Your job contains 1 sequence.
>041877
MMKRSMSFSGVNDKCHEDHHVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLE
PERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNK
KLHAELVSLKNKDSNNGQVIHLKKENEGSASNGSDNSSDINLDISRTQVITSPVSSSHLT
SKQLFPTSTRPAAGSMTQLLQGSSIPDHLQCLKIDHHQMVQVQDESFCHMFNGIEEQQAT
ASSFWQWPGQQNFH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041877
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 505 3.3e-57 2
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 507 1.4e-48 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 501 6.0e-48 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 448 2.5e-42 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 356 1.4e-32 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 350 6.0e-32 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 342 4.2e-31 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 342 4.2e-31 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 260 2.1e-22 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 253 1.1e-21 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 242 1.7e-20 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 237 5.7e-20 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 227 6.5e-19 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 218 5.8e-18 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 218 5.8e-18 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 214 1.6e-17 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 214 1.6e-17 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 211 3.2e-17 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 209 5.3e-17 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 205 1.4e-16 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 207 1.4e-16 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 204 1.8e-16 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 203 2.3e-16 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 200 6.5e-16 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 196 1.3e-15 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 192 3.3e-15 1
FB|FBgn0034520 - symbol:lms "lateral muscles scarcer" spe... 167 7.4e-11 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 156 8.0e-09 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 133 9.8e-09 1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 129 2.9e-08 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 129 2.9e-08 1
UNIPROTKB|F1NZJ4 - symbol:HOXD8 "Homeobox protein Hox-D8"... 128 3.7e-08 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 128 3.7e-08 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 125 8.3e-08 1
UNIPROTKB|F8VWZ5 - symbol:HLX "H2.0-like homeobox protein... 124 1.1e-07 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 123 1.4e-07 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 123 1.4e-07 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 122 1.8e-07 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 137 2.8e-07 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 137 2.8e-07 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 137 2.9e-07 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 120 3.1e-07 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 120 3.1e-07 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 120 3.1e-07 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 120 3.1e-07 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 136 3.7e-07 1
UNIPROTKB|F1MZR4 - symbol:LOC516179 "Uncharacterized prot... 119 4.0e-07 1
UNIPROTKB|P09078 - symbol:HOXB8 "Homeobox protein Hox-B8"... 119 4.0e-07 1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 133 4.6e-07 1
UNIPROTKB|P23459 - symbol:HOXD8 "Homeobox protein Hox-D8"... 128 5.2e-07 1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"... 118 5.3e-07 1
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"... 121 5.6e-07 2
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 134 6.8e-07 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 117 6.8e-07 1
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 141 6.9e-07 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 134 6.9e-07 1
UNIPROTKB|F1S9I5 - symbol:HLX "Uncharacterized protein" s... 132 8.6e-07 1
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"... 116 8.8e-07 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 116 8.8e-07 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 120 9.3e-07 1
UNIPROTKB|P17278 - symbol:HOXD4 "Homeobox protein Hox-D4"... 131 9.6e-07 1
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 140 9.7e-07 1
UNIPROTKB|F1NZJ3 - symbol:HOXD4 "Homeobox protein Hox-D4"... 131 9.9e-07 1
UNIPROTKB|F1P169 - symbol:DBX2 "Homeobox protein DBX2" sp... 115 1.2e-06 1
UNIPROTKB|Q91975 - symbol:DBX2 "Homeobox protein DBX2" sp... 115 1.2e-06 1
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 115 1.2e-06 1
ZFIN|ZDB-GENE-040718-178 - symbol:nkx6.1 "NK6 transcripti... 133 1.3e-06 1
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ... 131 1.3e-06 1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 114 1.5e-06 1
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R... 114 1.5e-06 1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"... 114 1.5e-06 1
RGD|1309690 - symbol:Hoxd4 "homeo box D4" species:10116 "... 121 1.6e-06 2
ZFIN|ZDB-GENE-990415-117 - symbol:hoxd11a "homeo box D11a... 131 1.7e-06 1
UNIPROTKB|P09016 - symbol:HOXD4 "Homeobox protein Hox-D4"... 121 1.7e-06 2
ZFIN|ZDB-GENE-030131-5304 - symbol:hlx1 "H2.0-like homeo ... 133 1.7e-06 1
UNIPROTKB|F1NMY3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 129 1.9e-06 1
WB|WBGene00000450 - symbol:ceh-28 species:6239 "Caenorhab... 126 1.9e-06 1
UNIPROTKB|G5EE18 - symbol:ceh-28 "NK-2 family homeodomain... 126 1.9e-06 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 113 1.9e-06 1
UNIPROTKB|E2RQ19 - symbol:HOXB8 "Uncharacterized protein"... 129 1.9e-06 1
UNIPROTKB|I3L3R1 - symbol:HOXB8 "Homeobox B8, isoform CRA... 129 1.9e-06 1
UNIPROTKB|P17481 - symbol:HOXB8 "Homeobox protein Hox-B8"... 129 2.0e-06 1
UNIPROTKB|F1P2W4 - symbol:NKX6-2 "Uncharacterized protein... 129 2.2e-06 1
ZFIN|ZDB-GENE-070626-1 - symbol:nkx6.2 "NK6 transcription... 130 2.3e-06 1
FB|FBgn0040318 - symbol:HGTX "HGTX" species:7227 "Drosoph... 135 2.4e-06 1
UNIPROTKB|P13544 - symbol:HOXD1 "Homeobox protein Hox-D1"... 112 2.5e-06 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 136 2.5e-06 1
MGI|MGI:96189 - symbol:Hoxb8 "homeobox B8" species:10090 ... 128 2.6e-06 1
UNIPROTKB|G3V6Y1 - symbol:Hoxb8 "Homeo box B8 (Mapped)" s... 128 2.6e-06 1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 129 2.8e-06 1
UNIPROTKB|A8MTQ0 - symbol:NOTO "Homeobox protein notochor... 128 2.9e-06 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 135 2.9e-06 1
ZFIN|ZDB-GENE-030328-42 - symbol:pnx "posterior neuron-sp... 122 2.9e-06 1
UNIPROTKB|F1NXB2 - symbol:HHEX "Hematopoietically-express... 129 2.9e-06 1
UNIPROTKB|Q05502 - symbol:HHEX "Hematopoietically-express... 129 2.9e-06 1
UNIPROTKB|F1RWG3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 128 3.0e-06 1
UNIPROTKB|F1NNJ9 - symbol:NKX6-2 "Uncharacterized protein... 129 3.0e-06 1
UNIPROTKB|Q60554 - symbol:NKX6-1 "Homeobox protein Nkx-6.... 131 3.1e-06 1
UNIPROTKB|F1NES3 - symbol:HHEX "Hematopoietically-express... 129 3.2e-06 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 111 3.2e-06 1
WARNING: Descriptions of 530 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 505 (182.8 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 113/196 (57%), Positives = 137/196 (69%)
Query: 1 MMKRSMSFSGVNDKCHEDHHVHGDED-LSDDGSQ--VGEKKKRLNLEQVKALEKSFELGN 57
MM RSMS V EDH+ DE+ LSDDG+ +GEKKKRL LEQVKALEKSFELGN
Sbjct: 52 MMNRSMSLMNVQ----EDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGN 107
Query: 58 KLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQA 117
KLEPERK+QLA+ALG+QPRQIAIWFQNRRARWKT+QLE+DY+ LKKQFE+LK+DN SL A
Sbjct: 108 KLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLA 167
Query: 118 QNKKLHAELVSLKNKDSNNGQVIHLKKENEXXXXXXXXXXXXXXXXXXRTQVITSPVSSS 177
NKKL AE+++LKNK+ N G ++ + E R + IT+ V+
Sbjct: 168 YNKKLLAEVMALKNKECNEGNIVKREAEASWSNNGSTENSSDINLEMPR-ETITTHVN-- 224
Query: 178 HLTSKQLFPTSTRPAA 193
T K LFP+S R +A
Sbjct: 225 --TIKDLFPSSIRSSA 238
Score = 101 (40.6 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 215 DHHQMVQ-VQDESFCHMFNGIEEQQATASSFWQW--PGQQNFH 254
DHHQ + VQ+ES C+MFNGI+E T + +W W P + H
Sbjct: 242 DHHQNHEIVQEESLCNMFNGIDE--TTPAGYWAWSDPNHNHHH 282
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 113/238 (47%), Positives = 148/238 (62%)
Query: 19 HHVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQI 78
++++G+ED SDDGSQ+GEKK+RLN+EQVK LEK+FELGNKLEPERK+QLARALGLQPRQI
Sbjct: 67 NNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQI 126
Query: 79 AIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNKDSNNGQ 138
AIWFQNRRARWKTKQLEKDY+ LK+QF+ LKA+ND LQ N+KL AE++ LKN++
Sbjct: 127 AIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTES- 185
Query: 139 VIHLKKENEXXXXXXXXXXXXXXXXXXRTQVITSPVSS-SHLTSKQLFPTSTRPAAGSMT 197
I+L KE E R + T+P S+ S LT P T
Sbjct: 186 -INLNKETEGSCSNRSDNSSDNL----RLDISTAPPSNDSTLTGGHPPPPQTVGRHFFPP 240
Query: 198 QLLQGSSIPDHLQCLKIDHHQMVQVQDE-SFCHMFNGIEEQQATASSFWQWPGQQNFH 254
++ +Q + V++E S +MF +++ S FW W QQ ++
Sbjct: 241 SPATATTTTTTMQFFQNSSSGQSMVKEENSISNMFCAMDDH----SGFWPWLDQQQYN 294
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 118/213 (55%), Positives = 138/213 (64%)
Query: 1 MMKRSMSFSGVNDKCH------------EDHHVHGDED-LSDDGSQV--GEKKKRLNLEQ 45
MM RSMSF+GV+D H D G+ED LSDDGS + GEKKKRLNLEQ
Sbjct: 64 MMNRSMSFTGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQ 123
Query: 46 VKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQF 105
V+ALEKSFELGNKLEPERK+QLA+ALGLQPRQIAIWFQNRRARWKTKQLE+DY+ LKKQF
Sbjct: 124 VRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQF 183
Query: 106 EALKADNDSLQAQNKKLHAELVSLKNKDSNNGQVIHLKKENEXXXXXXXXXXXXXXXXXX 165
+ LK+DNDSL A NKKLHAELV+LK D I K+E
Sbjct: 184 DVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKI--KRE--------FAEASWSNNGST 233
Query: 166 RTQVITSPVSSSHLTS-KQLFPTSTRPAAGSMT 197
+ ++H++ K LFP+S R A + T
Sbjct: 234 ENNHNNNSSDANHVSMIKDLFPSSIRSATATTT 266
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 91/145 (62%), Positives = 119/145 (82%)
Query: 3 KRSMSFSGVNDKCHEDHHVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPE 62
KRS + V C+ D ++GDE+ SDDGS++GEKK+RLN+EQ+KALEK FELGNKLE +
Sbjct: 40 KRS-PMNNVQGFCNLD--MNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESD 96
Query: 63 RKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKL 122
RKL+LARALGLQPRQIAIWFQNRRAR KTKQLEKDY++LK+QFE+L+ +N+ LQ QN+KL
Sbjct: 97 RKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKL 156
Query: 123 HAELVSLKNKDSNNGQVIHLKKENE 147
A++++LK+++ I+L KE E
Sbjct: 157 QAQVMALKSREPIES--INLNKETE 179
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 75/131 (57%), Positives = 90/131 (68%)
Query: 8 FSGVNDKCHEDHHVHGDEDLSDDG------SQVGEKKKRLNLEQVKALEKSFELGNKLEP 61
+SG D + D L D G S EKK+RL +EQVKALEK+FE+ NKLEP
Sbjct: 37 YSGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEP 96
Query: 62 ERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKK 121
ERK++LA+ LGLQPRQ+AIWFQNRRARWKTKQLE+DY VLK F+ALK + DSLQ N
Sbjct: 97 ERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDS 156
Query: 122 LHAELVSLKNK 132
L ++ LK K
Sbjct: 157 LLGQIKELKAK 167
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 69/116 (59%), Positives = 91/116 (78%)
Query: 24 DEDLSDDGSQVG--EKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIW 81
+E + ++ VG EKK+RL++ QVKALEK+FEL NKLEPERK++LA+ LGLQPRQ+A+W
Sbjct: 47 EEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVW 106
Query: 82 FQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
FQNRRARWKTKQLEKDY VLK Q+++L+ + DSL+ N+ L E+ LK K + G
Sbjct: 107 FQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGG 162
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 67/109 (61%), Positives = 83/109 (76%)
Query: 24 DEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQ 83
D+D DD Q+ EKK+RL EQV LEKSFE NKLEPERK QLA+ LGLQPRQ+A+WFQ
Sbjct: 57 DDDFYDD--QLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQ 114
Query: 84 NRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNK 132
NRRARWKTKQLE+DY++LK ++ L ++ DS+ N KL +E+ SL K
Sbjct: 115 NRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEK 163
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 71/123 (57%), Positives = 92/123 (74%)
Query: 25 EDLSDDGSQVG--EKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWF 82
E+ S + +G EKK+RL ++QVKALEK+FEL NKLEPERK +LA+ LGLQPRQ+A+WF
Sbjct: 45 EEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWF 104
Query: 83 QNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNK-----DSNNG 137
QNRRARWKTKQLEKDY VLK Q+++L+ + DSL+ N L E+ +K K D+NN
Sbjct: 105 QNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNN 164
Query: 138 QVI 140
+ I
Sbjct: 165 KAI 167
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 49/101 (48%), Positives = 72/101 (71%)
Query: 38 KKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
++R + EQ+K+LE FE +LEP +K+QLAR LGLQPRQ+AIWFQN+RARWK+KQLE +
Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92
Query: 98 YEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNKDSNNGQ 138
Y +L++ ++ L + +SL+ + + L +EL LK Q
Sbjct: 93 YNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQ 133
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/96 (52%), Positives = 70/96 (72%)
Query: 38 KKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
+KR + EQ+K+LE FE +LEP +K+Q+AR LGLQPRQ+AIWFQN+RARWKTKQLEK+
Sbjct: 31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKE 90
Query: 98 YEVLK-------KQFEALKADNDSLQAQNKKLHAEL 126
Y L+ QFE +K + SL ++ ++L+ E+
Sbjct: 91 YNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEM 126
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/90 (52%), Positives = 67/90 (74%)
Query: 37 KKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
KKKRL Q+ +LE+SF+ KL+ +RK++L+R LGLQPRQIA+WFQNRRARWK KQLE+
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 97 DYEVLKKQFEALKADNDSLQAQNKKLHAEL 126
Y+ L+++++ + + L + KKL A L
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALL 166
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 55/124 (44%), Positives = 81/124 (65%)
Query: 22 HGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFE----LGN----KLEPERKLQLARALGL 73
+G+E S +G + +KKK++ EQ+K LE+SF+ L KL P+RK++L++ LGL
Sbjct: 58 YGEESNSFNGQE--KKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGL 115
Query: 74 QPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQA---QNKKLHAELVSLK 130
QPRQIA+WFQNR+ARWK KQLE YE L+++F+ + + + LQ Q K + E S K
Sbjct: 116 QPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIREDSSCK 175
Query: 131 NKDS 134
K +
Sbjct: 176 KKQT 179
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 48/106 (45%), Positives = 68/106 (64%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
+ + SQ KKKRL +QV+ LEK F + KLEP+ KLQL+ LGL RQ+A+WFQN+R
Sbjct: 1 MENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKR 60
Query: 87 ARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNK 132
AR+KT+ LE + L+ + EA +D L+ Q + L EL +N+
Sbjct: 61 ARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQ 106
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 46/103 (44%), Positives = 67/103 (65%)
Query: 27 LSDDGSQVGE---KKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQ 83
++++G G +K++L+ EQV+ LE SFE +KLE ERK +LA LGL PRQ+A+WFQ
Sbjct: 48 VAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQ 107
Query: 84 NRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAEL 126
NRRARWK K++E +Y LK +E + L ++ L +L
