BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041871
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 346 bits (887), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 217/437 (49%), Positives = 284/437 (64%), Gaps = 61/437 (13%)
Query: 2 LFHVEAQSIADDSPSP----DTVSNFKPSLAVVIGILCVMFILTFILLLYAKFCH---RA 54
L H A + +P P D V+NF+PSLAVV G+L +MF LTF+LL+YAK CH R+
Sbjct: 11 LLHSYASA---QTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRS 67
Query: 55 SS----LFANTQIHNPALIRSTS---RFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCL 107
S RST+ RFSG+DK IESLP FRFS+LKGSKQGL+C+VCL
Sbjct: 68 GSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCL 127
Query: 108 SKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVNA-EDPTIFAYSNSMRFMF 166
SKFE EILRLLPKC+HAFHI CIDQWLE+H++CPLCR +V+ ED ++ NS RF+
Sbjct: 128 SKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFL- 186
Query: 167 NNSERREDSNIELFIQREEEHR--------GSSRFSIGSSFRKN-KEPNKEEELLIQEEA 217
N SE REDS++EL+I+REEE GSSRFSIG SFRK K NKE+ LL +E
Sbjct: 187 NQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKEKTLL--DEH 244
Query: 218 VDGDDDERILHKHNHKIIVSDVIFKNRWSSASSSDLMLLNSELINDMSSNRFSNPNDFGQ 277
V+ D+++++HK NH+I+VSDV+FKNRWS+ SSSDLM LNSE++N +SS RFS+ +
Sbjct: 245 VNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFSSLDH--- 301
Query: 278 FSTKRAIENNE-QILKIKEEMEMKRLFENKFSTISKTSPGVLVPNVPSSSGSNKIISSLN 336
KR E ++ IL+IKEEME KR+ ENK ++++ + + SGS
Sbjct: 302 --VKRGDEEDQIGILRIKEEMEAKRMLENKLTSMT-----TMFSSENGDSGSK------- 347
Query: 337 TSRTINPTTDRKSMSEITAVSRFQDLGMKNRIRESSID--------GN---ERTRRLWLP 385
SR++ R+S+S+ITAV R + + S+ + GN ER RRLWLP
Sbjct: 348 -SRSVMIEPGRRSVSDITAVPRLS-ISIHGDCSGSAAETASALQNGGNETEERRRRLWLP 405
Query: 386 IARRTVQWFADRERRSR 402
IAR+T QWFA+RE+RS+
Sbjct: 406 IARKTAQWFANREKRSQ 422
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 188/417 (45%), Positives = 252/417 (60%), Gaps = 79/417 (18%)
Query: 4 HVEAQSIADDSPSPDTVSN---FKPSLAVVIGILCVMFILTFILLLYAKFCH---RASSL 57
+V AQS P P+ + FKPSLA++ G+ ++F LTF+LL+YAK H R+ +
Sbjct: 19 YVSAQS----PPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETD 74
Query: 58 FANTQIHN----PALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDT 113
+I + L +SRFSG+DK IESLPFFRFS+LKG KQGLEC+VCLSKFED
Sbjct: 75 SDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDV 134
Query: 114 EILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVNAED--PTIFAYSNSMRFMFNNSER 171
EILRLLPKC+HAFHI CIDQWLE+H++CPLCR +VN ED + S S+R + + R
Sbjct: 135 EILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETR 194
Query: 172 REDSNIELFIQREE-EHRGSSRFSIGSSFRKNKEPNKEEELLIQEEAVDGDDDERILHKH 230
EDS +E++I+REE + GSSRF SSFRK ++ LL++ E + D+++++HK
Sbjct: 195 EEDSRLEIYIEREEGTNDGSSRF---SSFRK----ILKKSLLLEREGNENIDEKKLMHKF 247
Query: 231 NHKIIVSDVIFKNRWSSASSSDLMLLNSELINDMSSNRFSNPNDFGQFSTKRAIENNEQI 290
NH+I+VSD +FKNRWS+ +SSDL L SE++N +SS+RFS S R N
Sbjct: 248 NHRIVVSDAVFKNRWSNITSSDLTFLTSEMLNSVSSDRFS--------SVDRVHRGN--- 296
Query: 291 LKIKEEMEMKRLFENKFSTISKTSPGVLVPNVPSSSGSNKIISSLNTSRTINPTTDRKSM 350
L+ KE+MEMKR+ L+ + SS R+++
Sbjct: 297 LRDKEDMEMKRM---------------LIKHKDSS---------------------RRTV 320
Query: 351 SEITAVSRFQDLGMKNRIRESSIDGN--------ERTRRLWLPIARRTVQWFADRER 399
SEIT VSR + +G R +S N ER RRLWLPIARRT QWF +RE+
Sbjct: 321 SEITTVSREKAVGGSYRGSTASTSQNYAVTATTEERRRRLWLPIARRTAQWFVNREK 377
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 52/294 (17%)
Query: 20 VSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTS------ 73
S+ P +AVVI +L F LTF+LLLY K C R + A+ R
Sbjct: 51 TSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGG 110
