BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041878
(773 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 169/341 (49%), Gaps = 28/341 (8%)
Query: 105 GRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPN 164
G+I +S L L L N L+G +P SLG L LR + L+ N L G IP +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 165 LQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLS 224
L+TL L N L G IP L+N T G IP + RL +L++L L +N+ S
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 225 GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSL----GKL----------------G 264
G++P G L +L+L+ NL GTIP ++ GK+ G
Sbjct: 525 GNIPAELG-----DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 579
Query: 265 LLQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENN 322
+ +E + N + G ++L +LS +++ GG TF N S++ L++ N
Sbjct: 580 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 639
Query: 323 RLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLAS 382
L IP+ + + L +LNL +N G IP+ +G++ G+N LDLS N G I ++++
Sbjct: 640 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Query: 383 LANLTSFNVSYNNLSGSVPPLLS-KKFNSSSFVGNLQLCGY 422
L LT ++S NNLSG +P + + F + F+ N LCGY
Sbjct: 700 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 740
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 158/346 (45%), Gaps = 33/346 (9%)
Query: 91 GQVIAIQ---LPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLP--NLRGVY 145
G A+Q + +L G S IS L+ L++ N GP+P LP +L+ +
Sbjct: 217 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP----LPLKSLQYLS 272
Query: 146 LFNNRLSGSIPPSI-GNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSIP 204
L N+ +G IP + G C L LDLS N GA+PP + + G +P
Sbjct: 273 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Query: 205 L-SLTRLPSLSVLALQHNNLSGSVP-----------------NNWG-----VLAGNKSYQ 241
+ +L ++ L VL L N SG +P NN+ L N
Sbjct: 333 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 392
Query: 242 LQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIG 301
LQ L L +N G IP +L L + LS N + G IP LG LSKL+ L L N +
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 302 GSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
G P + +L +L L+ N L +IP GL NL ++L NN+ G IP+ IG +
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSKK 407
+ L LS N F+G I L +L +++ N +G++P + K+
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 167/372 (44%), Gaps = 37/372 (9%)
Query: 77 GACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLG 136
GA GW + G++ + + ++ G + +S+ L L + N + +P+ LG
Sbjct: 162 GANVVGWV-LSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LG 217
Query: 137 FLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXX 196
L+ + + N+LSG +I C L+ L++S+N +G IPP S
Sbjct: 218 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--LQYLSLAE 275
Query: 197 XXXXGSIPLSLT-RLPSLSVLALQHNNLSGSVPNNWGV-------------LAGN----- 237
G IP L+ +L+ L L N+ G+VP +G +G
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 335
Query: 238 --KSYQLQFLNLDHNLIAGTIPVSLGKLGL-LQEISLSHNKIVGPIPDELGKLSK--LQK 292
K L+ L+L N +G +P SL L L + LS N GPI L + K LQ+
Sbjct: 336 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 395
Query: 293 LDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHI 352
L L N G P T +N + LVSL+L N L IP L L L L L N +G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 353 PETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSK------ 406
P+ + + + L L ND TGEI L++ NL ++S N L+G +P + +
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 407 -KFNSSSFVGNL 417
K +++SF GN+
Sbjct: 516 LKLSNNSFSGNI 527
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 141 LRGVYLFNNRLSGSIPP--SIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXX 198
L + L N LSG + S+G+C L+ L++S+N L P ++
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--DFPGKVSGG------------ 144
Query: 199 XXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPV 258
+L SL VL L N++SG+ N G + + +L+ L + N I+G + V
Sbjct: 145 ---------LKLNSLEVLDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDVDV 193
Query: 259 SLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLN 318
S + L+ + +S N IP LG S LQ LD+S N + G F + T L LN
Sbjct: 194 S--RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 250
Query: 319 LENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI-GNISGINQLDLSENDFTGEIS 377
+ +N+ IP L++L L+L N+F G IP+ + G + LDLS N F G +
Sbjct: 251 ISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Query: 378 PSLASLANLTSFNVSYNNLSGSVP 401
P S + L S +S NN SG +P
Sbjct: 309 PFFGSCSLLESLALSSNNFSGELP 332
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 232 GVLAGNK-SYQLQFLNLDHNLIAG--TIPVSLGKLGLLQEISLSHNKIVGPIPDELG-KL 287
G ++G K S L L+L N ++G T SLG L+ +++S N + P G KL
Sbjct: 88 GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKL 147
Query: 288 SKLQKLDLSYNAIGGSFPVTFT---NITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLK 344
+ L+ LDLS N+I G+ V + L L + N++ + + R NL L++
Sbjct: 148 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVS 205
Query: 345 NNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+N F IP +G+ S + LD+S N +G+ S ++++ L N+S N G +PPL
Sbjct: 206 SNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 263
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNR 150
G ++ + + + L G I ++I + L L+L N ++G +P +G L L + L +N+
Sbjct: 629 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 151 LSGSIPPSIGNCPNLQTLDLSNNALIGAIP 180
L G IP ++ L +DLSNN L G IP
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 12/235 (5%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKG-QKEFEAEAAAIGKIHHPNLLALRAYY 600
I+G+ +G YK L DG VAVKRL+E+ T+G + +F+ E I H NLL LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETI--VNWATRMSIAIGIARGLNYLH--VEEN 656
+ P E+LLV+ +M GS+AS L R PE+ ++W R IA+G ARGL YLH +
Sbjct: 97 MTPT-ERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+IH ++ ++N+LLDE+ + DFGL++LM +G+ APE ++
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 717 KTDVYSLGVIILELLTGKSP---GEPMNGMD--LPQWVASIVKEEWTNEVFDLEL 766
KTDV+ GV++LEL+TG+ N D L WV ++KE+ + D++L
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 269
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 169/341 (49%), Gaps = 28/341 (8%)
Query: 105 GRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPN 164
G+I +S L L L N L+G +P SLG L LR + L+ N L G IP +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 165 LQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLS 224
L+TL L N L G IP L+N T G IP + RL +L++L L +N+ S
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 225 GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSL----GKL----------------G 264
G++P G L +L+L+ NL GTIP ++ GK+ G
Sbjct: 528 GNIPAELG-----DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582
Query: 265 LLQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENN 322
+ +E + N + G ++L +LS +++ GG TF N S++ L++ N
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 642
Query: 323 RLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLAS 382
L IP+ + + L +LNL +N G IP+ +G++ G+N LDLS N G I ++++
Sbjct: 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 383 LANLTSFNVSYNNLSGSVPPLLS-KKFNSSSFVGNLQLCGY 422
L LT ++S NNLSG +P + + F + F+ N LCGY
Sbjct: 703 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 158/346 (45%), Gaps = 33/346 (9%)
Query: 91 GQVIAIQ---LPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLP--NLRGVY 145
G A+Q + +L G S IS L+ L++ N GP+P LP +L+ +
Sbjct: 220 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP----LPLKSLQYLS 275
Query: 146 LFNNRLSGSIPPSI-GNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSIP 204
L N+ +G IP + G C L LDLS N GA+PP + + G +P
Sbjct: 276 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Query: 205 L-SLTRLPSLSVLALQHNNLSGSVP-----------------NNWG-----VLAGNKSYQ 241
+ +L ++ L VL L N SG +P NN+ L N
Sbjct: 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395
Query: 242 LQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIG 301
LQ L L +N G IP +L L + LS N + G IP LG LSKL+ L L N +
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 302 GSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
G P + +L +L L+ N L +IP GL NL ++L NN+ G IP+ IG +
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSKK 407
+ L LS N F+G I L +L +++ N +G++P + K+
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 167/372 (44%), Gaps = 37/372 (9%)
Query: 77 GACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLG 136
GA GW + G++ + + ++ G + +S+ L L + N + +P+ LG
Sbjct: 165 GANVVGWV-LSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LG 220
Query: 137 FLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXX 196
L+ + + N+LSG +I C L+ L++S+N +G IPP S
Sbjct: 221 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--LQYLSLAE 278
Query: 197 XXXXGSIPLSLT-RLPSLSVLALQHNNLSGSVPNNWGV-------------LAGN----- 237
G IP L+ +L+ L L N+ G+VP +G +G
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 338
Query: 238 --KSYQLQFLNLDHNLIAGTIPVSLGKLGL-LQEISLSHNKIVGPIPDELGKLSK--LQK 292
K L+ L+L N +G +P SL L L + LS N GPI L + K LQ+
Sbjct: 339 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398
Query: 293 LDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHI 352
L L N G P T +N + LVSL+L N L IP L L L L L N +G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 353 PETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSK------ 406
P+ + + + L L ND TGEI L++ NL ++S N L+G +P + +
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 407 -KFNSSSFVGNL 417
K +++SF GN+
Sbjct: 519 LKLSNNSFSGNI 530
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 145/336 (43%), Gaps = 77/336 (22%)
Query: 141 LRGVYLFNNRLSGSIPP--SIGNCPNLQTLDLSNNALI--GAIPPSLANSTXXXXXXXXX 196
L + L N LSG + S+G+C L+ L++S+N L G + L ++
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161
Query: 197 XXXXGSI------------------------PLSLTRLPSLSVLALQHNNLSGSVP--NN 230
++ + ++R +L L + NN S +P +
Sbjct: 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGD 221
Query: 231 WGVL-----AGNK-----------SYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHN 274
L +GNK +L+ LN+ N G IP L LQ +SL+ N
Sbjct: 222 CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAEN 279
Query: 275 KIVGPIPDEL-GKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIP-EGL 332
K G IPD L G L LDLS N G+ P F + + L SL L +N ++P + L
Sbjct: 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 339
Query: 333 ERLQNLTVLNLKNNQFKGHIPETIGNISG---------------------------INQL 365
+++ L VL+L N+F G +PE++ N+S + +L
Sbjct: 340 LKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399
Query: 366 DLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
L N FTG+I P+L++ + L S ++S+N LSG++P
Sbjct: 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 232 GVLAGNK-SYQLQFLNLDHNLIAG--TIPVSLGKLGLLQEISLSHNKIVGPIPDELG-KL 287
G ++G K S L L+L N ++G T SLG L+ +++S N + P G KL
Sbjct: 91 GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKL 150
Query: 288 SKLQKLDLSYNAIGGSFPVTFT---NITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLK 344
+ L+ LDLS N+I G+ V + L L + N++ + + R NL L++
Sbjct: 151 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVS 208
Query: 345 NNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+N F IP +G+ S + LD+S N +G+ S ++++ L N+S N G +PPL
Sbjct: 209 SNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNR 150
G ++ + + + L G I ++I + L L+L N ++G +P +G L L + L +N+
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 151 LSGSIPPSIGNCPNLQTLDLSNNALIGAIP 180
L G IP ++ L +DLSNN L G IP
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 12/235 (5%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKG-QKEFEAEAAAIGKIHHPNLLALRAYY 600
I+G+ +G YK L DG+ VAVKRL+E+ +G + +F+ E I H NLL LR +
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETI--VNWATRMSIAIGIARGLNYLH--VEEN 656
+ P E+LLV+ +M GS+AS L R PE+ ++W R IA+G ARGL YLH +
Sbjct: 105 MTPT-ERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+IH ++ ++N+LLDE+ + DFGL++LM +G+ APE ++
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 717 KTDVYSLGVIILELLTGKSP---GEPMNGMD--LPQWVASIVKEEWTNEVFDLEL 766
KTDV+ GV++LEL+TG+ N D L WV ++KE+ + D++L
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 277
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
++G +G YK L DG++VA+KR ++++G +EFE E + HP+L++L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG-FC 104
Query: 602 GPKGEKLLVFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ E +L++ +M G+L L+ P ++W R+ I IG ARGL+YLH +IH
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHR 163
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRL-MXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S N+LLDE P+I DFG+S+ LGY PE K+D
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 720 VYSLGVIILELLTGKSP---GEPMNGMDLPQWVA 750
VYS GV++ E+L +S P ++L +W
Sbjct: 224 VYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
++G +G YK L DG++VA+KR ++++G +EFE E + HP+L++L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG-FC 104
Query: 602 GPKGEKLLVFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ E +L++ +M G+L L+ P ++W R+ I IG ARGL+YLH +IH
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHR 163
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRL-MXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S N+LLDE P+I DFG+S+ LGY PE K+D
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 720 VYSLGVIILELLTGKSP---GEPMNGMDLPQWVA 750
VYS GV++ E+L +S P ++L +W
Sbjct: 224 VYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 23/240 (9%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQK--EFEAEAAAIGKIHHPNLLALRA 598
E +G ++GT ++A GS+VAVK L E+ ++ EF E A + ++ HPN++
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH-VEENM 657
P + V +++ +GSL LH G ++ R+S+A +A+G+NYLH +
Sbjct: 102 AVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
+H NL S N+L+D+K ++ DFGLSRL + APE+ + + +N K
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEK 219
Query: 718 TDVYSLGVIILELLTGKSP-------------GEPMNGMDLPQ----WVASIVKEEWTNE 760
+DVYS GVI+ EL T + P G +++P+ VA+I++ WTNE
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNE 279
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 128/240 (53%), Gaps = 23/240 (9%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQK--EFEAEAAAIGKIHHPNLLALRA 598
E +G ++GT ++A GS+VAVK L E+ ++ EF E A + ++ HPN++
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH-VEENM 657
P + V +++ +GSL LH G ++ R+S+A +A+G+NYLH +
Sbjct: 102 AVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
+H +L S N+L+D+K ++ DFGLSRL + APE+ + + +N K
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTP-EWMAPEVLRDEPSNEK 219
Query: 718 TDVYSLGVIILELLTGKSP-------------GEPMNGMDLPQ----WVASIVKEEWTNE 760
+DVYS GVI+ EL T + P G +++P+ VA+I++ WTNE
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNE 279
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLRE----KTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
MG+ +G YK + + + VAVK+L T + +++F+ E + K H NL+ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 599 YYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G+ L LV+ +MP GSL L ++W R IA G A G+N+LH E +
Sbjct: 98 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH-ENHH 154
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
IH ++ S+N+LLDE +I+DFGL+R Y APE L+ T
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE--ALRGEIT 212
Query: 717 -KTDVYSLGVIILELLTG 733
K+D+YS GV++LE++TG
Sbjct: 213 PKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 107/198 (54%), Gaps = 13/198 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLRE----KTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
MG+ +G YK + + + VAVK+L T + +++F+ E + K H NL+ L
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 599 YYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G+ L LV+ +MP GSL L ++W R IA G A G+N+LH E +
Sbjct: 98 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH-ENHH 154
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
IH ++ S+N+LLDE +I+DFGL+R Y APE L+ T
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE--ALRGEIT 212
Query: 717 -KTDVYSLGVIILELLTG 733
K+D+YS GV++LE++TG
Sbjct: 213 PKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLRE----KTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
MG+ +G YK + + + VAVK+L T + +++F+ E + K H NL+ L
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 599 YYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G+ L LV+ +MP GSL L ++W R IA G A G+N+LH E +
Sbjct: 92 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH-ENHH 148
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
IH ++ S+N+LLDE +I+DFGL+R Y APE +
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITP 207
Query: 717 KTDVYSLGVIILELLTG 733
K+D+YS GV++LE++TG
Sbjct: 208 KSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 544 GKSTYGTAYKATLEDGSEVAVKRLRE----KTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
G+ +G YK + + + VAVK+L T + +++F+ E K H NL+ L +
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 600 YLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G+ L LV+ + P GSL L ++W R IA G A G+N+LH E + I
Sbjct: 90 --SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH-ENHHI 146
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANTK 717
H ++ S+N+LLDE +I+DFGL+R Y APE + K
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPK 205
Query: 718 TDVYSLGVIILELLTG 733
+D+YS GV++LE++TG
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 110/226 (48%), Gaps = 27/226 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLR----EKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
EI+G +G Y+A G EVAVK R E ++ + EA + HPN++AL
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVE 654
R L + LV +F G L L + P+ +VNWA + IARG+NYLH E
Sbjct: 72 RGVCLK-EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDE 124
Query: 655 E--NMIHGNLTSSNVLLDEKTNP--------RIADFGLSRLMXXXXXXXXXXXXXXLGYR 704
+IH +L SSN+L+ +K +I DFGL+R +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAWM 181
Query: 705 APELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVA 750
APE+ + + +DV+S GV++ ELLTG+ P ++G+ + VA
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 157/375 (41%), Gaps = 78/375 (20%)
Query: 50 DYQSLRAIKHDLIDPHGFLRSWNDSGVGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISE 109
D Q+L IK DL +P L SW + C+ W G+ C +
Sbjct: 7 DKQALLQIKKDLGNPTT-LSSWLPT-TDCCNRTWLGVLC--------------------D 44
Query: 110 KISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLD 169
+Q + + L L L P P IP S+ N P L L
Sbjct: 45 TDTQTYRVNNLDLSGLNLPKPYP----------------------IPSSLANLPYLNFLY 82
Query: 170 LSN-NALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVP 228
+ N L+G IPP++A +L L L + H N+SG++P
Sbjct: 83 IGGINNLVGPIPPAIA------------------------KLTQLHYLYITHTNVSGAIP 118
Query: 229 NNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLS 288
+ L+ K+ L L+ +N ++GT+P S+ L L I+ N+I G IPD G S
Sbjct: 119 D---FLSQIKT--LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS 173
Query: 289 KL-QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQ 347
KL + +S N + G P TF N+ +L ++L N L +N ++L N
Sbjct: 174 KLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232
Query: 348 FKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLS-K 406
+ + +G +N LDL N G + L L L S NVS+NNL G +P + +
Sbjct: 233 LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ 291
Query: 407 KFNSSSFVGNLQLCG 421
+F+ S++ N LCG
Sbjct: 292 RFDVSAYANNKCLCG 306
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 12/232 (5%)
Query: 529 LFTADDLLCATAEIMGKSTYGTAYKATLEDGSE----VAVKRLREKTTKGQKE-FEAEAA 583
L + ++ + ++GK +G Y D ++ A+K L T Q E F E
Sbjct: 15 LIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL 74
Query: 584 AIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIG 643
+ ++HPN+LAL L P+G ++ +M G L F+ R P+ +S +
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQ 132
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLG 702
+ARG+ YL E+ +H +L + N +LDE ++ADFGL+R ++ L
Sbjct: 133 VARGMEYL-AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 703 YRAPELSKLKNAN--TKTDVYSLGVIILELLT-GKSPGEPMNGMDLPQWVAS 751
+ L L+ TK+DV+S GV++ ELLT G P ++ DL ++A
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 171
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 265
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 147
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 241
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 152
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 170
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 264
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 144
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 238
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 152
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 150
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 244
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ YL +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL-ASK 149
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 24/251 (9%)
Query: 516 EMGGKLVHFD----GPFLFTA--------DDLLCATAEIMGKSTYGTAYKATL--EDGSE 561
MG VH D P L A L+ E++G+ +G Y TL DG +
Sbjct: 4 HMGSNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKK 63
Query: 562 V--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGS 618
+ AVK L T G+ +F E + HPN+L+L L +G L+V +M G
Sbjct: 64 IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD 123
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L +F+ V + + +A+G+ +L + +H +L + N +LDEK ++A
Sbjct: 124 LRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASKKFVHRDLAARNCMLDEKFTVKVA 180
Query: 679 DFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS 735
DFGL+R M + + A E + + TK+DV+S GV++ EL+T +
Sbjct: 181 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 240
Query: 736 PGEP-MNGMDL 745
P P +N D+
Sbjct: 241 PPYPDVNTFDI 251
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ +L +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASK 150
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 244
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ +L +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASK 152
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ +L +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASK 152
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDL 745
TK+DV+S GV++ EL+T +P P +N D+
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 246
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ +L +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASK 153
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDLPQWV 749
TK+DV+S GV++ EL+T +P P +N D+ ++
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ +L +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASK 153
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDLPQWV 749
TK+DV+S GV++ EL+T +P P +N D+ ++
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 541 EIMGKSTYGTAYKATL--EDGSEV--AVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLA 595
E++G+ +G Y TL DG ++ AVK L T G+ +F E + HPN+L+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L L +G L+V +M G L +F+ V + + +A+G+ +L +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL-ASK 211
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX---LGYRAPELSKLK 712
+H +L + N +LDEK ++ADFGL+R M + + A E + +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEP-MNGMDLPQWV 749
TK+DV+S GV++ EL+T +P P +N D+ ++
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Query: 513 SGGEMGGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATLEDGS-EVAVKRLREKT 571
SG ++G + ++F + + +G YG Y + S VAVK L+E T
Sbjct: 10 SGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDT 69
Query: 572 TKGQKEFEAEAAAIGKIHHPNLLALRAYY-LGPKGEKLLVFDFMPKGSLASFLHARGPET 630
+ + EF EAA + +I HPNL+ L L P +V ++MP G+L +L E
Sbjct: 70 MEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPF--YIVTEYMPYGNLLDYLRECNREE 126
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
+ + +A I+ + YL ++N IH +L + N L+ E ++ADFGLSRLM
Sbjct: 127 VTA-VVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT 184
Query: 691 XXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
+ + APE + K+DV++ GV++ E+ T G S P G+DL Q
Sbjct: 185 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS---PYPGIDLSQ 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 279
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 337
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H NL + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 398 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 424
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 80
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 225
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 321
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 379
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H NL + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 440 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 466
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 76
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 134
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 195 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 221
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 75
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 75
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 80
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 225
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 88
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 146
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 207 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 77
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 196 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 222
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 79
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 137
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 198 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 80
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 80
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 77
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 196 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 222
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 76
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 134
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 195 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 221
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 77
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + VN + +A I+ + YL ++N I
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLE-KKNFI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 196 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 282
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 340
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H NL + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 401 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 427
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 75
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 75
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 220
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 529 LFTADDLLCATAEIMGKSTYGTAYKATLEDGSEVAV-KRLREKTTKGQKEFEAEAAAIGK 587
+F DL+ E++GK +G A K T + EV V K L + Q+ F E +
Sbjct: 6 IFRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 588 IHHPNLLALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+ HPN+L K ++L + +++ G+L + + ++ W+ R+S A IA
Sbjct: 64 LEHPNVLKFIGVLY--KDKRLNFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIAS 119
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXX----------XXXX 696
G+ YLH N+IH +L S N L+ E N +ADFGL+RLM
Sbjct: 120 GMAYLH-SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 697 XXXXLG---YRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739
+G + APE+ ++ + K DV+S G+++ E++ G+ +P
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADP 223
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 75
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 75
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 194 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 80
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV++ GV++ E+ T G S P G+DL Q
Sbjct: 199 DVWAFGVLLWEIATYGMS---PYPGIDLSQ 225
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-----VAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNL 593
+++G +GT YK E VA+K L E T K EF EA + + HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLN 649
+ L L P + LV MP G L ++H G + ++NW + IA+G+
Sbjct: 80 VRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMM 131
Query: 650 YLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMX-XXXXXXXXXXXXXLGYRAPEL 708
YL E ++H +L + NVL+ + +I DFGL+RL+ + + A E
Sbjct: 132 YLE-ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV I EL+T G+P +G+
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFG--GKPYDGI 223
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LHA ET + IA ARG++YLH + ++IH +L
Sbjct: 80 P--QLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDL 134
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXX-XXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ +++++N ++
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 195 DVYAFGIVLYELMTGQLPYSNINNRD 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-----VAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNL 593
+++G +GT YK E VA+K L E T K EF EA + + HP+L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLN 649
+ L L P + LV MP G L ++H G + ++NW + IA+G+
Sbjct: 103 VRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMM 154
Query: 650 YLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMX-XXXXXXXXXXXXXLGYRAPEL 708
YL E ++H +L + NVL+ + +I DFGL+RL+ + + A E
Sbjct: 155 YLE-ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV I EL+T G+P +G+
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFG--GKPYDGI 246
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + +VA+K +RE +++F EA + K+ HP L+ L L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 72
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ LVF+FM G L+ +L R + T + + + + G+ YL E ++IH +L
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EASVIHRDL 129
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
+ N L+ E +++DFG++R + + + +PE+ ++K+DV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 723 LGVIILELLT-GKSPGE 738
GV++ E+ + GK P E
Sbjct: 190 FGVLMWEVFSEGKIPYE 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 14/223 (6%)
Query: 531 TADDLLCATAEI-----MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAI 585
ADD +I +G ++GT YK V + + T + + F+ E +
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 586 GKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIA 645
K H N+L Y P + +V + SL LHA ET + IA A
Sbjct: 75 RKTRHVNILLFMGYSTAP--QLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTA 130
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGL-SRLMXXXXXXXXXXXXXXLGYR 704
RG++YLH +++IH +L S+N+ L E +I DFGL + + +
Sbjct: 131 RGMDYLHA-KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 705 APELSKLKNANT---KTDVYSLGVIILELLTGKSPGEPMNGMD 744
APE+ +++++N ++DVY+ G+++ EL+TG+ P +N D
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 73
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 719 DVYSLGVIILELLT-GKSP 736
DV++ GV++ E+ T G SP
Sbjct: 192 DVWAFGVLLWEIATYGMSP 210
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + +VA+K +RE +++F EA + K+ HP L+ L L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 75
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ LVF+FM G L+ +L R + T + + + + G+ YL E +IH +L
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDL 132
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
+ N L+ E +++DFG++R + + + +PE+ ++K+DV+S
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 723 LGVIILELLT-GKSPGE 738
GV++ E+ + GK P E
Sbjct: 193 FGVLMWEVFSEGKIPYE 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 532 ADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHP 591
A +++ +T +G ++GT YK V + ++ + T + + F E A + K H
Sbjct: 35 ASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N+L Y K +V + SL LH + ET + IA A+G++YL
Sbjct: 93 NILLFMGYM--TKDNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYL 148
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX-XXXLGYRAPELSK 710
H +N+IH ++ S+N+ L E +I DFGL+ + + + APE+ +
Sbjct: 149 HA-KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 711 LKNANT---KTDVYSLGVIILELLTGKSPGEPMNGMD 744
+++ N ++DVYS G+++ EL+TG+ P +N D
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + +VA+K +RE +++F EA + K+ HP L+ L L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 70
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ LVF+FM G L+ +L R + T + + + + G+ YL E +IH +L
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDL 127
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
+ N L+ E +++DFG++R + + + +PE+ ++K+DV+S
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 723 LGVIILELLT-GKSPGE 738
GV++ E+ + GK P E
Sbjct: 188 FGVLMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + +VA+K +RE +++F EA + K+ HP L+ L L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 72
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ LVF+FM G L+ +L R + T + + + + G+ YL E +IH +L