Sbjct: 108 NRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQL 150
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 47/99 (47%), Positives = 64/99 (64%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S DG +K++L EQV LE SF +KLE ERK +LA LGL PRQ+A+WFQNRRA
Sbjct: 46 SADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRA 105
Query: 88 RWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAEL 126
RWK K+LE++Y LK + + D L+++ +L +L
Sbjct: 106 RWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQL 144
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 46/103 (44%), Positives = 67/103 (65%)
Query: 24 DEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQ 83
+ED+++ G + +K++L EQV LE SF +KLE RK ++A LGL PRQ+A+WFQ
Sbjct: 60 EEDVAEIGGML--RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQ 117
Query: 84 NRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAEL 126
NRRARWK K+LE++Y LK + + L++Q KL +L
Sbjct: 118 NRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQL 160
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 49/102 (48%), Positives = 64/102 (62%)
Query: 24 DEDLS-DDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWF 82
DE+ S DDGS KK RL EQ + LE SF + L P++K LA+ L L+PRQI +WF
Sbjct: 125 DEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWF 184
Query: 83 QNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
QNRRAR K KQ E + E LK+ F +L +N L + ++L A
Sbjct: 185 QNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRA 226
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 47/112 (41%), Positives = 66/112 (58%)
Query: 12 NDKCHEDH-HVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARA 70
+D+ D + G D +DG + KK RL+ +Q LE++F+ N L P++KL LA+
Sbjct: 104 HDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKK 163
Query: 71 LGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKL 122
L L RQ+ +WFQNRRAR K KQ E D E LK+ E L +N LQ + +L
Sbjct: 164 LNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMEL 215
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 46/101 (45%), Positives = 63/101 (62%)
Query: 24 DEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQ 83
DED S +G KK RL+ EQ LE++F+ + L P++K+ LA+ L L+ RQ+ +WFQ
Sbjct: 149 DEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQ 208
Query: 84 NRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
NRRAR K KQ E D E LK+ E L +N LQ + +L A
Sbjct: 209 NRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRA 249
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 46/101 (45%), Positives = 62/101 (61%)
Query: 24 DEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQ 83
DE+ D G + KK RL+ +Q LE +F+ N L P++KL LA+ LGL RQ+ +WFQ
Sbjct: 123 DEE-EDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQ 181
Query: 84 NRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
NRRAR K KQ E D E LK+ E L +N L+ + +L A
Sbjct: 182 NRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRA 222
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 207 (77.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 47/112 (41%), Positives = 69/112 (61%)
Query: 11 VNDKCHEDHHVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARA 70
++D+ +ED +DD + KK RL+ +Q LE SF+ + L P++K+ LA+
Sbjct: 165 IDDEVERSASRASNED-NDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQ 223
Query: 71 LGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKL 122
L L+PRQ+ +WFQNRRAR K KQ E D E LK+ E+L +N LQ + K+L
Sbjct: 224 LNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKEL 275
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 48/100 (48%), Positives = 61/100 (61%)
Query: 26 DLSDDGSQVGEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQN 84
D DD V +KK RL +Q LE +F+L + L P++K LAR L L+PRQ+ +WFQN
Sbjct: 114 DDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQN 173
Query: 85 RRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
RRAR K KQ E D E LKK E L +N LQ + + L A
Sbjct: 174 RRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKA 213
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 48/119 (40%), Positives = 69/119 (57%)
Query: 7 SFSGVNDKCHEDHHVHGDEDLSDDGSQVGEKKK-RLNLEQVKALEKSFELGNKLEPERKL 65
S +G + ED G +SDD +KK RL+ +Q LE++F+ + L P++K
Sbjct: 98 SSTGKRSEREEDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQ 157
Query: 66 QLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
LA+ LGL+ RQ+ +WFQNRRAR K KQ E D E L++ E L +N LQ + +L A
Sbjct: 158 ALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRA 216
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 200 (75.5 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 45/103 (43%), Positives = 64/103 (62%)
Query: 23 GDEDLSDDGSQVGEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIW 81
G D D G+ G +KK RL+ +Q LE++F+ + L P++KL LA+ L L+ RQ+ +W
Sbjct: 148 GGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVW 207
Query: 82 FQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
FQNRRAR K KQ E D E LK+ + L +N LQ + +L A
Sbjct: 208 FQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRA 250
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 45/98 (45%), Positives = 61/98 (62%)
Query: 26 DLSDDGSQVGEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQN 84
D +D + +KK RL +Q LE+SF+ + L P++K LAR L L+PRQ+ +WFQN
Sbjct: 101 DYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQN 160
Query: 85 RRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKL 122
RRAR K KQ E D E LKK E L +N LQ + ++L
Sbjct: 161 RRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQEL 198
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 46/103 (44%), Positives = 61/103 (59%)
Query: 22 HGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIW 81
H +ED S+ G + KK RL EQ LE+SF + L P++K LA L L RQ+ +W
Sbjct: 55 HVNEDDSNSGGR-RRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVW 113
Query: 82 FQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
FQNRRAR K K E + E LK+ F +LK N LQ + ++L A
Sbjct: 114 FQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRA 156
>FB|FBgn0034520 [details] [associations]
symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
[GO:0007526 "larval somatic muscle development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
Uniprot:A1ZBV6
Length = 411
Score = 167 (63.8 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 43/111 (38%), Positives = 58/111 (52%)
Query: 5 SMSFSGVNDKCHEDHHVHGDEDL---SDDGSQVGE-KKKR----LNLEQVKALEKSFELG 56
S + S C +D+ G D+ SDDG+ +G+ +KKR + Q+KALE FE G
Sbjct: 82 SRASSPATSSCLDDNMDDGKSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERG 141
Query: 57 NKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEA 107
L ++ LA+ L L QI IWFQNRR +WK K D E L + A
Sbjct: 142 KYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTS-DVETLASHYYA 191
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 156 (60.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 38/93 (40%), Positives = 56/93 (60%)
Query: 30 DGSQVGEKKKRLN---LEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
DGS+ KKKR + +Q++ LE SF+ + +++ QL+R LGL PRQI WFQNRR
Sbjct: 25 DGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRR 84
Query: 87 ARWKTKQLEKDYEVLKKQFEALKADNDSLQAQN 119
QL+ +E + ALKA+ND ++ +N
Sbjct: 85 T-----QLKAQHE--RADNSALKAENDKIRCEN 110
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 133 (51.9 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 58
Query: 105 FEALKADNDSLQAQNKKLHAELVS---LKNKDSNNGQV 139
F + K + + L+ Q + E + D NG V
Sbjct: 59 FPSSKCEQEELEKQKLERAPEAADEGDAQKGDKKNGSV 96
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 129 (50.5 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 17 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 75
Query: 87 ARWKTKQLEKDYEVLKK---QFEALK--ADNDSLQAQNKKL 122
+W+ + + KK + E LK +DN+ NK L
Sbjct: 76 TKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDDEYNKPL 116
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 129 (50.5 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R EQ ALE F+ L P+ + +LA++L L RQ+ WFQNRRA+W+ ++ KD E
Sbjct: 82 RFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWR--RVRKDGE 139
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 128 (50.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD-YEVLK- 102
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD + K
Sbjct: 86 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKDKFPASKQ 144
Query: 103 --KQFEALKADNDSLQAQNKKLH 123
K+ EA K +D L+ + H
Sbjct: 145 EGKEGEAKKETHD-LEDDRAESH 166
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 128 (50.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD-YEVLK- 102
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD + K
Sbjct: 66 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKDKFPASKQ 124
Query: 103 --KQFEALKADNDSLQAQNKKLH 123
K+ EA K +D L+ + H
Sbjct: 125 EGKEGEAKKETHD-LEDDRAESH 146
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 125 (49.1 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 74
Query: 105 FEALKADNDSLQAQ 118
F + K + + L+ +
Sbjct: 75 FPSSKCEQEELEKE 88
>UNIPROTKB|F8VWZ5 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
"positive regulation of organ growth" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
Uniprot:F8VWZ5
Length = 151
Score = 124 (48.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 18 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 75
Query: 96 KDYEVLKKQFE-ALKADNDSLQAQNKKLHAELVSLKNKDSNN 136
KD E +K A AD + + + E S ++ DS +
Sbjct: 76 KDKEAGEKPSGGAPAADGEQDERSPSRSEGEAES-ESSDSES 116
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 123 (48.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 123 (48.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 122 (48.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 29 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 88
Query: 88 RWK 90
+WK
Sbjct: 89 KWK 91
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 137 (53.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 202
Query: 100 VLKKQFEALKADNDSLQAQN 119
K++ E+L DN Q Q+
Sbjct: 203 NKKEELESL--DNSCDQRQD 220
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 137 (53.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202
Query: 100 VLKKQFEALKADNDSLQ 116
K++ E+L + D Q
Sbjct: 203 NKKEELESLDSSCDQRQ 219
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 137 (53.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 204
Query: 100 VLKKQFEALKADNDSLQAQN 119
K++ E+L DN Q Q+
Sbjct: 205 NKKEELESL--DNSCDQRQD 222
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 120 (47.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A +L L RQI IWFQNRR +WK
Sbjct: 7 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 120 (47.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 31 GSQVGEKKKR---LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
GS G+ ++R EQ+ LEK F L + Q+A AL L Q+ IWFQNRRA
Sbjct: 18 GSGAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA 77
Query: 88 RWK 90
+WK
Sbjct: 78 KWK 80
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 120 (47.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
+QV LEK F L R++++A +L L RQI IWFQNRR +WK
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 120 (47.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
+QV LEK F L R++++A +L L RQI IWFQNRR +WK
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 136 (52.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 100 VLKKQFEALKADNDSLQAQN 119
K++ E+L DN Q Q+
Sbjct: 204 NKKEELESL--DNPCDQRQD 221
>UNIPROTKB|F1MZR4 [details] [associations]
symbol:LOC516179 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0045687 "positive regulation of glial cell differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0022010 "central nervous system
myelination" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0010455
"positive regulation of cell fate commitment" evidence=IEA]
[GO:0010454 "negative regulation of cell fate commitment"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0050885 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0022010 GO:GO:0031018 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 GO:GO:0021912
EMBL:DAAA02046415 IPI:IPI00838790 Ensembl:ENSBTAT00000045009
OMA:WDDEKIT Uniprot:F1MZR4
Length = 151
Score = 119 (46.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 18 LDKDGKKK-HSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 76
Query: 87 ARWKTKQLEKDYEVLKKQ 104
+W+ + + KKQ
Sbjct: 77 TKWRKRHAAEMASAKKKQ 94
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 119 (46.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
Q LEK F+ L +R ++++ ALGL RQI IWFQNRR +WK ++
Sbjct: 18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 133 (51.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPPS 182
Query: 100 VLKKQFEALKADNDSLQAQNKKLHA-ELVSLKNKDSNNGQVIHLKKENE 147
K++ E D+D+ + + A EL S + DS +++ ++ E++
Sbjct: 183 TGKREAE----DSDTRRLSDAAARARELESGASTDSE--ELLDIEDEHQ 225
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 128 (50.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD-YEVLK- 102
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD + K
Sbjct: 106 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKDKFPASKQ 164
Query: 103 --KQFEALKADNDSLQAQNKKLH 123
K+ EA K +D L+ + H
Sbjct: 165 EGKEGEAKKETHD-LEDDRAESH 186
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 118 (46.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
Q LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 18 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 121 (47.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 154 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 213
Score = 48 (22.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 187 TSTRPAAGSMTQLLQGSSIP-DHLQCLKIDHH 217
T R ++ S + S+ P HLQ L DHH
Sbjct: 221 TKGRSSSSSSSSSCSSSTAPGQHLQPLAKDHH 252
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 134 (52.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 202
Query: 100 VLKKQFEALKADNDSLQAQNKKLHAE 125
K + E+L +N ++Q + L AE
Sbjct: 203 NKKDETESL--ENICEESQERCLSAE 226
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 117 (46.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 37 KKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQL 94
+KKR Q++ LE+ F + E++LQL+R L L RQ+ IWFQNRR K K+L
Sbjct: 38 RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM--KEKKL 95
Query: 95 EKD 97
+D
Sbjct: 96 NRD 98
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 141 (54.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 37/118 (31%), Positives = 68/118 (57%)
Query: 3 KRSMSFSGVNDKCHEDHH--VHGDE-DLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKL 59
++S V + D+ V GD+ D SD + ++ R +Q++ LE F+
Sbjct: 76 RKSSRGEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHP 135
Query: 60 EPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK-DYEVLKKQFEALKADNDSLQ 116
+ +++L L+R L L PRQ+ WFQNRR + KT Q+E+ + +L+++ + L+A+N S++
Sbjct: 136 DEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKT-QIERHENALLRQENDKLRAENMSVR 192
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 134 (52.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 204
Query: 100 VLKKQFEALKADNDSLQAQNKKLHAE 125
K + E+L +N ++Q + L AE
Sbjct: 205 NKKDETESL--ENICEESQERCLSAE 228
>UNIPROTKB|F1S9I5 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IEA] [GO:0045629 "negative
regulation of T-helper 2 cell differentiation" evidence=IEA]
[GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 OMA:ESTQAPL
EMBL:CU855622 Ensembl:ENSSSCT00000011848 Uniprot:F1S9I5
Length = 245
Score = 132 (51.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 39/102 (38%), Positives = 59/102 (57%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 43 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 100
Query: 96 KDYEVLKKQFE-ALKADNDSLQAQNKKLHAELVSLKNKDSNN 136
KD E +K A+ AD + + + AE S ++ DS +