Query: 74 ------RFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFH 127
+ SGID++VIESLP FRF +L G K GLECAVCL++FE TE+LRLLPKCKHAFH
Sbjct: 111 GVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFH 170
Query: 128 ISCIDQWLEKHSSCPLCRLKVNAEDPTIFAYSNS-MRFMFNNSERREDSN----IELFI- 181
+ C+D WL+ HS+CPLCR +V+ ED + NS F+ E +N + FI
Sbjct: 171 VECVDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIP 230
Query: 182 ---------------QREEEHRGSSRF---------SIGSSFRKNKEPNKEEE-----LL 212
R E R SS + S+ SS + N ++ E L
Sbjct: 231 VSRISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCL 290
Query: 213 IQEEAVDG----DDDERILHKHNHKIIVSDVIFKN-RWSSASSSDLMLLNSELI 261
+ + DG + E + H+II+S + RWS SDL+ L SE+I
Sbjct: 291 DRLQRKDGLLLIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMI 344
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 14 SPSP-DTVSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRST 72
SPSP D + PS V +L +F LT +L +Y + C R++ + N A +
Sbjct: 32 SPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRA-NDGS 90
Query: 73 SRFSGIDKAVIESLPFFRFSSLKGSKQG---LECAVCLSKFEDTEILRLLPKCKHAFHIS 129
SR G+D AV+ES P F +SS+K SK G LECA+CL++ ED E +RLLP C H FHI
Sbjct: 91 SRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHID 150
Query: 130 CIDQWLEKHSSCPLCRLKVNAE 151
CID WL H++CP+CR + A+
Sbjct: 151 CIDTWLYSHATCPVCRSNLTAK 172
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 29 VVIGILCVMFILTFILLLYAKFCHR----ASSLFANTQIHNPALIRSTSRFS----GIDK 80
+IGIL IL L +K+CHR +SS N + ST R S G+++
Sbjct: 60 ALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNE 119
Query: 81 AVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSS 140
++I+S+ +++ S G G +C+VCLS+FE+ E LRLLPKC HAFH+ CID WL+ HS+
Sbjct: 120 SMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN 179
Query: 141 CPLCRLKVNA-EDPTIFAYSNSMRFMFNNS 169
CPLCR V +PT N + N S
Sbjct: 180 CPLCRAFVTGVNNPTASVGQNVSVVVANQS 209
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 5 VEAQSIADDSPSPDTVSNFKPSLAVVIGILCVMFILTFILLLYAKFC-HRASSL-FANTQ 62
V Q+ S S F P++A+++ +L +F +Y + C R + + N
Sbjct: 41 VAGQATHGGSDVSGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPN 100
Query: 63 IHNPALIRSTSRFSGIDKAVIESLPFFRFSSLKG---SKQGLECAVCLSKFEDTEILRLL 119
L + + G+D ++IE+ P F++S++K K+ LEC+VCL++FED E LRL+
Sbjct: 101 DAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLI 160
Query: 120 PKCKHAFHISCIDQWLEKHSSCPLCR 145
PKC H FH CID WL H++CPLCR
Sbjct: 161 PKCCHVFHPGCIDAWLRSHTTCPLCR 186
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 30 VIGILCVMFILTFILLLYAKFCHRA------SSLFANTQIHNPALIRSTSRFS--GIDKA 81
V+ ++ V+F++ F ++ + FC R+ SS+F +T + + R + G+D
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110
Query: 82 VIESLPFFRFSSLKG---SKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKH 138
IE+ P F +S +K K G+ECAVCL +FED E LRL+P C H FH C+D WL +H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 139 SSCPLCR 145
S+CPLCR
Sbjct: 171 STCPLCR 177
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 7 AQSIADDSPSPDTVSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRA--SSLFANTQIH 64
+QS + P P++AV++ IL +Y + C + +
Sbjct: 29 SQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGAR 88
Query: 65 NPALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQG---LECAVCLSKFEDTEILRLLPK 121
+ A + + +R G+D +V+E+ P F +S +K K G LECA+CL++FED E LRLLPK
Sbjct: 89 SRATVNAAAR--GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 146
Query: 122 CKHAFHISCIDQWLEKHSSCPLCR 145
C H FH CID WLE H +CP+CR
Sbjct: 147 CDHVFHPHCIDAWLEAHVTCPVCR 170
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 75/133 (56%), Gaps = 24/133 (18%)
