ +SL +L SR+IITTR K V + R +++ L +
Sbjct: 271 KYLVVVDDIWEREAWDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEE 330
Query: 61 ALDLFSRHAFK 71
+ +LF + AF+
Sbjct: 331 SWELFEQRAFR 341
>sp|Q4A6V9|GATB_MYCS5 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Mycoplasma synoviae (strain 53) GN=gatB PE=3 SV=1
Length = 473
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 19/126 (15%)
Query: 71 KRNHLDVGYEKLSSNVMKCAQGVLKISYDGLDDKEKNIFLDVACFFQGQDVNLVMNFLNA 130
K N +D+GY V K A + Y + K N+ +D F +
Sbjct: 37 KANQIDLGYPGTLPQVNKKA-----VKYAIMLAKALNMQIDSNLRFDRKHY--------- 82
Query: 131 SGFYPEIGISFLVDKSLIVISNNNKITMHDLKQEFGQEIIQEESINPENRSRLWHHKDTY 190
FYP++ + + + I +I +++ +EF I E I+ E + HHKD Y
Sbjct: 83 --FYPDLPKGYQITQFYHPIGREGQIKLNNNGKEFEVNI---ERIHLEEDTARQHHKDNY 137
Query: 191 EVLTYN 196
L YN
Sbjct: 138 SQLDYN 143
>sp|Q9STE5|R13L2_ARATH Putative disease resistance RPP13-like protein 2 OS=Arabidopsis
thaliana GN=RPP13L2 PE=3 SV=1
Length = 847
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 2 KVLIVFDDVTCFTQLESLIGSLDWLTPVSRIIITTRNKQVLRNWEVR-KIYEIEALEYHH 60
+ L+V DD+ LESL +L SR+IITT + V + R + I L +
Sbjct: 267 RYLVVVDDIWESEALESLKRALPCSYQGSRVIITTSIRVVAEGRDKRVYTHNIRFLTFKE 326
Query: 61 ALDLFSRHAFK 71
+ +LF + AF+
Sbjct: 327 SWNLFEKKAFR 337
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,963,271
Number of Sequences: 539616
Number of extensions: 2858665
Number of successful extensions: 7381
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 7355
Number of HSP's gapped (non-prelim): 34
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)