Sbjct: 101 KDKEAGEKPSGGAVAADGEPEERSPSRSEAEAES-ESSDSES 141
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 116 (45.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
Q LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 78 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 123
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 116 (45.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 37 KKKRLNL--EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQL 94
KK R +QV LEK FE L + +LA+ L + Q+ IWFQNRR +WK +
Sbjct: 71 KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIES 130
Query: 95 EKD 97
EK+
Sbjct: 131 EKE 133
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 120 (47.3 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 22/65 (33%), Positives = 46/65 (70%)
Query: 33 QVGEKKKRL-NLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKT 91
Q+ +K + L +Q++ LEK F+ + + +++ ++A+ +G+ P++I +WFQNRRA+W+
Sbjct: 59 QIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR- 117
Query: 92 KQLEK 96
++EK
Sbjct: 118 -KMEK 121
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 131 (51.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 34/100 (34%), Positives = 48/100 (48%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 141 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
Query: 91 TKQLEKDYEVLK-KQFEALKADNDSLQAQNKKLHAELVSL 129
KD+++ K + A N LQ K +L +L
Sbjct: 201 -----KDHKLPNTKGRSSSSASNPHLQTVPKDHQTDLTTL 235
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 140 (54.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 19 HHVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARAL----GLQ 74
HH D D D G G K R EQV+ALE+ + K R+ QL R ++
Sbjct: 4 HHSMDDRDSPDKGFDSG-KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIE 62
Query: 75 PRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEA----LKADNDSLQAQNKKLHAELVSLK 130
PRQI +WFQNRR R K ++ + + ++ A L +ND LQ Q L E +K
Sbjct: 63 PRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMK 122
Query: 131 NK 132
++
Sbjct: 123 HR 124
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 131 (51.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 34/100 (34%), Positives = 48/100 (48%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 143 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 202
Query: 91 TKQLEKDYEVLK-KQFEALKADNDSLQAQNKKLHAELVSL 129
KD+++ K + A N LQ K +L +L
Sbjct: 203 -----KDHKLPNTKGRSSSSASNPHLQTVPKDHQTDLTTL 237
>UNIPROTKB|F1P169 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
ArrayExpress:F1P169 Uniprot:F1P169
Length = 156
Score = 115 (45.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK 103
+Q KALEK F+ + + +LA LGL+ Q+ IWFQNRR +W+ K+ EVL
Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 75
Query: 104 QF--EALKADNDSLQAQN 119
+ E L+ + S A N
Sbjct: 76 RCLQEGLQENYLSQSAMN 93
>UNIPROTKB|Q91975 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
Uniprot:Q91975
Length = 157
Score = 115 (45.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK 103
+Q KALEK F+ + + +LA LGL+ Q+ IWFQNRR +W+ K+ EVL
Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 75
Query: 104 QF--EALKADNDSLQAQN 119
+ E L+ + S A N
Sbjct: 76 RCLQEGLQENYLSQSAMN 93
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 115 (45.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 25 EDLSDDGSQVGEKKKR--LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWF 82
E+L D ++ +K+ R NL+Q++ LE F + L +++ QLA L L Q+ IWF
Sbjct: 20 EELQD--TERPQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWF 77
Query: 83 QNRRARWKTKQ---LEKDYEVLKKQFEALKADNDSLQAQN 119
QNRR +++ +Q L V Q E + ++S+Q ++
Sbjct: 78 QNRRVKYQKQQRLKLPAVSAVAAPQDEPSSSSDNSIQRED 117
>ZFIN|ZDB-GENE-040718-178 [details] [associations]
symbol:nkx6.1 "NK6 transcription factor related,
locus 1 (Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0045165
"cell fate commitment" evidence=IMP] [GO:0003310 "pancreatic A cell
differentiation" evidence=IGI;IMP] [GO:0003309 "type B pancreatic
cell differentiation" evidence=IGI;IMP] [GO:0031018 "endocrine
pancreas development" evidence=IGI;IMP] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IGI;IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-040718-178 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0021522 GO:GO:0000976 GO:GO:0045165 GO:GO:0003310
GO:GO:0003309 HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030
EMBL:BC076337 IPI:IPI00997948 RefSeq:NP_001002475.1
UniGene:Dr.79658 ProteinModelPortal:Q6DGK5 SMR:Q6DGK5 GeneID:436748
KEGG:dre:436748 CTD:436748 InParanoid:Q6DGK5 NextBio:20831186
Uniprot:Q6DGK5
Length = 312
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 22 HGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIW 81
H + L D + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +W
Sbjct: 174 HQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVW 233
Query: 82 FQNRRARWKTKQLEKDYEVLKKQ---FEALK--ADN-DSLQAQNKKLHA----ELVS--L 129
FQNRR +W+ + + KKQ E LK ++N D NK L E ++ L
Sbjct: 234 FQNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLDPNSDDEKITQLL 293
Query: 130 KNKDSNNGQVIHLKKENE 147
K N+ +IH ENE
Sbjct: 294 KKHKPNSALIIHTS-ENE 310
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK 103
+QV LEK F L R++++A L L RQI IWFQNRR +WK KD+++
Sbjct: 176 QQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK-----KDHKLPNT 230
Query: 104 QFEALKADNDSLQAQNKKLHAELVSL 129
+ + N Q K E+ +L
Sbjct: 231 KGRSASVGNQHAQHAQKDSQTEITTL 256
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 114 (45.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
Q LEK F L R++++A +L L RQI IWFQNRR +WK
Sbjct: 18 QTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK 63
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 114 (45.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R +++A AL L RQI IWFQNRR +WK + ++
Sbjct: 16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 67
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 114 (45.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R +++A AL L RQI IWFQNRR +WK + ++
Sbjct: 16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 67
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 121 (47.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 149 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
Score = 43 (20.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 188 STRPAAGSMTQLLQGSSIPD-HLQCLKIDHH 217
+T+ + S + S+ P HLQ + DHH
Sbjct: 215 NTKGRSSSSSSSCSSSAAPSQHLQPMAKDHH 245
>ZFIN|ZDB-GENE-990415-117 [details] [associations]
symbol:hoxd11a "homeo box D11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-117 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231898
HOVERGEN:HBG052048 KO:K09296 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X GeneTree:ENSGT00700000104263 eggNOG:NOG305087
EMBL:BC114271 EMBL:X87751 EMBL:DQ069272 EMBL:Y14543 IPI:IPI00934960
RefSeq:NP_571242.1 UniGene:Dr.47548 ProteinModelPortal:Q90470
SMR:Q90470 Ensembl:ENSDART00000082344 GeneID:30405 KEGG:dre:30405
CTD:30405 NextBio:20806815 ArrayExpress:Q90470 Bgee:Q90470
Uniprot:Q90470
Length = 276
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 13 DKCHEDHHVHG-DEDLSDDGSQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLAR 69
D E+ V DE+ + S +KKR Q++ LE+ F + E++LQL+R
Sbjct: 180 DTVEEESSVSTCDEEKNSGSSATKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSR 239
Query: 70 ALGLQPRQIAIWFQNRRARWKTKQLEKD 97
L L RQ+ IWFQNRR K K+L +D
Sbjct: 240 MLSLTDRQVKIWFQNRRM--KEKKLNRD 265
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 121 (47.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 151 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 210
Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 187 TSTRPAAGSMTQLLQGSSIPD-HLQCLKIDHH 217
T R ++ S + S P HLQ + DHH
Sbjct: 218 TKGRSSSSSSSSSCSSSVAPSQHLQPMAKDHH 249
>ZFIN|ZDB-GENE-030131-5304 [details] [associations]
symbol:hlx1 "H2.0-like homeo box 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-5304 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 eggNOG:NOG331357
HOGENOM:HOG000112911 HOVERGEN:HBG000457 OrthoDB:EOG473PRM
EMBL:CU633978 IPI:IPI00510547 Ensembl:ENSDART00000131806
OMA:CIADILQ Uniprot:B8JMG3
Length = 356
Score = 133 (51.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARW---KTKQLEKD 97
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W K Q +KD
Sbjct: 217 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 274
Query: 98 YEVLKKQFEALKADNDSLQAQNKKLHAE 125
E K+Q + A+ + + + + E
Sbjct: 275 KE--KEQPDKSAAETEQKERDDSECETE 300
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 129 (50.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 155 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 207
Query: 105 FEALKADNDSLQAQNKK 121
F + K + + L+ Q ++
Sbjct: 208 FPSSKCEQEELEKQMER 224
>WB|WBGene00000450 [details] [associations]
symbol:ceh-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0034243 "regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0000976 GO:GO:0050807 GO:GO:0034243
GeneTree:ENSGT00700000104129 KO:K09352 EMBL:Z77133 EMBL:AY205144
RefSeq:NP_510169.4 UniGene:Cel.11118 ProteinModelPortal:G5EE18
SMR:G5EE18 EnsemblMetazoa:K03A11.3 GeneID:191619
KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3 OMA:NPMFASA
NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 126 (49.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 12 NDKCHEDHHVHGDEDLSDDGSQVGEKKKRL--NLEQVKALEKSFELGNKLEPERKLQLAR 69
N + +++H H + D + SQ ++K R+ QV LE+ F+ + + +LA+
Sbjct: 80 NQRSYQNHRQHSNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQ 139
Query: 70 ALGLQPRQIAIWFQNRRARWKTKQLEKD 97
LGL Q+ IWFQNRR +K K+L +D
Sbjct: 140 CLGLTATQVKIWFQNRR--YKCKRLAQD 165
>UNIPROTKB|G5EE18 [details] [associations]
symbol:ceh-28 "NK-2 family homeodomain protein CEH-28"
species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0000976
GO:GO:0050807 GO:GO:0034243 GeneTree:ENSGT00700000104129 KO:K09352
EMBL:Z77133 EMBL:AY205144 RefSeq:NP_510169.4 UniGene:Cel.11118
ProteinModelPortal:G5EE18 SMR:G5EE18 EnsemblMetazoa:K03A11.3
GeneID:191619 KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3
OMA:NPMFASA NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 126 (49.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 12 NDKCHEDHHVHGDEDLSDDGSQVGEKKKRL--NLEQVKALEKSFELGNKLEPERKLQLAR 69
N + +++H H + D + SQ ++K R+ QV LE+ F+ + + +LA+
Sbjct: 80 NQRSYQNHRQHSNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQ 139
Query: 70 ALGLQPRQIAIWFQNRRARWKTKQLEKD 97
LGL Q+ IWFQNRR +K K+L +D
Sbjct: 140 CLGLTATQVKIWFQNRR--YKCKRLAQD 165
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 113 (44.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 30 DGSQVGEKKKR-LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRAR 88
+GS K++ EQ++ LE F N L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 51 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 110
Query: 89 WK 90
WK
Sbjct: 111 WK 112
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 129 (50.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 156 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 208
Query: 105 FEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
F + K + + L+ Q KL + D+ G
Sbjct: 209 FPSSKCEQEELEKQ--KLERAPEAADEGDAQKG 239
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 129 (50.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 156 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 208
Query: 105 FEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
F + K + + L+ Q KL + D+ G
Sbjct: 209 FPSSKCEQEELEKQ--KLERAPEAADEGDAQKG 239
>UNIPROTKB|P17481 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007625 "grooming
behavior" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0019233 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0045638 GO:GO:0021516
HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V EMBL:AY014294
EMBL:AY014293 EMBL:X16173 IPI:IPI00014536 PIR:B37042
RefSeq:NP_076921.1 UniGene:Hs.514292 ProteinModelPortal:P17481
SMR:P17481 STRING:P17481 PhosphoSite:P17481 DMDM:20141506
PRIDE:P17481 DNASU:3218 Ensembl:ENST00000239144 GeneID:3218
KEGG:hsa:3218 UCSC:uc002inw.3 CTD:3218 GeneCards:GC17M046688
HGNC:HGNC:5119 MIM:142963 neXtProt:NX_P17481 PharmGKB:PA29395
InParanoid:P17481 KO:K09308 OMA:MERAQEV GenomeRNAi:3218
NextBio:12804 Bgee:P17481 CleanEx:HS_HOXB8 Genevestigator:P17481
GermOnline:ENSG00000120068 Uniprot:P17481
Length = 243
Score = 129 (50.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 209
Query: 105 FEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
F + K + + L+ Q KL + D+ G
Sbjct: 210 FPSSKCEQEELEKQ--KLERAPEAADEGDAQKG 240
>UNIPROTKB|F1P2W4 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:AADN02047157
EMBL:AADN02047158 IPI:IPI00822098 Ensembl:ENSGALT00000038553
Uniprot:F1P2W4
Length = 250
Score = 129 (50.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 123 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 181
Query: 87 ARWKTKQLEKDYEVLKK---QFEALK--ADNDSLQAQNKKL 122
+W+ + + KK + E LK +DN+ NK L
Sbjct: 182 TKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDDEYNKPL 222
>ZFIN|ZDB-GENE-070626-1 [details] [associations]
symbol:nkx6.2 "NK6 transcription factor related,
locus 2" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003310 "pancreatic A
cell differentiation" evidence=IGI;IMP] [GO:0003309 "type B
pancreatic cell differentiation" evidence=IGI;IMP] [GO:0031018
"endocrine pancreas development" evidence=IGI;IMP] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070626-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021522 GO:GO:0000976 GO:GO:0003310
GO:GO:0003309 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 OrthoDB:EOG4JT064 EMBL:DQ416765 IPI:IPI00511922
UniGene:Dr.15365 STRING:A3QRJ9 InParanoid:A3QRJ9 Uniprot:A3QRJ9
Length = 280
Score = 130 (50.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 145 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 203
Query: 87 ARWKTKQLEKDYEVLKK---QFEALK--ADNDSLQAQNKKL 122
+W+ + + KK + E +K +DND NK L
Sbjct: 204 TKWRKRHAAEMATAKKKHDSETEKMKESSDNDEDDEYNKPL 244
>FB|FBgn0040318 [details] [associations]
symbol:HGTX "HGTX" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IGI;IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0070491
"repressing transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:AE014296
GO:GO:0030182 GO:GO:0045944 GO:GO:0007417 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0000976 eggNOG:NOG265304 RefSeq:NP_001137954.1
UniGene:Dm.3490 ProteinModelPortal:B7Z056 SMR:B7Z056 STRING:B7Z056
GeneID:53446 KEGG:dme:Dmel_CG13475 CTD:53446 FlyBase:FBgn0040318
OMA:VHAHAMA OrthoDB:EOG447D8J PhylomeDB:B7Z056 GenomeRNAi:53446
NextBio:841198 Bgee:B7Z056 Uniprot:B7Z056
Length = 605
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 17 EDHHVHGDEDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPR 76
+ H H D DG + + + +Q+ ALEK+FE L + +LA ALG+
Sbjct: 470 QSHQHHPSND--KDGKKK-HTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSES 526
Query: 77 QIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADND 113
Q+ +WFQNRR +W+ K+ + K++ + + DND
Sbjct: 527 QVKVWFQNRRTKWR-KRHAAEMATAKRKQDDMGGDND 562
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 112 (44.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q+ LEK F L R+L++AR+L L+ Q+ +WFQNRR + K ++ E+
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 24 DEDLSDDGSQVGEKKK--RLNLEQVKALEKSF-ELGNKLEPERKLQLARALGLQPRQIAI 80
+E+L D + +KK+ R Q++ LE F E + + +RK +L+R L L+P Q+
Sbjct: 50 EEELQDPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRK-ELSRELSLEPLQVKF 108
Query: 81 WFQNRRARWKTKQLEKDYEVLKKQFEALKADND 113
WFQN+R + K + + ++LK + + L+A+N+
Sbjct: 109 WFQNKRTQMKAQHERHENQILKSENDKLRAENN 141
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 128 (50.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 209