Query: 28 AVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNP------------ALIRSTSRF 75
AV+I +L MF L F +L C++ + NT H A R TSR
Sbjct: 47 AVIIAML--MFTLLFSMLACC-VCYK----YTNTSPHGTSSDTEEGGHGEVAFTRRTSR- 98
Query: 76 SGIDKAVIESLPFFRFSSLKG---SKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCID 132
G+ K VI S P F +S +KG K G+ECA+CL++FED E LRL+P C HAFH SCID
Sbjct: 99 -GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCID 157
Query: 133 QWLEKHSSCPLCR 145
WL S+CP+CR
Sbjct: 158 VWLSSRSTCPVCR 170
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 21 SNFKPSLAVVIGILCVMFILTFILLLYAKFC-HRASSLFANTQIHNPALIRSTSRFSGID 79
++F P+ A+++ +L +F + +Y + C A + + N +R T+ G+D
Sbjct: 33 TSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTE-PGLD 91
Query: 80 KAVIESLPFFRFSSLKG---SKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLE 136
+VIE+ P F +S++K K+ LEC VCL++FED E LRL+P+C H FH CID WL
Sbjct: 92 ASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLR 151
Query: 137 KHSSCPLCR 145
++CPLCR
Sbjct: 152 SQTTCPLCR 160
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 27/146 (18%)
Query: 25 PSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTSRFS-------- 76
P L +IGIL FIL L +K+CHR ++T A+ R +S ++
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA--AINRISSDYTWQGTNNNN 115
Query: 77 -----------------GIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLL 119
G+D+++I+S+ +++ + G + +C+VCLS+F++ E LRLL
Sbjct: 116 NNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLL 175
Query: 120 PKCKHAFHISCIDQWLEKHSSCPLCR 145
PKC HAFH+ CID WL+ HS+CPLCR
Sbjct: 176 PKCNHAFHVPCIDTWLKSHSNCPLCR 201
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 20/193 (10%)
Query: 6 EAQSIADDSPSPDTVSNFK-PSLAVVIGILCVM-----FILTFILLLYA--KFCHRASSL 57
EA S S + T+ N K PS + ++ +LC++ I+ F+ +LY KF ++S+L
Sbjct: 91 EALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRKSSTL 150
Query: 58 FANTQI-HNPALIRSTS---------RFSGIDKAVIESLPFFRFSSLKGS-KQGLECAVC 106
F +NP L +S SG+D+ I++LP F + ++ S +Q +CAVC
Sbjct: 151 FPIPHFNYNPDLFSFSSPQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVC 210
Query: 107 LSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVNAEDPTIFAYSNSMRFMF 166
L++F DT+ LRLLP C HAFH+ CID WL +S+CPLCR ++ + + +S ++
Sbjct: 211 LNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSN-VCYNHSETLVAPL 269
Query: 167 NNSERREDSNIEL 179
+ ++ +D L
Sbjct: 270 SGHQQVDDGKASL 282
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Query: 25 PSLAVVIGILCVMFILTFILLLYAKFCHRAS----SLFANTQIHNPALIRSTS------- 73
P + +I +L V+F + IL L ++ + S N NP S +
Sbjct: 51 PIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQ 110
Query: 74 ----RFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHIS 129
SG+D+A+I++LP F + +KG+K+ +CAVCL +F + + LRLLP C HAFHI
Sbjct: 111 LFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHID 170
Query: 130 CIDQWLEKHSSCPLCR 145
CID WL +S+CPLCR
Sbjct: 171 CIDTWLLSNSTCPLCR 186
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 21 SNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDK 80
+NF + I +L + L+ + K +RA A+ ++ + R G++K
Sbjct: 44 TNFPTETVIAIIVLAIFISLSMVACFLHKTFYRAEVEAASQEVFHSRARR------GLEK 97
Query: 81 AVIESLPFFRFSSLKG---SKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEK 137
++ES P F +S +KG K G+ECA+CLS+F D E LR +P C H FH +CID WL
Sbjct: 98 ELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSS 157
Query: 138 HSSCPLCRLKVNAEDPTIFAYSNSMRFMFNNSERREDSNIEL 179
S+CP CR ++ + + Y + N +R E S ++L
Sbjct: 158 QSTCPACRANLSLKPGESYPYPIT-DLETGNEQRDEHSLLQL 198