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDL 129
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
+ N L+ E +++DFG++R + + + +PE+ ++K+DV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 723 LGVIILELLT-GKSPGE 738
GV++ E+ + GK P E
Sbjct: 190 FGVLMWEVFSEGKIPYE 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
+ +GK +G G++VAVK ++ T + F AEA+ + ++ H NL+ L
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ KG +V ++M KGSL +L +RG +++ + ++ + + YL N +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHR 126
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L + NVL+ E +++DFGL++ + + APE + K +TK+DV
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 721 YSLGVIILELLT-GKSP 736
+S G+++ E+ + G+ P
Sbjct: 183 WSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
+ +GK +G G++VAVK ++ T + F AEA+ + ++ H NL+ L
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ KG +V ++M KGSL +L +RG +++ + ++ + + YL N +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHR 141
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L + NVL+ E +++DFGL++ + + APE + K +TK+DV
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 721 YSLGVIILELLT-GKSP 736
+S G+++ E+ + G+ P
Sbjct: 198 WSFGILLWEIYSFGRVP 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
+ +GK +G G++VAVK ++ T + F AEA+ + ++ H NL+ L
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ KG +V ++M KGSL +L +RG +++ + ++ + + YL N +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHR 313
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L + NVL+ E +++DFGL++ + + APE + K +TK+DV
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 721 YSLGVIILELLT-GKSP 736
+S G+++ E+ + G+ P
Sbjct: 370 WSFGILLWEIYSFGRVP 386
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 531 TADDLLCATAEI-----MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAI 585
++DD +I +G ++GT YK V + + T + + F+ E +
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 586 GKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIA 645
K H N+L Y P + +V + SL LHA ET + IA A
Sbjct: 75 RKTRHVNILLFMGYSTKP--QLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTA 130
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGL-SRLMXXXXXXXXXXXXXXLGYR 704
RG++YLH + ++IH +L S+N+ L E +I DFGL + + +
Sbjct: 131 RGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 705 APELSKLKNANT---KTDVYSLGVIILELLTGKSPGEPMNGMD 744
APE+ +++++N ++DVY+ G+++ EL+TG+ P +N D
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 543 MGKSTYGTAYKATL------EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ +G + A +D VAVK L++ + +K+F EA + + H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV-- 78
Query: 597 RAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETI----------VNWATRMSIAIGIA 645
+ Y + +G+ L +VF++M G L FL A GP+ + + + + IA IA
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL ++ +H +L + N L+ E +I DFG+SR + + +
Sbjct: 139 AGMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
PE + T++DV+SLGV++ E+ T GK P
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G YG Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 73
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 719 DVYSLGVIILELLT-GKSP 736
DV++ GV++ E+ T G SP
Sbjct: 192 DVWAFGVLLWEIATYGMSP 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + +VA+K ++E + + +F EA + K+ HP L+ L L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM-SEDDFIEEAEVMMKLSHPKLVQLYGVCL- 92
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ LVF+FM G L+ +L R + T + + + + G+ YL E +IH +L
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDL 149
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
+ N L+ E +++DFG++R + + + +PE+ ++K+DV+S
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 723 LGVIILELLT-GKSPGE 738
GV++ E+ + GK P E
Sbjct: 210 FGVLMWEVFSEGKIPYE 226
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
+ +GK +G G++VAVK ++ T + F AEA+ + ++ H NL+ L
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ KG +V ++M KGSL +L +RG +++ + ++ + + YL N +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHR 132
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L + NVL+ E +++DFGL++ + + APE + +TK+DV
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 721 YSLGVIILELLT-GKSP 736
+S G+++ E+ + G+ P
Sbjct: 189 WSFGILLWEIYSFGRVP 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 543 MGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G +G Y+ + S VAVK L+E T + + EF EAA + +I HPNL+ L L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL----L 73
Query: 602 GPKGEK---LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
G + ++ +FM G+L +L + V+ + +A I+ + YL ++N I
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLE-KKNFI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L + N L+ E ++ADFGLSRLM + + APE + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 719 DVYSLGVIILELLT-GKSP 736
DV++ GV++ E+ T G SP
Sbjct: 192 DVWAFGVLLWEIATYGMSP 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + +VA+K +RE +++F EA + K+ HP L+ L L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 73
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ LV +FM G L+ +L R + T + + + + G+ YL E +IH +L
Sbjct: 74 EQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE-EACVIHRDL 130
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
+ N L+ E +++DFG++R + + + +PE+ ++K+DV+S
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 723 LGVIILELLT-GKSPGE 738
GV++ E+ + GK P E
Sbjct: 191 FGVLMWEVFSEGKIPYE 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH +++IH +L
Sbjct: 76 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-KSIIHRDL 130
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXX-XXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRD 216
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + KI H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 534 DLLCATAE-IMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGK 587
D+ C E ++G +G L+ + VA+K L+ T K +++F +EA+ +G+
Sbjct: 31 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 90
Query: 588 IHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIAR 646
HPN++ L + +++ +FM GSL SFL G T++ + GIA
Sbjct: 91 FDHPNVIHLEGV-VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAA 146
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXX----XXLG 702
G+ YL + N +H +L + N+L++ +++DFGLSR + +
Sbjct: 147 GMKYL-ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ APE + + + +DV+S G+++ E+++ G+ P M D+
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 78 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 132
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 193 DVYAFGIVLYELMTGQLPYSNINNRD 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 76 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 130
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRD 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 81 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 135
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRD 221
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 81 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 135
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXX-XXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRD 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 70
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 127
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H NL ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 543 MGKSTYGTAYKATL------EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ +G + A +D VAVK L++ T +K+F+ EA + + H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 597 RAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIV-------------NWATRMSIAI 642
Y + G+ L +VF++M G L FL A GP+ ++ + + IA
Sbjct: 83 --YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
IA G+ YL ++ +H +L + N L+ +I DFG+SR + +
Sbjct: 141 QIASGMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ PE + T++DV+S GVI+ E+ T GK P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 103 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 157
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXX-XXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 218 DVYAFGIVLYELMTGQLPYSNINNRD 243
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 104 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 158
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXX-XXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL+ + + + APE+ ++++ N ++
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRD 244
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 184 KSDVWSFGILLTELTTKGRVP 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E++G+ +G KA +VA+K++ ++ + K F E + +++HPN++ L
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE--NMI 658
L P LV ++ GSL + LH P A MS + ++G+ YLH + +I
Sbjct: 71 LNPV---CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 659 HGNLTSSNVLLDEK-TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
H +L N+LL T +I DFG + + APE+ + N + K
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 718 TDVYSLGVIILELLTGKSPGEPMNG 742
DV+S G+I+ E++T + P + + G
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 300
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 125
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 186 KSDVWSFGILLTELTTKGRVP 206
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 534 DLLCATAE-IMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGK 587
D+ C E ++G +G L+ + VA+K L+ T K +++F +EA+ +G+
Sbjct: 5 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 588 IHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIAR 646
HPN++ L + +++ +FM GSL SFL G T++ + GIA
Sbjct: 65 FDHPNVIHLEGV-VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAA 120
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXX----XXLG 702
G+ YL + N +H L + N+L++ +++DFGLSR + +
Sbjct: 121 GMKYL-ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ APE + + + +DV+S G+++ E+++ G+ P M D+
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 300
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + T ++VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
+ +V ++M KGSL FL G + + +A +A G+ Y+ N IH +L
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIE-RMNYIHRDL 131
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
S+N+L+ +IADFGL+RL+ + + APE + K+DV+S
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 723 LGVIILELLT-GKSPGEPMNGMDL 745
G+++ EL+T G+ P MN ++
Sbjct: 192 FGILLTELVTKGRVPYPGMNNREV 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E++G+ +G KA +VA+K++ ++ + K F E + +++HPN++ L
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE--NMI 658
L P LV ++ GSL + LH P A MS + ++G+ YLH + +I
Sbjct: 72 LNPV---CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 659 HGNLTSSNVLLDEK-TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
H +L N+LL T +I DFG + + APE+ + N + K
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 718 TDVYSLGVIILELLTGKSPGEPMNG 742
DV+S G+I+ E++T + P + + G
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 124
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 185 KSDVWSFGILLTELTTKGRVP 205
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 30/250 (12%)
Query: 537 CATAE-IMGKSTYGTAYKATLEDGS-----EVAVKRLREKTTKGQK-EFEAEAAAIGKIH 589
C T + ++G +G YK L+ S VA+K L+ T+ Q+ +F EA +G+
Sbjct: 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 590 HPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLN 649
H N++ L + +++ ++M G+L FL + E V + + GIA G+
Sbjct: 105 HHNIIRLEGV-ISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMK 161
Query: 650 YLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APE 707
YL N +H +L + N+L++ +++DFGLSR++ + R APE
Sbjct: 162 YL-ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 708 LSKLKNANTKTDVYSLGVIILELLT-GKSP------GEPMNG----------MDLPQWVA 750
+ + +DV+S G+++ E++T G+ P E M MD P +
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY 280
Query: 751 SIVKEEWTNE 760
++ + W E
Sbjct: 281 QLMMQCWQQE 290
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 127
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 188 KSDVWSFGILLTELTTKGRVP 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KG L FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 75
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 132
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 74
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 74
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 300
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 69
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 126
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 216
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 76
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 223
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 76 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 130
Query: 663 TSSNVLLDEKTNPRIADFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL + + + APE+ ++++ N ++
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRD 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 80
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 137
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 74
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 79
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 136
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 83
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 140
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 719 DVYSLGVIILELLT-GKSP 736
DV+S G+++ E++T G+ P
Sbjct: 201 DVWSFGILLTEIVTHGRIP 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 84
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 141
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 719 DVYSLGVIILELLT-GKSP 736
DV+S G+++ E++T G+ P
Sbjct: 202 DVWSFGILLTEIVTHGRIP 220
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 82
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 139
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 719 DVYSLGVIILELLT-GKSP 736
DV+S G+++ E++T G+ P
Sbjct: 200 DVWSFGILLTEIVTHGRIP 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 104 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 158
Query: 663 TSSNVLLDEKTNPRIADFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL + + + APE+ ++++ N ++
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRD 244
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G ++GT YK V + + T + + F+ E + K H N+L Y
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
P + +V + SL LH ET + IA A+G++YLH + ++IH +L
Sbjct: 96 P--QLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 150
Query: 663 TSSNVLLDEKTNPRIADFGL-SRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT---KT 718
S+N+ L E +I DFGL + + + APE+ ++++ N ++
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMD 744
DVY+ G+++ EL+TG+ P +N D
Sbjct: 211 DVYAFGIVLYELMTGQLPYSNINNRD 236
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 80
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 137
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 719 DVYSLGVIILELLT-GKSP 736
DV+S G+++ E++T G+ P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 541 EIMGKSTYGTAYKATLE----DGSEVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
E++G +G + L+ S VA+K L+ T+ Q+ EF +EA+ +G+ HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVE 654
L +L +FM G+L SFL G T++ + GIA G+ YL E
Sbjct: 80 LEGVVTNSMPVMILT-EFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYL-AE 134
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXX----XXLGYRAPELSK 710
+ +H +L + N+L++ +++DFGLSR + + + APE
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 711 LKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + +D +S G+++ E+++ G+ P M+ D+
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 230
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KG L FL + R P+ + +A IA G+ Y+ N
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 383
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 444 KSDVWSFGILLTELTTKGRVP 464
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + ++ IA G+ Y+ N
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV-------DMSAQIASGMAYVE-RMN 131
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 541 EIMGKSTYGTAYKATLE----DGSEVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
E++G +G + L+ S VA+K L+ T+ Q+ EF +EA+ +G+ HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVE 654
L +L +FM G+L SFL G T++ + GIA G+ YL E
Sbjct: 82 LEGVVTNSMPVMILT-EFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYL-AE 136
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXX----XXLGYRAPELSK 710
+ +H +L + N+L++ +++DFGLSR + + + APE
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 711 LKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + +D +S G+++ E+++ G+ P M+ D+
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 562 VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K L+ T K +++F EA+ +G+ HPN++ L K ++V ++M GSL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLD 105
Query: 621 SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADF 680
SFL + V + + GIA G+ YL + +H +L + N+L++ +++DF
Sbjct: 106 SFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINSNLVCKVSDF 162
Query: 681 GLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKSPG 737
GLSR++ + R +PE + + +DV+S G+++ E+++ G+ P
Sbjct: 163 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
Query: 738 EPMNGMDL 745
M+ D+
Sbjct: 223 WEMSNQDV 230
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ T + F EA + K+ H L+ L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + ++ IA G+ Y+ N
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV-------DMSAQIASGMAYVE-RMN 131
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL+RL+ + + APE +
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + ++VAVK L+ T Q F EA + + H L+ R Y +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLV--RLYAVV 76
Query: 603 PKGEKL-LVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
K E + ++ +FM KGSL FL + G + ++ + + IA G+ Y+ +N IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE-RKNYIHR 133
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L ++NVL+ E +IADFGL+R++ + + APE K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 721 YSLGVIILELLT-GKSP 736
+S G+++ E++T GK P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 99 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 154
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 247
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + + ++VAVK L+ T Q F EA + + H L+ R Y +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLV--RLYAVV 77
Query: 603 PKGEKL-LVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMIHG 660
+ E + ++ ++M KGSL FL + G + ++ + + IA G+ Y+ +N IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE-RKNYIHR 134
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L ++NVL+ E +IADFGL+R++ + + APE K+DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 721 YSLGVIILELLT-GKSP 736
+S G+++ E++T GK P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 109 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 164
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 562 VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K L+ T K +++F EA+ +G+ HPN++ L K ++V ++M GSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLD 134
Query: 621 SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADF 680
SFL + V + + GIA G+ YL + +H +L + N+L++ +++DF
Sbjct: 135 SFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 681 GLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKSPG 737
GLSR++ + R +PE + + +DV+S G+++ E+++ G+ P
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 738 EPMNGMDL 745
M+ D+
Sbjct: 252 WEMSNQDV 259
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G G + ++VAVK L++ + F AEA + ++ H L+ R Y
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLV--RLY 74
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ + ++ ++M GSL FL G + +N + +A IA G+ ++ E N I
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE-ERNYI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H +L ++N+L+ + + +IADFGL+RL+ + + APE K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 719 DVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747
DV+S G+++ E++T G+ P M ++ Q
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G+ +G + T + VA+K L+ + F EA + K+ H L+ L Y +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 603 PKGEKLLVFDFMPKGSLASFL------HARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ +V ++M KGSL FL + R P+ + +A IA G+ Y+ N
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-------DMAAQIASGMAYVE-RMN 301
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+H +L ++N+L+ E ++ADFGL RL+ + + APE +
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 717 KTDVYSLGVIILELLT-GKSP 736
K+DV+S G+++ EL T G+ P
Sbjct: 362 KSDVWSFGILLTELTTKGRVP 382
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 562 VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K L+ T K +++F EA+ +G+ HPN++ L K ++V +FM G+L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGK-PVMIVIEFMENGALD 132
Query: 621 SFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIAD 679
+FL G T++ + GIA G+ YL + +H +L + N+L++ +++D
Sbjct: 133 AFLRKHDGQFTVIQLVGMLR---GIAAGMRYL-ADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 680 FGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
FGLSR++ + R APE + + + +DV+S G+++ E+++ G+ P
Sbjct: 189 FGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
Query: 737 GEPMNGMDL 745
M+ D+
Sbjct: 249 YWDMSNQDV 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + AT ++VAVK ++ + + F AEA + + H L+ L A +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA--VV 252
Query: 603 PKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K ++ +FM KGSL FL + G + + + + IA G+ ++ + N IH +
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE-QRNYIHRD 309
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L ++N+L+ +IADFGL+R++ + + APE + K+DV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVASIVK 754
S G++++E++T G+ P GM P+ + ++ +
Sbjct: 370 SFGILLMEIVTYGRI---PYPGMSNPEVIRALER 400
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + AT ++VAVK ++ + + F AEA + + H L+ L A +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA--VV 79
Query: 603 PKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K ++ +FM KGSL FL + G + + + + IA G+ ++ + N IH +
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE-QRNYIHRD 136
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L ++N+L+ +IADFGL+R++ + + APE + K+DV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 722 SLGVIILELLT-GKSP 736
S G++++E++T G+ P
Sbjct: 197 SFGILLMEIVTYGRIP 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGL+R++ + R +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 562 VAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRAYYLGPKGE-KLLVFDFMPKGSL 619
VA+K L+ T+ Q+ +F +EA+ +G+ HPN++ L + +G ++V ++M GSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSL 137
Query: 620 ASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
+FL G TI+ + G+ G+ YL + +H +L + NVL+D +++
Sbjct: 138 DTFLRTHDGQFTIMQLVGMLR---GVGAGMRYLS-DLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKS 735
DFGLSR++ + R APE + ++ +DV+S GV++ E+L G+
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 736 PGEPMNGMDL 745
P M D+
Sbjct: 254 PYWNMTNRDV 263
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 562 VAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRAYYLGPKGE-KLLVFDFMPKGSL 619
VA+K L+ T+ Q+ +F +EA+ +G+ HPN++ L + +G ++V ++M GSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSL 137
Query: 620 ASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
+FL G TI+ + G+ G+ YL + +H +L + NVL+D +++
Sbjct: 138 DTFLRTHDGQFTIMQLVGMLR---GVGAGMRYLS-DLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKS 735
DFGLSR++ + R APE + ++ +DV+S GV++ E+L G+
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 736 PGEPMNGMDL 745
P M D+
Sbjct: 254 PYWNMTNRDV 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V + M GSL SFL + V + + GIA G+ YL +
Sbjct: 82 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 137
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V ++M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGL R++ + R +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 37/252 (14%)
Query: 541 EIMGKSTYGTAYKATLE-DG--SEVAVKRLREKTTKG-QKEFEAEAAAIGKI-HHPNLLA 595
+++G+ +G KA ++ DG + A+KR++E +K ++F E + K+ HHPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 596 LRAYYLGP---KGEKLLVFDFMPKGSLASFLH-ARGPETIVNWATRMS------------ 639
L LG +G L ++ P G+L FL +R ET +A S
Sbjct: 88 L----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
A +ARG++YL ++ IH NL + N+L+ E +IADFGLSR
Sbjct: 144 FAADVARGMDYLS-QKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 200
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM-------DLPQWVASI 752
+ + A E T +DV+S GV++ E+++ G P GM LPQ
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQGYRLE 258
Query: 753 VKEEWTNEVFDL 764
+EV+DL
Sbjct: 259 KPLNCDDEVYDL 270
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V + M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+++G +G L+ S+ VA+K L+ T K +++F EA+ +G+ HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
L K ++V + M GSL SFL + V + + GIA G+ YL +
Sbjct: 111 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLS-DM 166
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKN 713
+H +L + N+L++ +++DFGLSR++ + R +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 714 ANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ +DV+S G+++ E+++ G+ P M+ D+
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 82 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 133
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 134 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 84 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 135
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 136 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 226
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 83 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 134
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 135 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 85 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 136
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 137 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 81 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 132
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 133 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-----VAVKRLREKTTKGQKEFEA---EAAAIGKIHHPN 592
+++G +GT +K E V +K + +K+ G++ F+A AIG + H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 76
Query: 593 LLALRAYYLGPKGEKLLVFDFMPKGSLASFLH----ARGPETIVNWATRMSIAIGIARGL 648
++ L L P LV ++P GSL + A GP+ ++NW + IA+G+
Sbjct: 77 IVRLLG--LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGM 128
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPE 707
YL E M+H NL + NVLL + ++ADFG++ L+ + + A E
Sbjct: 129 YYLE-EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQ 747
++DV+S GV + EL+T + EP G+ L +
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGA--EPYAGLRLAE 225
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 537 CATAE-IMGKSTYGTAYKATLEDGSE----VAVKRLRE-KTTKGQKEFEAEAAAIGKIHH 590
C T E ++G +G L+ + VA+K L+ T K +++F EA+ +G+ H
Sbjct: 23 CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 591 PNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLN 649
PN++ L K ++V ++M GSL +FL G T++ + GI+ G+
Sbjct: 83 PNIIHLEGVVTKSK-PVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMK 138
Query: 650 YLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR--APE 707
YL + +H +L + N+L++ +++DFGLSR++ + R APE
Sbjct: 139 YLS-DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
Query: 708 LSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + +DV+S G+++ E+++ G+ P M D+
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV 236
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L A ++ + I +G+ YL +
Sbjct: 81 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYLGTK- 136
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 82 RLLGICLTSTVQ--LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 133
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 134 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-----VAVKRLREKTTKGQKEFEA---EAAAIGKIHHPN 592
+++G +GT +K E V +K + +K+ G++ F+A AIG + H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 94
Query: 593 LLALRAYYLGPKGEKLLVFDFMPKGSLASFLH----ARGPETIVNWATRMSIAIGIARGL 648
++ L L P LV ++P GSL + A GP+ ++NW + IA+G+
Sbjct: 95 IVRLLG--LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGM 146
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPE 707
YL E M+H NL + NVLL + ++ADFG++ L+ + + A E
Sbjct: 147 YYLE-EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQ 747
++DV+S GV + EL+T + EP G+ L +
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGA--EPYAGLRLAE 243
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 543 MGKSTYGTAYKAT------LEDGSEVAVKRLREKTTKG-QKEFEAEAAAIGKIHHPNLLA 595
+G+ +G ++A E + VAVK L+E+ + Q +F+ EAA + + +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 596 LRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETI---------------------VN 633
L + G+ + L+F++M G L FL + P T+ ++
Sbjct: 115 LLG--VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 634 WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXX 692
A ++ IA +A G+ YL E +H +L + N L+ E +IADFGLSR +
Sbjct: 173 CAEQLCIARQVAAGMAYLS-ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + PE T++DV++ GV++ E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 84 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 135
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 136 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 562 VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K L+ T K +++F +EA+ +G+ HPN++ L K +++ ++M GSL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLD 97
Query: 621 SFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIAD 679
+FL G T++ + GI G+ YL + + +H +L + N+L++ +++D
Sbjct: 98 AFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS-DMSYVHRDLAARNILVNSNLVCKVSD 153
Query: 680 FGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
FG+SR++ + R APE + + +DV+S G+++ E+++ G+ P
Sbjct: 154 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
Query: 737 GEPMNGMDL 745
M+ D+
Sbjct: 214 YWDMSNQDV 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 75 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 126
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 127 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 83 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 134
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 135 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 225
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 562 VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K L+ T K +++F +EA+ +G+ HPN++ L K +++ ++M GSL
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLD 103
Query: 621 SFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIAD 679
+FL G T++ + GI G+ YL + + +H +L + N+L++ +++D
Sbjct: 104 AFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS-DMSYVHRDLAARNILVNSNLVCKVSD 159
Query: 680 FGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
FG+SR++ + R APE + + +DV+S G+++ E+++ G+ P
Sbjct: 160 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
Query: 737 GEPMNGMDL 745
M+ D+
Sbjct: 220 YWDMSNQDV 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 132
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 133 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 87 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 138
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 139 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 562 VAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K L+ T K +++F +EA+ +G+ HPN++ L K +++ ++M GSL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLD 118
Query: 621 SFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIAD 679
+FL G T++ + GI G+ YL + + +H +L + N+L++ +++D
Sbjct: 119 AFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS-DMSAVHRDLAARNILVNSNLVCKVSD 174
Query: 680 FGLSRLMXXXXXXXXXXXXXXLGYR--APELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
FG+SR++ + R APE + + +DV+S G+++ E+++ G+ P
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 737 GEPMNGMDL 745
M+ D+
Sbjct: 235 YWDMSNQDV 243
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 79 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 134
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH NL + N+L++ + +I DFGL++++ + + APE
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 195 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 84 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 135
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 136 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 226
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
++GK TYG Y L + +A+K + E+ ++ + E A + H N++ Y
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----Y 70
Query: 601 LGPKGEKLLVFDFM---PKGSLASFLHAR-GP----ETIVNWATRMSIAIGIARGLNYLH 652