Query: 105 FEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
F + K + + L+ + KL + + D+ G
Sbjct: 210 FPSSKCEQEELEKE--KLERAPETAEQGDAQKG 240
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 128 (50.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 209
Query: 105 FEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
F + K + + L+ + KL + + D+ G
Sbjct: 210 FPSSKCEQEELEKE--KLERAPETAEQGDAQKG 240
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 129 (50.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 100 VLKKQFEALKADNDSLQ 116
K + ++L D Q
Sbjct: 204 NKKDELDSLDTSCDQGQ 220
>UNIPROTKB|A8MTQ0 [details] [associations]
symbol:NOTO "Homeobox protein notochord" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0030903 "notochord development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0009880 GO:GO:0030903 EMBL:AC010913 EMBL:AK295936
EMBL:AK316410 IPI:IPI00247814 RefSeq:NP_001127934.1
UniGene:Hs.694384 ProteinModelPortal:A8MTQ0 SMR:A8MTQ0
STRING:A8MTQ0 PRIDE:A8MTQ0 Ensembl:ENST00000398468 GeneID:344022
KEGG:hsa:344022 UCSC:uc010yrd.2 CTD:344022 GeneCards:GC02P073429
HGNC:HGNC:31839 HPA:HPA034660 neXtProt:NX_A8MTQ0
PharmGKB:PA134895171 eggNOG:NOG311470 HOGENOM:HOG000082431
HOVERGEN:HBG108196 InParanoid:A8MTQ0 OMA:QQKRVRT OrthoDB:EOG48GW4Q
GenomeRNAi:344022 NextBio:98630 Bgee:A8MTQ0 CleanEx:HS_NOTO
Genevestigator:A8MTQ0 Uniprot:A8MTQ0
Length = 251
Score = 128 (50.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 25 EDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQN 84
EDL D Q + NLEQ++ LEK F + L +++ QLA L L Q+ +WFQN
Sbjct: 147 EDLQDTERQQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLAARLKLTENQVRVWFQN 206
Query: 85 RRARWKTKQ 93
RR +++ +Q
Sbjct: 207 RRVKYQKQQ 215
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 28 SDDGSQVGEKKKRLNLE---QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQN 84
S + + +KKKR + Q++ LE +F + +++ QL+R LGL PRQI WFQN
Sbjct: 12 SSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQN 71
Query: 85 RRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHA 124
RR + K + D LK++ + ++ +N +++ K HA
Sbjct: 72 RRTQKKAQHERADNCALKEENDKIRCENIAIREAIK--HA 109
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 122 (48.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 37 KKKRLN----LEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTK 92
K KR+ L+Q++ LE+SF+ + L + +A ALGL Q+ IWFQNRR +WK K
Sbjct: 66 KSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWK-K 124
Query: 93 QLE 95
+L+
Sbjct: 125 ELD 127
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 129 (50.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + EQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209
Query: 100 VLKKQFE 106
K++ E
Sbjct: 210 TKKEEAE 216
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 129 (50.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + EQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209
Query: 100 VLKKQFE 106
K++ E
Sbjct: 210 TKKEEAE 216
>UNIPROTKB|F1RWG3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:CU856160
Ensembl:ENSSSCT00000019091 Uniprot:F1RWG3
Length = 253
Score = 128 (50.1 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 171 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 223
Query: 105 FEALKADNDSLQAQ 118
F + K + + L+ Q
Sbjct: 224 FPSSKCEQEELEKQ 237
>UNIPROTKB|F1NNJ9 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454 CTD:84504
KO:K09350 OMA:GPAGFKA EMBL:AADN02047157 EMBL:AADN02047158
IPI:IPI00604205 RefSeq:NP_001186477.1 UniGene:Gga.2725
Ensembl:ENSGALT00000017097 GeneID:395591 KEGG:gga:395591
NextBio:20815664 Uniprot:F1NNJ9
Length = 278
Score = 129 (50.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 145 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 203
Query: 87 ARWKTKQLEKDYEVLKK---QFEALK--ADNDSLQAQNKKL 122
+W+ + + KK + E LK +DN+ NK L
Sbjct: 204 TKWRKRHAAEMASAKKKHDSETEKLKESSDNEDDDEYNKPL 244
>UNIPROTKB|Q60554 [details] [associations]
symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:10036
"Mesocricetus auratus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0051594 "detection of glucose" evidence=IDA]
[GO:0072560 "type B pancreatic cell maturation" evidence=IMP]
[GO:2000078 "positive regulation of type B pancreatic cell
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0051091 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:2000078 GO:GO:0051594
HOVERGEN:HBG070987 GO:GO:0072560 EMBL:X81409 PIR:I48188
ProteinModelPortal:Q60554 SMR:Q60554 Uniprot:Q60554
Length = 364
Score = 131 (51.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 230 LDKDGKRK-HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 288
Query: 87 ARWKTKQLEKDYEVLKKQ---FEALKADNDSLQAQ---NKKLHA-----ELVSL--KNKD 133
+W+ K + KKQ E LK +++ + NK L ++ L K+K
Sbjct: 289 TKWRKKHAAEMATAKKKQDSETERLKGTSENEEEDDDYNKPLDPNSDDEKITQLLKKHKS 348
Query: 134 SNNGQVIH 141
S+ G ++H
Sbjct: 349 SSGGLLLH 356
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 129 (50.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + EQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 159 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 218
Query: 100 VLKKQFE 106
K++ E
Sbjct: 219 TKKEEAE 225
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 111 (44.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 35 GEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
G KK+ Q LEK F L ER+L++++++ L RQ+ IWFQNRR + K
Sbjct: 21 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 80
Query: 94 LEKDYEVLKKQF 105
E L F
Sbjct: 81 RENRIRELTSNF 92
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 111 (44.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 35 GEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
G KK+ Q LEK F L ER+L++++++ L RQ+ IWFQNRR + K
Sbjct: 25 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 84
Query: 94 LEKDYEVLKKQF 105
E L F
Sbjct: 85 RENRIRELTSNF 96
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 111 (44.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
EQ+ LEK F L + Q+A AL L Q+ IWFQNRRA+WK
Sbjct: 12 EQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 58
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 111 (44.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 35/96 (36%), Positives = 46/96 (47%)
Query: 32 SQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
S+ +K+ R QV LE+ F L + LA+ L L Q+ IWFQNRR +
Sbjct: 26 SKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKT 85
Query: 90 KTKQLEKDYEVLKKQ--FEALKADNDSLQAQNKKLH 123
K KQL D L+K ALK + S QA +H
Sbjct: 86 KRKQLTSDLGDLEKHSSLPALKEEGLS-QASPISMH 120
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 121 (47.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 28 SDDGSQVGEKKKRL--NLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNR 85
S G GEK++R QV LEK F L +R++++A +L L RQ+ IWFQNR
Sbjct: 157 STTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNR 216
Query: 86 RARWKTKQLEK 96
R + K + +K
Sbjct: 217 RMKHKKENKDK 227
Score = 40 (19.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 4 RSMSFS-GVNDKCHEDHHVHGDEDLSDDGSQVG 35
+S+ ++ V H+ H+ GD+D D + G
Sbjct: 100 QSLCYNPSVTSTHHDWKHLEGDDDDDKDDDKKG 132
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 127 (49.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD +
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 209
Query: 105 FEALKADNDSLQAQNKK 121
F + K++ + ++ + ++
Sbjct: 210 FPSSKSEQEQIEKEKRE 226
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/123 (30%), Positives = 69/123 (56%)
Query: 7 SFSG-VNDKCHEDHH--------VHGDEDLSDDGSQVGEKKKRLNL---EQVKALEKSFE 54
+F G VN + E+ H V G D + +KKR + +Q++ LE F+
Sbjct: 95 TFDGSVNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFK 154
Query: 55 LGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK-DYEVLKKQFEALKADND 113
+ +++L+L++ L L+ RQ+ WFQNRR + KT QLE+ + +L+++ + L+A+N
Sbjct: 155 ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENALLRQENDKLRAENM 213
Query: 114 SLQ 116
S++
Sbjct: 214 SIR 216
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 110 (43.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 37 KKKRLNLEQVKA--LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQL 94
KK R + +V+ LEK F L + LA++L + Q+ WFQNRR +W+ +
Sbjct: 12 KKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTA 71
Query: 95 E-KDYE-------VLKKQFEAL-KADNDSLQAQNKKLH-AELVSLKN 131
E ++ E +L+ Q +A K+ N+S+Q LH + L +L+N
Sbjct: 72 EEREAERQQASRLMLQLQHDAFQKSLNESIQPDPLCLHNSSLFALQN 118
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 110 (43.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLE 95
Q+ LEK F L R+L++AR+L L+ Q+ +WFQNRR + K ++ E
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 110 (43.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 35 GEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
G KK+ Q LEK F L ER+L+++R++ L RQ+ IWFQNRR + K
Sbjct: 19 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMN 78
Query: 94 LEKDYEVLKKQF 105
E L F
Sbjct: 79 RENRIRELTANF 90
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 110 (43.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 35 GEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
G KK+ Q LEK F L ER+L+++R++ L RQ+ IWFQNRR + K
Sbjct: 20 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMN 79
Query: 94 LEKDYEVLKKQF 105
E L F
Sbjct: 80 RENRIRELTANF 91
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 122 (48.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 78 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 137
Query: 88 RWK 90
+WK
Sbjct: 138 KWK 140
>UNIPROTKB|F1NXJ0 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
Length = 160
Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK 103
+Q KALEK F+ + + +LA LGL+ Q+ IWFQNRR +W+ K+ EVL
Sbjct: 22 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNS---KEKEVLSN 78
Query: 104 QF--EALKADNDSLQAQN 119
+ E L+ + S A N
Sbjct: 79 RCLQEGLQENYLSQSAMN 96
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 112 (44.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S+ S+ +++ EQ++ LE F N L R+ ++A L L RQ+ +WFQNRR
Sbjct: 31 SEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRM 90
Query: 88 RWK 90
+WK
Sbjct: 91 KWK 93
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 121 (47.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R++++A AL L RQI IWFQNRR +WK + E+
Sbjct: 108 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 159
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 127 (49.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 34/92 (36%), Positives = 49/92 (53%)
Query: 13 DKCHEDHHVHGDEDLSDD---GSQVGEK--KKRLNLE--QVKALEKSFELGNKLEPERKL 65
++C E ++D GS G+K KKR Q++ LE+ F + E++L
Sbjct: 183 ERCEETSSPEPSSGNNEDKFSGSSNGQKTRKKRCPYTKYQIRELEREFFFSVYINKEKRL 242
Query: 66 QLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
QL+R L L RQ+ IWFQNRR K K+L +D
Sbjct: 243 QLSRMLNLTDRQVKIWFQNRRM--KEKKLNRD 272
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 109 (43.4 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRAR 88
LEK F + RK +LA ALGL RQ+ IWFQNRRA+
Sbjct: 21 LEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAK 60
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 109 (43.4 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 37 KKKRL--NLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQL 94
+KKR Q LEK F L +R+ ++AR L L RQ+ IWFQNRR K K++
Sbjct: 47 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRM--KMKKI 104
Query: 95 EKD 97
KD
Sbjct: 105 NKD 107
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 126 (49.4 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 40 RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 100 VLKKQFEALKADNDSLQAQN 119
K ++L D Q Q+
Sbjct: 204 NKKDALDSL--DTSCEQGQD 221
>ZFIN|ZDB-GENE-980526-403 [details] [associations]
symbol:nkx2.2a "NK2 transcription factor related
2a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0014044 "Schwann cell development" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0033504 "floor
plate development" evidence=IMP] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IGI] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation" evidence=IMP]
[GO:0021508 "floor plate formation" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-403 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0031018 GO:GO:0014044 GO:GO:0008347
GO:GO:0021530 GO:GO:0021508 GO:GO:0021514
GeneTree:ENSGT00700000104098 EMBL:BX927409 IPI:IPI00817820
Ensembl:ENSDART00000140549 ArrayExpress:F1QNE4 Bgee:F1QNE4
Uniprot:F1QNE4
Length = 273
Score = 126 (49.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 18 DHHVHGDEDLSDDGSQVGEKKKRLNL---EQVKALEKSFELGNKLE-PERKLQLARALGL 73
D D++ S +GS G+K+KR L Q LE+ F L PER+ LA + L
Sbjct: 110 DESPDNDKETSSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRL 168
Query: 74 QPRQIAIWFQNRRARWKTKQLEKDYEV 100
P Q+ IWFQN R + K + EK EV
Sbjct: 169 TPTQVKIWFQNHRYKMKRARAEKGMEV 195
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 125 (49.1 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 32/102 (31%), Positives = 43/102 (42%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 149 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
Query: 91 TKQL---EKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSL 129
K + A LQ K H +L +L
Sbjct: 209 KDHKLPNTKGRSSSSSSCSSSAAPGQHLQPMAKDHHTDLTTL 250
>UNIPROTKB|E2R2R4 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0046622 "positive regulation of
organ growth" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0045627
"positive regulation of T-helper 1 cell differentiation"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0001889
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557
Ensembl:ENSCAFT00000018023 Uniprot:E2R2R4
Length = 405
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 41/114 (35%), Positives = 63/114 (55%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 285 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342
Query: 96 KDYEVLKKQFE-ALKADNDSLQAQNKKLHAELVSLKNKDSNNGQVIHLKKE-NE 147
KD E +K A AD + + + E S +++DS + ++ E NE
Sbjct: 343 KDKEAGEKPSGGAAAADGEQEERSLSRSEGEAES-ESRDSESLDMVPSDTEQNE 395
>ZFIN|ZDB-GENE-020117-2 [details] [associations]
symbol:gbx1 "gastrulation brain homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0060827 "regulation of canonical Wnt receptor
signaling pathway involved in neural plate anterior/posterior
pattern formation" evidence=IGI] [GO:0021555 "midbrain-hindbrain
boundary morphogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-020117-2 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 CTD:2636 eggNOG:NOG315879
HOGENOM:HOG000060099 HOVERGEN:HBG003967 KO:K09321 OMA:RQESPHS
OrthoDB:EOG4N5VXB GeneTree:ENSGT00660000095141 GO:GO:0021555
HSSP:P14653 EMBL:CT583690 EMBL:BC162948 EMBL:BC162949 EMBL:AF288763
IPI:IPI00506443 RefSeq:NP_777286.1 UniGene:Dr.81466 SMR:Q90ZB2
STRING:Q90ZB2 Ensembl:ENSDART00000105572 GeneID:142985
KEGG:dre:142985 InParanoid:Q90ZB2 NextBio:20797048 GO:GO:0060827
Uniprot:Q90ZB2
Length = 316
Score = 127 (49.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 23 GDEDLSDDGSQVGEKKKR---LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIA 79
G +D G G+ ++R EQ+ LEK F L + Q+A AL L Q+
Sbjct: 200 GSQDALPPGGSAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVK 259
Query: 80 IWFQNRRARWK 90
IWFQNRRA+WK
Sbjct: 260 IWFQNRRAKWK 270
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 108 (43.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 32 SQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
S+ +K+ R QV LE+ F L + LA+ L L Q+ IWFQNRR +
Sbjct: 28 SKQPQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKT 87
Query: 90 KTKQLEKDYEVLKK--QFEALKAD 111
K KQL D L+K ALK +
Sbjct: 88 KRKQLSSDLGNLEKPSSLPALKEE 111
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 108 (43.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