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 33 ILCVMFILTFILLLYAKFCHRASSLFANTQIHNPA--LIRSTSRFSGIDKAVIESLPFFR 90
I+ ++ + FI L C +F +I ++ S +R G++K VIES P F
Sbjct: 51 IIAIVVLAIFISLGMVSCCLHC--IFYREEIGAAGQDVLHSRAR-RGLEKEVIESFPTFL 107
Query: 91 FSSLKG---SKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLK 147
+S +KG K G+ECA+CLS+FED E LR +P C H FH +CID WL S+CP+CR
Sbjct: 108 YSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRAN 167
Query: 148 VNAEDPTIFAYSN 160
++ + + Y N
Sbjct: 168 LSLKPGESYPYLN 180
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 30/173 (17%)
Query: 25 PSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIH-------NPALIRSTSRF-- 75
P++ VI IL V+F ++ +L L +F + S A+++ + + AL R +
Sbjct: 43 PAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFH 102
Query: 76 ---SGIDKAVIESLPFFRFSSL----------KGSKQGLECAVCLSKFEDTEILRLLPKC 122
SG+D+A I++LP F + + +++ +CAVCL +F + + LRLLP C
Sbjct: 103 LNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMC 162
Query: 123 KHAFHISCIDQWLEKHSSCPLCRLKVNAEDPTIFAYSNSMR-FMFNNSERRED 174
HAFH++CID WL+ +S+CPLCR T+F+ SM MF+ + RED
Sbjct: 163 SHAFHLNCIDTWLQSNSTCPLCR-------GTLFSPGFSMENPMFDFDDIRED 208
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 25/152 (16%)
Query: 25 PSLAV-VIGILCVMFILTFILLLYAKFC---HRASSL--FANTQ----IHNPALIRSTS- 73
P LAV VIGIL F+L + K C HR L F+ ++ +P ++ S
Sbjct: 35 PILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPEL 94
Query: 74 RFSGIDKAVIESLPFFRFSSLKGSKQGL--------------ECAVCLSKFEDTEILRLL 119
R G+D++VI ++P F+F G+ EC+VCLS+F+D E LR++
Sbjct: 95 RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154
Query: 120 PKCKHAFHISCIDQWLEKHSSCPLCRLKVNAE 151
P C H FHI CID WL+ +++CPLCR +V+ +
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCRTRVSCD 186
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 16/129 (12%)
Query: 34 LCVMFILTFILLLYAKFCHRA------SSLFANTQIHNPALIRSTSRFSGIDKAVIESLP 87
+ +F + F +Y + C A + A ++ N + R G+D IE+ P
Sbjct: 53 IAALFFMGF-FTVYIRHCTGAVDGSVTPAGGARRRVTNATVAR------GLDAETIETFP 105
Query: 88 FFRFSSLKGSKQG---LECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLC 144
F +S +K K G LECA+CL++FED E LRLLPKC H FH CI WL+ H +CP+C
Sbjct: 106 TFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVC 165
Query: 145 RLKVNAEDP 153
R + + P
Sbjct: 166 RTNLAEQTP 174
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 21/146 (14%)
Query: 22 NFKPSLAVVIGILCVMFILTFILLLYAKFC-----HRASSLFANTQI------------H 64
N P + + GI F+L L +K+C + A+S + I
Sbjct: 57 NLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQD 116
Query: 65 NPALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQ--GLECAVCLSKFEDTEILRLLPKC 122
+P + S++ +G+D +I+ + FF+ + + G +C++CL +F + E LRLLPKC
Sbjct: 117 DPFALESST--AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKC 174
Query: 123 KHAFHISCIDQWLEKHSSCPLCRLKV 148
H FH+ CID+WL+ HS+CPLCR K+
Sbjct: 175 NHTFHVVCIDRWLKSHSNCPLCRAKI 200
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 30 VIGILCVMFILTFILLLYAKF---------------CHRASSLFANTQIHNPALIRSTSR 74
I IL + IL L LYA++ RA+ +F A SR
Sbjct: 34 AIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASR 93
Query: 75 FSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQW 134
G+D VI+SLP F FS + K +ECAVCLS+FE++E R+LP C+H FH+ CID W
Sbjct: 94 --GLDPNVIKSLPVFTFSD-ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150
Query: 135 LEKHSSCPLCRLKVNA 150
HS+CPLCR V +
Sbjct: 151 FHSHSTCPLCRSLVES 166
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 7 AQSIADDSPSPDTVSNF-KPSLAVVIG-ILCVMFILTFILLLYAKFCHRASSLFANTQIH 64
A+ I ++ P ++ KP L +++ IL V+F + F + + K + + N H