LG E + FM P GSL++ L ++ GP E + + T+ I GL YLH
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLH 125
Query: 653 VEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL--S 709
+ ++H ++ NVL++ + +I+DFG S+ + L Y APE+
Sbjct: 126 -DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGT-LQYMAPEIIDK 183
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSP----GEPMNGM 743
+ D++SLG I+E+ TGK P GEP M
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 132
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 133 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 88 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 139
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 140 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 37/252 (14%)
Query: 541 EIMGKSTYGTAYKATLE-DG--SEVAVKRLREKTTKG-QKEFEAEAAAIGKI-HHPNLLA 595
+++G+ +G KA ++ DG + A+KR++E +K ++F E + K+ HHPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 596 LRAYYLGP---KGEKLLVFDFMPKGSLASFLH-ARGPETIVNWATRMS------------ 639
L LG +G L ++ P G+L FL +R ET +A S
Sbjct: 81 L----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
A +ARG++YL ++ IH +L + N+L+ E +IADFGLSR
Sbjct: 137 FAADVARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 193
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM-------DLPQWVASI 752
+ + A E T +DV+S GV++ E+++ G P GM LPQ
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQGYRLE 251
Query: 753 VKEEWTNEVFDL 764
+EV+DL
Sbjct: 252 KPLNCDDEVYDL 263
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 84 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 135
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 136 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 106 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 157
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 158 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 248
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 37/252 (14%)
Query: 541 EIMGKSTYGTAYKATLE-DG--SEVAVKRLREKTTKG-QKEFEAEAAAIGKI-HHPNLLA 595
+++G+ +G KA ++ DG + A+KR++E +K ++F E + K+ HHPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 596 LRAYYLGP---KGEKLLVFDFMPKGSLASFLH-ARGPETIVNWATRMS------------ 639
L LG +G L ++ P G+L FL +R ET +A S
Sbjct: 91 L----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
A +ARG++YL ++ IH +L + N+L+ E +IADFGLSR
Sbjct: 147 FAADVARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 203
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM-------DLPQWVASI 752
+ + A E T +DV+S GV++ E+++ G P GM LPQ
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQGYRLE 261
Query: 753 VKEEWTNEVFDL 764
+EV+DL
Sbjct: 262 KPLNCDDEVYDL 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 91 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 142
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 143 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 233
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +F+P GSL +L ++ + I +G+ YL +
Sbjct: 81 GVCYSAGRRNLKL-IMEFLPYGSLREYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 136
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 230
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 132
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 133 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 543 MGKSTYGTAYKATL------EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ +G + A +D VAVK L+E + +++F+ EA + + H ++ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI--V 77
Query: 597 RAYYLGPKGEKLL-VFDFMPKGSLASFLHARGPETI------------VNWATRMSIAIG 643
R + + +G LL VF++M G L FL + GP+ + +++A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLG 702
+A G+ YL + +H +L + N L+ + +I DFG+SR + +
Sbjct: 138 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ PE + T++DV+S GV++ E+ T GK P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
++GK TYG Y L + +A+K + E+ ++ + E A + H N++ Y
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----Y 84
Query: 601 LGPKGEKLLVFDFM---PKGSLASFLHAR-GP----ETIVNWATRMSIAIGIARGLNYLH 652
LG E + FM P GSL++ L ++ GP E + + T+ I GL YLH
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLH 139
Query: 653 VEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL--S 709
+ ++H ++ NVL++ + +I+DFG S+ + L Y APE+
Sbjct: 140 -DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGT-LQYMAPEIIDK 197
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSP----GEPMNGM 743
+ D++SLG I+E+ TGK P GEP M
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 543 MGKSTYGTAYKATL------EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ +G + A +D VAVK L+E + +++F+ EA + + H ++ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI--V 83
Query: 597 RAYYLGPKGEKLL-VFDFMPKGSLASFLHARGPETI------------VNWATRMSIAIG 643
R + + +G LL VF++M G L FL + GP+ + +++A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLG 702
+A G+ YL + +H +L + N L+ + +I DFG+SR + +
Sbjct: 144 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ PE + T++DV+S GV++ E+ T GK P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA G+NY
Sbjct: 78 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAEGMNY 129
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 130 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 543 MGKSTYGTAYKATLE-----DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ + G+ VAVK+L+ Q++F+ E + +H ++ R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 598 AYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
GP + L LV +++P G L FL ++ + + + I +G+ YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG-SRR 135
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKNA 714
+H +L + N+L++ + + +IADFGL++L+ + + APE
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 715 NTKTDVYSLGVIILELLT 732
+ ++DV+S GV++ EL T
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 543 MGKSTYGTAYKATL------EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ +G + A +D VAVK L+E + +++F+ EA + + H ++ +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI--V 106
Query: 597 RAYYLGPKGEKLL-VFDFMPKGSLASFLHARGPETI------------VNWATRMSIAIG 643
R + + +G LL VF++M G L FL + GP+ + +++A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLG 702
+A G+ YL + +H +L + N L+ + +I DFG+SR + +
Sbjct: 167 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ PE + T++DV+S GV++ E+ T GK P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 543 MGKSTYGTAYKATLE-----DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ + G+ VAVK+L+ Q++F+ E + +H ++ R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 598 AYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
GP + L LV +++P G L FL ++ + + + I +G+ YL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG-SRR 134
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKNA 714
+H +L + N+L++ + + +IADFGL++L+ + + APE
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 715 NTKTDVYSLGVIILELLT 732
+ ++DV+S GV++ EL T
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 543 MGKSTYGTAYKATLE-----DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ + G+ VAVK+L+ Q++F+ E + +H ++ R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 598 AYYLGP-KGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
GP + E LV +++P G L FL ++ + + + I +G+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG-SRR 131
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKNA 714
+H +L + N+L++ + + +IADFGL++L+ + + APE
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 715 NTKTDVYSLGVIILELLT 732
+ ++DV+S GV++ EL T
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 543 MGKSTYGTAYKATLE-----DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ + G+ VAVK+L+ Q++F+ E + +H ++ R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 598 AYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
GP + L LV +++P G L FL ++ + + + I +G+ YL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG-SRR 147
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKNA 714
+H +L + N+L++ + + +IADFGL++L+ + + APE
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 715 NTKTDVYSLGVIILELLT 732
+ ++DV+S GV++ EL T
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 85 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 136
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFG ++L+ + + A E
Sbjct: 137 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 227
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++ +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 88 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 139
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 140 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 83 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 134
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFG ++L+ + + A E
Sbjct: 135 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 83 RLLGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 134
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFG ++L+ + + A E
Sbjct: 135 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 527 PFLFTADDLLCATAEIMGKSTYGTAYKATLEDGSE-VAVKRLR-EKTTKGQKEFEAEAAA 584
P+ DD E++G A E VA+KR+ EK E E A
Sbjct: 4 PWSINRDDY--ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 61
Query: 585 IGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLH---ARGPET--IVNWATRMS 639
+ + HHPN+++ ++ K E LV + GS+ + A+G +++ +T +
Sbjct: 62 MSQCHHPNIVSYYTSFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
I + GL YLH + IH ++ + N+LL E + +IADFG+S +
Sbjct: 121 ILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 700 XL----GYRAPE-LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE + +++ + K D++S G+ +EL TG +P
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 76 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 131
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 192 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 225
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 77 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 132
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 193 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 226
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 84 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 139
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 200 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 233
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 83 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 138
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 199 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 232
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 96 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 714 ANTKTDVYSLGVIILELLT----GKSP 736
+ +DV+S GV++ EL T KSP
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 96 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 714 ANTKTDVYSLGVIILELLT----GKSP 736
+ +DV+S GV++ EL T KSP
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 78 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 133
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 109 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 164
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 225 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 258
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 81 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 136
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 78 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 133
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 527 PFLFTADDLLCATAEIMGKSTYGTAYKATLEDGSE-VAVKRLR-EKTTKGQKEFEAEAAA 584
P+ DD E++G A E VA+KR+ EK E E A
Sbjct: 9 PWSINRDDY--ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 66
Query: 585 IGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLH---ARGPET--IVNWATRMS 639
+ + HHPN+++ ++ K E LV + GS+ + A+G +++ +T +
Sbjct: 67 MSQCHHPNIVSYYTSFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
I + GL YLH + IH ++ + N+LL E + +IADFG+S +
Sbjct: 126 ILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 700 XL----GYRAPE-LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE + +++ + K D++S G+ +EL TG +P
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 85 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 140
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 201 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 82 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 137
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 198 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 231
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 543 MGKSTYGTAYKAT---LED--GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+GK +G+ L+D G VAVK+L+ T + ++FE E + + H N++ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 598 --AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y G + KL + +++P GSL +L ++ + I +G+ YL +
Sbjct: 78 GVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK- 133
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX--XXXLGYRAPELSKLKN 713
IH +L + N+L++ + +I DFGL++++ + + APE
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 714 ANTKTDVYSLGVIILELLT--GKSPGEPMNGMDL 745
+ +DV+S GV++ EL T KS P M +
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++ +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 132
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 133 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++ +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 88 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 139
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 140 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 540 AEIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNL 593
+++G +GT YK + DG V A+K LRE T+ K KE EA + + P +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR------GPETIVNWATRMSIAIGIARG 647
L L + LV MP G L H R G + ++NW + IA+G
Sbjct: 82 SRLLGICLTSTVQ--LVTQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQ------IAKG 131
Query: 648 LNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXX-XXXXLGYRAP 706
++YL + ++H +L + NVL+ + +I DFGL+RL+ + + A
Sbjct: 132 MSYLE-DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 707 ELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLP 746
E + ++DV+S GV + EL+T G P + + ++P
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 83 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 134
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFG ++L+ + + A E
Sbjct: 135 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 81 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 132
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFG ++L+ + + A E
Sbjct: 133 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+K LRE T+ K KE EA + + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 88 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 139
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFG ++L+ + + A E
Sbjct: 140 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 230
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 543 MGKSTYGTA--YKATLEDGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+G+ ++G A K+T EDG + +K + ++K ++E E A + + HPN++ R
Sbjct: 32 IGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARG-----PETIVNWATRMSIAIGIARGLNYLHV 653
+ G +V D+ G L ++A+ + I++W ++ +A L ++H
Sbjct: 91 SF-EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH- 142
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+ ++H ++ S N+ L + ++ DFG++R++ Y +PE+ + K
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY-YLSPEICENKP 201
Query: 714 ANTKTDVYSLGVIILELLTGKSPGE 738
N K+D+++LG ++ EL T K E
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEV----AVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLL 594
+++G +GT YK + +G +V A+ LRE T+ K KE EA + + +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNY 650
L L + L+ MP G L ++ G + ++NW + IA+G+NY
Sbjct: 115 RLLGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIAKGMNY 166
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM-XXXXXXXXXXXXXXLGYRAPELS 709
L + ++H +L + NVL+ + +I DFGL++L+ + + A E
Sbjct: 167 LE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ ++DV+S GV + EL+T S +P +G+
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGS--KPYDGI 257
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + AT ++VAVK ++ + + F AEA + + H L+ L A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA--VV 246
Query: 603 PKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K ++ +FM KGSL FL + G + + + + IA G+ ++ + N IH +
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE-QRNYIHRD 303
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L ++N+L+ +IADFGL+R+ + + APE + K+DV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVASIVK 754
S G++++E++T G+ P GM P+ + ++ +
Sbjct: 354 SFGILLMEIVTYGRI---PYPGMSNPEVIRALER 384
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLALRA 598
E +G+ TYG YKA G VA+KR+R A E + + ++HHPN+++L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ LVF+FM K L L +T + + + RG+ + H + ++
Sbjct: 87 VIHSERC-LTLVFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCH-QHRIL 141
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTK 717
H +L N+L++ ++ADFGL+R L YRAP+ L K +T
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 718 TDVYSLGVIILELLTGK 734
D++S+G I E++TGK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLALRA 598
E +G+ TYG YKA G VA+KR+R A E + + ++HHPN+++L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ LVF+FM K L L +T + + + RG+ + H + ++
Sbjct: 87 VIHSERC-LTLVFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCH-QHRIL 141
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTK 717
H +L N+L++ ++ADFGL+R L YRAP+ L K +T
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 718 TDVYSLGVIILELLTGK 734
D++S+G I E++TGK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 559 GSEVAVK--RLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRAYYLGPKGEKLLVFDFMP 615
G+++ VK ++R+ +T+ ++F E + HPN+L L A P L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN-LTSSNVLLDEKTN 674
GSL + LH G +V+ + + A+ +ARG+ +LH E +I + L S +V++DE
Sbjct: 93 YGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT 151
Query: 675 PRI--ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT---KTDVYSLGVIILE 729
RI AD S + APE + K +T D++S V++ E
Sbjct: 152 ARISMADVKFS--------FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWE 203
Query: 730 LLTGKSPGEPMNGMDL 745
L+T + P ++ M++
Sbjct: 204 LVTREVPFADLSNMEI 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 27/238 (11%)
Query: 515 GEMGGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK 573
G MGG F L T D + +GK +G +K L +D S VA+K L ++
Sbjct: 1 GAMGGS--EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58
Query: 574 GQ-------KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR 626
G+ +EF+ E + ++HPN++ L P +V +F+P G L L +
Sbjct: 59 GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDK 115
Query: 627 GPETIVNWATRMSIAIGIARGLNYLHVEEN-MIHGNLTSSNVLLD--EKTNP---RIADF 680
+ W+ ++ + + IA G+ Y+ + ++H +L S N+ L ++ P ++ADF
Sbjct: 116 A--HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 681 GLSRLMXXXXXXXXXXXXXXLGYRAPEL--SKLKNANTKTDVYSLGVIILELLTGKSP 736
GLS+ + APE ++ ++ K D YS +I+ +LTG+ P
Sbjct: 174 GLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 541 EIMGKSTYGTAYKATL------EDGSEVAVKRLREKTTKG-QKEFEAEAAAIGKIHHPNL 593
E +G+ +G YK L E VA+K L++K ++EF EA ++ HPN+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATR-------------MS 639
+ L + K + L ++F + G L FL R P + V +
Sbjct: 75 VCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXX 698
+ IA G+ YL +++H +L + NVL+ +K N +I+D GL R +
Sbjct: 133 LVAQIAAGMEYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 699 XXLGYRAPELSKLKNANTKTDVYSLGVIILELLT-------GKSPGEPMNGM-------- 743
+ + APE + +D++S GV++ E+ + G S + + +
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 251
Query: 744 --DLPQWVASIVKEEW 757
D P WV +++ E W
Sbjct: 252 PDDCPAWVYALMIECW 267
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 541 EIMGKSTYGTAYKATL------EDGSEVAVKRLREKTTKG-QKEFEAEAAAIGKIHHPNL 593
E +G+ +G YK L E VA+K L++K ++EF EA ++ HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATR-------------MS 639
+ L + K + L ++F + G L FL R P + V +
Sbjct: 92 VCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXX 698
+ IA G+ YL +++H +L + NVL+ +K N +I+D GL R +
Sbjct: 150 LVAQIAAGMEYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 699 XXLGYRAPELSKLKNANTKTDVYSLGVIILELLT-------GKSPGEPMNGM-------- 743
+ + APE + +D++S GV++ E+ + G S + + +
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 268
Query: 744 --DLPQWVASIVKEEW 757
D P WV +++ E W
Sbjct: 269 PDDCPAWVYALMIECW 284
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 556 LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL---GPKGEKLLVFD 612
L DG A+KR+ + ++E + EA +HPN+L L AY L G K E L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 613 FMPKGSL---ASFLHARG---PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
F +G+L L +G E + W + +GI RGL +H + H +L +N
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEAIHA-KGYAHRDLKPTN 164
Query: 667 VLLDEKTNPRIADFG--------LSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN---AN 715
+LL ++ P + D G + + YRAPEL +++ +
Sbjct: 165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID 224
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+TDV+SLG ++ ++ G+ P
Sbjct: 225 ERTDVWSLGCVLYAMMFGEGP 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 21/243 (8%)
Query: 542 IMGKSTYGTAYKATL--EDGS--EVAVKRLREKTTKGQ--KEFEAEAAAIGKIHHPNL-- 593
++GK +G+ +A L EDGS +VAVK L+ +EF EAA + + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 594 ---LALRAYYLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNW--ATRMSIAIGIARG 647
++LR+ G +++ FM G L +FL A R E N T + + IA G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 648 LNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAP 706
+ YL N IH +L + N +L E +ADFGLSR + + + A
Sbjct: 150 MEYLS-SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 707 ELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLPQWV--ASIVKE--EWTNEV 761
E +DV++ GV + E++T G++P + ++ ++ + +K+ E EV
Sbjct: 209 ESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEV 268
Query: 762 FDL 764
+DL
Sbjct: 269 YDL 271
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 556 LEDGSEVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLG----PKGE-K 607
L D +VAVK LR + F EA ++HP ++A+ Y G P G
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLP 91
Query: 608 LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V +++ +L +H GP T + + + LN+ H + +IH ++ +N+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIADACQALNFSH-QNGIIHRDVKPANI 147
Query: 668 LLDEKTNPRIADFGLSRLMXXX--XXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
L+ ++ DFG++R + Y +PE ++ + + ++DVYSLG
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 726 IILELLTGKSP 736
++ E+LTG+ P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G + +VAVK ++E + + EF EA + K+ HP L+ + Y +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLV--KFYGVC 72
Query: 603 PKGEKL-LVFDFMPKGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
K + +V +++ G L ++L H +G E + + + + G+ +L IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEP----SQLLEMCYDVCEGMAFLE-SHQFIH 127
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
+L + N L+D +++DFG++R + + + APE+ ++K+D
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 720 VYSLGVIILELLT-GKSP 736
V++ G+++ E+ + GK P
Sbjct: 188 VWAFGILMWEVFSLGKMP 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 556 LEDGSEVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLG----PKGE-K 607
L D +VAVK LR + F EA ++HP ++A+ Y G P G
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLP 91
Query: 608 LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V +++ +L +H GP T + + + LN+ H + +IH ++ +N+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIADACQALNFSH-QNGIIHRDVKPANI 147
Query: 668 LLDEKTNPRIADFGLSRLMXXX--XXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
++ ++ DFG++R + Y +PE ++ + + ++DVYSLG
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 726 IILELLTGKSP 736
++ E+LTG+ P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 27/238 (11%)
Query: 515 GEMGGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK 573
G MGG F L T D + +GK +G +K L +D S VA+K L ++
Sbjct: 1 GAMGGS--EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58
Query: 574 GQ-------KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR 626
G+ +EF+ E + ++HPN++ L P +V +F+P G L L +
Sbjct: 59 GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDK 115
Query: 627 GPETIVNWATRMSIAIGIARGLNYLHVEEN-MIHGNLTSSNVLLD--EKTNP---RIADF 680
+ W+ ++ + + IA G+ Y+ + ++H +L S N+ L ++ P ++ADF
Sbjct: 116 A--HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 681 GLSRLMXXXXXXXXXXXXXXLGYRAPEL--SKLKNANTKTDVYSLGVIILELLTGKSP 736
G S+ + APE ++ ++ K D YS +I+ +LTG+ P
Sbjct: 174 GTSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 556 LEDGSEVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLG----PKGE-K 607
L D +VAVK LR + F EA ++HP ++A+ Y G P G
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLP 91
Query: 608 LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V +++ +L +H GP T + + + LN+ H + +IH ++ +N+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRA---IEVIADACQALNFSH-QNGIIHRDVKPANI 147
Query: 668 LLDEKTNPRIADFGLSRLMXXX--XXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
++ ++ DFG++R + Y +PE ++ + + ++DVYSLG
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 726 IILELLTGKSP 736
++ E+LTG+ P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 27/238 (11%)
Query: 515 GEMGGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK 573
G MGG F L T D + +GK +G +K L +D S VA+K L ++
Sbjct: 1 GAMGGS--EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58
Query: 574 GQ-------KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHAR 626
G+ +EF+ E + ++HPN++ L P +V +F+P G L L +
Sbjct: 59 GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDK 115
Query: 627 GPETIVNWATRMSIAIGIARGLNYLHVEEN-MIHGNLTSSNVLLD--EKTNP---RIADF 680
+ W+ ++ + + IA G+ Y+ + ++H +L S N+ L ++ P ++ADF
Sbjct: 116 A--HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 681 GLSRLMXXXXXXXXXXXXXXLGYRAPEL--SKLKNANTKTDVYSLGVIILELLTGKSP 736
LS+ + APE ++ ++ K D YS +I+ +LTG+ P
Sbjct: 174 SLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 561 EVAVKRL----REKTTKGQKEFEAEAAAIGKIHHPNLLAL-------RAYYLGPKGEKLL 609
+VA+K + REK + K FE E ++ H N++++ YYL
Sbjct: 38 KVAIKAIFIPPREKE-ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL-------- 88
Query: 610 VFDFMPKGSLASFLHARGP---ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
V +++ +L+ ++ + GP +T +N+ + I G+ + H + ++H ++ N
Sbjct: 89 VMEYIEGPTLSEYIESHGPLSVDTAINFTNQ------ILDGIKHAH-DMRIVHRDIKPQN 141
Query: 667 VLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVI 726
+L+D +I DFG+++ + + Y +PE +K + + TD+YS+G++
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 727 ILELLTGKSP 736
+ E+L G+ P
Sbjct: 202 LYEMLVGEPP 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL++ H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLSFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L +F+ A T + S + +GL + H
Sbjct: 71 LDV-IHTENKLYLVFEFLHQ-DLKTFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLRE--KTTKGQKEFEAEAAAIGKIHHPNL 593
L E +GK ++G +K +V ++ + + ++ + E + + +
Sbjct: 24 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
YL KG KL ++ +++ GS L A GP AT + I +GL+YLH
Sbjct: 84 TKYYGSYL--KGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLK---EILKGLDYLH 137
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
E+ IH ++ ++NVLL E+ + ++ADFG++ + + APE+ +
Sbjct: 138 SEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIQQS 195
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
++K D++SLG+ +EL G+ P M+ M
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPM 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 525 DGPFLFTADDLLCATAEIMGKSTYGTAYKATL---EDGSEVAVKRLREKTTKGQ-KEFEA 580
D D+LL A E+ G +G+ + + +VA+K L++ T K +E
Sbjct: 1 DKKLFLKRDNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 59
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSI 640
EA + ++ +P ++ L + +LV + G L FL + E V+ +
Sbjct: 60 EAQIMHQLDNPYIVRLIG--VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 117
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX 700
+ + G+ YL E+N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 118 QVSM--GMKYLE-EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 701 --LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
L + APE + ++++DV+S GV + E L+ G+ P + M G
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT + G +VAVK++ + + ++ E + HH N++ + + YL
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + R L+YLH + +IH
Sbjct: 113 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYLH-NQGVIH 164
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APE+ T+ D
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY-WMAPEVISRLPYGTEVD 223
Query: 720 VYSLGVIILELLTGKSP 736
++SLG++++E++ G+ P
Sbjct: 224 IWSLGIMVIEMIDGEPP 240
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 67 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 122
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 69 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 124
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 15/229 (6%)
Query: 525 DGPFLFTADDLLCATAEIMGKSTYGTAYKATL---EDGSEVAVKRLREKTTKGQ-KEFEA 580
D D+LL A E +G +G+ + + +VA+K L++ T K +E
Sbjct: 327 DKKLFLKRDNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 385
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMS 639
EA + ++ +P ++ L + E L LV + G L FL + E V+ +
Sbjct: 386 EAQIMHQLDNPYIVRLIGVC---QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 442
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
+ + G+ YL E+N +H NL + NVLL + +I+DFGLS+ +
Sbjct: 443 HQVSM--GMKYLE-EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 700 X--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
L + APE + ++++DV+S GV + E L+ G+ P + M G ++
Sbjct: 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 67 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 122
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 69 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 124
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 71 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 75 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 130
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 67 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 122
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 72 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 127
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 67 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 122
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 72 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 127
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 70 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 125
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 71 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 70 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 125
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 69 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 124
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 69 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 124
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 21/248 (8%)
Query: 529 LFTADDLLCATAEIMGKSTYGTAYKA-TLEDGSE-VAVKRLREKT-TKGQKEFEAEAAAI 585
L AD AEI G+ YG +KA L++G VA+KR+R +T +G A+
Sbjct: 6 LCRADQQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV 64
Query: 586 GK----IHHPNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIVNWATR 637
+ HPN++ L + ++ LVF+ + + L ++L + PE V T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLD-KVPEPGVPTETI 122
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX 697
+ + RGL++LH ++H +L N+L+ ++ADFGL+R+
Sbjct: 123 KDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSV 179
Query: 698 XXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIV---- 753
L YRAPE+ + T D++S+G I E+ K + +D + ++
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 754 KEEWTNEV 761
+E+W +V
Sbjct: 240 EEDWPRDV 247
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ L F+ A T + S + +GL + H
Sbjct: 71 LDV-IHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 559 GSEVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMP 615
G VAVK L+ + ++ E + ++H +++ + +GEK LV +++P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGC-CEDQGEKSLQLVMEYVP 101
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
GSL +L P + A + A I G+ YLH + + IH NL + NVLLD
Sbjct: 102 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLV 156
Query: 676 RIADFGLSRLMXX--XXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+I DFGL++ + + + APE K +DV+S GV + ELLT
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ L F+ A T + S + +GL + H
Sbjct: 70 LDV-IHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 125
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 70 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 125
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 21/248 (8%)