EQ+ ALE F+ L +L LA +L L Q+ IWFQNRR +WK KQ
Sbjct: 11 EQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 59
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 108 (43.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q+ LEK F L R++++A L L RQI IWFQNRR ++K Q K
Sbjct: 22 QLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 108 (43.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q+ LEK F L R++++A L L RQI IWFQNRR ++K Q K
Sbjct: 22 QLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 132 (51.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 25 EDLSDDGSQVGEKKK--RLNLEQVKALEKSF-ELGNKLEPERKLQLARALGLQPRQIAIW 81
E+L D + +KK+ R Q++ LE F E + + +RK +L+R L L+P Q+ W
Sbjct: 51 EELQDPSQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRK-ELSRDLNLEPLQVKFW 109
Query: 82 FQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVS 128
FQN+R + K + + ++LK +DND L+A+N + + E +S
Sbjct: 110 FQNKRTQMKAQSERHENQILK-------SDNDKLRAENNR-YKEALS 148
>UNIPROTKB|E2RRG1 [details] [associations]
symbol:NKX6-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:TPLYPAY EMBL:AAEX03016734
Ensembl:ENSCAFT00000014553 NextBio:20861334 Uniprot:E2RRG1
Length = 288
Score = 126 (49.4 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 154 LDKDGKRK-HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 212
Query: 87 ARWKTKQLEKDYEVLKKQ---FEALKADNDSLQAQ---NKKLHA-----ELVSL--KNKD 133
+W+ K + KKQ E LK +++ + NK L ++ L K+K
Sbjct: 213 TKWRKKHAAEMATAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKS 272
Query: 134 SNNGQVIHLKKENE 147
G ++ ENE
Sbjct: 273 GGGGGLLLHASENE 286
>UNIPROTKB|F6XFB6 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 OMA:AHPHASF Ensembl:ENSCAFT00000018023
EMBL:AAEX03018361 EMBL:AAEX03018362 Uniprot:F6XFB6
Length = 438
Score = 129 (50.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 41/114 (35%), Positives = 63/114 (55%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 285 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342
Query: 96 KDYEVLKKQFE-ALKADNDSLQAQNKKLHAELVSLKNKDSNNGQVIHLKKE-NE 147
KD E +K A AD + + + E S +++DS + ++ E NE
Sbjct: 343 KDKEAGEKPSGGAAAADGEQEERSLSRSEGEAES-ESRDSESLDMVPSDTEQNE 395
>MGI|MGI:3053002 [details] [associations]
symbol:Noto "notochord homolog (Xenopus laevis)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060271 "cilium morphogenesis" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:3053002 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0007368 GO:GO:0009953 GO:GO:0009880
GO:GO:0060271 GO:GO:0030903 HSSP:P06601
GeneTree:ENSGT00680000099625 CTD:344022 eggNOG:NOG311470
HOGENOM:HOG000082431 HOVERGEN:HBG108196 OMA:QQKRVRT
OrthoDB:EOG48GW4Q EMBL:AJ862873 EMBL:AJ862874 EMBL:AJ862875
EMBL:AK135886 EMBL:BC139154 EMBL:BC139155 IPI:IPI00379561
RefSeq:NP_001007473.1 UniGene:Mm.347883 ProteinModelPortal:Q5TIS6
SMR:Q5TIS6 STRING:Q5TIS6 PRIDE:Q5TIS6 Ensembl:ENSMUST00000089578
GeneID:384452 KEGG:mmu:384452 UCSC:uc009cpp.2 InParanoid:Q5TIS6
NextBio:404607 Bgee:Q5TIS6 Genevestigator:Q5TIS6 Uniprot:Q5TIS6
Length = 240
Score = 124 (48.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 26 DLSDDGSQVGEKKKR--LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQ 83
DL D G++ K+ R NL+Q++ LEK F + L + + QLA L L Q+ IWFQ
Sbjct: 139 DLRDHGTERHTKRVRTTFNLQQLQELEKVFAKQHNLVGKERAQLAARLHLTENQVRIWFQ 198
Query: 84 NRRARWKTKQ 93
NRR +++ +Q
Sbjct: 199 NRRVKYQKQQ 208
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 126 (49.4 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 19 HHVHGDEDLSDDGSQVGEKKKRLNL-----EQVKALEKSFELGNKLEPERKLQLARALGL 73
HH HG LS G K+KR + EQ++ LE +F+ + + + QLA + L
Sbjct: 267 HH-HGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDL 325
Query: 74 QPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKAD-----NDSLQAQNKKLHAEL-V 127
+ ++ +WF+NRRA+W+ ++ E+ + K Q E + N S + + L V
Sbjct: 326 KEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTV 385
Query: 128 SLKNKDSNNGQVIHLKKE 145
D + Q++H+K +
Sbjct: 386 KCPGSDHYSAQLVHIKSD 403
Score = 39 (18.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 9 SGVNDKCHEDHHVHG 23
+G++ H HH HG
Sbjct: 243 AGLSGHGHHPHHPHG 257
>MGI|MGI:96109 [details] [associations]
symbol:Hlx "H2.0-like homeobox" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IGI;IMP] [GO:0045629 "negative regulation
of T-helper 2 cell differentiation" evidence=IGI;IMP] [GO:0046622
"positive regulation of organ growth" evidence=IMP] [GO:0048484
"enteric nervous system development" evidence=IMP] [GO:0048513
"organ development" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96109 GO:GO:0005634 GO:GO:0030154
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GeneTree:ENSGT00700000104097 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 CTD:3142 eggNOG:NOG331357
HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339 OMA:AHPHASF
OrthoDB:EOG473PRM EMBL:X58250 IPI:IPI00123711 PIR:A39621
RefSeq:NP_032276.1 UniGene:Mm.1347 ProteinModelPortal:Q61670
SMR:Q61670 STRING:Q61670 PRIDE:Q61670 Ensembl:ENSMUST00000048572
GeneID:15284 KEGG:mmu:15284 InParanoid:Q61670 NextBio:287919
Bgee:Q61670 CleanEx:MM_HLX Genevestigator:Q61670
GermOnline:ENSMUSG00000039377 Uniprot:Q61670
Length = 476
Score = 129 (50.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 282 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 339
Query: 96 KDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNKDSNN 136
KD E +K + A+ + + + E S ++ DS +
Sbjct: 340 KDKEAGEKPSGGVPAEGEREERSPSRSEGEAES-ESSDSES 379
>RGD|1311961 [details] [associations]
symbol:Hlx "H2.0-like homeobox" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA;ISO] [GO:0045629 "negative regulation
of T-helper 2 cell differentiation" evidence=IEA;ISO] [GO:0046622
"positive regulation of organ growth" evidence=IEA;ISO] [GO:0048484
"enteric nervous system development" evidence=IEA;ISO] [GO:0048513
"organ development" evidence=ISO] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1311961 GO:GO:0005634 GO:GO:0030154 GO:GO:0008284
GO:GO:0001889 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 CTD:3142
eggNOG:NOG331357 HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339
OMA:AHPHASF OrthoDB:EOG473PRM EMBL:BC127513 IPI:IPI00194237
RefSeq:NP_001071142.1 UniGene:Rn.35243 ProteinModelPortal:A0JPN1
SMR:A0JPN1 Ensembl:ENSRNOT00000003155 GeneID:364069 KEGG:rno:364069
UCSC:RGD:1311961 InParanoid:A0JPN1 NextBio:684784
Genevestigator:A0JPN1 Uniprot:A0JPN1
Length = 476
Score = 129 (50.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 282 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 339
Query: 96 KDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNKDSNN 136
KD E +K + A+ + + + E S ++ DS +
Sbjct: 340 KDKEAGEKPSGGVPAEGEREERSPSRSEGEAES-ESSDSES 379
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 131 (51.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 37 KKKRLN---LEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
KKKR + Q++ +E F+ + + +L+L++ LGL P Q+ WFQN+R + K +Q
Sbjct: 88 KKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQ 147
Query: 94 LEKDYEVLKKQFEALKADNDSLQA 117
D LK + E LK ++ ++Q+
Sbjct: 148 SRSDNAKLKAENETLKTESQNIQS 171
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 121 (47.7 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S G + +K+ Q++ LE+ F + E++LQL+R L L RQ+ IWFQNRR
Sbjct: 125 SSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM 184
Query: 88 RWKTKQLEKD 97
K K++ +D
Sbjct: 185 --KEKKINRD 192
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 107 (42.7 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
EQ+ ALE F L +L LA +L L Q+ IWFQNRR +WK KQ
Sbjct: 25 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 73
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 107 (42.7 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
LEK F + RK +LA LGL RQ+ IWFQNRRA K +++ K
Sbjct: 37 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRA--KERKINK 82
>WB|WBGene00000428 [details] [associations]
symbol:ceh-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080880 EMBL:X52810 PIR:S13128
PIR:T16081 PIR:T37298 RefSeq:NP_508796.1 ProteinModelPortal:P53547
SMR:P53547 EnsemblMetazoa:F16H11.4.1 EnsemblMetazoa:F16H11.4.2
GeneID:191614 KEGG:cel:CELE_F16H11.4 UCSC:F16H11.4 CTD:191614
WormBase:F16H11.4 eggNOG:NOG286158 HOGENOM:HOG000020299
InParanoid:P53547 OMA:DANTPQT NextBio:949682 Uniprot:P53547
Length = 132
Score = 107 (42.7 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
EQ+ ALE F+ L +L LA L L Q+ IWFQNRR +WK
Sbjct: 11 EQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK 57
>UNIPROTKB|F1NZK4 [details] [associations]
symbol:F1NZK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:AADN02078917 EMBL:AADN02078918
IPI:IPI00814051 Ensembl:ENSGALT00000038675 OMA:AKTIPSC
Uniprot:F1NZK4
Length = 179
Score = 118 (46.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/85 (34%), Positives = 41/85 (48%)
Query: 22 HGDEDLSDDGSQVGEKKKR----LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQ 77
+GD Q G KK+ + QV LE +F++ L + LA +L L Q
Sbjct: 52 YGDRQRDGGDRQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQ 111
Query: 78 IAIWFQNRRARWKTKQLEKDYEVLK 102
+ WFQNRR +WK +QL + E K
Sbjct: 112 VKTWFQNRRNKWK-RQLSAELEAAK 135
>UNIPROTKB|F1N4U7 [details] [associations]
symbol:BARHL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045727 "positive
regulation of translation" evidence=IEA] [GO:0030516 "regulation of
axon extension" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0001764
GO:GO:0030182 GO:GO:0043565 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030516
GO:GO:0045727 GO:GO:0001709 GeneTree:ENSGT00700000104206 KO:K09360
CTD:343472 OMA:ISVTMEH EMBL:DAAA02007925 IPI:IPI00693131
RefSeq:NP_001179226.1 UniGene:Bt.87288 Ensembl:ENSBTAT00000007796
GeneID:539708 KEGG:bta:539708 NextBio:20878169 Uniprot:F1N4U7
Length = 380
Score = 127 (49.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/116 (34%), Positives = 57/116 (49%)
Query: 3 KRSMSFSGVNDKCHEDHHVHGDEDLSD--DGSQVGEKKKR-----LNLEQVKALEKSFEL 55
KR S S V KCH GD ++S + V KK R + Q+ LE+SFE
Sbjct: 190 KREESQSDV--KCHGTKE-EGDREISSSRESPPVRAKKPRKARTAFSDHQLNQLERSFER 246
Query: 56 GNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK--QFEALK 109
L + ++ LA AL L Q+ W+QNRR +WK +Q E+L + + AL+
Sbjct: 247 QKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK-RQTAVGLELLAEAGNYSALQ 301
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 211
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G++ + +QV LEK F L R++++A +L L RQI IWFQNRR
Sbjct: 148 SYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRM 207
Query: 88 RWK 90
+WK
Sbjct: 208 KWK 210
>UNIPROTKB|F8VVX3 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL445423 HGNC:HGNC:4978 IPI:IPI00643042
ProteinModelPortal:F8VVX3 SMR:F8VVX3 Ensembl:ENST00000549319
OMA:ESTQAPL ArrayExpress:F8VVX3 Bgee:F8VVX3 Uniprot:F8VVX3
Length = 274
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 71 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 128
Query: 96 KDYEVLKKQFE-ALKADNDSLQAQNKKLHAELVSLKNKDSNN 136
KD E +K A AD + + + E S ++ DS +
Sbjct: 129 KDKEAGEKPSGGAPAADGEQDERSPSRSEGEAES-ESSDSES 169
>ZFIN|ZDB-GENE-980526-291 [details] [associations]
symbol:hoxb8b "homeo box B8b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-291
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 HOVERGEN:HBG016849
EMBL:AL645798 GeneTree:ENSGT00700000104332 EMBL:DQ060549
EMBL:AF071255 EMBL:Y14534 IPI:IPI00480876 RefSeq:NP_571256.1
UniGene:Dr.132197 ProteinModelPortal:Q8JH55 SMR:Q8JH55
Ensembl:ENSDART00000076154 GeneID:30420 KEGG:dre:30420 CTD:30420
eggNOG:NOG314669 InParanoid:Q8JH55 OrthoDB:EOG4H464V
NextBio:20806825 ArrayExpress:Q8JH55 Bgee:Q8JH55 Uniprot:Q8JH55
Length = 247
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ AL L RQ+ IWFQNRR +WK K+ KD +
Sbjct: 156 QTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-KEHNKD------K 208
Query: 105 FEALKADNDSLQAQNKK 121
F + KA+ + ++ + ++
Sbjct: 209 FPSSKAEQEEIERERQE 225
>UNIPROTKB|Q9W7E8 [details] [associations]
symbol:koza "Homeobox protein koza" species:8355 "Xenopus
laevis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 HSSP:P22808
EMBL:AF127225 RefSeq:NP_001079169.1 UniGene:Xl.510
ProteinModelPortal:Q9W7E8 SMR:Q9W7E8 GeneID:373737 KEGG:xla:373737
CTD:373737 Xenbase:XB-GENE-6252708 HOVERGEN:HBG006689 KO:K09348
Uniprot:Q9W7E8
Length = 213
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/102 (36%), Positives = 51/102 (50%)
Query: 17 EDHHVH--GDEDLSDDGSQ---------VGEKKKR----LNLEQVKALEKSFELGNKLEP 61
E HH H DE+L D +Q +++KR + QV LE+ F L
Sbjct: 70 EIHHSHMEADENLELDTAQPITAVENKLAKQQQKRSRAAFSHSQVIELERKFSSQKYLSA 129
Query: 62 ERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK 103
+ QLA++L L Q+ IWFQNRR + K KQL D E ++K
Sbjct: 130 PERAQLAKSLKLTETQVKIWFQNRRYKTKRKQLATDMEEVEK 171
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 158 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 158 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/101 (27%), Positives = 51/101 (50%)
Query: 36 EKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
+KK R + Q+ LEK F L + LA+AL + Q+ WFQNRR +W+ +Q
Sbjct: 12 KKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR-RQ 70
Query: 94 LEKDYEVLKKQFEAL--KADNDSLQAQ-NKKLHAELVSLKN 131
++ E ++Q + + ++ Q N+ + A+ + + N
Sbjct: 71 TAEEREAERQQANRILMQLQQEAFQKTINQPIQADPICVHN 111
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 35 GEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQ 93
G KK+ Q LEK F L ER+L++++++ L RQ+ IWFQNRR + K
Sbjct: 21 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMS 80
Query: 94 LE 95
E
Sbjct: 81 RE 82
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 32 SQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
S+ +K+ R QV LE+ F L + LA+ L L Q+ IWFQNRR +
Sbjct: 26 SKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKT 85
Query: 90 KTKQLEKDYEVLKKQ--FEALKAD 111
K KQL D L+K ALK +
Sbjct: 86 KRKQLTSDLGDLEKHSSLPALKEE 109
>UNIPROTKB|G3V397 [details] [associations]
symbol:BARX2 "Homeobox protein BarH-like 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0042637 "catagen" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0001502 GO:GO:0000976 EMBL:AP003775 HGNC:HGNC:956
GO:GO:0042637 GO:GO:0014902 ProteinModelPortal:G3V397 SMR:G3V397
Ensembl:ENST00000526127 ArrayExpress:G3V397 Bgee:G3V397
Uniprot:G3V397
Length = 134
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEAL 108
LEK F+ L +L LA++LGL Q+ W+QNRR +WK L+ E K
Sbjct: 3 LEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRP 62
Query: 109 KADN----DSLQAQNKKLHAELVSLKNKDSNNGQ 138
K ++ + ++A+ +K++++ + + + GQ
Sbjct: 63 KKNSIPTSEEIEAE-EKMNSQAQGQEQLEPSQGQ 95
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
LEK F + RK +LA LGL RQ+ IWFQNRRA+ + +K + ++Q
Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQQQQ 75
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
LEK F + RK +LA LGL RQ+ IWFQNRRA+ + +K + ++Q
Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQQQQ 75
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
EQ++ LE+SF L + +LA +LGL Q+ +WFQNRR + K
Sbjct: 45 EQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>ZFIN|ZDB-GENE-080204-54 [details] [associations]
symbol:hmx1 "H6 homeo box 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0043010 "camera-type
eye development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-080204-54 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043010
GeneTree:ENSGT00700000104333 EMBL:AL929576 EMBL:EU203551
IPI:IPI00884721 UniGene:Dr.45660 Ensembl:ENSDART00000113087
HOVERGEN:HBG101086 Uniprot:B2KTE5
Length = 282
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 1 MMKRSMSFSGVN--DKCHEDHHVHGDEDLSDDGSQVGEKKKR--LNLEQVKALEKSFELG 56
++ R MS V+ D + D S+ GS +KK R + QV LE +F++