Sbjct: 4 AKPINQNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYH 63
Query: 65 NPALIRSTSRFS----------GIDKAVIESLPFFRFSSLKG---SKQGLECAVCLSKFE 111
N L + + G++ +I+S P F FSS+K K GLECA+CL +FE
Sbjct: 64 N-GLPENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFE 122
Query: 112 DTEI-LRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVNAEDP 153
+ I LRLL C H FH CIDQWLE + +CP+CR ++ P
Sbjct: 123 EEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAP 165
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 76 SGIDKAVIESLPFFRFSSLKGSK-QGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQW 134
SG+D+++I++LP F + S+ G K +C VCL +FE + LRLLPKC HAFH+ CID W
Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTW 157
Query: 135 LEKHSSCPLCR 145
L HS+CPLCR
Sbjct: 158 LLSHSTCPLCR 168
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 18 DTVSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFAN-----TQIHNPALIRST 72
D + P + + I +L ++F + ++ L KF HR + + T+ R
Sbjct: 27 DLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQ 86
Query: 73 SRF----SGIDKAVIESLPFFRFSSLKGSKQGL-ECAVCLSKFEDTEILRLLPKCKHAFH 127
+RF + ID++ I++LP + ++ G + L +CAVCL +F + LRLLPKC HAFH
Sbjct: 87 TRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFH 146
Query: 128 ISCIDQWLEKHSSCPLCR 145
+ CID WL +S+CPLCR
Sbjct: 147 VECIDTWLLTNSTCPLCR 164
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 76 SGIDKAVIESLPFFRFSSLKGSKQ-GLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQW 134
SG+D++ I++LP F + S+ G K +CAVCL +FE + LRLLPKC HAFH+ CID W
Sbjct: 106 SGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTW 165
Query: 135 LEKHSSCPLCR 145
L HS+CPLCR
Sbjct: 166 LLSHSTCPLCR 176
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 77 GIDKAVIESLPFFRFSSLKGSK---QGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQ 133
GIDK VIES P F +S +K K G+ECA+CL +FED E LR +P C H FH +CID+
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 134 WLEKHSSCPLCRLKVNAEDPTIFAYSNSMRFMFNNSER 171
WL S+CP+CR ++ + F + SM N++R
Sbjct: 151 WLSSRSTCPVCRANLSLKSGDSFPHP-SMDVETGNAQR 187
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 84/146 (57%), Gaps = 17/146 (11%)
Query: 21 SNFKPSLAV-VIGILCVMFILTFILLLYAKFC---HRASSLFAN---TQIHNPALIRSTS 73
+NF P LA+ VIGIL F+L + K C H+ +F + NP +I S
Sbjct: 39 TNF-PILAIAVIGILATAFLLVSYYIFVIKCCLNWHQID-IFRRRRRSSDQNPLMIYSPH 96
Query: 74 RFS-GIDKAVIESLPFFRFSS---LKG----SKQGLECAVCLSKFEDTEILRLLPKCKHA 125
+ G+D++ I ++P F+F + G SK EC+VCL++F++ E LR++P C H
Sbjct: 97 EVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHV 156
Query: 126 FHISCIDQWLEKHSSCPLCRLKVNAE 151
FHI CID WL+ +++CPLCR V+ E
Sbjct: 157 FHIDCIDIWLQGNANCPLCRTSVSCE 182
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 44 LLLYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQGLEC 103
L LY ++ SS F T + +S G++ ++I+SLP F FS++ + +EC
Sbjct: 18 LHLYYRWYLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVT-ALFAMEC 76
Query: 104 AVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKV 148
+VCLS+F+D E R++P CKH FH+ CID W HSSCPLCR ++
Sbjct: 77 SVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 19 TVSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASS----LFANTQIHNPALIRSTSR 74
T F P+ VV+ L F+L + + C +A + F +T H P + +
Sbjct: 39 TAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAAS 98
Query: 75 FSG--IDKAVIESLPFFRFSSLKG---SKQG-LECAVCLSKFEDTEILRLLPKCKHAFHI 128
+ +DK V+E+ P + +K +K G LECAVCL++F D++ LR+LP C H FH
Sbjct: 99 RASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHP 158
Query: 129 SCIDQWLEKHSSCPLCRLKVNAEDPTIFAYSNS 161
CID WL +CPLCR + A ++ A +S
Sbjct: 159 DCIDPWLAAAVTCPLCRANLTAPPVSLAAAESS 191