Query: 529 LFTADDLLCATAEIMGKSTYGTAYKA-TLEDGSE-VAVKRLREKT-TKGQKEFEAEAAAI 585
L AD AEI G+ YG +KA L++G VA+KR+R +T +G A+
Sbjct: 6 LCRADQQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV 64
Query: 586 GK----IHHPNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIVNWATR 637
+ HPN++ L + ++ LVF+ + + L ++L + PE V T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLD-KVPEPGVPTETI 122
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX 697
+ + RGL++LH ++H +L N+L+ ++ADFGL+R+
Sbjct: 123 KDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSV 179
Query: 698 XXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIV---- 753
L YRAPE+ + T D++S+G I E+ K + +D + ++
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 754 KEEWTNEV 761
+E+W +V
Sbjct: 240 EEDWPRDV 247
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 559 GSEVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMP 615
G VAVK L+E + ++ E + ++H +++ + +GEK LV +++P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGC-CEDQGEKSVQLVMEYVP 96
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
GSL +L P V A + A I G+ YLH + + IH L + NVLLD
Sbjct: 97 LGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLV 151
Query: 676 RIADFGLSRLMXX--XXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+I DFGL++ + + + APE K +DV+S GV + ELLT
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 559 GSEVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMP 615
G VAVK L+E + ++ E + ++H +++ + +GEK LV +++P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGC-CEDQGEKSVQLVMEYVP 95
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
GSL +L P V A + A I G+ YLH + + IH L + NVLLD
Sbjct: 96 LGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLV 150
Query: 676 RIADFGLSRLMXX--XXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+I DFGL++ + + + APE K +DV+S GV + ELLT
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 75 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 130
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 21/248 (8%)
Query: 529 LFTADDLLCATAEIMGKSTYGTAYKA-TLEDGSE-VAVKRLREKT-TKGQKEFEAEAAAI 585
L AD AEI G+ YG +KA L++G VA+KR+R +T +G A+
Sbjct: 6 LCRADQQYECVAEI-GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV 64
Query: 586 GK----IHHPNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIVNWATR 637
+ HPN++ L + ++ LVF+ + + L ++L + PE V T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLD-KVPEPGVPTETI 122
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX 697
+ + RGL++LH ++H +L N+L+ ++ADFGL+R+
Sbjct: 123 KDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSV 179
Query: 698 XXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIV---- 753
L YRAPE+ + T D++S+G I E+ K + +D + ++
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 754 KEEWTNEV 761
+E+W +V
Sbjct: 240 EEDWPRDV 247
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 559 GSEVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMP 615
G VAVK L+ + ++ E + ++H +++ + +GEK LV +++P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGC-CEDQGEKSLQLVMEYVP 101
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
GSL +L P + A + A I G+ YLH ++ IH NL + NVLLD
Sbjct: 102 LGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH-SQHYIHRNLAARNVLLDNDRLV 156
Query: 676 RIADFGLSRLMXX--XXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+I DFGL++ + + + APE K +DV+S GV + ELLT
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 112/216 (51%), Gaps = 22/216 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRA 598
+++G ++G ++A L + EVA+K++ + K F+ I +I HPN++ L+A
Sbjct: 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 599 YYL--GPKGEKL---LVFDFMPKGSL-ASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
++ G K +++ LV +++P+ AS +A+ +T+ ++ + + R L Y+H
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM-YQLLRSLAYIH 158
Query: 653 VEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELS-K 710
+ H ++ N+LLD + ++ DFG ++++ YRAPEL
Sbjct: 159 -SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPELIFG 215
Query: 711 LKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
N T D++S G ++ EL+ G+ PGE +G+D
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGE--SGID 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 561 EVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLG----PKGE-KLLVFD 612
+VAVK LR + F EA ++HP ++A+ Y G P G +V +
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVME 96
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
++ +L +H GP T + + + LN+ H + +IH ++ +N+++
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRA---IEVIADACQALNFSH-QNGIIHRDVKPANIMISAT 152
Query: 673 TNPRIADFGLSRLMXXX--XXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILEL 730
++ DFG++R + Y +PE ++ + + ++DVYSLG ++ E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 731 LTGKSP 736
LTG+ P
Sbjct: 213 LTGEPP 218
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ L F+ A T + S + +GL + H
Sbjct: 71 LDV-IHTENKLYLVFEFL-SMDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 559 GSEVAVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMPK 616
G +VAVK L+ ++ + + E + ++H N++ + G + L+ +F+P
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPR 676
GSL +L + +N ++ A+ I +G++YL + +H +L + NVL++ + +
Sbjct: 98 GSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVK 154
Query: 677 IADFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-G 733
I DFGL++ + + + APE +DV+S GV + ELLT
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 214
Query: 734 KSPGEPM 740
S PM
Sbjct: 215 DSDSSPM 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ L F+ A T + S + +GL + H
Sbjct: 69 LDV-IHTENKLYLVFEFL-SMDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 124
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 536 LCATAEIMGKSTYGTAYKATL--EDGS--EVAVK--RLREKTTKGQKEFEAEAAAIGKIH 589
L +I+G+ +G+ + L EDG+ +VAVK +L + + +EF +EAA +
Sbjct: 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 590 HPNLLALRAYYLGPKGE----KLLVFDFMPKGSLASFL-HAR---GPETIVNWATRMSIA 641
HPN++ L + + +++ FM G L ++L ++R GP+ I T +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI-PLQTLLKFM 153
Query: 642 IGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLS-RLMXXXXXXXXXXXXXX 700
+ IA G+ YL N +H +L + N +L + +ADFGLS ++
Sbjct: 154 VDIALGMEYLS-NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 701 LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ + A E + +K+DV++ GV + E+ T G +P
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 559 GSEVAVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMPK 616
G +VAVK L+ ++ + + E + ++H N++ + G + L+ +F+P
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPR 676
GSL +L + +N ++ A+ I +G++YL + +H +L + NVL++ + +
Sbjct: 110 GSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVK 166
Query: 677 IADFGLSRLMXXXXXXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-G 733
I DFGL++ + + + APE +DV+S GV + ELLT
Sbjct: 167 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226
Query: 734 KSPGEPM 740
S PM
Sbjct: 227 DSDSSPM 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 530 FTADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQK----EFEAEAAAI 585
FT DD +GK +G Y A + + ++ K+ ++ + E
Sbjct: 12 FTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 586 GKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIA 645
+ HPN+L + Y+ K L+ +F P+G L L G AT M +A
Sbjct: 70 SHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELA 125
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
L+Y H E +IH ++ N+L+ K +IADFG S L Y
Sbjct: 126 DALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLP 181
Query: 706 PELSKLKNANTKTDVYSLGVIILELLTGKSP 736
PE+ + K + K D++ GV+ E L G P
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 530 FTADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQK----EFEAEAAAI 585
FT DD +GK +G Y A + + ++ K+ ++ + E
Sbjct: 11 FTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 586 GKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIA 645
+ HPN+L + Y+ K L+ +F P+G L L G AT M +A
Sbjct: 69 SHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELA 124
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
L+Y H E +IH ++ N+L+ K +IADFG S L Y
Sbjct: 125 DALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLP 180
Query: 706 PELSKLKNANTKTDVYSLGVIILELLTGKSP 736
PE+ + K + K D++ GV+ E L G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 530 FTADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQK----EFEAEAAAI 585
FT DD +GK +G Y A + + ++ K+ ++ + E
Sbjct: 11 FTIDDF--DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 586 GKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIA 645
+ HPN+L + Y+ K L+ +F P+G L L G AT M +A
Sbjct: 69 SHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---ELA 124
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
L+Y H E +IH ++ N+L+ K +IADFG S L Y
Sbjct: 125 DALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLP 180
Query: 706 PELSKLKNANTKTDVYSLGVIILELLTGKSP 736
PE+ + K + K D++ GV+ E L G P
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 561 EVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLG----PKGE-KLLVFD 612
+VAVK LR + F EA ++HP ++A+ Y G P G +V +
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 113
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
++ +L +H GP T + + + LN+ H + +IH ++ +N+++
Sbjct: 114 YVDGVTLRDIVHTEGPMT---PKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISAT 169
Query: 673 TNPRIADFGLSRLMXXX--XXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILEL 730
++ DFG++R + Y +PE ++ + + ++DVYSLG ++ E+
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 731 LTGKSP 736
LTG+ P
Sbjct: 230 LTGEPP 235
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 561 EVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLG----PKGE-KLLVFD 612
+VAVK LR + F EA ++HP ++A+ Y G P G +V +
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVME 96
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
++ +L +H GP T + + + LN+ H + +IH ++ +N+++
Sbjct: 97 YVDGVTLRDIVHTEGPMTPKRA---IEVIADACQALNFSH-QNGIIHRDVKPANIMISAT 152
Query: 673 TNPRIADFGLSRLMXXX--XXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILEL 730
++ DFG++R + Y +PE ++ + + ++DVYSLG ++ E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 731 LTGKSP 736
LTG+ P
Sbjct: 213 LTGEPP 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRA 598
E +G+ +G + L D + VAVK RE K +F EA + + HPN++ L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
K +V + + G +FL G V T + + A G+ YL + I
Sbjct: 180 V-CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLE-SKCCI 235
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXX-XXXXXXXXXXXXLGYRAPELSKLKNANTK 717
H +L + N L+ EK +I+DFG+SR + + APE +++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 718 TDVYSLGVIILELLT-GKSP 736
+DV+S G+++ E + G SP
Sbjct: 296 SDVWSFGILLWETFSLGASP 315
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 518 GGKLVHFDGPFLFTADDLLCAT-----AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT 571
G + ++F GP +F + ++GK ++G + G E AVK + ++
Sbjct: 10 GRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 69
Query: 572 TKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGP 628
K + + E+ E + ++ HPN++ L ++ KG LV + G L + +R
Sbjct: 70 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKR 128
Query: 629 ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGLSRL 685
+ V+ A I + G+ Y+H + ++H +L N+LL+ K+ N RI DFGLS
Sbjct: 129 FSEVDAA---RIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 184
Query: 686 MXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD- 744
Y APE+ + K DV+S GVI+ LL+G P N D
Sbjct: 185 FEASKKMKDKIGTAY--YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 241
Query: 745 ------------LPQW 748
LPQW
Sbjct: 242 LKKVEKGKYTFELPQW 257
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 8/200 (4%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRA 598
E +G+ +G + L D + VAVK RE K +F EA + + HPN++ L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
K +V + + G +FL G V T + + A G+ YL + I
Sbjct: 180 V-CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLE-SKCCI 235
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXX-XXXXXXXXXXXXLGYRAPELSKLKNANTK 717
H +L + N L+ EK +I+DFG+SR + + APE +++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 718 TDVYSLGVIILELLT-GKSP 736
+DV+S G+++ E + G SP
Sbjct: 296 SDVWSFGILLWETFSLGASP 315
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQ---KEFEAEAAAIGKIHHPNLLALR 597
++GK ++ Y+A ++ G EVA+K + +K + + E ++ HP++L L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
Y+ LV + G + +L R N A I G+ YLH +
Sbjct: 78 NYF-EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH--FMHQIITGMLYLH-SHGI 133
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
+H +LT SN+LL N +IADFGL+ + Y +PE++ +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP-NYISPEIATRSAHGLE 192
Query: 718 TDVYSLGVIILELLTGKSP 736
+DV+SLG + LL G+ P
Sbjct: 193 SDVWSLGCMFYTLLIGRPP 211
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 541 EIMGKSTYGTAY---KATLED-GSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLL 594
+++G+ ++G + K T D G A+K L++ T K + E + ++HP ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L Y +G+ L+ DF+ G L + L E + +A GL++LH
Sbjct: 94 KLH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDHLH-S 148
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+I+ +L N+LLDE+ + ++ DFGLS+ + Y APE+ +
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
+ D +S GV++ E+LTG P G D + + I+K
Sbjct: 208 SHSADWWSYGVLMFEMLTGSL---PFQGKDRKETMTLILK 244
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 514 GGEMGGKLVHFDGPFLFTADD---LLCATAEIMGKSTYGTAYKATLEDGSEV-AVKRLR- 568
G G L D LF DD L EI G ++G Y A SEV A+K++
Sbjct: 31 AGGRAGSLKDPDVAELFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSY 89
Query: 569 --EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHA- 625
+++ + ++ E + K+ HPN + R YL + LV ++ GS + L
Sbjct: 90 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYC-LGSASDLLEVH 147
Query: 626 RGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685
+ P V A ++ G +GL YLH NMIH ++ + N+LL E ++ DFG + +
Sbjct: 148 KKPLQEVEIA---AVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 203
Query: 686 MXXXXXXXXXXXXXXLGYRAPELSKLKNA---NTKTDVYSLGVIILELLTGKSPGEPMNG 742
M + APE+ + + K DV+SLG+ +EL K P MN
Sbjct: 204 MAPANXFVGTPY-----WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
Query: 743 M 743
M
Sbjct: 259 M 259
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+ ++R T T+G E + + +++HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 68 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+ ++R T T+G E + + +++HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+F+ + L F+ A T + S + +GL + H
Sbjct: 67 LDV-IHTENKLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 122
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 39 AFGQVIEADAFGIDKTATXR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETI---------VNWATRMSIAIGIAR 646
L P G +++ +F G+L+++L ++ E + + + + +A+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAK 155
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRA 705
G+ +L IH +L + N+LL EK +I DFGL+R + L + A
Sbjct: 156 GMEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 706 PELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
PE + ++DV+S GV++ E+ + G SP
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEE 655
A+Y GE + + M GSL L G PE I+ ++I + +GL YL +
Sbjct: 75 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH 127
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
++H ++ SN+L++ + ++ DFG+S + Y +PE + + +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR---SYMSPERLQGTHYS 184
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLEL 766
++D++S+G+ ++E+ G+ P PM +L ++ + + + VF LE
Sbjct: 185 VQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEF 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 40 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 96
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETI------------VNWATRMSIAIG 643
L P G +++ +F G+L+++L ++ E + + + +
Sbjct: 97 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ 156
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLG 702
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 157 VAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 156 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEV----AVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLL 594
+++G+ ++G + GS+ A+K L++ T K + E + +++HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L Y +G+ L+ DF+ G L + L E + +A L++LH
Sbjct: 90 KLH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLH-S 144
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+I+ +L N+LLDE+ + ++ DFGLS+ + Y APE+ +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
D +S GV++ E+LTG P G D + + I+K
Sbjct: 204 TQSADWWSFGVLMFEMLTGTL---PFQGKDRKETMTMILK 240
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 156 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEV----AVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLL 594
+++G+ ++G + GS+ A+K L++ T K + E + +++HP ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L Y +G+ L+ DF+ G L + L E + +A L++LH
Sbjct: 91 KLH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLH-S 145
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+I+ +L N+LLDE+ + ++ DFGLS+ + Y APE+ +
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
D +S GV++ E+LTG P G D + + I+K
Sbjct: 205 TQSADWWSFGVLMFEMLTGTL---PFQGKDRKETMTMILK 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 76 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 193 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 39 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 156 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 41 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 158 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+ + + L +F+ A T + S + +GL + H
Sbjct: 67 LDV-IHTENKLYLVFEHVHQ-DLKTFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 122
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 147 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 562 VAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K + +K +G++ E E A + KI HPN++AL Y G L+ + G L
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES-GGHLYLIMQLVSGGELF 104
Query: 621 SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL---LDEKTNPRI 677
+ +G T + A+R+ + + YLH + ++H +L N+L LDE + I
Sbjct: 105 DRIVEKGFYTERD-ASRL--IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 678 ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+DFGLS++ GY APE+ K + D +S+GVI LL G P
Sbjct: 161 SDFGLSKMEDPGSVLSTACGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLR-EKTTKGQKEFEA-EAAAIGKIHHPNLLALRA 598
E +G+ TYG YKA G A+K++R EK +G E + + ++ H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ K +LVF+ + + L L G E++ T S + + G+ Y H +
Sbjct: 68 V-IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESV----TAKSFLLQLLNGIAYCH-DRR 120
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + +IADFGL+R L YRAP+ L K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 716 TKTDVYSLGVIILELLTG 733
T D++S+G I E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLR-EKTTKGQKEFEA-EAAAIGKIHHPNLLALRA 598
E +G+ TYG YKA G A+K++R EK +G E + + ++ H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ K +LVF+ + + L L E + T S + + G+ Y H + ++
Sbjct: 68 V-IHTKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCH-DRRVL 122
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTK 717
H +L N+L++ + +IADFGL+R L YRAP+ L K +T
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 718 TDVYSLGVIILELLTG 733
D++S+G I E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEV----AVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLL 594
+++G+ ++G + GS+ A+K L++ T K + E + +++HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L Y +G+ L+ DF+ G L + L E + +A L++LH
Sbjct: 90 KLH-YAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLH-S 144
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+I+ +L N+LLDE+ + ++ DFGLS+ + Y APE+ +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
D +S GV++ E+LTG P G D + + I+K
Sbjct: 204 TQSADWWSFGVLMFEMLTGTL---PFQGKDRKETMTMILK 240
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEA-EAAAIGKIHHPNLLAL 596
E +G+ TYG YKA + G VA+K++R T T+G E + + +++HPN++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + LVF+ + + L F+ A T + S + +GL + H
Sbjct: 71 LDV-IHTENKLYLVFEHVDQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHR 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L N+L++ + ++ADFGL+R L YRAPE L K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
T D++SLG I E++T ++ PG+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLR-EKTTKGQKEFEA-EAAAIGKIHHPNLLALRA 598
E +G+ TYG YKA G A+K++R EK +G E + + ++ H N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
+ K +LVF+ + + L L E + T S + + G+ Y H + ++
Sbjct: 68 V-IHTKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCH-DRRVL 122
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTK 717
H +L N+L++ + +IADFGL+R L YRAP+ L K +T
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 718 TDVYSLGVIILELLTG 733
D++S+G I E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 147 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 542 IMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLL 594
++GK ++G K T G E AVK + ++ K + + E+ E + ++ HPN++
Sbjct: 33 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L ++ KG LV + G L + +R + V+ A I + G+ Y+H +
Sbjct: 90 KLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH-K 144
Query: 655 ENMIHGNLTSSNVLLDEKT---NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 711
++H +L N+LL+ K+ N RI DFGLS Y APE+
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY--YIAPEVLH- 201
Query: 712 KNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-------------LPQW 748
+ K DV+S GVI+ LL+G P N D LPQW
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 39 AFGQVIEADAFGIDKTATXR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETI---------VNWATRMSIAIGIAR 646
L P G +++ +F G+L+++L ++ E + + + + +A+
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAK 155
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRA 705
G+ +L IH +L + N+LL EK +I DFGL+R + L + A
Sbjct: 156 GMEFL-ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 706 PELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
PE + ++DV+S GV++ E+ + G SP
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 529 LFTADD---LLCATAEIMGKSTYGTAYKATLEDGSEV-AVKRLR---EKTTKGQKEFEAE 581
LF DD L EI G ++G Y A SEV A+K++ +++ + ++ E
Sbjct: 7 LFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 582 AAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHA-RGPETIVNWATRMSI 640
+ K+ HPN + R YL + LV ++ GS + L + P V A ++
Sbjct: 66 VRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA---AV 120
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX 700
G +GL YLH NMIH ++ + N+LL E ++ DFG + +M
Sbjct: 121 THGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY--- 176
Query: 701 LGYRAPELSKLKNA---NTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ APE+ + + K DV+SLG+ +EL K P MN M
Sbjct: 177 --WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 41 AFGQVIEADAFGIDKTATXR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETI-----------VNWATRMSIAIGI 644
L P G +++ +F G+L+++L ++ E + + + + +
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQV 157
Query: 645 ARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGY 703
A+G+ +L IH +L + N+LL EK +I DFGL+R + L +
Sbjct: 158 AKGMEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
APE + ++DV+S GV++ E+ + G SP
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREK-TTKGQKEFEAEAAAIGKIHHPNLLALRA 598
E +G +G + +D G +VA+K+ R++ + K ++ + E + K++HPN+++ R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 599 Y-----YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
L P LL ++ G L +L+ + ++ I+ L YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH- 138
Query: 654 EENMIHGNLTSSNVLLD---EKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 710
E +IH +L N++L ++ +I D G ++ + L Y APEL +
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT--LQYLAPELLE 196
Query: 711 LKNANTKTDVYSLGVIILELLTGKSPGEP 739
K D +S G + E +TG P P
Sbjct: 197 QKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 147 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 24/207 (11%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E++G +G +KA DG +KR++ K E E A+ K+ H N++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGC 72
Query: 600 YLG--------------PKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGI 644
+ G K + L + +F KG+L ++ R E + + + + I
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL-DKVLALELFEQI 131
Query: 645 ARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR 704
+G++Y+H + +I+ +L SN+ L + +I DFGL + L Y
Sbjct: 132 TKGVDYIH-SKKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKGTLRYM 188
Query: 705 APELSKLKNANTKTDVYSLGVIILELL 731
+PE ++ + D+Y+LG+I+ ELL
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREK-TTKGQKEFEAEAAAIGKIHHPNLLALRA 598
E +G +G + +D G +VA+K+ R++ + K ++ + E + K++HPN+++ R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 599 Y-----YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
L P LL ++ G L +L+ + ++ I+ L YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH- 139
Query: 654 EENMIHGNLTSSNVLLD---EKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 710
E +IH +L N++L ++ +I D G ++ + L Y APEL +
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT--LQYLAPELLE 197
Query: 711 LKNANTKTDVYSLGVIILELLTGKSPGEP 739
K D +S G + E +TG P P
Sbjct: 198 QKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLA 595
A +++ +G AT VAVK L+E T + + +E + I HH N++
Sbjct: 30 AFGQVIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHAR---------GPETI----VNWATRMSIAI 642
L P G +++ +F G+L+++L ++ PE + + + +
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L IH +L + N+LL EK +I DFGL+R + L
Sbjct: 147 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSP 736
+ APE + ++DV+S GV++ E+ + G SP
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLRE--KTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
+GK ++G YK EV ++ + + ++ + E + + P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 601 LGPKGEKL-LVFDFMPKGSLASFLHARGP--ETIVNWATRMSIAIGIARGLNYLHVEENM 657
L K KL ++ +++ GS L GP ET + +I I +GL+YLH E
Sbjct: 87 L--KSTKLWIIMEYLGGGSALDLLKP-GPLEETYI-----ATILREILKGLDYLHSERK- 137
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
IH ++ ++NVLL E+ + ++ADFG++ + + APE+ K + K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQSAYDFK 196
Query: 718 TDVYSLGVIILELLTGKSPGEPMNGM 743
D++SLG+ +EL G+ P ++ M
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPM 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 542 IMGKSTYGTAYKATLEDGS----EVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLAL 596
I+G+ +G Y+ + VAVK ++ T KE F +EA + + HP+++ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 597 RAYYLGPKGEK--LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
+G E+ ++ + P G L +L V T + ++ I + + YL
Sbjct: 79 ----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLE-S 131
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
N +H ++ N+L+ ++ DFGLSR + + + +PE +
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 715 NTKTDVYSLGVIILELLT-GKSP 736
T +DV+ V + E+L+ GK P
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQP 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 542 IMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALR 597
++GK ++G + G E AVK + ++ K + + E+ E + ++ HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
++ KG LV + G L + +R + V+ A I + G+ Y+H + +
Sbjct: 116 EFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH-KNKI 170
Query: 658 IHGNLTSSNVLLDEKT---NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H +L N+LL+ K+ N RI DFGLS Y APE+
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY--YIAPEVLH-GTY 227
Query: 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMD-------------LPQW 748
+ K DV+S GVI+ LL+G P N D LPQW
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 542 IMGKSTYGTAYKATLEDGS----EVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLAL 596
I+G+ +G Y+ + VAVK ++ T KE F +EA + + HP+++ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 597 RAYYLGPKGEK--LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
+G E+ ++ + P G L +L V T + ++ I + + YL
Sbjct: 75 ----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLE-S 127
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
N +H ++ N+L+ ++ DFGLSR + + + +PE +
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 715 NTKTDVYSLGVIILELLT-GKSP 736
T +DV+ V + E+L+ GK P
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQP 210
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 562 VAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K + ++ +G++ E E A + KI HPN++AL Y G L+ + G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELF 104
Query: 621 SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL---LDEKTNPRI 677
+ +G T + A+R+ + + YLH + ++H +L N+L LDE + I
Sbjct: 105 DRIVEKGFYTERD-ASRL--IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 678 ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+DFGLS++ GY APE+ K + D +S+GVI LL G P
Sbjct: 161 SDFGLSKMEDPGSVLSTACGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 542 IMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALR 597
++GK ++G + G E AVK + ++ K + + E+ E + ++ HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
++ KG LV + G L + +R + V+ A I + G+ Y+H + +
Sbjct: 117 EFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH-KNKI 171
Query: 658 IHGNLTSSNVLLDEKT---NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H +L N+LL+ K+ N RI DFGLS Y APE+
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY--YIAPEVLH-GTY 228
Query: 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMD-------------LPQW 748
+ K DV+S GVI+ LL+G P N D LPQW
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 542 IMGKSTYGTAYKATLEDGS----EVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLAL 596
I+G+ +G Y+ + VAVK ++ T KE F +EA + + HP+++ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 597 RAYYLGPKGEK--LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
+G E+ ++ + P G L +L V T + ++ I + + YL
Sbjct: 91 ----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLE-S 143
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
N +H ++ N+L+ ++ DFGLSR + + + +PE +
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 715 NTKTDVYSLGVIILELLT-GKSP 736
T +DV+ V + E+L+ GK P
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQP 226
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLALR 597
E +G+ TYGT +KA + E VA+KR+R A E + ++ H N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNYLHVE 654
L + LVF+F + F G PE + S + +GL + H
Sbjct: 68 DV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLLKGLGFCH-S 119
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKN 713
N++H +L N+L++ ++ADFGL+R L YR P+ L K
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 714 ANTKTDVYSLGVIILELLTGKSPGEPMNGMD-----LPQWVASIVKEEW 757
+T D++S G I EL P P N +D + + + + +E+W
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 559 GSEVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMPK 616
G VAVK L+ + ++ E + ++H +++ + L LV +++P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPR 676
GSL +L P + A + A I G+ YLH + + IH +L + NVLLD +
Sbjct: 120 GSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVK 174
Query: 677 IADFGLSRLMXX--XXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
I DFGL++ + + + APE K +DV+S GV + ELLT
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR 79
Query: 598 AYYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNY 650
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y
Sbjct: 80 -YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAY 137
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 708
+H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 138 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 194
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR 80
Query: 598 AYYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNY 650
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y
Sbjct: 81 -YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAY 138
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 708
+H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 139 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 195
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR 79
Query: 598 AYYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNY 650
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y
Sbjct: 80 -YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAY 137
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 708
+H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 138 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 194
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 562 VAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K + ++ +G++ E E A + KI HPN++AL Y G L+ + G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELF 104
Query: 621 SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL---LDEKTNPRI 677