Sbjct: 114 VVDRKMSGCAVDEGDDARQLFDERSGPDTSEPGS-ARKKKTRTVFSRSQVFQLESTFDMK 172
Query: 57 NKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
L + LA +L L Q+ IWFQNRR +WK +QL D E +
Sbjct: 173 RYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-RQLAADLEAV 216
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/69 (42%), Positives = 35/69 (50%)
Query: 32 SQVGEKKK----RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S G K+K R +Q K LE F L PE + LA L L RQ+ WFQNRRA
Sbjct: 188 SNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRA 247
Query: 88 RWKTKQLEK 96
+W+ L K
Sbjct: 248 KWRRANLSK 256
>UNIPROTKB|F1NPY3 [details] [associations]
symbol:F1NPY3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
Uniprot:F1NPY3
Length = 204
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 36 EKKKRL--NLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW-KTK 92
+KK R + EQ++ LEK F+ + E++ ++A +G+ P++I +WFQNRRA+W KT+
Sbjct: 9 KKKTRTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWRKTE 68
Query: 93 Q 93
+
Sbjct: 69 K 69
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 121 (47.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R++++A AL L RQI IWFQNRR +WK + E+
Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 191
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/101 (36%), Positives = 55/101 (54%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQL----EKDYEV 100
Q LEK F + L R++++A AL L RQI IWFQNRR + K K+L E + +
Sbjct: 32 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK-KELRAVKEINEQA 90
Query: 101 LKKQFEALKADNDSLQ-AQ---NKKLHAELVSLKNKDSNNG 137
+++ E K NDSL+ AQ N + E + ++ S+ G
Sbjct: 91 RREREEQDKMKNDSLKSAQQHHNSQKQQEQTIVGSQQSSGG 131
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 118 (46.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ AL L RQ+ IWFQNRR +WK K+ KD + +Q
Sbjct: 104 QTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-KENNKDKFPVSRQ 162
>ZFIN|ZDB-GENE-000329-2 [details] [associations]
symbol:hoxb7a "homeo box B7a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
Bgee:Q8AWY9 Uniprot:Q8AWY9
Length = 227
Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L R++++A AL L RQI IWFQNRR +WK + D
Sbjct: 156 QTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSTD 208
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ AL L RQ+ IWFQNRR +WK K+ KD + +Q
Sbjct: 117 QTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-KENNKDKFPVSRQ 175
Query: 105 FEALKADNDSLQAQ 118
EA K +AQ
Sbjct: 176 -EA-KDGETKKEAQ 187
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 166 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 225
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 34 VGEKKKRLNL----EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
+ K KR+ Q+ LE +FE + + + QLA +L L Q+ +WFQNRR ++
Sbjct: 32 LARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKF 91
Query: 90 KTKQLEKD 97
K ++LE++
Sbjct: 92 KRQKLEEE 99
>UNIPROTKB|F6UVZ9 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 OMA:AEGSCAF
GeneTree:ENSGT00700000104332 Ensembl:ENSCAFT00000026682
EMBL:AAEX03006516 Uniprot:F6UVZ9
Length = 232
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/73 (41%), Positives = 38/73 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L R++++A AL L RQI IWFQNRR +WK + L +
Sbjct: 157 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAE 216
Query: 105 FEALKADNDSLQA 117
E K D+LQA
Sbjct: 217 EEEEKPA-DALQA 228
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 142 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 201
Query: 88 RWK 90
+WK
Sbjct: 202 KWK 204
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 122 (48.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/106 (31%), Positives = 44/106 (41%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 152 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 211
Query: 91 -------TKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSL 129
TK + A LQ K H +L +L
Sbjct: 212 KDHKLPNTKGRSSSSSSSSSSCSSSTAPGQHLQPLAKDHHTDLTTL 257
>ZFIN|ZDB-GENE-001206-2 [details] [associations]
symbol:lbx2 "ladybird homeobox homolog 2
(Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0055001
"muscle cell development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
Uniprot:Q9DD91
Length = 257
Score = 122 (48.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 23 GDEDLSDDGSQVGEKKKRLNL-----EQVKALEKSFELGNKLEPERKLQLARALGLQPRQ 77
G E ++ G + KK+R + Q+ LEK F L P + Q+A+ LGL Q
Sbjct: 110 GREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFWYQKYLSPADRDQIAQQLGLTNAQ 169
Query: 78 IAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAELVSLKNKDSNNG 137
+ WFQNRRA+ LK+ E +KAD +SL+ + +LVS+++ + +G
Sbjct: 170 VITWFQNRRAK------------LKRDLEEMKADVESLKKIPPQALQKLVSMEDMEDAHG 217
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R++++A AL L RQI IWFQNRR +WK + E+
Sbjct: 141 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 192
>UNIPROTKB|F1SLF3 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:FP089556 RefSeq:XP_003125078.1 UniGene:Ssc.67372
Ensembl:ENSSSCT00000009097 GeneID:100521005 KEGG:ssc:100521005
Uniprot:F1SLF3
Length = 263
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 25 EDLSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQN 84
+DL D + NLEQ++ LEK F + L +++ QLA L L Q+ +WFQN
Sbjct: 159 QDLQDTERSQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLAAQLNLTENQVRVWFQN 218
Query: 85 RRARWKTKQ 93
RR +++ +Q
Sbjct: 219 RRVKYQKQQ 227
>ZFIN|ZDB-GENE-041229-4 [details] [associations]
symbol:pitx3 "paired-like homeodomain transcription
factor 3" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0035270 "endocrine system
development" evidence=IMP] [GO:0021984 "adenohypophysis
development" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-041229-4 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0021984 GO:GO:0002088 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 EMBL:AY525643
EMBL:AY639155 EMBL:AY643793 EMBL:CR626878 EMBL:BC094961
IPI:IPI00485762 RefSeq:NP_991238.1 UniGene:Dr.89375
ProteinModelPortal:Q6QU75 SMR:Q6QU75 STRING:Q6QU75
Ensembl:ENSDART00000102538 GeneID:402974 KEGG:dre:402974 CTD:5309
InParanoid:Q6DUF5 KO:K09357 OMA:ASPYMYR OrthoDB:EOG42Z4R4
NextBio:20816783 Bgee:Q6QU75 Uniprot:Q6QU75
Length = 293
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/99 (26%), Positives = 53/99 (53%)
Query: 12 NDKCHEDHHVHGDEDLSDDGS-QVGEKKKRLNL--EQVKALEKSFELGNKLEPERKLQLA 68
N + H H DE +DGS + ++++R + +Q++ LE +F+ + + ++A
Sbjct: 35 NSDTEKSHQNHTDESNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 94
Query: 69 RALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEA 107
L ++ +WF+NRRA+W+ ++ + E+ K F A
Sbjct: 95 VWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGA 133
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 30 DGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
+G + + +QV LEK F L R++++A +L L RQI IWFQNRR +W
Sbjct: 152 NGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 211
Query: 90 K 90
K
Sbjct: 212 K 212
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 30 DGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
+G + + +QV LEK F L R++++A +L L RQI IWFQNRR +W
Sbjct: 152 NGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 211
Query: 90 K 90
K
Sbjct: 212 K 212
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 30 DGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
+G + + +QV LEK F L R++++A +L L RQI IWFQNRR +W
Sbjct: 152 NGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 211
Query: 90 K 90
K
Sbjct: 212 K 212
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 30 DGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
+G + + +QV LEK F L R++++A +L L RQI IWFQNRR +W
Sbjct: 152 NGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 211
Query: 90 K 90
K
Sbjct: 212 K 212
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 30 DGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARW 89
+G + + +QV LEK F L R++++A +L L RQI IWFQNRR +W
Sbjct: 152 NGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 211
Query: 90 K 90
K
Sbjct: 212 K 212
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 23 GDEDLSDDGSQVGEKKKRLNLE---QVKALEKSFELGNKLEPERKLQLARALGLQPRQIA 79
GDED + + ++K + + Q++ LE F+ +++L+L + L L+ +QI
Sbjct: 43 GDEDKQEQRPKKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIK 102
Query: 80 IWFQNRRARWKTKQLEKDYEV-LKKQFEALKADNDSLQ 116
WFQNRR + KT QLE+ V LK++ E L+ +N L+
Sbjct: 103 FWFQNRRTQMKT-QLERHENVILKQENEKLRLENSFLK 139
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 148 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 207
Query: 91 TKQLEKDYEVLKKQFEALKADNDS 114
KD+++ + + A +S
Sbjct: 208 -----KDHKLPNTKIRSNSASTNS 226
>ZFIN|ZDB-GENE-990415-111 [details] [associations]
symbol:hoxc11a "homeo box C11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-111 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231898
HOVERGEN:HBG052048 KO:K09296 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 eggNOG:NOG298161 OrthoDB:EOG4J3WHN
OMA:EEHTNSG EMBL:BC091858 EMBL:DQ060558 EMBL:AF071258 EMBL:Y14541
IPI:IPI00502457 RefSeq:NP_571240.1 UniGene:Dr.132200 HSSP:P09631
ProteinModelPortal:Q58EL0 SMR:Q58EL0 Ensembl:ENSDART00000103146
GeneID:30403 KEGG:dre:30403 CTD:30403 InParanoid:Q58EL0
NextBio:20806813 ArrayExpress:Q58EL0 Bgee:Q58EL0 Uniprot:Q58EL0
Length = 306
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 23 GDEDLSDDGSQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAI 80
G+ S S +KKR Q++ LE+ F + E++LQL+R L L RQ+ I
Sbjct: 221 GNASKSSHSSTPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKI 280
Query: 81 WFQNRRARWKTKQLEKD 97
WFQNRR K K+L +D
Sbjct: 281 WFQNRRM--KEKKLSRD 295
>UNIPROTKB|E1C676 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AADN02020025 EMBL:AADN02020026 EMBL:AADN02020027
EMBL:AADN02020028 EMBL:AADN02020029 EMBL:AADN02020030
IPI:IPI00581324 Ensembl:ENSGALT00000029909 OMA:PERTECA
ArrayExpress:E1C676 Uniprot:E1C676
Length = 307
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 253 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 304
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 104 (41.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 37 KKKRL--NLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
+KKR Q LEK F L ER+L+++R + L RQ+ IWFQNRR + K
Sbjct: 1 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLK 56
>FB|FBgn0000439 [details] [associations]
symbol:Dfd "Deformed" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007420 "brain
development" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS;TAS] [GO:0007380 "specification of segmental identity,
head" evidence=NAS] [GO:0060322 "head development" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=IGI;IMP] [GO:0048598
"embryonic morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0007420 GO:GO:0006917 GO:GO:0048598
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0003705
GO:GO:0000122 EMBL:AE001572 GO:GO:0000977 GO:GO:0060322 EMBL:X05136
EMBL:M13373 PIR:A26638 RefSeq:NP_477201.1 UniGene:Dm.5282
ProteinModelPortal:P07548 SMR:P07548 DIP:DIP-18055N IntAct:P07548
MINT:MINT-858733 STRING:P07548 EnsemblMetazoa:FBtr0081621
GeneID:40832 KEGG:dme:Dmel_CG2189 UCSC:CG2189-RA CTD:40832
FlyBase:FBgn0000439 eggNOG:NOG314883 HOGENOM:HOG000290519
InParanoid:P07548 KO:K09304 OMA:DLMAETT OrthoDB:EOG49CNQM
PhylomeDB:P07548 GenomeRNAi:40832 NextBio:820832 Bgee:P07548
GermOnline:CG2189 Uniprot:P07548
Length = 586
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 20 HVHGDEDLS-DDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQI 78
HV G + S G + ++ Q+ LEK F L R++++A L L RQI
Sbjct: 351 HVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQI 410
Query: 79 AIWFQNRRARWKT-KQLEKDYEVLKKQFEA 107
IWFQNRR +WK +L V KK +A
Sbjct: 411 KIWFQNRRMKWKKDNKLPNTKNVRKKTVDA 440
>RGD|1307280 [details] [associations]
symbol:Nkx6-2 "NK6 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0010454 "negative regulation of
cell fate commitment" evidence=IEA;ISO] [GO:0010455 "positive
regulation of cell fate commitment" evidence=IEA;ISO] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA;ISO] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA;ISO] [GO:0022010 "central nervous
system myelination" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045686 "negative regulation of glial
cell differentiation" evidence=IEA;ISO] [GO:0045687 "positive
regulation of glial cell differentiation" evidence=IEA;ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1307280
GO:GO:0005634 GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0022010 GO:GO:0031018 GO:GO:0000976 EMBL:CH473953
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 OrthoDB:EOG4JT064
GO:GO:0021912 CTD:84504 KO:K09350 OMA:GPAGFKA IPI:IPI00779623
RefSeq:NP_001101028.1 UniGene:Rn.222182 SMR:D3ZZX2
Ensembl:ENSRNOT00000054887 GeneID:309095 KEGG:rno:309095
UCSC:RGD:1307280 NextBio:660104 Uniprot:D3ZZX2
Length = 277
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 142 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 200
Query: 87 ARWKTKQLEKDYEVLKKQ 104
+W+ + + KKQ
Sbjct: 201 TKWRKRHAAEMASAKKKQ 218
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 22 HGDEDLSDDGSQVGEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAI 80
H ++ G Q KK+ Q++ LE+ F + E++LQL+R L L RQ+ I
Sbjct: 228 HTEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKI 287
Query: 81 WFQNRRARWKTKQLEKD 97
WFQNRR K K++ +D
Sbjct: 288 WFQNRRM--KEKKINRD 302
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 22 HGDEDLSDDGSQVGEKKK-RLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAI 80
H ++ G Q KK+ Q++ LE+ F + E++LQL+R L L RQ+ I
Sbjct: 228 HTEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKI 287
Query: 81 WFQNRRARWKTKQLEKD 97
WFQNRR K K++ +D
Sbjct: 288 WFQNRRM--KEKKINRD 302
>UNIPROTKB|J9P8I3 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:GPAGFKA EMBL:AAEX03015714
Ensembl:ENSCAFT00000048528 Uniprot:J9P8I3
Length = 281
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 147 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 205
Query: 87 ARWKTKQLEKDYEVLKKQ 104
+W+ + + KKQ
Sbjct: 206 TKWRKRHAAEMASAKKKQ 223
>MGI|MGI:1206039 [details] [associations]
symbol:Nkx6-1 "NK6 homeobox 1" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;TAS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IGI] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IGI;IMP]
[GO:0031018 "endocrine pancreas development" evidence=IGI;IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044424 "intracellular part" evidence=IDA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IDA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IGI] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IGI]
Reactome:REACT_13641 InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1206039
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008283
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Reactome:REACT_127416 GO:GO:0035094 GO:GO:0045666 GO:GO:0031018
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF357883 EMBL:BC138019
EMBL:BC138020 EMBL:AF291666 IPI:IPI00117513 RefSeq:NP_659204.1
UniGene:Mm.193072 ProteinModelPortal:Q99MA9 SMR:Q99MA9
STRING:Q99MA9 PhosphoSite:Q99MA9 PRIDE:Q99MA9
Ensembl:ENSMUST00000044125 GeneID:18096 KEGG:mmu:18096
UCSC:uc008yim.1 InParanoid:B2RQP4 NextBio:293251 Bgee:Q99MA9
Genevestigator:Q99MA9 GermOnline:ENSMUSG00000035187 Uniprot:Q99MA9
Length = 365
Score = 124 (48.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 231 LDKDGKRK-HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 289
Query: 87 ARWKTKQLEKDYEVLKKQ---FEALKADNDS 114
+W+ K + KKQ E LK +++
Sbjct: 290 TKWRKKHAAEMATAKKKQDSETERLKGTSEN 320
>RGD|69318 [details] [associations]
symbol:Nkx6-1 "NK6 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003323 "type B pancreatic cell