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 7 AQSIADDSPSPDTVSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANT----- 61
A + ADDS P F P + +IG+L F+L +K+C SSL
Sbjct: 43 AGTSADDSSGP----VFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSS 98
Query: 62 ------------QIHNPALIRS-----TSRFSGIDKAVIESLPFFRFSSLKGSKQGLECA 104
H RS S SG+D+ +I + ++ G +C+
Sbjct: 99 GGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCS 158
Query: 105 VCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVN 149
VCL +F D E LRLLP+C HAFH CID WL+ HS+CPLCR +
Sbjct: 159 VCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANIT 203
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 10/164 (6%)
Query: 62 QIHNPA-LIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLP 120
Q+ +P LIR+T G+ +++I S+ + G + +C VCL++FE+ E LRLLP
Sbjct: 139 QVDHPIWLIRTT----GLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLP 194
Query: 121 KCKHAFHISCIDQWLEKHSSCPLCRLKVNAEDPTIFAYSNSMRFMFNNSERREDSNIELF 180
KC HAFHISCID WL H++CPLCR + T YS + S S++E
Sbjct: 195 KCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGS----GSHLEND 250
Query: 181 IQREEEHRGSSRFSIGSSFRKNKEPNKEEELLIQEEAVDGDDDE 224
EE+H G + S F+++ + + E+ + DG + E
Sbjct: 251 GVDEEDH-GEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETE 293
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 26 SLAVVIGILCVMFILTFILLLYAKFCHRASS-LFANTQIHNPALI------RSTSRFSGI 78
+L V+ IL +FI+ A C R +S F + + NP S + G+
Sbjct: 14 TLLVITIILFAIFIVGL-----ASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRGL 68
Query: 79 DKAVIESLPFFRFSSLKGSK---QGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWL 135
D+A+I S P F +S +K + G+ECAVC+ +FED E LRL+P+C H FH C+ WL
Sbjct: 69 DEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWL 128
Query: 136 EKHSSCPLCRLKV 148
HS+CPLCR+ +
Sbjct: 129 SDHSTCPLCRVDL 141
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 14 SPSPDTVSNFKPSLAVVIG-ILCVMFILTFILLLYAKF----------CHRASSLFANTQ 62
+P P P L V++ IL V F + F L + K H ++
Sbjct: 10 APQPPQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNP 69
Query: 63 IHNPALIRSTSRFSGIDKAVIESLPFFRFSSLKG---SKQGLECAVCLSKFEDTEILRLL 119
+ P + G++ +I S P F +SS+K K GLECA+CL +F+ +LRLL
Sbjct: 70 LQQP---EAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLL 126
Query: 120 PKCKHAFHISCIDQWLEKHSSCPLCR 145
C H FH CID W E H +CP+CR
Sbjct: 127 TTCYHVFHQECIDLWFESHRTCPVCR 152
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 46 LYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAV 105
LYAKF S F + + S G+D VI SLP F +K G ECAV
Sbjct: 48 LYAKFVLHRRSAFQDLSFS----VVSQPPKRGLDSLVIASLPTF-VVGIKNDVAGTECAV 102
Query: 106 CLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVNAEDPTI 155
CLS E+ + R+LP CKH FH+SC+D WL S+CP+CR + P +
Sbjct: 103 CLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRL 152
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 25 PSLAVVIGILC-VMFILTFILLLYAKFCHRASSLF--ANTQIHNPALIRSTSRFSGIDKA 81
P V+ G+L V+F F L L+ +R + + T + + + +G+D
Sbjct: 22 PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPENTGLDPF 81
Query: 82 VIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSC 141
+I S P F +SS G ECA+CLS+F D + +RL+ C+H FH +CID W E H +C
Sbjct: 82 IIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTC 141
Query: 142 PLCRLKVN 149
P+CR +++
Sbjct: 142 PVCRCELD 149
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%)
Query: 77 GIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLE 136
G+ ++ I S+ F +G G EC+VCL++FE+ E LRLLPKC HAFH++CID WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLL 168