+ +G T + A+R+ + + YLH + ++H +L N+L LDE + I
Sbjct: 105 DRIVEKGFYTERD-ASRL--IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 678 ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+DFGLS++ GY APE+ K + D +S+GVI LL G P
Sbjct: 161 SDFGLSKMEDPGSVLSTACGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR 79
Query: 598 AYYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNY 650
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y
Sbjct: 80 -YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAY 137
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 708
+H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 138 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 194
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 25/218 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR 79
Query: 598 AYYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNY 650
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y
Sbjct: 80 -YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAY 137
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 708
+H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 138 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELI 194
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLL----- 594
E++G +G +KA DG ++R++ K E E A+ K+ H N++
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHYNGC 73
Query: 595 -------------ALRAYYLGPKGEK----------LLVFDFMPKGSLASFLHARGPETI 631
+L + P+ K + +F KG+L ++ R E +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 632 VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXX 691
+ + + I +G++Y+H + +IH +L SN+ L + +I DFGL +
Sbjct: 134 -DKVLALELFEQITKGVDYIH-SKKLIHRDLKPSNIFLVDTKQVKIGDFGL--VTSLKND 189
Query: 692 XXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
L Y +PE ++ + D+Y+LG+I+ ELL
Sbjct: 190 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR 83
Query: 598 AYYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNY 650
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y
Sbjct: 84 -YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAY 141
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL- 708
+H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 142 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 198
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 234
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 16/214 (7%)
Query: 530 FTADDLLCATAEIMGKSTYGTAYKATLEDGSE--VAVKRLREKTTKGQ---KEFEAEAAA 584
FT DD +GK +G Y A E S VA+K L + + + + E
Sbjct: 20 FTIDDF--EIGRPLGKGKFGNVYLAR-EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 585 IGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGI 644
+HHPN+L L Y+ + L+ ++ P+G L L + +I +
Sbjct: 77 QAHLHHPNILRLYNYFYD-RRRIYLILEYAPRGELYKELQK---SCTFDEQRTATIMEEL 132
Query: 645 ARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYR 704
A L Y H + +IH ++ N+LL K +IADFG S L Y
Sbjct: 133 ADALMYCH-GKKVIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYL 188
Query: 705 APELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
PE+ + + N K D++ +GV+ ELL G P E
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 513 SGGEMGGKLVHF---DGPFLFTADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLRE 569
SG ++G + ++F D LFT E +GK ++G +K +V ++ +
Sbjct: 9 SGVDLGTENLYFQSMDPEELFTK-------LEKIGKGSFGEVFKGIDNRTQKVVAIKIID 61
Query: 570 --KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMPKGSLASFLHAR 626
+ ++ + E + + P + YL K KL ++ +++ GS L
Sbjct: 62 LEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP- 118
Query: 627 GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686
GP AT I I +GL+YLH E+ IH ++ ++NVLL E ++ADFG++ +
Sbjct: 119 GPLDETQIAT---ILREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQL 174
Query: 687 XXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
+ APE+ K ++K D++SLG+ +EL G+ P ++ M +
Sbjct: 175 TDTQIKRNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 232
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRA 598
E +G+ GT Y A + G EVA++++ + ++ E + + +PN++ L +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y +G E +V +++ GSL + ET ++ ++ + L +LH + +I
Sbjct: 87 YLVG--DELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ-VI 139
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H N+ S N+LL + ++ DFG + + APE+ K K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKV 198
Query: 719 DVYSLGVIILELLTGKSP 736
D++SLG++ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 562 VAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLA 620
VA+K + ++ +G++ E E A + KI HPN++AL Y G L+ + G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELF 104
Query: 621 SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL---LDEKTNPRI 677
+ +G T + A+R+ + + YLH + ++H +L N+L LDE + I
Sbjct: 105 DRIVEKGFYTERD-ASRL--IFQVLDAVKYLH-DLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 678 ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+DFGLS++ GY APE+ K + D +S+GVI LL G P
Sbjct: 161 SDFGLSKMEDPGSVLSTACGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 91
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 150
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 151 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 207
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 242
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+++G ++G Y+A L D E VA+K K +G+ E + K+ H N++ LR Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLR-Y 80
Query: 600 YLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYLH 652
+ GEK LV D++P+ H +R +T+ ++ + + R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 653 VEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-SK 710
+ H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIFG 196
Query: 711 LKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 107
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 166
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 167 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 223
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 258
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K K +G+ E + K+ H N++ LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLR- 79
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 139 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 195
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 559 GSEVAVK--RLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRAYYLGPKGEKLLVFDFMP 615
G+++ VK ++R+ +T+ ++F E + HPN+L L A P L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN-LTSSNVLLDEKTN 674
GSL + LH G +V+ + + A+ ARG +LH E +I + L S +V +DE
Sbjct: 93 YGSLYNVLH-EGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXT 151
Query: 675 PRI--ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT---KTDVYSLGVIILE 729
RI AD S + APE + K +T D +S V++ E
Sbjct: 152 ARISXADVKFS--------FQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWE 203
Query: 730 LLTGKSP 736
L+T + P
Sbjct: 204 LVTREVP 210
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 92
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 151
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 152 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 208
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 243
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 98
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 157
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 158 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 214
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 87
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 146
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 147 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 203
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 91
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 150
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 151 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 207
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 242
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFE-AEAAAIGKIHHPNLLALRA 598
E +G TY T YK G VA+K ++ + +G E + + ++ H N++ R
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV--RL 68
Query: 599 YYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAI------GIARGLNYL 651
Y + KL LVF+FM L ++ +R T+ N + + + + +GL +
Sbjct: 69 YDVIHTENKLTLVFEFM-DNDLKKYMDSR---TVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSK 710
H E ++H +L N+L++++ ++ DFGL+R L YRAP+ L
Sbjct: 125 H-ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 711 LKNANTKTDVYSLGVIILELLTGK 734
+ +T D++S G I+ E++TGK
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 84
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 143
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 144 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 200
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 235
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAY 599
E++G TYG YK ++A ++ + T ++E + E + K HH N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 600 YL-----GPKGEKLLVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHV 653
++ G + LV +F GS+ + + +G W I I RGL++LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRGLSHLH- 146
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+ +IH ++ NVLL E ++ DFG+S + + APE+
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY-WMAPEVIACDE 205
Query: 714 -----ANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
+ K+D++SLG+ +E+ G P M+ M
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 113
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 172
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 173 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 229
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 264
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 113
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 172
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 173 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 229
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 264
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 115
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 174
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 175 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 231
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 266
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 117
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 176
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 177 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 233
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 268
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLRE--KTTKGQKEFEAEAAAIGKIHHPNL 593
L E +GK ++G +K +V ++ + + ++ + E + + P +
Sbjct: 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
YL K KL ++ +++ GS L GP AT I I +GL+YLH
Sbjct: 83 TKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP-GPLDETQIAT---ILREILKGLDYLH 136
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
E+ IH ++ ++NVLL E ++ADFG++ + + APE+ K
Sbjct: 137 SEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQS 194
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++K D++SLG+ +EL G+ P ++ M +
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKV 227
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+++G ++G Y+A L D E VA+K K +G+ E + K+ H N++ LR Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLR-Y 80
Query: 600 YLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYLH 652
+ GEK LV D++P H +R +T+ ++ + + R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIH 139
Query: 653 VEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-SK 710
+ H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIFG 196
Query: 711 LKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLRE--KTTKGQKEFEAEAAAIGKIHHPNL 593
L E +GK ++G +K +V ++ + + ++ + E + + P +
Sbjct: 8 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
YL K KL ++ +++ GS L GP AT I I +GL+YLH
Sbjct: 68 TKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP-GPLDETQIAT---ILREILKGLDYLH 121
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
E+ IH ++ ++NVLL E ++ADFG++ + + APE+ K
Sbjct: 122 SEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIKQS 179
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++K D++SLG+ +EL G+ P ++ M +
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKR-LREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+++G ++G Y+A L D E VA+K+ L++K K + E + K+ H N++ LR
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLR- 158
Query: 599 YYLGPKGEKL------LVFDFMPKGSLASFLH-ARGPETIVNWATRMSIAIGIARGLNYL 651
Y+ GEK LV D++P+ H +R +T+ ++ + + R L Y+
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 217
Query: 652 HVEENMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-S 709
H + H ++ N+LLD T ++ DFG ++ + YRAPEL
Sbjct: 218 H-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIF 274
Query: 710 KLKNANTKTDVYSLGVIILELLTGKS--PGEPMNGMD 744
+ + DV+S G ++ ELL G+ PG+ +G+D
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVD 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 115
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +LT+ N
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLTARN 174
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 175 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 234
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 235 LMWEIFTLGGSP 246
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLRE--KTTKGQKEFEAEAAAIGKIHHPNL 593
L E +GK ++G +K +V ++ + + ++ + E + + P +
Sbjct: 8 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
YL K KL ++ +++ GS L GP AT I I +GL+YLH
Sbjct: 68 TKYYGSYL--KDTKLWIIMEYLGGGSALDLLEP-GPLDETQIAT---ILREILKGLDYLH 121
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
E+ IH ++ ++NVLL E ++ADFG++ + + APE+ K
Sbjct: 122 SEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQS 179
Query: 713 NANTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++K D++SLG+ +EL G+ P ++ M +
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 97/230 (42%), Gaps = 41/230 (17%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEF--EAEAAAIGKIHHPNLLAL-- 596
E++G+ YG YK +L D VAVK + ++ F E + + H N+
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 597 ---RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
R G + E LLV ++ P GSL +L +W + +A + RGL YLH
Sbjct: 75 GDERVTADG-RMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT 129
Query: 654 E--------ENMIHGNLTSSNVLLDEKTNPRIADFGLS------RLMXX-XXXXXXXXXX 698
E + H +L S NVL+ I+DFGLS RL+
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 699 XXLGYRAPE-------LSKLKNANTKTDVYSLGVIILELL---TGKSPGE 738
+ Y APE L ++A + D+Y+LG+I E+ T PGE
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 104
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 163
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 224 GVLLWEIFTLGGSP 237
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 160
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 219
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 280 GVLLWEIFTLGGSP 293
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 119
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 178
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 239 GVLLWEIFTLGGSP 252
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A ++ + A+K L + + + + E + HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 76 YF-HDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKKVI 130
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E D + ++ + E+T F E RD
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV---EFTFPDFVTEGARD 235
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 111
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 170
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 231 GVLLWEIFTLGGSP 244
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 108
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 167
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 228 GVLLWEIFTLGGSP 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 112
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 171
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 232 GVLLWEIFTLGGSP 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 119
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 178
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 239 GVLLWEIFTLGGSP 252
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 119
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 178
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 239 GVLLWEIFTLGGSP 252
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 560 SEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
++VAVK L+ + T K + +E + I H N++ L G ++ ++ KG
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKG 119
Query: 618 SLASFLHAR-------------GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
+L +L AR PE ++ +S A +ARG+ YL + IH +L +
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL-ASKKCIHRDLAA 178
Query: 665 SNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSL 723
NVL+ E +IADFGL+R + + + APE + ++DV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 724 GVIILELLT-GKSP 736
GV++ E+ T G SP
Sbjct: 239 GVLLWEIFTLGGSP 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E RIADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRA 598
E +G+ GT Y A + G EVA++++ + ++ E + + +PN++ L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y +G E +V +++ GSL + ET ++ ++ + L +LH + +I
Sbjct: 86 YLVG--DELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ-VI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ S N+LL + ++ DFG + + APE+ K K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKV 197
Query: 719 DVYSLGVIILELLTGKSP 736
D++SLG++ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRA 598
E +G+ GT Y A + G EVA++++ + ++ E + + +PN++ L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y +G E +V +++ GSL + ET ++ ++ + L +LH + +I
Sbjct: 86 YLVG--DELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ-VI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ S N+LL + ++ DFG + + APE+ K K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY-WMAPEVVTRKAYGPKV 197
Query: 719 DVYSLGVIILELLTGKSP 736
D++SLG++ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 34/230 (14%)
Query: 542 IMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLL 594
++GK ++G K T G E AVK + ++ K + + E+ E + ++ HPN+
Sbjct: 33 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L ++ KG LV + G L + +R + V+ A I + G+ Y H +
Sbjct: 90 KLYEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYXH-K 144
Query: 655 ENMIHGNLTSSNVLLDEKT---NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 711
++H +L N+LL+ K+ N RI DFGLS Y APE+
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY--YIAPEVLH- 201
Query: 712 KNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-------------LPQW 748
+ K DV+S GVI+ LL+G P N D LPQW
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 124
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 125 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 181
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 182 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 558 DGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614
+G A+K L+++ K+ E E + + HP ++ + + + + ++ D++
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ-QIFMIMDYI 88
Query: 615 PKGSLASFLH--ARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G L S L R P + + A + L YLH +++I+ +L N+LLD+
Sbjct: 89 EGGELFSLLRKSQRFPNPVAKFY-----AAEVCLALEYLH-SKDIIYRDLKPENILLDKN 142
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ +I DFG ++ + Y APE+ K N D +S G++I E+L
Sbjct: 143 GHIKITDFGFAKYVPDVTYXLCGTP----DYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
Query: 733 GKSPGEPMNGM 743
G +P N M
Sbjct: 199 GYTPFYDSNTM 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 73
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 130
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVAS 751
+ GV++ E+ + GK P E + + +A
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRA 598
E +G+ GT Y A + G EVA++++ + ++ E + + +PN++ L +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y +G E +V +++ GSL + ET ++ ++ + L +LH + +I
Sbjct: 86 YLVG--DELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ-VI 138
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ S N+LL + ++ DFG + + APE+ K K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-WMAPEVVTRKAYGPKV 197
Query: 719 DVYSLGVIILELLTGKSP 736
D++SLG++ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 73
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 130
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVAS 751
+ GV++ E+ + GK P E + + +A
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 96
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 97 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 154 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLL-ALRA 598
E +G+ GT Y A + G EVA++++ + ++ E + + +PN++ L +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y +G E +V +++ GSL + ET ++ ++ + L +LH + +I
Sbjct: 87 YLVG--DELWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ-VI 139
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ S N+LL + ++ DFG + + APE+ K K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY-WMAPEVVTRKAYGPKV 198
Query: 719 DVYSLGVIILELLTGKSP 736
D++SLG++ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 101
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 102 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 158
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 159 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 96
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 97 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 154 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 68
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 125
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVAS 751
+ GV++ E+ + GK P E + + +A
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 72
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 129
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVAS 751
+ GV++ E+ + GK P E + + +A
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 25/224 (11%)
Query: 543 MGKSTYGTAYKATLEDG-SEVAVKRLREKT-------------TKGQKEFEAEAAAIGKI 588
+G YG ++G SE A+K +++ K +E E + + +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 589 HHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
HPN++ L + K LV +F G L + R + A M I G+
Sbjct: 104 DHPNIIKLFDVF-EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK---QILSGI 159
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
YLH + N++H ++ N+LL+ K N +I DFGLS Y A
Sbjct: 160 CYLH-KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY--YIA 216
Query: 706 PELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWV 749
PE+ K K N K DV+S GVI+ LL G P N D+ + V
Sbjct: 217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 88
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 145
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVA 750
+ GV++ E+ + GK P E + + +A
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 78 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 132
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 99
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 100 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 156
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 157 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 98
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 99 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 155
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 156 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 79
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 136
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVAS 751
+ GV++ E+ + GK P E + + +A
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 541 EIMGK-STYGTAYKATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNLLAL 596
EI+G+ +G YKA ++ S +A ++ + TK ++E E E + HPN++ L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 597 -RAYYLGPKGEKLLVFDFMPKGSL-ASFLHARGP--ETIVNWATRMSIAIGIARGLNYLH 652
A+Y + ++ +F G++ A L P E+ + + ++ LNYLH
Sbjct: 73 LDAFYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLH 125
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL---- 708
+ +IH +L + N+L + ++ADFG+S + APE+
Sbjct: 126 -DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 709 -SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
SK + + K DV+SLG+ ++E+ + P +N M
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602
+G +G +VA+K ++E + + EF EA + + H L+ L Y +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL--YGVC 88
Query: 603 PKGEKLLVF-DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGN 661
K + + ++M G L ++L R + + + + YL ++ +H +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRD 145
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L + N L++++ +++DFGLSR + + + PE+ ++K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 722 SLGVIILELLT-GKSPGEPMNGMDLPQWVA 750
+ GV++ E+ + GK P E + + +A
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P+G + L AT ++ +A L+Y H + +I
Sbjct: 81 YF-HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 93
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 94 LRSFLQVR--KYSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 150
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 151 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 543 MGKSTYGTAYK--ATLEDGSEVAVKRLREKTTKGQKEFE-AEAAAIGKIHHPNLLALRAY 599
+G+ TY T YK + L D VA+K +R + +G E + + + H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
+ + LVF+++ K L +L G I+N + RGL Y H + ++H
Sbjct: 69 -IHTEKSLTLVFEYLDK-DLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH-RQKVLH 123
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTKT 718
+L N+L++E+ ++ADFGL+R L YR P+ L + +T+
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 719 DVYSLGVIILELLTGK 734
D++ +G I E+ TG+
Sbjct: 183 DMWGVGCIFYEMATGR 198
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLALR 597
E +G+ TYGT +KA + E VA+KR+R A E + ++ H N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNYLHVE 654
L + LVF+F + F G PE + S + +GL + H
Sbjct: 68 DV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLLKGLGFCH-S 119
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKN 713
N++H +L N+L++ ++A+FGL+R L YR P+ L K
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 714 ANTKTDVYSLGVIILELLTGKSPGEPMNGMD-----LPQWVASIVKEEW 757
+T D++S G I EL P P N +D + + + + +E+W
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 78 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 132
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 559 GSEVAVKRLREK---TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G+E A+K +++ TT E A + ++ HPN++ L ++ K LV +
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF-EDKRNYYLVMEVYR 104
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
G L + R + V+ A M + G YLH + N++H +L N+LL+ K+
Sbjct: 105 GGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH-KHNIVHRDLKPENLLLESKSRD 160
Query: 676 ---RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+I DFGLS Y APE+ + K + K DV+S GVI+ LL
Sbjct: 161 ALIKIVDFGLSAHFEVGGKMKERLGTAY--YIAPEVLR-KKYDEKCDVWSCGVILYILLC 217
Query: 733 GKSP 736
G P
Sbjct: 218 GYPP 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G+ +YG+ YKA E G VA+K++ +E E + + + P+++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
Y + +V ++ GS++ + R + +I +GL YLH IH
Sbjct: 93 YFK-NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA--TILQSTLKGLEYLHFMRK-IH 148
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ + N+LL+ + + ++ADFG++ + + APE+ + N D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF-WMAPEVIQEIGYNCVAD 207
Query: 720 VYSLGVIILELLTGKSPGEPMNGM 743
++SLG+ +E+ GK P ++ M
Sbjct: 208 IWSLGITAIEMAEGKPPYADIHPM 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 96
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 97 LRSFLQVR--KFSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSATDCVKLG 153
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 154 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 96
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 97 LRSFLQVR--KFSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 154 DFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 74 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 128
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-----------KEFEAEAAAIGKIHH 590
+ +YG +G VA+KR+ + G+ K E + HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 591 PNLLALR---AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARG 647
PN+L LR ++ P KL + + + LA +H + +++ I G
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ--RIVISPQHIQYFMYHILLG 146
Query: 648 LNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
L+ LH E ++H +L N+LL + + I DF L+R YRAPE
Sbjct: 147 LHVLH-EAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 708 L-SKLKNANTKTDVYSLGVIILELLTGKS 735
L + K D++S G ++ E+ K+
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 523 HFDGPFLFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKT 571
+F ++ D+ A +I +G+ ++G Y K ++D E VA+K + E
Sbjct: 30 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 89
Query: 572 TKGQK-EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARG 627
+ ++ EF EA+ + + HH +R + +G+ L++ + M +G L S+L +
Sbjct: 90 SMRERIEFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 145
Query: 628 PETIVN-------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADF 680
PE N + + +A IA G+ YL+ + +H +L + N ++ E +I DF
Sbjct: 146 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDF 204
Query: 681 GLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
G++R + + + +PE K T +DV+S GV++ E+ T
Sbjct: 205 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 74 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 128
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 74 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 128
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E+ + +G +KA L + VAVK + K + E E ++ + H N+L +
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQ----F 83
Query: 601 LGPKG-------EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+G + + L+ F KGSL+ FL A +V+W IA +ARGL YLH
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE 139
Query: 654 E---------ENMIHGNLTSSNVLLDEKTNPRIADFGLS-RLMXXXXXXXXXXXXXXLGY 703
+ + H ++ S NVLL IADFGL+ + Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 704 RAPELSK-----LKNANTKTDVYSLGVIILELLTGKSPGE-PMNGMDLP 746
APE+ + ++A + D+Y++G+++ EL + + + P++ LP
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP 248
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQ-----------KEFEAEAAAIGKIHH 590
+ +YG +G VA+KR+ + G+ K E + HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 591 PNLLALR---AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARG 647
PN+L LR ++ P KL + + + LA +H + +++ I G
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ--RIVISPQHIQYFMYHILLG 146
Query: 648 LNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
L+ LH E ++H +L N+LL + + I DF L+R YRAPE
Sbjct: 147 LHVLH-EAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 708 L-SKLKNANTKTDVYSLGVIILELLTGKS 735
L + K D++S G ++ E+ K+
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 559 GSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIH-------HPNLLALRAYYLGPKGEKL 608
G E AVK + E+ + Q E E A + H HP+++ L Y
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLE-EVREATRRETHILRQVAGHPHIITLIDSYES-SSFMF 176
Query: 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668
LVFD M KG L +L + + TR SI + +++LH N++H +L N+L
Sbjct: 177 LVFDLMRKGELFDYLTEKV--ALSEKETR-SIMRSLLEAVSFLHAN-NIVHRDLKPENIL 232
Query: 669 LDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT------KTDVYS 722
LD+ R++DFG S + GY APE+ K T + D+++
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLRELCGTP--GYLAPEILKCSMDETHPGYGKEVDLWA 290
Query: 723 LGVIILELLTGKSP 736
GVI+ LL G P
Sbjct: 291 CGVILFTLLAGSPP 304
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 559 GSEVAVKRLREK---TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G+E A+K +++ TT E A + ++ HPN++ L ++ K LV +
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF-EDKRNYYLVMEVYR 87
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
G L + R + V+ A M + G YLH + N++H +L N+LL+ K+
Sbjct: 88 GGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH-KHNIVHRDLKPENLLLESKSRD 143
Query: 676 ---RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+I DFGLS Y APE+ + K + K DV+S GVI+ LL
Sbjct: 144 ALIKIVDFGLSAHFEVGGKMKERLGTAY--YIAPEVLR-KKYDEKCDVWSCGVILYILLC 200
Query: 733 GKSP 736
G P
Sbjct: 201 GYPP 204
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 559 GSEVAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKG 617
G AVK + +K KG++ E E A + KI H N++AL Y P LV + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESP-NHLYLVMQLVSGG 105
Query: 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTN 674
L + +G T + +T + + + YLH ++H +L N+L DE++
Sbjct: 106 ELFDRIVEKGFYTEKDASTLIR---QVLDAVYYLH-RMGIVHRDLKPENLLYYSQDEESK 161