development" evidence=IEP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0007224
"smoothened signaling pathway" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA;ISO] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0031018
"endocrine pancreas development" evidence=ISO] [GO:0032024 "positive
regulation of insulin secretion" evidence=IMP] [GO:0035094 "response
to nicotine" evidence=IEP] [GO:0042493 "response to drug"
evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0044424 "intracellular part" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA;ISO] [GO:0045687 "positive regulation
of glial cell differentiation" evidence=IEA;ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0071345
"cellular response to cytokine stimulus" evidence=IEP] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEP]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:69318 GO:GO:0005634 GO:GO:0022008 GO:GO:0042493
GO:GO:0008283 GO:GO:0043565 GO:GO:0032024 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0035094 GO:GO:0045666
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF004431 IPI:IPI00212312
RefSeq:NP_113925.1 UniGene:Rn.11387 ProteinModelPortal:O35762
SMR:O35762 STRING:O35762 Ensembl:ENSRNOT00000002928 GeneID:65193
KEGG:rno:65193 InParanoid:O35762 NextBio:614120
Genevestigator:O35762 GermOnline:ENSRNOG00000002149 Uniprot:O35762
Length = 365
Score = 124 (48.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 231 LDKDGKRK-HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 289
Query: 87 ARWKTKQLEKDYEVLKKQ---FEALKADNDS 114
+W+ K + KKQ E LK +++
Sbjct: 290 TKWRKKHAAEMATAKKKQDSETERLKGTSEN 320
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQI IWFQNRR +WK
Sbjct: 148 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 207
>UNIPROTKB|O14627 [details] [associations]
symbol:CDX4 "Homeobox protein CDX-4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0060711 "labyrinthine
layer development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001568
GO:GO:0000976 EMBL:CH471104 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:AF003530 EMBL:AF029879 EMBL:AF029877 EMBL:AF029878
EMBL:AL450108 EMBL:BC128233 IPI:IPI00023058 RefSeq:NP_005184.1
UniGene:Hs.553488 ProteinModelPortal:O14627 SMR:O14627
STRING:O14627 PhosphoSite:O14627 PRIDE:O14627
Ensembl:ENST00000373514 GeneID:1046 KEGG:hsa:1046 UCSC:uc011mqk.2
CTD:1046 GeneCards:GC0XP072583 HGNC:HGNC:1808 MIM:300025
neXtProt:NX_O14627 PharmGKB:PA26353 InParanoid:O14627 OMA:FQPIEIQ
PhylomeDB:O14627 GenomeRNAi:1046 NextBio:4385 Bgee:O14627
CleanEx:HS_CDX4 Genevestigator:O14627 GermOnline:ENSG00000131264
Uniprot:O14627
Length = 284
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEAL 108
LEK F + +RK +LA LGL RQ+ IWFQNRRA+ + K ++K + ++
Sbjct: 188 LEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK-ERKMIKKKISQFENSGGSV 246
Query: 109 KADNDSL 115
++D+DS+
Sbjct: 247 QSDSDSI 253
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 119 (46.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQL----EKDYEV 100
Q LEK F + L R++++A AL L RQI IWFQNRR + K K+L E + +
Sbjct: 54 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK-KELRAVKEINEQA 112
Query: 101 LKKQFEALKADNDSLQA 117
+++ E K NDSL++
Sbjct: 113 RREREEQDKMKNDSLKS 129
>UNIPROTKB|Q6RFL5 [details] [associations]
symbol:BSX "Brain-specific homeobox protein homolog"
species:9031 "Gallus gallus" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007420 "brain development"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060056 "mammary gland
involution" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0007420 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 EMBL:AY500594
IPI:IPI00581246 RefSeq:NP_989843.1 UniGene:Gga.9478
ProteinModelPortal:Q6RFL5 SMR:Q6RFL5 Ensembl:ENSGALT00000010527
GeneID:395183 KEGG:gga:395183 CTD:390259 eggNOG:NOG242366
HOVERGEN:HBG050738 InParanoid:Q6RFL5 OMA:LHKPEHH OrthoDB:EOG4KKZ41
NextBio:20815273 Uniprot:Q6RFL5
Length = 233
Score = 120 (47.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 6 MSFSGVNDKCHEDHHVHGDEDLSDDGSQVGEKKKR--LNLEQVKALEKSFELGNKLEPER 63
++ SGV HH H + G +K R + Q+ LEK FE+ L
Sbjct: 86 LTTSGVPVPALFPHHAHAELP----GKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPE 141
Query: 64 KLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYE 99
+++LA AL L Q+ WFQNRR + K KQL K +
Sbjct: 142 RVELATALSLSETQVKTWFQNRRMKHK-KQLRKSQD 176
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 174 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 233
Query: 88 RWK 90
+WK
Sbjct: 234 KWK 236
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 174 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 233
Query: 88 RWK 90
+WK
Sbjct: 234 KWK 236
>UNIPROTKB|F1NVN6 [details] [associations]
symbol:MNR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AADN02016763 IPI:IPI00586200
Ensembl:ENSGALT00000018518 OMA:MAVEPEK Uniprot:F1NVN6
Length = 158
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 44 EQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKT--KQLEKDYEVL 101
+Q+ LE F+L L ++ ++A +L L Q+ IWFQNRR +WK K E+ V
Sbjct: 21 QQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKAKEQGMAVE 80
Query: 102 KKQFEAL-KADNDSLQAQ 118
++ L KAD L +Q
Sbjct: 81 PEKPRGLGKADESLLPSQ 98
>RGD|1308265 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA;ISO] [GO:0008344
"adult locomotory behavior" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308265 GO:GO:0007420
GO:GO:0043565 GO:GO:0008344 GO:GO:0008343 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 OrthoDB:EOG4BCDNN IPI:IPI00764573
Ensembl:ENSRNOT00000057055 UCSC:RGD:1308265 Uniprot:D3ZMA3
Length = 381
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 47/188 (25%), Positives = 83/188 (44%)
Query: 31 GSQVGEKKKR---LNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
GSQ ++++ +Q++ALEK+F+ + + + +LA L ++ +WF+NRRA
Sbjct: 65 GSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRA 124
Query: 88 RWKTKQLEKDYEVLKKQFEALKADNDSLQ---AQNKKLHAELV-SLKNKDSNNGQVIHLK 143
+++ KQ E L+KQ EA + + A N +L AE SL + D + L
Sbjct: 125 KFRKKQRSLQKEQLQKQKEAEGSHGEGKMETPASNTQLEAEQPPSLPSGDPPAELQLSLS 184
Query: 144 KENEXXXXXXXXXXXXXXXXXXRTQVITSPVSSSH-LTSKQLFPTSTRPAAGSMTQLLQG 202
+++ + SP S S L K+ P + P + ++T
Sbjct: 185 EQSASESAPEDQLDREEDSRAEEPKAEKSPGSESKVLGCKRASPKADSPGSLAITPAAPA 244
Query: 203 SSI--PDH 208
S+ P H
Sbjct: 245 GSLLGPSH 252
>UNIPROTKB|E1BRT6 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104054 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 IPI:IPI00820869
Ensembl:ENSGALT00000038688 ArrayExpress:E1BRT6 Uniprot:E1BRT6
Length = 329
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 277 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 328
>UNIPROTKB|F1S4E7 [details] [associations]
symbol:BARHL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045727 "positive
regulation of translation" evidence=IEA] [GO:0030516 "regulation of
axon extension" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0001764
GO:GO:0030182 GO:GO:0043565 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030516
GO:GO:0045727 GO:GO:0001709 GeneTree:ENSGT00700000104206
OMA:ISVTMEH EMBL:CU693425 Ensembl:ENSSSCT00000007572 Uniprot:F1S4E7
Length = 384
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 3 KRSMSFSGVNDKCHEDHHVHGDEDL--SDDGSQVGEKKKR-----LNLEQVKALEKSFEL 55
KR S S + KCH GD ++ S + V KK R + Q+ LE+SFE
Sbjct: 194 KREESQSDI--KCHGTKE-EGDREITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFER 250
Query: 56 GNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK--QFEALK 109
L + ++ LA AL L Q+ W+QNRR +WK +Q E+L + + AL+
Sbjct: 251 QKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK-RQTAVGLELLAEAGNYSALQ 305
>UNIPROTKB|J9PB70 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000049459 Uniprot:J9PB70
Length = 332
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKD 97
Q LEK F L +R+++++ ALGL RQ+ IWFQNRR +WK K+ KD
Sbjct: 275 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 326
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQ 104
Q LEK F L +R+++++ AL L RQ+ IWFQNRR +WK K+ KD + +Q
Sbjct: 139 QTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-KENNKDKFPVSRQ 197
Query: 105 FEALKADNDSLQAQ 118
EA K +AQ
Sbjct: 198 -EA-KDGETKKEAQ 209
>UNIPROTKB|F1NDR5 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00596089
GeneTree:ENSGT00700000104333 EMBL:AADN02014984
Ensembl:ENSGALT00000025153 Uniprot:F1NDR5
Length = 298
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 17 EDHHVHGDEDLSDDGSQVGEKKKRLNL---EQVKALEKSFELGNKLEPERKLQLARALGL 73
E+ G+E + G KKK + QV LE +F++ L + LA +L L
Sbjct: 146 EEEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHL 205
Query: 74 QPRQIAIWFQNRRARWKTKQLEKDYE 99
Q+ IWFQNRR +WK +QL D E
Sbjct: 206 TETQVKIWFQNRRNKWK-RQLAADLE 230
>UNIPROTKB|H9L0A6 [details] [associations]
symbol:HOXC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal joint
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09296 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 CTD:3227 OMA:EEHTNSG EMBL:AADN02039879
RefSeq:XP_428250.2 Ensembl:ENSGALT00000022365 GeneID:430698
KEGG:gga:430698 Uniprot:H9L0A6
Length = 300
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 21 VHGDEDLSDDGSQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQI 78
V+ + S + S +KKR Q++ LE+ F + E++LQL+R L L RQ+
Sbjct: 213 VNKEGSKSSNSSAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 272
Query: 79 AIWFQNRRARWKTKQLEKD 97
IWFQNRR K K+L +D
Sbjct: 273 KIWFQNRRM--KEKKLSRD 289
>ZFIN|ZDB-GENE-020509-2 [details] [associations]
symbol:gbx2 "gastrulation brain homeo box 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-020509-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 HOVERGEN:HBG003967 KO:K09321
GeneTree:ENSGT00660000095141 CTD:2637 OMA:HQEAARK HSSP:P14653
EMBL:CR847983 EMBL:BC059413 EMBL:AB075028 IPI:IPI00494659
RefSeq:NP_694496.1 UniGene:Dr.17548 SMR:Q8QGU1 STRING:Q8QGU1
Ensembl:ENSDART00000015333 GeneID:245948 KEGG:dre:245948
InParanoid:Q8QGU1 NextBio:20797200 Uniprot:Q8QGU1
Length = 342
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 18 DHHVHGDEDLSDDGSQVGEKKKR--LNLEQVKALEKSFELGNKLEPERKLQLARALGLQP 75
D VHG + S +++R EQ+ LEK F L + Q+A AL L
Sbjct: 223 DDGVHGGNGAGNTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSE 282
Query: 76 RQIAIWFQNRRARWK 90
Q+ IWFQNRRA+WK
Sbjct: 283 VQVKIWFQNRRAKWK 297
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 120 (47.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A +L L RQI IWFQNRR +WK
Sbjct: 147 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 103 (41.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 37 KKKRL--NLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
+KKR Q LEK F L +R+ ++AR L L RQ+ IWFQNRR + K
Sbjct: 2 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 103 (41.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRAR 88
LEK F + RK +LA LGL RQ+ IWFQNRRA+
Sbjct: 16 LEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55
>FB|FBgn0004053 [details] [associations]
symbol:zen "zerknullt" species:7227 "Drosophila melanogaster"
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
[GO:0009950 "dorsal/ventral axis specification" evidence=TAS]
[GO:0007378 "amnioserosa formation" evidence=TAS] [GO:0010629
"negative regulation of gene expression" evidence=IDA] [GO:0048749
"compound eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 GO:GO:0003705
GO:GO:0010629 EMBL:AE001572 GO:GO:0048749 GO:GO:0009950 ChiTaRS:br
GO:GO:0007378 GeneTree:ENSGT00700000104161 EMBL:X68347
EMBL:BT028847 PIR:A43697 RefSeq:NP_476793.1 UniGene:Dm.27227
PDB:1KZ2 PDBsum:1KZ2 ProteinModelPortal:P09089 SMR:P09089
DIP:DIP-18255N IntAct:P09089 MINT:MINT-1547017 STRING:P09089
PRIDE:P09089 EnsemblMetazoa:FBtr0081670 GeneID:40828
KEGG:dme:Dmel_CG1046 CTD:40828 FlyBase:FBgn0004053 eggNOG:NOG237021
InParanoid:P09089 OMA:YRTRRIE OrthoDB:EOG4K3JC5 PhylomeDB:P09089
EvolutionaryTrace:P09089 GenomeRNAi:40828 NextBio:820800
Bgee:P09089 GermOnline:CG1046 Uniprot:P09089
Length = 353
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 11 VNDKCHEDH----HVHGDEDL----SDDGSQVGEKKKRLNLEQVKA--LEKSFELGNKLE 60
+ND C H HV DE+L + D +V K+ R V+ LE F+ L
Sbjct: 57 LNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLY 116
Query: 61 PERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKADNDSLQAQNK 120
R++++A+ L L RQ+ IWFQNRR ++K K ++ E + A A + Q+ ++
Sbjct: 117 RTRRIEIAQRLSLCERQVKIWFQNRRMKFK-KDIQGHRE---PKSNAKLAQPQAEQSAHR 172
Query: 121 KLHAELVSLKNKDSNNG 137
+ L+S ++D G
Sbjct: 173 GIVKRLMSY-SQDPREG 188
>UNIPROTKB|Q9C056 [details] [associations]
symbol:NKX6-2 "Homeobox protein Nkx-6.2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0022010
GO:GO:0031018 GO:GO:0000976 EMBL:CH471211 GO:GO:0021913
GO:GO:0045687 HSSP:P13297 EMBL:AL392043 GO:GO:0045686 GO:GO:0010455
GO:GO:0010454 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF184215
EMBL:BC101635 EMBL:BC104823 IPI:IPI00028161 RefSeq:NP_796374.1
UniGene:Hs.134013 ProteinModelPortal:Q9C056 SMR:Q9C056
STRING:Q9C056 PhosphoSite:Q9C056 DMDM:158564033 PRIDE:Q9C056
Ensembl:ENST00000368592 GeneID:84504 KEGG:hsa:84504 UCSC:uc001llr.2
CTD:84504 GeneCards:GC10M134598 HGNC:HGNC:19321 MIM:605955
neXtProt:NX_Q9C056 PharmGKB:PA134896334 InParanoid:Q9C056 KO:K09350
OMA:GPAGFKA PhylomeDB:Q9C056 GenomeRNAi:84504 NextBio:74300
Bgee:Q9C056 CleanEx:HS_NKX6-2 Genevestigator:Q9C056 Uniprot:Q9C056
Length = 277
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 142 LDKDGKKK-HSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 200
Query: 87 ARWKTKQLEKDYEVLKKQ 104
+W+ + + KKQ
Sbjct: 201 TKWRKRHAVEMASAKKKQ 218
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 206 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 265
Query: 88 RWK 90
+WK
Sbjct: 266 KWK 268
>ZFIN|ZDB-GENE-050913-153 [details] [associations]
symbol:barhl2 "BarH-like 2" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050913-153
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P10037
GeneTree:ENSGT00700000104206 KO:K09360 HOVERGEN:HBG050663
CTD:343472 OMA:ISVTMEH EMBL:BX004768 EMBL:AY145141 IPI:IPI00487796
RefSeq:NP_991303.1 UniGene:Dr.79590 SMR:Q6YI96 STRING:Q6YI96
Ensembl:ENSDART00000102661 GeneID:100001699 KEGG:dre:100001699
InParanoid:Q6YI96 NextBio:20785141 Uniprot:Q6YI96
Length = 364
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/105 (33%), Positives = 51/105 (48%)
Query: 14 KCHEDHHVHGDEDLSD--DGSQVGEKKKR-----LNLEQVKALEKSFELGNKLEPERKLQ 66
KC GD ++S D V KK R + Q+ LE+SFE L + ++
Sbjct: 182 KCLNGTKEEGDREISSSRDSPPVRSKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMD 241
Query: 67 LARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK--QFEALK 109
LA AL L Q+ W+QNRR +WK +Q E+L + + AL+
Sbjct: 242 LAAALNLTDTQVKTWYQNRRTKWK-RQTAVGLELLAEAGNYSALQ 285
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTK-QLEKDYEVLKK 103
Q LEK F + L R++++A AL L RQI IWFQNRR + K + Q K+ +K
Sbjct: 170 QTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEK 229
Query: 104 QFEALKA 110
Q +A KA
Sbjct: 230 QAQAQKA 236
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 208 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 267
Query: 88 RWK 90
+WK
Sbjct: 268 KWK 270
>UNIPROTKB|E1BNQ7 [details] [associations]
symbol:NKX6-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0045687
"positive regulation of glial cell differentiation" evidence=IEA]
[GO:0045686 "negative regulation of glial cell differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045666
GO:GO:0031018 GO:GO:0000976 GO:GO:0007224 GO:GO:0048709
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 CTD:4825 KO:K08030 OMA:TPLYPAY GO:GO:0021912
EMBL:DAAA02018306 IPI:IPI00696939 RefSeq:NP_001193167.1
UniGene:Bt.112406 Ensembl:ENSBTAT00000003266 GeneID:616211
KEGG:bta:616211 NextBio:20900018 Uniprot:E1BNQ7
Length = 366