Query: 137 KHSSCPLCRLKV 148
H +CPLCR V
Sbjct: 169 SHKNCPLCRAPV 180
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 76 SGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWL 135
+G+D +++S+ F K GLECAVCLS D + R+LP+C H FH+ CID W
Sbjct: 94 AGLDSKILQSIHVVVFKCTD-FKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWF 152
Query: 136 EKHSSCPLCRLKVNAEDPTIFAYSNSM 162
+ HS+CPLCR V + + T S +
Sbjct: 153 QSHSTCPLCRNTVGSVEDTTHGGSEGL 179
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 77 GIDKAVIESLPFFRFSSLKGSKQG---LECAVCLSKFEDTEILRLLPKCKHAFHISCIDQ 133
G+D I+S P F ++ +G + G LEC VCL++F+D E LRL+P C H FH C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 134 WLEKHSSCPLCRLKV 148
WL S+CP+CR KV
Sbjct: 116 WLSHSSTCPICRAKV 130
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 15 PSPDTVS-NFKPSLAVVIGILCVMFILTFILLLYAKFC-HRASSLFANTQIHNPALIRST 72
P+P T N K LA V + V+ I+ F L LYA+F R F P + R
Sbjct: 20 PNPSTYDLNSKIMLAAVASLSGVILIV-FALHLYARFVLRRRREAFRGL----PVIFRHP 74
Query: 73 SRFS--GIDKAVIESLPFFRFSSLKG-SKQGLECAVCLSKFEDTEILRLLPKCKHAFHIS 129
G++ VI SLP F + G + ECAVCLS ++ + R LP CKH FH+
Sbjct: 75 FEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVD 134
Query: 130 CIDQWLEKHSSCPLCRLKV 148
C+D WL S+CP+CR +V
Sbjct: 135 CVDTWLTTCSTCPVCRTEV 153
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 1 MLFHVEAQSIADDSPSPDTVSN---FKPSLAVVIGILCVMFILTFILLLYAKFCHRASSL 57
+L +A + A+ +P P N F ++ +++ L I L + R +
Sbjct: 4 LLLEPQANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRR 63
Query: 58 F-ANTQIHNP----ALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFED 112
F ++ Q+ N A + + +G+ K ++ +P + S + EC +CL FED
Sbjct: 64 FTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFED 123
Query: 113 TEILRLLPKCKHAFHISCIDQWLEKHSSCPLCRLKVNAEDPTIFAYS 159
E +R+LPKC H FH+ CID WL SSCP CR + E P+ A S
Sbjct: 124 GEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQPSPMAVS 170
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 81 AVIESLPFFRFSSL---KGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEK 137
+V++SLP F+FSS+ S +CAVCLSKFE + LRLLP C HAFH CID WL
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 138 HSSCPLCRLKVNAEDPTIF-----------AYSNSMRFMFNNSERREDSNIELFIQREEE 186
+ +CPLCR + A + + NS R + RR + I + E+
Sbjct: 152 NQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQTPIP---ESVEQ 208
Query: 187 HRGSSRFSIGS 197
HR +SIGS
Sbjct: 209 HR---TYSIGS 216
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 1 MLFHV--EAQSIADDSPSPDTVSNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLF 58
+LF + EA S + SP S+ LAV++ L I+ I + + R +S
Sbjct: 4 LLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCAL--TCIIGLIAVSRCAWLRRIASRN 61
Query: 59 ANTQIHNPALIRSTSRFSGIDKAVIESLPFFRFSSLKGSKQGL-ECAVCLSKFEDTEILR 117
+ Q H P + + G+ K V+ SLP +S + L ECA+CL++F + LR
Sbjct: 62 RSDQTHPPPVAAANK---GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELR 118
Query: 118 LLPKCKHAFHISCIDQWLEKHSSCPLCR 145
+LP+C H FH+SCID WL HSSCP CR
Sbjct: 119 VLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 78 IDKAVIESLPFFRFS----------SLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFH 127
+D V+ SLP +S + G+ECAVCL++ ED E R LP+C H FH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 128 ISCIDQWLEKHSSCPLCRL 146
C+D WL HS+CPLCRL
Sbjct: 159 AECVDMWLGSHSTCPLCRL 177
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 77 GIDKAVIESLPFFRFSSLKGSKQGL----------ECAVCLSKFEDTEILRLLPKCKHAF 126
G+D +VI++LP F +S+ + + +CAVCL +FE+ + +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 127 HISCIDQWLEKHSSCPLCRLKV 148
H+ CID+WL H +CPLCR +