Query: 675 PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGK 734
I+DFGLS++ GY APE+ K + D +S+GVI LL G
Sbjct: 162 IMISDFGLSKMEGKGDVMSTACGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 735 SP 736
P
Sbjct: 220 PP 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 98 --YFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ +D+++LG II +L+ G P
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 44/266 (16%)
Query: 511 VESGGEMG-GKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLR 568
+ES G++ H+D FTA+DL EI G+ YG+ K + G +AVKR+R
Sbjct: 3 IESSGKLKISPEQHWD----FTAEDLK-DLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIR 56
Query: 569 EKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKG------SLAS 621
K QK+ + + + + L +G+ + + M + S
Sbjct: 57 STVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYS 116
Query: 622 FLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681
L PE I+ I + + LN+L +IH ++ SN+LLD N ++ DFG
Sbjct: 117 VLDDVIPEEILG-----KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG 171
Query: 682 LSRLMXXXXXXXXXXXXXXLGYRAPEL----SKLKNANTKTDVYSLGVIILELLTGKSPG 737
+S + Y APE + + + ++DV+SLG+ + EL TG+ P
Sbjct: 172 ISGQLVDSIAKTRDAGCR--PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP- 228
Query: 738 EPMNGMDLPQWVASIVKEEWTNEVFD 763
P+W N VFD
Sbjct: 229 -------YPKW----------NSVFD 237
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 84 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 138
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGS----EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNL 593
E +G ++G + + S VAVK L+ + +F E A+ + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
+ L L P + +V + P GSL L ++ +R A+ +A G+ YL
Sbjct: 84 IRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE- 138
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL--GYRAPELSKL 711
+ IH +L + N+LL + +I DFGL R + + + APE K
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 712 KNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742
+ + +D + GV + E+ T G+ P +NG
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P+G + L AT ++ +A L+Y H + +I
Sbjct: 81 YF-HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 240
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 32/229 (13%)
Query: 541 EIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
EI + +G +KA L D V + L++K + + E E + + H NLL A
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSW---QSEREIFSTPGMKHENLLQFIAA 77
Query: 600 YLGPKGEKL-----LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
+G L L+ F KGSL +L I+ W +A ++RGL+YLH +
Sbjct: 78 E--KRGSNLEVELWLITAFHDKGSLTDYLKG----NIITWNELCHVAETMSRGLSYLHED 131
Query: 655 ----------ENMIHGNLTSSNVLLDEKTNPRIADFGLS-RLMXXXXXXXXXXXXXXLGY 703
++ H + S NVLL +ADFGL+ R Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 704 RAPELSK-----LKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLP 746
APE+ + ++A + D+Y++G+++ EL++ K+ P++ LP
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLP 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 523 HFDGPFLFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKT 571
+F ++ D+ A +I +G+ ++G Y K ++D E VA+K + E
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 572 TKGQK-EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARG 627
+ ++ EF EA+ + + HH +R + +G+ L++ + M +G L S+L +
Sbjct: 68 SMRERIEFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 628 PETIVN-------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADF 680
PE N + + +A IA G+ YL+ + +H +L + N ++ E +I DF
Sbjct: 124 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDF 182
Query: 681 GLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
G++R + + + +PE K T +DV+S GV++ E+ T
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 117
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 176
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 177 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 236
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 237 LMWEIFTLGGSP 248
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 543 MGKSTYGTAYKATLEDG-SEVAVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLALRAYY 600
GK TA+ G + VAVK L+E + + ++ +E + +++HP+++ L
Sbjct: 36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA- 94
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHAR---GP------------------ETIVNWATRMS 639
G LL+ ++ GSL FL GP E + +S
Sbjct: 95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXX 698
A I++G+ YL E +++H +L + N+L+ E +I+DFGLSR +
Sbjct: 155 FAWQISQGMQYL-AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGR 213
Query: 699 XXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + A E T++DV+S GV++ E++T
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 120
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 179
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 180 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 239
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 240 LMWEIFTLGGSP 251
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 543 MGKSTYGTAYKATLEDG-SEVAVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLALRAYY 600
GK TA+ G + VAVK L+E + + ++ +E + +++HP+++ L
Sbjct: 36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA- 94
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHAR---GP------------------ETIVNWATRMS 639
G LL+ ++ GSL FL GP E + +S
Sbjct: 95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXX 698
A I++G+ YL E ++H +L + N+L+ E +I+DFGLSR +
Sbjct: 155 FAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGR 213
Query: 699 XXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + A E T++DV+S GV++ E++T
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 543 MGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQ-KEFEAEAAAIGKIHH-PNLLALRAY 599
MG T G +K + G +AVK++R K + K + + K H P ++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARG----PETIVNWATRMSIAIGIARGLNYLHVEE 655
++ + + + M G+ A L R PE I+ +M++AI + L YL +
Sbjct: 93 FI-TNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG---KMTVAI--VKALYYLKEKH 144
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLS-RLMXXXXXXXXXXXXXXLGYRAPEL-----S 709
+IH ++ SN+LLDE+ ++ DFG+S RL+ Y APE
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCA---AYMAPERIDPPDP 201
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + DV+SLG+ ++EL TG+ P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHA--RGPETIVNWATRMSIAIGIARGLNYLHVEE 655
A+Y GE + + M GSL L R PE I+ ++I + RGL YL +
Sbjct: 82 AFY--SDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLREKH 134
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
++H ++ SN+L++ + ++ DFG+S + Y APE + + +
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMAPERLQGTHYS 191
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++D++S+G+ ++EL G+ P P + +L
Sbjct: 192 VQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 543 MGKSTYGTAYKATLEDG-SEVAVKRLREKTTKGQ-KEFEAEAAAIGKIHHPNLLALRAYY 600
GK TA+ G + VAVK L+E + + ++ +E + +++HP+++ L
Sbjct: 36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA- 94
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHAR---GP------------------ETIVNWATRMS 639
G LL+ ++ GSL FL GP E + +S
Sbjct: 95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLIS 154
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXX 698
A I++G+ YL E ++H +L + N+L+ E +I+DFGLSR +
Sbjct: 155 FAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGR 213
Query: 699 XXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + A E T++DV+S GV++ E++T
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 561 EVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGS 618
E A+K +R+ + T + E A + + HPN++ L ++ K LV + G
Sbjct: 64 ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-EDKRNYYLVMECYKGGE 122
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP--- 675
L + R V+ A I + G+ YLH + N++H +L N+LL+ K
Sbjct: 123 LFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLH-KHNIVHRDLKPENLLLESKEKDALI 178
Query: 676 RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS 735
+I DFGLS + Y APE+ + K + K DV+S+GVI+ LL G
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAY--YIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP 235
Query: 736 P 736
P
Sbjct: 236 P 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 17/248 (6%)
Query: 526 GPFLFTADDLLCATAEIMGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAE 581
GP + +D +GK +G Y A + + A+K L + + + + E
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 582 AAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIA 641
+ HPN+L L Y+ L+ ++ P G++ L AT ++
Sbjct: 59 VEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-- 115
Query: 642 IGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL 701
+A L+Y H + +IH ++ N+LL +IADFG S L
Sbjct: 116 -ELANALSYCH-SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTL 170
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEV 761
Y PE+ + + + K D++SLGV+ E L GK P E + + ++ + E+T
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPD 227
Query: 762 FDLELMRD 769
F E RD
Sbjct: 228 FVTEGARD 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 28/227 (12%)
Query: 529 LFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK- 576
+F D+ A +I +G+ ++G Y K ++D E VA+K + E + ++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 577 EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN 633
EF EA+ + + HH +R + +G+ L++ + M +G L S+L + PE N
Sbjct: 65 EFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 634 -------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-L 685
+ + +A IA G+ YL+ + +H +L + N ++ E +I DFG++R +
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 686 MXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + +PE K T +DV+S GV++ E+ T
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 17/248 (6%)
Query: 526 GPFLFTADDLLCATAEIMGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAE 581
GP + +D +GK +G Y A + + A+K L + + + + E
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 582 AAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIA 641
+ HPN+L L Y+ L+ ++ P G++ L AT ++
Sbjct: 59 VEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-- 115
Query: 642 IGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL 701
+A L+Y H + +IH ++ N+LL +IADFG S L
Sbjct: 116 -ELANALSYCH-SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTL 170
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEV 761
Y PE+ + + + K D++SLGV+ E L GK P E + + ++ + E+T
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPD 227
Query: 762 FDLELMRD 769
F E RD
Sbjct: 228 FVTEGARD 235
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR-AYY 600
+G +G YKA E G+ A K + K+ + +++ E + HP ++ L AYY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHA--RG-PETIVNWATRMSIAIGIARGLNYLHVEENM 657
G+ ++ +F P G++ + + RG E + R + LN+LH + +
Sbjct: 79 HD--GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH-SKRI 130
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL---SKL 711
IH +L + NVL+ + + R+ADFG+S +G + APE+ +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 712 KNA--NTKTDVYSLGVIILELLTGKSPGEPMNGM 743
K+ + K D++SLG+ ++E+ + P +N M
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 476
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 477 LRSFLQVR--KFSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLG 533
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 28/232 (12%)
Query: 524 FDGPFLFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKTT 572
F ++ D+ A +I +G+ ++G Y K ++D E VA+K + E +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 573 KGQK-EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGP 628
++ EF EA+ + + HH +R + +G+ L++ + M +G L S+L + P
Sbjct: 63 MRERIEFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 118
Query: 629 ETIVN-------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681
E N + + +A IA G+ YL+ + +H +L + N ++ E +I DFG
Sbjct: 119 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 682 LSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
++R + + + +PE K T +DV+S GV++ E+ T
Sbjct: 178 MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 103 --YFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 156
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLAL 596
+ +G T+G E G +VAVK L + + + E + HP+++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
P + +V +++ G L ++ G ++ + I G++Y H
Sbjct: 82 YQVISTP-SDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH-RHM 136
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNAN 715
++H +L NVLLD N +IADFGLS +M Y APE +S A
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSP--NYAAPEVISGRLYAG 194
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+ D++S GVI+ LL G P
Sbjct: 195 PEVDIWSSGVILYALLCGTLP 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 562 VAVKRLREKTTKGQKE-FEAEAAAIGKIHHPNLLALRAYYLGPKGEK--LLVFDFMPKGS 618
VA+K + T+ +E F EA + + HP+++ L +G E ++ + G
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL----IGVITENPVWIIMELCTLGE 476
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678
L SFL R + ++ A+ + A ++ L YL + +H ++ + NVL+ ++
Sbjct: 477 LRSFLQVR--KFSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSATDCVKLG 533
Query: 679 DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELL 731
DFGLSR M + + APE + + +DV+ GV + E+L
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ ++ KG+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 174
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 233
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 293
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 294 LMWEIFTLGGSP 305
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 96 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 149
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 95 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 148
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPP 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR-AYY 600
+G +G YKA E G+ A K + K+ + +++ E + HP ++ L AYY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 601 LGPKGEKLLVFDFMPKGSLASFLHA--RG-PETIVNWATRMSIAIGIARGLNYLHVEENM 657
G+ ++ +F P G++ + + RG E + R + LN+LH + +
Sbjct: 87 HD--GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH-SKRI 138
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL---SKL 711
IH +L + NVL+ + + R+ADFG+S +G + APE+ +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 712 KNA--NTKTDVYSLGVIILELLTGKSPGEPMNGM 743
K+ + K D++SLG+ ++E+ + P +N M
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 80 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 133
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPP 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 99 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 152
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPP 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 101 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 154
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPP 236
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 28/232 (12%)
Query: 524 FDGPFLFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKTT 572
F ++ D+ A +I +G+ ++G Y K ++D E VA+K + E +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 573 KGQK-EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGP 628
++ EF EA+ + + HH +R + +G+ L++ + M +G L S+L + P
Sbjct: 63 MRERIEFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 118
Query: 629 ETIVN-------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681
E N + + +A IA G+ YL+ + +H +L + N ++ E +I DFG
Sbjct: 119 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 682 LSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
++R + + + +PE K T +DV+S GV++ E+ T
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 75 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 128
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 76 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 129
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPP 211
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 98 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 75 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 129
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 95 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 148
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPP 230
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 238
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 130
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 188
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 236
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 236
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 82
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 83 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H NL + N ++ +I DFG++R + + +
Sbjct: 142 DGMAYLNAKK-FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 130
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 74 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 127
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPP 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 81 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 240
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 81 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 240
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 80 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 134
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTTKGQ-KEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T+ + +E + I H N++ L G ++ ++ KG+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 81
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H NL + N ++ +I DFG++R + + +
Sbjct: 141 DGMAYLNAKK-FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 98 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 130
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 235
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 77 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 131
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 236
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 99 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 152
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPP 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 73 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 126
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 96 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 149
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 98 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 130
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 96 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 149
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 98 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPP 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 559 GSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614
G EVA+K + +KT T QK F E + ++HPN++ L + + L+ ++
Sbjct: 40 GREVAIKII-DKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEV-IETEKTLYLIMEYA 96
Query: 615 PKGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARSKFRQ-----IVSAVQYCH-QKRIVHRDLKAENLLLDAD 150
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELL 731
N +IADFG S Y APEL + K + + DV+SLGVI+ L+
Sbjct: 151 MNIKIADFGFSNEFTVGGKLDAFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Query: 732 TGKSPGEPMNGMDLPQWV 749
+G P + N +L + V
Sbjct: 209 SGSLPFDGQNLKELRERV 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 78 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 132
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 96 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 149
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF---EAEAAAIGKIHHPNLLAL 596
+I+G+ ++ T A L E A+K L ++ + + E + ++ HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 597 RAYYLGPKGEKLLV-FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y+ EKL + G L ++ G + TR A I L YLH +
Sbjct: 98 --YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTA-EIVSALEYLH-GK 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG-YRAPELSKLKNA 714
+IH +L N+LL+E + +I DFG ++++ Y +PEL K+A
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+D+++LG II +L+ G P
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 76 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 130
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 235
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 73 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 127
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 232
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK-EFEAEAAAIGKI--HHPNL 593
+G+ ++G Y K ++D E VA+K + E + ++ EF EA+ + + HH
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--- 74
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + +G+ L++ + M +G L S+L + PE N + + +A IA
Sbjct: 75 -VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ + +H +L + N ++ E +I DFG++R + + +
Sbjct: 134 DGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
+PE K T +DV+S GV++ E+ T
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKG--QKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ +YG +K D G VA+K+ E +K E + ++ HPNL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 600 YLGPKGEKLLVFDFMPKGSLASF-LHARG-PETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ K LVF++ L + RG PE +V SI + +N+ H + N
Sbjct: 71 FRR-KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNFCH-KHNC 123
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANT 716
IH ++ N+L+ + + ++ DFG +RL+ YR+PE L
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW-YRSPELLVGDTQYGP 182
Query: 717 KTDVYSLGVIILELLTG 733
DV+++G + ELL+G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 58/332 (17%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 43 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 102
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXX 192
L L NL G+ LFNN+++ P + N NL L+LS+N I I
Sbjct: 103 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS------------ 145
Query: 193 XXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLI 252
+L+ L SL L+ N ++ P LA + L+ L++ N +
Sbjct: 146 -------------ALSGLTSLQQLSFSSNQVTDLKP-----LANLTT--LERLDISSNKV 185
Query: 253 AGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVTFT 309
+ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 186 SD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----TLA 236
Query: 310 NITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSE 369
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L+E
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNE 292
Query: 370 NDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
N +ISP +++L NLT + +NN+S P
Sbjct: 293 NQL-EDISP-ISNLKNLTYLTLYFNNISDISP 322
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 29 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 86
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 87 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 125
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 559 GSEVAVK---RLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G EVAVK + + ++ QK F E + ++HPN++ L + + LV ++
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 616 KGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCH-QKFIVHRDLKAENLLLDADM 150
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELLT 732
N +IADFG S Y APEL + K + + DV+SLGVI+ L++
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 733 GKSPGEPMNGMDLPQWV 749
G P + N +L + V
Sbjct: 209 GSLPFDGQNLKELRERV 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 559 GSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614
G EVAVK + +KT T QK F E + ++HPN++ L + + LV ++
Sbjct: 40 GREVAVKII-DKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYA 96
Query: 615 PKGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCH-QKYIVHRDLKAENLLLDGD 150
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELL 731
N +IADFG S Y APEL + K + + DV+SLGVI+ L+
Sbjct: 151 MNIKIADFGFSNEFTVGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Query: 732 TGKSPGEPMNGMDLPQWV 749
+G P + N +L + V
Sbjct: 209 SGSLPFDGQNLKELRERV 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 559 GSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614
G EVAV R+ +KT + QK F E + ++HPN++ L + + LV ++
Sbjct: 39 GKEVAV-RIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYA 95
Query: 615 PKGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCH-QKFIVHRDLKAENLLLDAD 149
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELL 731
N +IADFG S Y APEL + K + + DV+SLGVI+ L+
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Query: 732 TGKSPGEPMNGMDLPQWV 749
+G P + N +L + V
Sbjct: 208 SGSLPFDGQNLKELRERV 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 559 GSEVAVK---RLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G EVAVK + + ++ QK F E + ++HPN++ L + + LV ++
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 616 KGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCH-QKFIVHRDLKAENLLLDADM 150
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELLT 732
N +IADFG S Y APEL + K + + DV+SLGVI+ L++
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 733 GKSPGEPMNGMDLPQWV 749
G P + N +L + V
Sbjct: 209 GSLPFDGQNLKELRERV 225
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 58/332 (17%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 43 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 102
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXX 192
L L NL G+ LFNN+++ P + N NL L+LS+N I I
Sbjct: 103 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNT-ISDIS------------ 145
Query: 193 XXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLI 252
+L+ L SL L+ N ++ P LA + L+ L++ N +
Sbjct: 146 -------------ALSGLTSLQQLSFSSNQVTDLKP-----LANLTT--LERLDISSNKV 185
Query: 253 AGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVTFT 309
+ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 186 SD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----TLA 236
Query: 310 NITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSE 369
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L+E
Sbjct: 237 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNE 292
Query: 370 NDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
N +ISP +++L NLT + +NN+S P
Sbjct: 293 NQL-EDISP-ISNLKNLTYLTLYFNNISDISP 322
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 29 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 86
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 87 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 125
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 559 GSEVAVK---RLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G EVAVK + + ++ QK F E + ++HPN++ L + + LV ++
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 616 KGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCH-QKFIVHRDLKAENLLLDADM 150
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELLT 732
N +IADFG S Y APEL + K + + DV+SLGVI+ L++
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 733 GKSPGEPMNGMDLPQWV 749
G P + N +L + V
Sbjct: 209 GSLPFDGQNLKELRERV 225
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 238
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 559 GSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614
G EVA+K + +KT T QK F E + ++HPN++ L + + L+ ++
Sbjct: 37 GREVAIKII-DKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEV-IETEKTLYLIMEYA 93
Query: 615 PKGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 94 SGGEVFDYLVAHGRMKEKEARSKFRQ-----IVSAVQYCH-QKRIVHRDLKAENLLLDAD 147
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELL 731
N +IADFG S Y APEL + K + + DV+SLGVI+ L+
Sbjct: 148 MNIKIADFGFSNEFTVGGKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLV 205
Query: 732 TGKSPGEPMNGMDLPQWV 749
+G P + N +L + V
Sbjct: 206 SGSLPFDGQNLKELRERV 223
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK-EFEAEAAAIGKI--HHPNL 593
+G+ ++G Y K ++D E VA+K + E + ++ EF EA+ + + HH
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--- 76
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + +G+ L++ + M +G L S+L + PE N + + +A IA
Sbjct: 77 -VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ + +H +L + N ++ E +I DFG++R + + +
Sbjct: 136 DGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
+PE K T +DV+S GV++ E+ T
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNLLAL-RA 598
+G +G YKA ++ S +A ++ + TK ++E E E + HPN++ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 599 YYLGPKGEKLLVFDFMPKGSL-ASFLHARGP--ETIVNWATRMSIAIGIARGLNYLHVEE 655
+Y + ++ +F G++ A L P E+ + + ++ LNYLH +
Sbjct: 103 FYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLH-DN 154
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL---- 708
+IH +L + N+L + ++ADFG+S +G + APE+
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 709 -SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
SK + + K DV+SLG+ ++E+ + P +N M
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM 246
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK-EFEAEAAAIGKI--HHPNL 593
+G+ ++G Y K ++D E VA+K + E + ++ EF EA+ + + HH
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--- 82
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + +G+ L++ + M +G L S+L + PE N + + +A IA
Sbjct: 83 -VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ + +H +L + N ++ E +I DFG++R + + +
Sbjct: 142 DGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
+PE K T +DV+S GV++ E+ T
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 81 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 135
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE + + + K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 559 GSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614
G EVAV R+ +KT + QK F E + ++HPN++ L + + LV ++
Sbjct: 39 GKEVAV-RIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYA 95
Query: 615 PKGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAVQYCH-QKFIVHRDLKAENLLLDAD 149
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELL 731
N +IADFG S Y APEL + K + + DV+SLGVI+ L+
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDEFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Query: 732 TGKSPGEPMNGMDLPQWV 749
+G P + N +L + V
Sbjct: 208 SGSLPFDGQNLKELRERV 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 102 YFHD-ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 156
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 261
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK-EFEAEAAAIGKI--HHPNL 593
+G+ ++G Y K ++D E VA+K + E + ++ EF EA+ + + HH
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--- 82
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + +G+ L++ + M +G L S+L + PE N + + +A IA
Sbjct: 83 -VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ + +H +L + N ++ E +I DFG++R + + +
Sbjct: 142 DGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
+PE K T +DV+S GV++ E+ T
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ + KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVGYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNLLAL-RA 598
+G +G YKA ++ S +A ++ + TK ++E E E + HPN++ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 599 YYLGPKGEKLLVFDFMPKGSL-ASFLHARGP--ETIVNWATRMSIAIGIARGLNYLHVEE 655
+Y + ++ +F G++ A L P E+ + + ++ LNYLH +
Sbjct: 103 FYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLH-DN 154
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL---- 708
+IH +L + N+L + ++ADFG+S +G + APE+
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 709 -SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
SK + + K DV+SLG+ ++E+ + P +N M
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM 246
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 11/182 (6%)
Query: 559 GSEVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G +VAVK L + + + + E + HP+++ L P + +V +++
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT-DFFMVMEYVS 94
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
G L ++ G V + I ++Y H ++H +L NVLLD N
Sbjct: 95 GGELFDYICKHGR---VEEMEARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNA 150
Query: 676 RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTKTDVYSLGVIILELLTGK 734
+IADFGLS +M Y APE +S A + D++S GVI+ LL G
Sbjct: 151 KIADFGLSNMMSDGEFLRTSCGSP--NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
Query: 735 SP 736
P
Sbjct: 209 LP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 93 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 147
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 252
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 562 VAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKGSL 619
VAVK L++ T K + +E + I H N++ L G ++ + KG+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVAYASKGNL 128
Query: 620 ASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666
+L AR P E + + +S +ARG+ YL + IH +L + N
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDLAARN 187
Query: 667 VLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGV 725
VL+ E +IADFGL+R + + + APE + ++DV+S GV
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 726 IILELLT-GKSP 736
++ E+ T G SP
Sbjct: 248 LMWEIFTLGGSP 259