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 228 LDKDGKRK-HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 286
Query: 87 ARWKTKQLEKDYEVLKKQ 104
+W+ K + KKQ
Sbjct: 287 TKWRKKHAAEMATAKKKQ 304
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 209 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 268
Query: 88 RWK 90
+WK
Sbjct: 269 KWK 271
>UNIPROTKB|P78426 [details] [associations]
symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA] [GO:0032024 "positive regulation of
insulin secretion" evidence=IEA] [GO:0035094 "response to nicotine"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0071345
"cellular response to cytokine stimulus" evidence=IEA] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0031018
"endocrine pancreas development" evidence=TAS] [GO:2000078
"positive regulation of type B pancreatic cell development"
evidence=ISS] [GO:0072560 "type B pancreatic cell maturation"
evidence=ISS] [GO:0051594 "detection of glucose" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0031016 "pancreas
development" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Reactome:REACT_111045
GO:GO:0051091 GO:GO:0042493 GO:GO:0008283 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0009887 GO:GO:0035094 GO:GO:0045666
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:2000078 GO:GO:0071345 GO:GO:0021913 GO:GO:0051594
GO:GO:0045687 GO:GO:0045686 EMBL:U66799 EMBL:U66797 EMBL:U66798
EMBL:AC096766 IPI:IPI00019774 RefSeq:NP_006159.2 UniGene:Hs.546270
ProteinModelPortal:P78426 SMR:P78426 STRING:P78426
PhosphoSite:P78426 DMDM:288558819 PRIDE:P78426 DNASU:4825
Ensembl:ENST00000295886 GeneID:4825 KEGG:hsa:4825 UCSC:uc003hpa.1
CTD:4825 GeneCards:GC04M085339 HGNC:HGNC:7839 HPA:HPA036774
MIM:602563 neXtProt:NX_P78426 PharmGKB:PA31646 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 InParanoid:P78426 KO:K08030
OMA:TPLYPAY OrthoDB:EOG4JT064 PhylomeDB:P78426 GenomeRNAi:4825
NextBio:18584 ArrayExpress:P78426 Bgee:P78426 CleanEx:HS_NKX6-1
Genevestigator:P78426 GermOnline:ENSG00000163623 GO:GO:0021912
GO:GO:0072560 Uniprot:P78426
Length = 367
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 27 LSDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRR 86
L DG + + + +Q+ ALEK+FE L + +LA +LG+ Q+ +WFQNRR
Sbjct: 230 LDKDGKRK-HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRR 288
Query: 87 ARWKTKQLEKDYEVLKKQ 104
+W+ K + KKQ
Sbjct: 289 TKWRKKHAAEMATAKKKQ 306
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 122 (48.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S +G + + +QV LEK F L R++++A L L RQ+ IWFQNRR
Sbjct: 216 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 275
Query: 88 RWK 90
+WK
Sbjct: 276 KWK 278
>UNIPROTKB|F1NDR4 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:AADN02014984 IPI:IPI00574330
Ensembl:ENSGALT00000025154 Uniprot:F1NDR4
Length = 330
Score = 122 (48.0 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 17 EDHHVHGDEDLSDDGSQVGEKKKRLNL---EQVKALEKSFELGNKLEPERKLQLARALGL 73
E+ G+E + G KKK + QV LE +F++ L + LA +L L
Sbjct: 145 EEEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHL 204
Query: 74 QPRQIAIWFQNRRARWKTKQLEKDYE 99
Q+ IWFQNRR +WK +QL D E
Sbjct: 205 TETQVKIWFQNRRNKWK-RQLAADLE 229
>UNIPROTKB|Q9DE09 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AF227921 IPI:IPI00596089 RefSeq:NP_990864.1
UniGene:Gga.14432 HSSP:P13297 ProteinModelPortal:Q9DE09
GeneID:396546 KEGG:gga:396546 CTD:3166 eggNOG:NOG241326
HOGENOM:HOG000231923 HOVERGEN:HBG031610 KO:K09349 OrthoDB:EOG434W7H
NextBio:20816582 Uniprot:Q9DE09
Length = 333
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 17 EDHHVHGDEDLSDDGSQVGEKKKRLNL---EQVKALEKSFELGNKLEPERKLQLARALGL 73
E+ G+E + G KKK + QV LE +F++ L + LA +L L
Sbjct: 181 EEEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAASLHL 240
Query: 74 QPRQIAIWFQNRRARWKTKQLEKDYE 99
Q+ IWFQNRR +WK +QL D E
Sbjct: 241 TETQVKIWFQNRRNKWK-RQLAADLE 265
>RGD|620726 [details] [associations]
symbol:Barhl2 "BarH-like homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001709 "cell fate determination" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=IEA;ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007399 "nervous system development" evidence=IDA] [GO:0030182
"neuron differentiation" evidence=IEA;ISO] [GO:0030516 "regulation
of axon extension" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045664 "regulation of neuron differentiation"
evidence=TAS] [GO:0045727 "positive regulation of translation"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:620726 GO:GO:0005634
GO:GO:0001764 GO:GO:0045664 GO:GO:0030182 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030516
GO:GO:0045727 GO:GO:0001709 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 KO:K09360 HOGENOM:HOG000231533 HOVERGEN:HBG050663
CTD:343472 OMA:ISVTMEH EMBL:AB004056 IPI:IPI00206550
RefSeq:NP_075245.1 UniGene:Rn.30005 ProteinModelPortal:O88181
SMR:O88181 STRING:O88181 Ensembl:ENSRNOT00000002887 GeneID:65050
KEGG:rno:65050 UCSC:RGD:620726 InParanoid:O88181 NextBio:613896
Genevestigator:O88181 GermOnline:ENSRNOG00000002117 Uniprot:O88181
Length = 384
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 3 KRSMSFSGVNDKCHEDHHVHGDEDL--SDDGSQVGEKKKR-----LNLEQVKALEKSFEL 55
KR S S + KCH GD ++ S + V KK R + Q+ LE+SFE
Sbjct: 194 KREDSQSDI--KCHGTKE-EGDREITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFER 250
Query: 56 GNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK--QFEALK 109
L + ++ LA AL L Q+ W+QNRR +WK +Q E+L + + AL+
Sbjct: 251 QKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK-RQTAVGLELLAEAGNYSALQ 305
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 121 (47.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S G + +K+ Q++ LE+ F + E++LQL+R L L RQ+ IWFQNRR
Sbjct: 218 SSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM 277
Query: 88 RWKTKQLEKD 97
K K++ +D
Sbjct: 278 --KEKKINRD 285
>UNIPROTKB|Q9NY43 [details] [associations]
symbol:BARHL2 "BarH-like 2 homeobox protein" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0030516 "regulation of axon
extension" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0030182 GO:GO:0043565
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0030516 GO:GO:0045727 GO:GO:0001709
eggNOG:NOG263484 KO:K09360 HOGENOM:HOG000231533 HOVERGEN:HBG050663
EMBL:AY338397 EMBL:BC126439 EMBL:BC126441 EMBL:AJ251753
IPI:IPI00059055 RefSeq:NP_064447.1 UniGene:Hs.451956
ProteinModelPortal:Q9NY43 SMR:Q9NY43 STRING:Q9NY43
PhosphoSite:Q9NY43 DMDM:47117915 PaxDb:Q9NY43 PRIDE:Q9NY43
Ensembl:ENST00000370445 GeneID:343472 KEGG:hsa:343472
UCSC:uc001dns.3 CTD:343472 GeneCards:GC01M091177 HGNC:HGNC:954
HPA:HPA028176 MIM:605212 neXtProt:NX_Q9NY43 PharmGKB:PA25258
InParanoid:Q9NY43 OMA:ISVTMEH OrthoDB:EOG4KH2VD BRENDA:3.1.30.1
GenomeRNAi:343472 NextBio:98538 Bgee:Q9NY43 CleanEx:HS_BARHL2
Genevestigator:Q9NY43 Uniprot:Q9NY43
Length = 387
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 3 KRSMSFSGVNDKCHEDHHVHGDEDL--SDDGSQVGEKKKR-----LNLEQVKALEKSFEL 55
KR S S + KCH GD ++ S + V KK R + Q+ LE+SFE
Sbjct: 197 KREDSQSDI--KCHGTKE-EGDREITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFER 253
Query: 56 GNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKK--QFEALK 109
L + ++ LA AL L Q+ W+QNRR +WK +Q E+L + + AL+
Sbjct: 254 QKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK-RQTAVGLELLAEAGNYSALQ 308
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 121 (47.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 28 SDDGSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRA 87
S G + +K+ Q++ LE+ F + E++LQL+R L L RQ+ IWFQNRR
Sbjct: 219 SSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM 278
Query: 88 RWKTKQLEKD 97
K K++ +D
Sbjct: 279 --KEKKINRD 286
>UNIPROTKB|E1BHR6 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
Length = 222
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
Q LEK F L R++++A L L RQI IWFQNRR +WK K E L
Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>UNIPROTKB|J9P833 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
Ensembl:ENSCAFT00000049441 Uniprot:J9P833
Length = 222
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
Q LEK F L R++++A L L RQI IWFQNRR +WK K E L
Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>UNIPROTKB|Q00444 [details] [associations]
symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
GermOnline:ENSG00000172789 Uniprot:Q00444
Length = 222
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
Q LEK F L R++++A L L RQI IWFQNRR +WK K E L
Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>UNIPROTKB|I3LRP3 [details] [associations]
symbol:LOC100627840 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
KEGG:ssc:100627840 Uniprot:I3LRP3
Length = 222
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
Q LEK F L R++++A L L RQI IWFQNRR +WK K E L
Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>MGI|MGI:96196 [details] [associations]
symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
GermOnline:ENSMUSG00000022485 Uniprot:P32043
Length = 222
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
Q LEK F L R++++A L L RQI IWFQNRR +WK K E L
Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>RGD|1307584 [details] [associations]
symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
NextBio:669109 Uniprot:D3ZP88
Length = 222
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVL 101
Q LEK F L R++++A L L RQI IWFQNRR +WK K E L
Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 102 (41.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 49 LEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRAR 88
LEK F + RK +LA LGL RQ+ IWFQNRRA+
Sbjct: 22 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 61
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 121 (47.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 206 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
Query: 91 TKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAE 125
KD+++ + + ++ SL Q K +
Sbjct: 266 -----KDHKLPNTKMRS--SNQPSLGQQQAKAQTQ 293
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 121 (47.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 31 GSQVGEKKKRLNLEQVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
G + + +QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 206 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
Query: 91 TKQLEKDYEVLKKQFEALKADNDSLQAQNKKLHAE 125
KD+++ + + ++ SL Q K +
Sbjct: 266 -----KDHKLPNTKMRS--SNQPSLGQQQAKAQTQ 293
>UNIPROTKB|Q14774 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0001889 "liver development" evidence=IEA] [GO:0007519 "skeletal
muscle tissue development" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0045627
"positive regulation of T-helper 1 cell differentiation"
evidence=IEA] [GO:0045629 "negative regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0046622 "positive regulation of
organ growth" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=TAS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030154 Pathway_Interaction_DB:il12_2pathway EMBL:CH471100
GO:GO:0008284 GO:GO:0043565 GO:GO:0001889 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 CTD:3142
eggNOG:NOG331357 HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339
OrthoDB:EOG473PRM EMBL:M60721 EMBL:AF217621 EMBL:AK313298
EMBL:AB208812 EMBL:AL445423 EMBL:BC007294 EMBL:BC033808 EMBL:U14328
EMBL:U14325 EMBL:U14326 EMBL:U14327 EMBL:S56767 IPI:IPI00292164
PIR:A55180 RefSeq:NP_068777.1 UniGene:Hs.74870
ProteinModelPortal:Q14774 SMR:Q14774 STRING:Q14774
PhosphoSite:Q14774 DMDM:160291960 PaxDb:Q14774 PRIDE:Q14774
DNASU:3142 Ensembl:ENST00000366903 GeneID:3142 KEGG:hsa:3142
UCSC:uc001hmv.4 GeneCards:GC01P221052 H-InvDB:HIX0001609
HGNC:HGNC:4978 HPA:HPA005968 MIM:142995 neXtProt:NX_Q14774
PharmGKB:PA162391017 InParanoid:Q14774 PhylomeDB:Q14774
GenomeRNAi:3142 NextBio:12460 ArrayExpress:Q14774 Bgee:Q14774
CleanEx:HS_HLX Genevestigator:Q14774 GermOnline:ENSG00000136630
Uniprot:Q14774
Length = 488
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 42 NLEQVKALEKSFELGNKL-EPERKLQLARALGLQPRQIAIWFQNRRARWK-TK----QLE 95
NL++ K LEK FE+ + +P+RK QLA LGL Q+ +WFQNRR +W+ +K Q +
Sbjct: 285 NLQR-KGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKD 342
Query: 96 KDYEVLKKQFE-ALKADNDSLQAQNKKLHAELVSLKNKDSNN 136
KD E +K A AD + + + E S ++ DS +
Sbjct: 343 KDKEAGEKPSGGAPAADGEQDERSPSRSEGEAES-ESSDSES 383
>FB|FBgn0264005 [details] [associations]
symbol:Hmx "H6-like-homeobox" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0045892
GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09349
GeneTree:ENSGT00700000104333 eggNOG:NOG312519 EMBL:BT028828
EMBL:BT028860 EMBL:BT030410 RefSeq:NP_732244.3 UniGene:Dm.27474
ProteinModelPortal:Q9VEI9 SMR:Q9VEI9 STRING:Q9VEI9
EnsemblMetazoa:FBtr0330385 GeneID:42110 KEGG:dme:Dmel_CG34419
UCSC:CG34419-RC CTD:42110 FlyBase:FBgn0085448 InParanoid:Q9VEI9
OMA:KSHEDEG OrthoDB:EOG4FFBJG PhylomeDB:Q9VEI9 GenomeRNAi:42110
NextBio:827209 Bgee:Q9VEI9 Uniprot:Q9VEI9
Length = 592
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/88 (38%), Positives = 45/88 (51%)
Query: 17 EDHHVHGDEDLSD---DGSQVGEKKKR--LNLEQVKALEKSFELGNKLEPERKLQLARAL 71
ED G D S DG+ +KK R + QV LE +F+L L + LA +L
Sbjct: 446 EDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASL 505
Query: 72 GLQPRQIAIWFQNRRARWKTKQLEKDYE 99
L Q+ IWFQNRR +WK +QL + E
Sbjct: 506 RLTETQVKIWFQNRRNKWK-RQLAAELE 532
>UNIPROTKB|F1NMG1 [details] [associations]
symbol:F1NMG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
Length = 228
Score = 118 (46.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
Q LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 164 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 209
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 118 (46.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R++++A AL L RQI IWFQNRR +WK + ++
Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 191
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 118 (46.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R++++A AL L RQI IWFQNRR +WK + ++
Sbjct: 141 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 25 EDLSDDGSQVGEKKKRLNLE--QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWF 82
ED + S +KKR Q++ LE+ F + E++LQL+R L L RQ+ IWF
Sbjct: 200 EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 259
Query: 83 QNRRARWKTKQLEKD 97
QNRR K K++ +D
Sbjct: 260 QNRRM--KEKKINRD 272
>RGD|620609 [details] [associations]
symbol:Hoxa5 "homeo box A5" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 118 (46.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
Q LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 185 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 230
>UNIPROTKB|P52949 [details] [associations]
symbol:Hoxa5 "Homeobox protein Hox-A5" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 118 (46.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWK 90
Q LEK F L R++++A AL L RQI IWFQNRR +WK
Sbjct: 185 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 230
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 118 (46.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 45 QVKALEKSFELGNKLEPERKLQLARALGLQPRQIAIWFQNRRARWKTKQLEK 96
Q LEK F L R++++A AL L RQI IWFQNRR +WK + ++
Sbjct: 141 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
WARNING: HSPs involving 380 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.127 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 236 0.00089 113 3 11 23 0.46 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 630
No. of states in DFA: 604 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.11u 0.08s 28.19t Elapsed: 00:00:01
Total cpu time: 28.13u 0.08s 28.21t Elapsed: 00:00:01
Start: Sat May 11 09:22:06 2013 End: Sat May 11 09:22:07 2013
WARNINGS ISSUED: 2