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAI 201
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 45/77 (58%)
Query: 78 IDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEK 137
+D V+E +P F +S EC+VCLS+FE+ + R+LPKC H FH+ CID W
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 138 HSSCPLCRLKVNAEDPT 154
SSCPLCR V P
Sbjct: 148 RSSCPLCRAPVQPAQPV 164
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 29 VVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDKAVIESLPF 88
++ GI+C + + I + R+ S + I P+ R +S GI K ++ LP
Sbjct: 59 LLCGIICSLGLHYIIRCAFI----RSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPV 114
Query: 89 FRFS---SLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCR 145
+S +L G G EC +CLS F E LR+LPKC H FH+ CID+WL +H +CP CR
Sbjct: 115 VNYSPEINLPGV--GEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCR 172
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 28 AVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDKAVIESLP 87
A++ ++CV+ ++ ++ + + + +Q +P + + G+ K V++SLP
Sbjct: 36 ALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAAN-KGLKKKVLQSLP 94
Query: 88 FFRFSSLKG-SKQGLECAVCLSKFEDTEILRLLPKCKHAFHISCIDQWLEKHSSCPLCR 145
FS S++ ECA+CL++F + LR+LP+C H FH++CID WL HSSCP CR
Sbjct: 95 KLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 34/147 (23%)
Query: 28 AVVIGILCVMFILTFILLLYAKF---------------CHRASSLFANTQIHNPALIRST 72
A+++ + V+F+L IL LYAK + I P + R
Sbjct: 28 AIIVLFMAVLFVL--ILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVVTRRQ 85
Query: 73 SRF------------SGIDKAVIESLP--FFRFSSLKGSKQGLECAVCLSKFEDTEILRL 118
R +G+ + SLP FFR S K GLEC++CLS+ + RL
Sbjct: 86 RRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDS---CKDGLECSICLSELVKGDKARL 142
Query: 119 LPKCKHAFHISCIDQWLEKHSSCPLCR 145
LPKC H+FH+ CID W + HS+CP+CR
Sbjct: 143 LPKCNHSFHVECIDMWFQSHSTCPICR 169
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 1 MLFHVEAQSIADDSPSPDTV-SNFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFA 59
+LFH QS +PSP +NF ++ +V+ +L + + L + R S+L
Sbjct: 30 LLFHTHDQS-PTPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVP 88
Query: 60 NTQIHNPALIRSTSRFSGIDKAVIESLPFFRFSS-LKGSKQGLECAVCLSKFEDTEILRL 118
+ + +R T+ +G+ + ++S +S+ L ECA+CLS+F E ++L
Sbjct: 89 SEAGGDNYPVRLTN--TGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKL 146
Query: 119 LPKCKHAFHISCIDQWLEKHSSCPLCR 145
LP C H FH+ CID+WL HSSCP CR
Sbjct: 147 LPTCHHGFHVRCIDKWLSSHSSCPTCR 173
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 69 IRSTSRFSGIDKAVIESLPFFRFSS--LKGSKQGLECAVCLSKFEDTEILRLLPKCKHAF 126
+ ++ R +D+AV++ +P F +SS ++ EC+VCLS+FE+ + RLLPKC H+F
Sbjct: 72 LSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 131
Query: 127 HISCIDQWLEKHSSCPLCRLKVNAEDPTI----FAYSNSMRFMFNNSERR--EDSNIELF 180
H+ CID W S+CPLCR V I + S+ + F ER + + I +
Sbjct: 132 HVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCEREPIDLAGIIVD 191
Query: 181 IQREEEHRGS 190
I RE E GS
Sbjct: 192 ISREVEFEGS 201
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 77 GIDKAVIESLPFFRFSSLKGSKQGLE-CAVCLSKFEDTEILRLLPKCKHAFHISCIDQWL 135
G+D + SLP +R++ K +KQ E C +CLS FE+ E ++++P C H FH+ C+D WL
Sbjct: 115 GLDSQAVRSLPVYRYT--KAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWL 172
Query: 136 EKHSSCPLCR 145
+ +CPLCR
Sbjct: 173 SSYVTCPLCR 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,957,833
Number of Sequences: 539616
Number of extensions: 5919500
Number of successful extensions: 21340
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 20686
Number of HSP's gapped (non-prelim): 757
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)