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 11/182 (6%)
Query: 559 GSEVAVKRLREKTTKGQK---EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G +VAVK L + + + + E + HP+++ L P + +V +++
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT-DFFMVMEYVS 94
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
G L ++ G V + I ++Y H ++H +L NVLLD N
Sbjct: 95 GGELFDYICKHGR---VEEMEARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNA 150
Query: 676 RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKNANTKTDVYSLGVIILELLTGK 734
+IADFGLS +M Y APE +S A + D++S GVI+ LL G
Sbjct: 151 KIADFGLSNMMSDGEFLRDSCGSP--NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
Query: 735 SP 736
P
Sbjct: 209 LP 210
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 605 GEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
GE + + M GSL L G PE I+ ++I + +GL YL + ++H ++
Sbjct: 139 GEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMHRDV 193
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
SN+L++ + ++ DFG+S + Y +PE + + + ++D++S
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYSVQSDIWS 250
Query: 723 LGVIILELLTGKSPGEPMNGMDL 745
+G+ ++E+ G+ P P + +L
Sbjct: 251 MGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNLLAL-RA 598
+G +G YKA ++ S +A ++ + TK ++E E E + HPN++ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID--TKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 599 YYLGPKGEKLLVFDFMPKGSL-ASFLHARGP--ETIVNWATRMSIAIGIARGLNYLHVEE 655
+Y + ++ +F G++ A L P E+ + + ++ LNYLH +
Sbjct: 103 FYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLH-DN 154
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL---- 708
+IH +L + N+L + ++ADFG+S +G + APE+
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 709 -SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743
SK + + K DV+SLG+ ++E+ + P +N M
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM 246
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 523 HFDGPFLFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKT 571
+F ++ D+ A +I +G+ ++G Y K ++D E VA+K + E
Sbjct: 8 YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67
Query: 572 TKGQK-EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARG 627
+ ++ EF EA+ + + HH +R + +G+ L++ + M +G L S+L +
Sbjct: 68 SMRERIEFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 628 PETIVN-------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADF 680
P N + + +A IA G+ YL+ + +H +L + N ++ E +I DF
Sbjct: 124 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDF 182
Query: 681 GLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
G++R + + + +PE K T +DV+S GV++ E+ T
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEE 655
A+Y GE + + M GSL L G PE I+ ++I + +GL YL +
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH 124
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
++H ++ SN+L++ + ++ DFG+S + Y +PE + + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYS 181
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++D++S+G+ ++E+ G+ P P + +L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEE 655
A+Y GE + + M GSL L G PE I+ ++I + +GL YL +
Sbjct: 72 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH 124
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
++H ++ SN+L++ + ++ DFG+S + Y +PE + + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYS 181
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++D++S+G+ ++E+ G+ P P + +L
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 605 GEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
GE + + M GSL L G PE I+ ++I + +GL YL + ++H ++
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMHRDV 131
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
SN+L++ + ++ DFG+S + Y +PE + + + ++D++S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYSVQSDIWS 188
Query: 723 LGVIILELLTGKSPGEPMNGMDL 745
+G+ ++E+ G+ P P + +L
Sbjct: 189 MGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEE 655
A+Y GE + + M GSL L G PE I+ ++I + +GL YL +
Sbjct: 99 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH 151
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
++H ++ SN+L++ + ++ DFG+S + Y +PE + + +
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYS 208
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
++D++S+G+ ++E+ G+ P P + +L
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 102 YFHD-ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 156
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 261
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 605 GEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
GE + + M GSL L G PE I+ ++I + +GL YL + ++H ++
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMHRDV 131
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
SN+L++ + ++ DFG+S + Y +PE + + + ++D++S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYSVQSDIWS 188
Query: 723 LGVIILELLTGKSPGEPMNGMDL 745
+G+ ++E+ G+ P P + +L
Sbjct: 189 MGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEE 655
A+Y GE + + M GSL L G PE I+ ++I + +GL YL +
Sbjct: 91 AFY--SDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH 143
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
++H ++ SN+L++ + ++ DFG+S + Y +PE + + +
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYS 200
Query: 716 TKTDVYSLGVIILELLTGKSP-GEPMNGMDLPQWVASIVKE---EWTNEVFDLEL 766
++D++S+G+ ++E+ G+ P G M + + + IV E + + VF LE
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEF 255
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKG----QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + ++ KT + + E + HPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 80 YF-HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---ELANALSYCH-SKRVI 134
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L G P E + + ++ + E+T F E RD
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---EFTFPDFVTEGARD 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 559 GSEVAVK---RLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G EVAVK + + ++ QK F E ++HPN++ L + + LV ++
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEV-IETEKTLYLVXEYAS 96
Query: 616 KGSLASFL--HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
G + +L H R E R I + Y H ++ ++H +L + N+LLD
Sbjct: 97 GGEVFDYLVAHGRXKEKEARAKFRQ-----IVSAVQYCH-QKFIVHRDLKAENLLLDADX 150
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELLT 732
N +IADFG S Y APEL + K + + DV+SLGVI+ L++
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 733 GKSPGEPMNGMDLPQWV 749
G P + N +L + V
Sbjct: 209 GSLPFDGQNLKELRERV 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K L+++ + E E + HP L
Sbjct: 14 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L+YLH
Sbjct: 71 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLHS 126
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
E+N+++ +L N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 564 VKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPKGSLASF 622
V+ LRE T K E + K+ HPN++ L+ Y LVFD M KG L +
Sbjct: 50 VQELREATLK-------EVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDY 101
Query: 623 LHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGL 682
L + T+ TR I + + LH + N++H +L N+LLD+ N ++ DFG
Sbjct: 102 LTEKV--TLSEKETR-KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 683 SRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN-----TKTDVYSLGVIILELLTGKSP 736
S + Y APE+ + N N + D++S GVI+ LL G P
Sbjct: 158 SCQLDPGEKLREVCGTP--SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKG----QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + ++ KT + + E + HPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 80 YF-HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---ELANALSYCH-SKRVI 134
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IADFG S L Y PE+ + + + K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L G P E + + ++ + E+T F E RD
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV---EFTFPDFVTEGARD 239
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 81
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H +L + N ++ +I DFG++R + + +
Sbjct: 141 DGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ ++ ++E E E + + ++ HPN++ L Y + + +L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL + ++ S I G+NYLH ++ + H +L N++L +K
Sbjct: 96 LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDK 151
Query: 673 TNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
P ++ DFGL+ + + APE+ + + D++S+GVI
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 78
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 79 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H +L + N ++ +I DFG++R + + +
Sbjct: 138 DGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K L+++ + E E + HP L
Sbjct: 16 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L+YLH
Sbjct: 73 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLHS 128
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
E+N+++ +L N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 81
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H +L + N ++ +I DFG++R + + +
Sbjct: 141 DGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K L+++ + E E + HP L
Sbjct: 15 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L+YLH
Sbjct: 72 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLHS 127
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
E+N+++ +L N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 564 VKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPKGSLASF 622
V+ LRE T K E + K+ HPN++ L+ Y LVFD M KG L +
Sbjct: 63 VQELREATLK-------EVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDY 114
Query: 623 LHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGL 682
L + T+ TR I + + LH + N++H +L N+LLD+ N ++ DFG
Sbjct: 115 LTEKV--TLSEKETR-KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 683 SRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN-----TKTDVYSLGVIILELLTGKSP 736
S + Y APE+ + N N + D++S GVI+ LL G P
Sbjct: 171 SCQLDPGEKLRSVCGTP--SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 564 VKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPKGSLASF 622
V+ LRE T K E + K+ HPN++ L+ Y LVFD M KG L +
Sbjct: 63 VQELREATLK-------EVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDY 114
Query: 623 LHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGL 682
L + T+ TR I + + LH + N++H +L N+LLD+ N ++ DFG
Sbjct: 115 LTEKV--TLSEKETR-KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 683 SRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN-----TKTDVYSLGVIILELLTGKSP 736
S + Y APE+ + N N + D++S GVI+ LL G P
Sbjct: 171 SCQLDPGEKLREVCGTP--SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 81
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H +L + N ++ +I DFG++R + + +
Sbjct: 141 DGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 81
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H +L + N ++ +I DFG++R + + +
Sbjct: 141 DGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT+ G VAVK++ + + ++ E + H N++ + YL
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + + L+ LH + +IH
Sbjct: 92 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ-GVIH 143
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APEL + D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 202
Query: 720 VYSLGVIILELLTGKSP 736
++SLG++++E++ G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 60/333 (18%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 43 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 102
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXX 192
L L NL G+ LFNN+++ P + N NL L+LS+N
Sbjct: 103 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN------------------- 139
Query: 193 XXXXXXXXGSIPLSLTRLPSLSVL-ALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNL 251
+++ + +LS L +LQ N S + + LA + L+ L++ N
Sbjct: 140 -------------TISDISALSGLTSLQQLNFSSNQVTDLKPLANLTT--LERLDISSNK 184
Query: 252 IAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVTF 308
++ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 185 VSD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----TL 235
Query: 309 TNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLS 368
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L+
Sbjct: 236 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 291
Query: 369 ENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
EN +ISP +++L NLT + +NN+S P
Sbjct: 292 ENQL-EDISP-ISNLKNLTYLTLYFNNISDISP 322
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 29 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 86
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 87 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 125
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 529 LFTADDLLCATAEI-----MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK- 576
++ D+ A +I +G+ ++G Y K ++D E VA+K + E + ++
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 577 EFEAEAAAIGKI--HHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN 633
EF EA+ + + HH +R + +G+ L++ + M +G L S+L + PE N
Sbjct: 61 EFLNEASVMKEFNCHH----VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 634 -------WATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-L 685
+ + +A IA G+ YL+ + +H +L + N + E +I DFG++R +
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 686 MXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + +PE K T +DV+S GV++ E+ T
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K L+++ + E E + HP L
Sbjct: 154 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L+YLH
Sbjct: 211 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLHS 266
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
E+N+++ +L N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSE-VAVKRL----REKTTKG-QKEFEAEAAAIGKIHHPNLL 594
+ +G+ + T YKA ++ ++ VA+K++ R + G + E + ++ HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 595 ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
L + G K LVFDFM + L + + ++ + + + +GL YLH +
Sbjct: 76 GLLDAF-GHKSNISLVFDFM-ETDLEVII--KDNSLVLTPSHIKAYMLMTLQGLEYLH-Q 130
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKN 713
++H +L +N+LLDE ++ADFGL++ YRAPE L +
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-YRAPELLFGARM 189
Query: 714 ANTKTDVYSLGVIILELL 731
D++++G I+ ELL
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT+ G VAVK++ + + ++ E + H N++ + YL
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + + L+ LH + +IH
Sbjct: 99 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ-GVIH 150
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APEL + D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 209
Query: 720 VYSLGVIILELLTGKSP---GEPMNGMDL 745
++SLG++++E++ G+ P P+ M +
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKM 238
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + T + I
Sbjct: 69 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILN 124
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 125 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 181
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K L+++ + E E + HP L
Sbjct: 157 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L+YLH
Sbjct: 214 TALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLHS 269
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
E+N+++ +L N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + T + I
Sbjct: 70 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILN 125
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 126 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 182
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP--AFVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + T + I
Sbjct: 69 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILN 124
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 125 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 181
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT+ G VAVK++ + + ++ E + H N++ + YL
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + + L+ LH + +IH
Sbjct: 97 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ-GVIH 148
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APEL + D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 207
Query: 720 VYSLGVIILELLTGKSP---GEPMNGMDL 745
++SLG++++E++ G+ P P+ M +
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPPLKAMKM 236
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 559 GSEVAVK---RLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615
G EVAVK + + ++ QK F E + ++HPN++ L + + LV ++
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 89
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIG---IARGLNYLHVEENMIHGNLTSSNVLLDEK 672
G + +L A G W I + Y H ++ ++H +L + N+LLD
Sbjct: 90 GGEVFDYLVAHG------WMKEKEARAKFRQIVSAVQYCH-QKFIVHRDLKAENLLLDAD 142
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN-TKTDVYSLGVIILELL 731
N +IADFG S Y APEL + K + + DV+SLGVI+ L+
Sbjct: 143 MNIKIADFGFSNEFTFGNKLDTFCGSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLV 200
Query: 732 TGKSPGEPMNGMDLPQWV 749
+G P + N +L + V
Sbjct: 201 SGSLPFDGQNLKELRERV 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 543 MGKSTYGT---AYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ ++G AY T G +VA+K + +K + Q E E + + + HP+++ L
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ K E ++V ++ L ++ R + + R I + Y H
Sbjct: 74 YDV-IKSKDEIIMVIEY-AGNELFDYIVQR--DKMSEQEARRFFQ-QIISAVEYCH-RHK 127
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN 715
++H +L N+LLDE N +IADFGLS +M Y APE+ K A
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 185
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+ DV+S GVI+ +L + P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 559 GSEVAVKRLREKTTKGQK--EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMP 615
G VA+K + +K T G + E A+ + H ++ L Y++ K+ +V ++ P
Sbjct: 35 GEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQL--YHVLETANKIFMVLEYCP 91
Query: 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP 675
G L ++ ++ + + TR+ + I + Y+H + H +L N+L DE
Sbjct: 92 GGELFDYIISQ--DRLSEEETRV-VFRQIVSAVAYVH-SQGYAHRDLKPENLLFDEYHKL 147
Query: 676 RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGK 734
++ DFGL L Y APEL + K+ ++ DV+S+G+++ L+ G
Sbjct: 148 KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 735 SPGEPMNGM-----------DLPQWVA 750
P + N M D+P+W++
Sbjct: 208 LPFDDDNVMALYKKIMRGKYDVPKWLS 234
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKG---QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + + + E + HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 79 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 133
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IA+FG S L Y PE+ + + + K
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 238
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRL-REKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
+GK +G Y A + + A+K L + + K + + E + HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMI 658
Y+ L+ ++ P G++ L AT ++ +A L+Y H + +I
Sbjct: 78 YF-HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT---ELANALSYCH-SKRVI 132
Query: 659 HGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKT 718
H ++ N+LL +IA+FG S L Y PE+ + + + K
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 719 DVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRD 769
D++SLGV+ E L GK P E + + ++ + E+T F E RD
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARD 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
MP G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 MPGGDM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ADFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + T + I
Sbjct: 70 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILN 125
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 126 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 182
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAYKATLED------GSEVAVKRLREKTTKGQK-EFEAEAAAIG--KIHHPNL 593
+G+ ++G Y+ D + VAVK + E + ++ EF EA+ + HH
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--- 80
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + KG+ L+V + M G L S+L + PE N + +A IA
Sbjct: 81 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ ++ +H +L + N ++ +I DFG++R + + +
Sbjct: 140 DGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
APE K T +D++S GV++ E+ +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 543 MGKSTYGT---AYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ ++G AY T G +VA+K + +K + Q E E + + + HP+++ L
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ K E ++V ++ L ++ R + + R I + Y H
Sbjct: 79 YDV-IKSKDEIIMVIEY-AGNELFDYIVQR--DKMSEQEARRFFQ-QIISAVEYCH-RHK 132
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN 715
++H +L N+LLDE N +IADFGLS +M Y APE+ K A
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 190
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+ DV+S GVI+ +L + P
Sbjct: 191 PEVDVWSCGVILYVMLCRRLP 211
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT+ G VAVK++ + + ++ E + H N++ + YL
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + + L+ LH + +IH
Sbjct: 88 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ-GVIH 139
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APEL + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 198
Query: 720 VYSLGVIILELLTGKSP---GEPMNGMDL 745
++SLG++++E++ G+ P P+ M +
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKM 227
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 543 MGKSTYGT---AYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ ++G AY T G +VA+K + +K + Q E E + + + HP+++ L
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ K E ++V ++ L ++ R + + R I + Y H
Sbjct: 70 YDV-IKSKDEIIMVIEY-AGNELFDYIVQR--DKMSEQEARRFFQ-QIISAVEYCH-RHK 123
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN 715
++H +L N+LLDE N +IADFGLS +M Y APE+ K A
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 181
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+ DV+S GVI+ +L + P
Sbjct: 182 PEVDVWSCGVILYVMLCRRLP 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + T + I
Sbjct: 70 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILN 125
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 126 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 182
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 543 MGKSTYGT---AYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLAL 596
+G+ ++G AY T G +VA+K + +K + Q E E + + + HP+++ L
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ K E ++V ++ L ++ R + + R I + Y H
Sbjct: 80 YDV-IKSKDEIIMVIEY-AGNELFDYIVQR--DKMSEQEARRFFQ-QIISAVEYCH-RHK 133
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN 715
++H +L N+LLDE N +IADFGLS +M Y APE+ K A
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVISGKLYAG 191
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+ DV+S GVI+ +L + P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 542 IMGKSTYGTAYKATLEDGSEV----AVKRLRE----KTTKGQKEFEAEAAAIGKIHHPNL 593
++GK YG ++ G+ A+K L++ + K +AE + ++ HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNY 650
+ L Y G+ L+ +++ G L L G +T + +S+A+G +
Sbjct: 84 VDL-IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------H 136
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 710
LH ++ +I+ +L N++L+ + + ++ DFGL + + Y APE+
Sbjct: 137 LH-QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 711 LKNANTKTDVYSLGVIILELLTGKSP 736
N D +SLG ++ ++LTG P
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
RGL Y+H +IH +L SNV ++E + RI DFGL+R YRA
Sbjct: 142 RGLKYIH-SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRA 196
Query: 706 PELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
PE+ + N D++S+G I+ ELL GK+ PG
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 542 IMGKSTYGTAYKATLEDGSEV----AVKRLRE----KTTKGQKEFEAEAAAIGKIHHPNL 593
++GK YG ++ G+ A+K L++ + K +AE + ++ HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNY 650
+ L Y G+ L+ +++ G L L G +T + +S+A+G +
Sbjct: 84 VDL-IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------H 136
Query: 651 LHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK 710
LH ++ +I+ +L N++L+ + + ++ DFGL + + Y APE+
Sbjct: 137 LH-QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 711 LKNANTKTDVYSLGVIILELLTGKSP 736
N D +SLG ++ ++LTG P
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT+ G VAVK++ + + ++ E + H N++ + YL
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + + L+ LH + +IH
Sbjct: 142 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ-GVIH 193
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APEL + D
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 252
Query: 720 VYSLGVIILELLTGKSP 736
++SLG++++E++ G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
RGL Y+H +IH +L SNV ++E + RI DFGL+R YRA
Sbjct: 142 RGLKYIH-SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWYRA 196
Query: 706 PELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
PE+ + N D++S+G I+ ELL GK+ PG
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + T + I
Sbjct: 70 EIQHPNVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILN 125
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 126 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 182
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E + +I DFGL+R Y
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E + +I DFGL+R Y
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 605 GEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662
GE + + M GSL L G PE I+ ++I + +GL YL + ++H ++
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMHRDV 131
Query: 663 TSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYS 722
SN+L++ + ++ DFG+S + Y +PE + + + ++D++S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQGTHYSVQSDIWS 188
Query: 723 LGVIILELLTGKSPGEP 739
+G+ ++E+ G+ P P
Sbjct: 189 MGLSLVEMAVGRYPIPP 205
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
E +G YG A G +VA+K++ + T ++ E + H N++A+
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAI 119
Query: 597 RAYYLG--PKGE---KLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
+ P GE +V D M + L +H+ P T+ + + + RGL Y+
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFL---YQLLRGLKYM 175
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL 708
H +IH +L SN+L++E +I DFG++R + + YRAPEL
Sbjct: 176 H-SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 709 S-KLKNANTKTDVYSLGVIILELLTGKS--PGE 738
L D++S+G I E+L + PG+
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 543 MGKSTYGTAY----KATLEDGSE--VAVKRLREKTTKGQK-EFEAEAAAIGKI--HHPNL 593
+G+ ++G Y K ++D E VA+K + E + ++ EF EA+ + + HH
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--- 79
Query: 594 LALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVN-------WATRMSIAIGIA 645
+R + +G+ L++ + M +G L S+L + P N + + +A IA
Sbjct: 80 -VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYR 704
G+ YL+ + +H +L + N ++ E +I DFG++R + + +
Sbjct: 139 DGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 705 APELSKLKNANTKTDVYSLGVIILELLT 732
+PE K T +DV+S GV++ E+ T
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWY 195
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+GK YG +K+ G VAVK++ + +T Q+ F H N++ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 599 YYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ LVFD+M LHA I+ + + + + + YLH +
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLH-SGGL 130
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXX--------------------XXX 697
+H ++ SN+LL+ + + ++ADFGLSR
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 698 XXXLGYRAPELSKLKNANTK-TDVYSLGVIILELLTGK 734
YRAPE+ TK D++SLG I+ E+L GK
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWY 195
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWY 195
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 543 MGKSTYGTAYKA-TLEDGSEVAVKRLRE--KTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G YG+ A + G VAVK+L ++ K E + + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 600 YLGPKGEKLLVFDFMPKGSLASF------LHARGPE--TIVNWATRMS-----IAIGIAR 646
F P SL F H G + IV A + I R
Sbjct: 86 -------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILR 132
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
GL Y+H ++IH +L SN+ ++E +I DFGL+R YRAP
Sbjct: 133 GLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAP 187
Query: 707 ELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
E+ + N D++S+G I+ ELLTG++ PG
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 184
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 184
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
RGL Y+H +IH +L SNV ++E RI DFGL+R YRA
Sbjct: 134 RGLKYIH-SAGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRA 188
Query: 706 PELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
PE+ + N D++S+G I+ ELL GK+ PG
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 132 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 186
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 131 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 185
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 144 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 198
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
MP G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 MPGGDM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ADFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 130 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWY 184
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 140 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 194
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 136 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 190
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 141 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 195
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 153 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 207
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 153 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 207
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 146 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 200
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 146 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 200
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 146 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 200
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 131 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 185
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 154 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 208
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 145 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 199
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELSKLKNA---NTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + NA N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEI--MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 13/226 (5%)
Query: 542 IMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI----HHPNLLAL 596
++GK ++G A + E G AVK L++ + E + +HP L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ P V +F+ G L H + R A I L +LH ++
Sbjct: 90 FCCFQTPD-RLFFVMEFVNGGDL--MFHIQKSRRFDEARARF-YAAEIISALMFLH-DKG 144
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+I+ +L NVLLD + + ++ADFG+ + Y APE+ +
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 717 KTDVYSLGVIILELLTGKSPGEPMNGMDLPQWV--ASIVKEEWTNE 760
D +++GV++ E+L G +P E N DL + + +V W +E
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 133 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 187
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 224
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 154 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 208
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 163 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 217
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 157 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWY 211
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 154 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGXVATRWY 208
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
E +G YG A G +VA+K++ + T ++ E + H N++A+
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAI 118
Query: 597 RAYYLG--PKGE---KLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
+ P GE +V D M + L +H+ P T+ + + + RGL Y+
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFL---YQLLRGLKYM 174
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPEL 708
H +IH +L SN+L++E +I DFG++R + + YRAPEL
Sbjct: 175 H-SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 709 S-KLKNANTKTDVYSLGVIILELLTGKS--PGE 738
L D++S+G I E+L + PG+
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 543 MGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ + G AT+ G VAVK++ + + ++ E + H N++ + YL
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 602 GPKGEKL-LVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
G++L +V +F+ G+L + H R +N ++ + + + L+ LH + +IH
Sbjct: 219 --VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ-GVIH 270
Query: 660 GNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTD 719
++ S ++LL +++DFG + + APEL + D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVD 329
Query: 720 VYSLGVIILELLTGKSP---GEPMNGMDL 745
++SLG++++E++ G+ P P+ M +
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPPLKAMKM 358
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E + +I DFGL R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 139 ILRGLKYIH-SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 193
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLH--------ARGPETIV 632
E + K+H +++L AY K + LV M G + ++ + P I
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXX 692
A I GL +LH + N+I+ +L NVLLD+ N RI+D GL+ +
Sbjct: 294 YTAQ-------IVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQT 344
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP----GEPMNGMDLPQW 748
G+ APEL + + D ++LGV + E++ + P GE + +L Q
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 749 V 749
V
Sbjct: 405 V 405
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 157 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGYVATRWY 211
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 145 ILRGLKYIH-SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 199
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DFGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
AY K LV M G L ++ G A + A I GL LH E +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE-ARAVFYAAEICCGLEDLH-RERI 307
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
++ +L N+LLD+ + RI+D GL+ + +GY APE+ K +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 718 TDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
D ++LG ++ E++ G+SP + + V +VKE
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLH--------ARGPETIV 632
E + K+H +++L AY K + LV M G + ++ + P I
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXX 692
A I GL +LH + N+I+ +L NVLLD+ N RI+D GL+ +
Sbjct: 294 YTAQ-------IVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQT 344
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP----GEPMNGMDLPQW 748
G+ APEL + + D ++LGV + E++ + P GE + +L Q
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 749 V 749
V
Sbjct: 405 V 405
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 589 HHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
HPN++ L+ Y G+ + V + KG L + + ++ I + +
Sbjct: 74 QHPNIITLKDVY--DDGKYVYVVTELMKG--GELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 649 NYLHVEENMIHGNLTSSNVL-LDEKTNP---RIADFGLSRLMXXXXXXXXXXXXXXLGYR 704
YLH + ++H +L SN+L +DE NP RI DFG ++ + +
Sbjct: 130 EYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA-NFV 187
Query: 705 APELSKLKNANTKTDVYSLGVIILELLTGKSP 736
APE+ + + + D++SLGV++ +LTG +P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLH--------ARGPETIV 632
E + K+H +++L AY K + LV M G + ++ + P I
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXX 692
A I GL +LH + N+I+ +L NVLLD+ N RI+D GL+ +
Sbjct: 294 YTAQ-------IVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQT 344
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP----GEPMNGMDLPQW 748
G+ APEL + + D ++LGV + E++ + P GE + +L Q
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 749 V 749
V
Sbjct: 405 V 405
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 539 TAEIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFE----AEAAAIGKIH---H 590
AEI G YGT YKA G VA+K +R G++ E A + ++ H
Sbjct: 9 VAEI-GVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 591 PNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
PN++ L + ++ LVF+ + + L ++L + P + T + R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGLPAETIKDLMRQFLR 123
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
GL++LH ++H +L N+L+ ++ADFGL+R+ L YRAP
Sbjct: 124 GLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRAP 180
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGK 734
E+ T D++S+G I E+ K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLH--------ARGPETIV 632
E + K+H +++L AY K + LV M G + ++ + P I
Sbjct: 235 EKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXX 692
A I GL +LH + N+I+ +L NVLLD+ N RI+D GL+ +
Sbjct: 294 YTAQ-------IVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQT 344
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP----GEPMNGMDLPQW 748
G+ APEL + + D ++LGV + E++ + P GE + +L Q
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 749 V 749
V
Sbjct: 405 V 405
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 543 MGKSTYGTAYKA-TLEDGSEVAVKRLRE---KTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
+G+ + Y+A L DG VA+K+++ K + + E + +++HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFL-HARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
++ E +V + G L+ + H + + ++ T + + L ++H +
Sbjct: 100 SFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH-SRRV 157
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
+H ++ +NV + ++ D GL R Y +PE N K
Sbjct: 158 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFK 216
Query: 718 TDVYSLGVIILELLTGKSP--GEPMN 741
+D++SLG ++ E+ +SP G+ MN
Sbjct: 217 SDIWSLGCLLYEMAALQSPFYGDKMN 242
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
AY K LV M G L ++ G A + A I GL LH E +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE-ARAVFYAAEICCGLEDLH-RERI 307
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
++ +L N+LLD+ + RI+D GL+ + +GY APE+ K +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 718 TDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
D ++LG ++ E++ G+SP + + V +VKE
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 539 TAEIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFE----AEAAAIGKIH---H 590
AEI G YGT YKA G VA+K +R G++ E A + ++ H
Sbjct: 9 VAEI-GVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 591 PNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
PN++ L + ++ LVF+ + + L ++L + P + T + R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGLPAETIKDLMRQFLR 123
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
GL++LH ++H +L N+L+ ++ADFGL+R+ L YRAP
Sbjct: 124 GLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRAP 180
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGK 734
E+ T D++S+G I E+ K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 539 TAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHP 591
T E +G + K + G + A K ++++ TK +++ E E + + +I HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 592 NLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
N++ L Y K + +L+ + + G L FL + T + I G+ YL
Sbjct: 75 NVITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLK---QILNGVYYL 130
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + + H +L N++L ++ P+ I DFGL+ + + APE
Sbjct: 131 HSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPE 187
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ + + D++S+GVI LL+G SP
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 539 TAEIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFE----AEAAAIGKIH---H 590
AEI G YGT YKA G VA+K +R G++ E A + ++ H
Sbjct: 9 VAEI-GVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 591 PNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
PN++ L + ++ LVF+ + + L ++L + P + T + R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGLPAETIKDLMRQFLR 123
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
GL++LH ++H +L N+L+ ++ADFGL+R+ L YRAP
Sbjct: 124 GLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYRAP 180
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGK 734
E+ T D++S+G I E+ K
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 30/222 (13%)
Query: 541 EIMGKSTYGTAYKATLED--------GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN 592
E +G+ T+ +K + +EV +K L + + F A+ + K+ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 593 L-LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
L L + G E +LV +F+ GSL ++L + + +N ++ +A +A +++L
Sbjct: 74 LVLNYGVCFCG--DENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 652 HVEENMIHGNLTSSNVLL----DEKT-NP---RIADFGLSRLMXXXXXXXXXXXXXXLGY 703
E +IHGN+ + N+LL D KT NP +++D G+S + +
Sbjct: 130 E-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-----ITVLPKDILQERIPW 183
Query: 704 RAPE-LSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744
PE + KN N TD +S G + E+ +G +P++ +D
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGD--KPLSALD 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K++H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 113 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 172 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREK----TTKG--QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ + +G ++E E E + +I HPN++ L + K + +L+ +
Sbjct: 51 GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILE 109
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL A + AT+ I G++YLH + + H +L N++L +K
Sbjct: 110 LVSGGELFDFL-AEKESLTEDEATQF--LKQILDGVHYLH-SKRIAHFDLKPENIMLLDK 165
Query: 673 T--NPRIA--DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
NPRI DFG++ + + APE+ + + D++S+GVI
Sbjct: 166 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 223
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 224 ILLSGASP 231
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 90 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 149 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 207
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 208 AFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 16/222 (7%)
Query: 525 DGPFLFTADDLLCATAEIMGKSTYGTAYKAT-LEDGSEVAVK-----RLREKTTKGQKEF 578
D LF LC E++GK + + E G + AVK + ++
Sbjct: 17 DDDVLFEDVYELC---EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 73
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIV-NWATR 637
+ EA+ + HP+++ L Y G +VF+FM L + R V + A
Sbjct: 74 KREASICHMLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP---RIADFGLSRLMXXXXXXXX 694
I L Y H + N+IH ++ NVLL K N ++ DFG++ +
Sbjct: 133 SHYMRQILEALRYCH-DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA 190
Query: 695 XXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ K + DV+ GVI+ LL+G P
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREK----TTKG--QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ + +G ++E E E + +I HPN++ L + K + +L+ +
Sbjct: 37 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL A + AT+ I G++YLH + + H +L N++L +K
Sbjct: 96 LVSGGELFDFL-AEKESLTEDEATQF--LKQILDGVHYLH-SKRIAHFDLKPENIMLLDK 151
Query: 673 T--NPRIA--DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
NPRI DFG++ + + APE+ + + D++S+GVI
Sbjct: 152 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 534 DLLCATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG------QKEFEAEAAAIG 586
D T E +G + K + G + A K ++++ TK +++ E E + +
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 587 KIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+I HPN++ L Y K + +L+ + + G L FL + E++ + I
Sbjct: 70 EIQHPNVITLHEVYEN-KTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLK-QILN 125
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPR----IADFGLSRLMXXXXXXXXXXXXXXLG 702
G+ YLH + + H +L N++L ++ P+ I DFGL+ +
Sbjct: 126 GVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE-- 182
Query: 703 YRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ + + D++S+GVI LL+G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 559 GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF-DFMPKG 617
G +VAVK + + + ++ E + H N++ + YL GE+L V +F+ G
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL--VGEELWVLMEFLQGG 127
Query: 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRI 677
+L + + +N ++ + + L YLH + +IH ++ S ++LL ++
Sbjct: 128 ALTDIVS----QVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGRVKL 182
Query: 678 ADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP- 736
+DFG + + APE+ T+ D++SLG++++E++ G+ P
Sbjct: 183 SDFGFCAQISKDVPKRKXLVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
Query: 737 --GEPMNGM 743
P+ M
Sbjct: 242 FSDSPVQAM 250
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 32/250 (12%)
Query: 518 GGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQK 576
G + ++F G F +++C ++GK ++G K E AVK + + + K +
Sbjct: 10 GRENLYFQGTFA-ERYNIVC----MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD 64
Query: 577 E--FEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNW 634
E + K+ HPN++ L L +V + G L + R + +
Sbjct: 65 TSTILREVELLKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123
Query: 635 ATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMXXXXX 691
A I + G+ Y+H + N++H +L N+LL+ K + +I DFGLS
Sbjct: 124 A---RIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 692 XXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN---------- 741
Y APE+ + + K DV+S GVI+ LL+G P N
Sbjct: 180 MKDRIGTAY--YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236
Query: 742 ---GMDLPQW 748
DLPQW
Sbjct: 237 GKYAFDLPQW 246
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 589 HHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
HPN++ L+ Y G+ + V + KG L + + ++ I + +
Sbjct: 74 QHPNIITLKDVY--DDGKYVYVVTELXKG--GELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 649 NYLHVEENMIHGNLTSSNVL-LDEKTNP---RIADFGLSRLMXXXXXXXXXXXXXXLGYR 704
YLH + ++H +L SN+L +DE NP RI DFG ++ + +
Sbjct: 130 EYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTA-NFV 187
Query: 705 APELSKLKNANTKTDVYSLGVIILELLTGKSP 736
APE+ + + + D++SLGV++ LTG +P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I D+GL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K++H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 158 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREK----TTKG--QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ + +G ++E E E + +I HPN++ L + K + +L+ +
Sbjct: 30 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILE 88
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL A + AT+ I G++YLH + + H +L N++L +K
Sbjct: 89 LVSGGELFDFL-AEKESLTEDEATQF--LKQILDGVHYLH-SKRIAHFDLKPENIMLLDK 144
Query: 673 T--NPRIA--DFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
NPRI DFG++ + + APE+ + + D++S+GVI
Sbjct: 145 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 202
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 203 ILLSGASP 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ADFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 32/250 (12%)
Query: 518 GGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQK 576
G + ++F G F +++C ++GK ++G K E AVK + + + K +
Sbjct: 10 GRENLYFQGTFA-ERYNIVC----MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD 64
Query: 577 E--FEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNW 634
E + K+ HPN++ L L +V + G L + R + +
Sbjct: 65 TSTILREVELLKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123
Query: 635 ATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMXXXXX 691
A I + G+ Y+H + N++H +L N+LL+ K + +I DFGLS
Sbjct: 124 A---RIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 692 XXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN---------- 741
Y APE+ + + K DV+S GVI+ LL+G P N
Sbjct: 180 MKDRIGTAY--YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236
Query: 742 ---GMDLPQW 748
DLPQW
Sbjct: 237 GKYAFDLPQW 246
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 98 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 157 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 98 CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 157 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 113 CIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 172 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 549 GTAYKATLEDGSEVAVKRLREKTT----------KGQKEFEAEAAAIGKI-HHPNLLALR 597
G K T+ GS KR K T K +++ E + + HPN++ L+
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 598 AYYLGPKGEKLLVFDFMPKGSL------ASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
Y K LV + M G L F R +++ I + + YL
Sbjct: 88 DVYDDGK-HVYLVTELMRGGELLDKILRQKFFSEREASFVLH---------TIGKTVEYL 137
Query: 652 HVEENMIHGNLTSSNVL-LDEKTNP---RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + ++H +L SN+L +DE NP RI DFG ++ + + APE
Sbjct: 138 H-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-NFVAPE 195
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ K + + D++SLG+++ +L G +P
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 16/202 (7%)
Query: 541 EIMGKSTYGTAY--KATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRA 598
E++G + + K L G A+K +++ E E A + KI H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIG-IARGLNYLHVEENM 657
Y LV + G L + RG T S+ I + + YLH E +
Sbjct: 74 IY-ESTTHYYLVMQLVSGGELFDRILERGVYT----EKDASLVIQQVLSAVKYLH-ENGI 127
Query: 658 IHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H +L N+L +E + I DFGLS++ GY APE+ K
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP---GYVAPEVLAQKPY 184
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ D +S+GVI LL G P
Sbjct: 185 SKAVDCWSIGVITYILLCGYPP 206
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ ++ ++E E E + + ++ H N++ L Y + + +L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL + ++ S I G+NYLH + + H +L N++L +K
Sbjct: 96 LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDK 151
Query: 673 TNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
P ++ DFGL+ + + APE+ + + D++S+GVI
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ ++ ++E E E + + ++ H N++ L Y + + +L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL + ++ S I G+NYLH ++ + H +L N++L +K
Sbjct: 96 LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDK 151
Query: 673 TNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
P ++ DFGL+ + + APE+ + + D++S+GVI
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 37/234 (15%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLA 595
A ++M + YG + +VAVK L+EK ++E +E + ++ H N++
Sbjct: 57 AFGKVMNATAYGISKTGV---SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVN 113
Query: 596 LRAYYLGP---KGEKLLVFDFMPKGSLASFLHARGPE--------------------TIV 632
L LG G L+F++ G L ++L ++ + ++
Sbjct: 114 L----LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXX 691
+ + A +A+G+ +L + + +H +L + NVL+ +I DFGL+R +M
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 692 XXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT---GKSPGEPMNG 742
+ + APE K+DV+S G+++ E+ + PG P++
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ ++ ++E E E + + ++ H N++ L Y + + +L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL + ++ S I G+NYLH ++ + H +L N++L +K
Sbjct: 96 LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDK 151
Query: 673 TNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
P ++ DFGL+ + + APE+ + + D++S+GVI
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 115 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 174 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 232
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 233 AFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 158 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 19/222 (8%)
Query: 526 GPFLFTADDLLCATAEIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEF-----E 579
GP A AEI G YGT YKA G VA+K +R G
Sbjct: 1 GPLGSMATSRYEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 580 AEAAAIGKIH---HPNLLALRAYYLGPKGEK----LLVFDFMPKGSLASFLHARGPETIV 632
E A + ++ HPN++ L + ++ LVF+ + + L ++L + P +
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLD-KAPPPGL 117
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXX 692
T + RGL++LH ++H +L N+L+ ++ADFGL+R+
Sbjct: 118 PAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQM 174
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGK 734
L YRAPE+ T D++S+G I E+ K
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ KE E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 123 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFGL++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIKVTDFGLAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 541 EIMGKSTYGTAYKATLED--------GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN 592
E +G+ T+ +K + +EV +K L + + F A+ + K+ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 593 LLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
L+ L E +LV +F+ GSL ++L + + +N ++ +A +A +++L
Sbjct: 74 LV-LNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLE 130
Query: 653 VEENMIHGNLTSSNVLL----DEKT-NP---RIADFGLSRLMXXXXXXXXXXXXXXLGYR 704
E +IHGN+ + N+LL D KT NP +++D G+S + +
Sbjct: 131 -ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-----ITVLPKDILQERIPWV 184
Query: 705 APE-LSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744
PE + KN N TD +S G + E+ +G +P++ +D
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGD--KPLSALD 223
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 105 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 164 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 223 AFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ ++ ++E E E + + ++ H N++ L Y + + +L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL + ++ S I G+NYLH ++ + H +L N++L +K
Sbjct: 96 LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDK 151
Query: 673 TNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
P ++ DFGL+ + + APE+ + + D++S+GVI
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLRE-KTTKGQKEFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E + + + +F EA I K +H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 113 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 172 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 549 GTAYKATLEDGSEVAVKRLREKTT----------KGQKEFEAEAAAIGKI-HHPNLLALR 597
G K T+ GS KR K T K +++ E + + HPN++ L+
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 598 AYYLGPKGEKLLVFDFMPKGSL------ASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
Y K LV + M G L F R +++ I + + YL
Sbjct: 88 DVYDDGK-HVYLVTELMRGGELLDKILRQKFFSEREASFVLH---------TIGKTVEYL 137
Query: 652 HVEENMIHGNLTSSNVL-LDEKTNP---RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE 707
H + ++H +L SN+L +DE NP RI DFG ++ + + APE
Sbjct: 138 H-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-NFVAPE 195
Query: 708 LSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ K + + D++SLG+++ +L G +P
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 559 GSEVAVKRLREKTTKG------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
G E A K ++++ ++ ++E E E + + ++ H N++ L Y + + +L+ +
Sbjct: 37 GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILE 95
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
+ G L FL + ++ S I G+NYLH ++ + H +L N++L +K
Sbjct: 96 LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDK 151
Query: 673 TNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIIL 728
P ++ DFGL+ + + APE+ + + D++S+GVI
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 729 ELLTGKSP 736
LL+G SP
Sbjct: 210 ILLSGASP 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK YG ++ + + G VAVK + K E E + H N+L A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 100
Query: 601 LGPK---GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
+ + + L+ + GSL +L +T+ + + I + IA GL +LH+E
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFG 156
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ + +G Y APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 708 L------SKLKNANTKTDVYSLGVIILEL 730
+ ++ + D+++ G+++ E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 116 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 175 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 234 AFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 61/333 (18%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 43 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 102
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXX 192
L L NL G+ LFNN+++ P + N NL L+LS+N
Sbjct: 103 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN------------------- 139
Query: 193 XXXXXXXXGSIPLSLTRLPSLSVL-ALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNL 251
+++ + +LS L +LQ N V + LA + L+ L++ N
Sbjct: 140 -------------TISDISALSGLTSLQQLNFGNQVTD-LKPLANLTT--LERLDISSNK 183
Query: 252 IAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVTF 308
++ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 184 VSD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----TL 234
Query: 309 TNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLS 368
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L+
Sbjct: 235 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 290
Query: 369 ENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
EN +ISP +++L NLT + +NN+S P
Sbjct: 291 ENQL-EDISP-ISNLKNLTYLTLYFNNISDISP 321
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 29 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 86
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 87 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 125
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ KE E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 123 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFGL++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGLAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 139 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 198 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 257 AFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA K+ HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ + LVFD + G L + AR + A I + Y H +
Sbjct: 72 DS-IQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCH-SNGI 126
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H NL N+LL K ++ADFGL+ + GY +PE+ K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ D+++ GVI+ LL G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 48 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 107
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNAL--IGAIPPSLANSTXXX 190
L L NL G+ LFNN+++ P + N NL L+LS+N + I A+
Sbjct: 108 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS---------- 153
Query: 191 XXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250
LT L LS G+ + LA + L+ L++ N
Sbjct: 154 ---------------GLTSLQQLSF---------GNQVTDLKPLANLTT--LERLDISSN 187
Query: 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVT 307
++ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 188 KVSD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----T 238
Query: 308 FTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDL 367
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L
Sbjct: 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294
Query: 368 SENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
+EN +ISP +++L NLT + +NN+S P
Sbjct: 295 NENQL-EDISP-ISNLKNLTYLTLYFNNISDISP 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 34 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 91
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 92 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 130
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGK-IHHPNLLAL 596
+GK + Y+ T D EV ++ K+ QKE + AI K + +P+++
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGP---ETIVNWATRMSIAIGIARGLNYLHV 653
++ +V + + SL LH R E + R +I +G+ YLH
Sbjct: 92 HGFFED-DDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 143
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+IH +L N+ L++ + +I DFGL+ + Y APE+ K
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP-NYIAPEVLCKKG 202
Query: 714 ANTKTDVYSLGVIILELLTGKSPGE 738
+ + D++SLG I+ LL GK P E
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 125 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG++R + + + PE
Sbjct: 184 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 243 AFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA K+ HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ + LVFD + G L + AR + A I + Y H +
Sbjct: 72 DS-IQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCH-SNGI 126
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H NL N+LL K ++ADFGL+ + GY +PE+ K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ D+++ GVI+ LL G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 61/333 (18%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 43 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 102
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXX 192
L L NL G+ LFNN+++ P + N NL L+LS+N
Sbjct: 103 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN------------------- 139
Query: 193 XXXXXXXXGSIPLSLTRLPSLSVL-ALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNL 251
+++ + +LS L +LQ N V + LA + L+ L++ N
Sbjct: 140 -------------TISDISALSGLTSLQQLNFGNQVTD-LKPLANLTT--LERLDISSNK 183
Query: 252 IAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVTF 308
++ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 184 VSD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----TL 234
Query: 309 TNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLS 368
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L+
Sbjct: 235 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 290
Query: 369 ENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
EN +ISP +++L NLT + +NN+S P
Sbjct: 291 ENQL-EDISP-ISNLKNLTYLTLYFNNISDISP 321
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 29 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 86
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 87 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 125
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICYFLYQ------ILRGLKYIH- 145
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 32/250 (12%)
Query: 518 GGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQK 576
G + ++F G F +++C ++GK ++G K E AVK + + + K +
Sbjct: 10 GRENLYFQGTFA-ERYNIVC----MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD 64
Query: 577 E--FEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNW 634
E + K+ HPN++ L L +V + G L + R + +
Sbjct: 65 TSTILREVELLKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123
Query: 635 ATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMXXXXX 691
A I + G+ Y+H + N++H +L N+LL+ K + +I DFGLS
Sbjct: 124 A---RIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 692 XXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN---------- 741
Y APE+ + + K DV+S GVI+ LL+G P N
Sbjct: 180 MKDRIGTAY--YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236
Query: 742 ---GMDLPQW 748
DLPQW
Sbjct: 237 GKYAFDLPQW 246
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA K+ HPN++ L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ + LVFD + G L + AR + A I + Y H +
Sbjct: 71 DS-IQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCH-SNGI 125
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H NL N+LL K ++ADFGL+ + GY +PE+ K
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ D+++ GVI+ LL G P
Sbjct: 184 SKPVDIWACGVILYILLVGYPP 205
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK YG ++ + + G VAVK + K E E + H N+L A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 601 LGPK---GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
+ + + L+ + GSL +L +T+ + + I + IA GL +LH+E
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFG 127
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ + +G Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 708 L------SKLKNANTKTDVYSLGVIILEL 730
+ ++ + D+++ G+++ E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGK-IHHPNLLAL 596
+GK + Y+ T D EV ++ K+ QKE + AI K + +P+++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGP---ETIVNWATRMSIAIGIARGLNYLHV 653
++ +V + + SL LH R E + R +I +G+ YLH
Sbjct: 108 HGFFED-DDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 159
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+IH +L N+ L++ + +I DFGL+ + Y APE+ K
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP-NYIAPEVLCKKG 218
Query: 714 ANTKTDVYSLGVIILELLTGKSPGE 738
+ + D++SLG I+ LL GK P E
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 76 VGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLS---LHDNLLAGPVP 132
V GIK + G L I+ L L KL +++N +A P
Sbjct: 47 VTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP 106
Query: 133 WSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNAL--IGAIPPSLANSTXXX 190
L L NL G+ LFNN+++ P + N NL L+LS+N + I A+
Sbjct: 107 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS---------- 152
Query: 191 XXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250
LT L LS G+ + LA + L+ L++ N
Sbjct: 153 ---------------GLTSLQQLSF---------GNQVTDLKPLANLTT--LERLDISSN 186
Query: 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA---IGGSFPVT 307
++ I V L KL L+ + ++N+I P LG L+ L +L L+ N IG T
Sbjct: 187 KVSD-ISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-----T 237
Query: 308 FTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDL 367
++T+L L+L NN++ N P L L LT L L NQ P + ++ + L+L
Sbjct: 238 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 293
Query: 368 SENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
+EN +ISP +++L NLT + +NN+S P
Sbjct: 294 NENQL-EDISP-ISNLKNLTYLTLYFNNISDISP 325
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 309 TNITSLVS-------LNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISG 361
TN+T VS L+ +RLG K +G+E L NLT +N NNQ P + N++
Sbjct: 33 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 90
Query: 362 INQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL 403
+ + L N+ +I+P LA+L NLT + +NN + PL
Sbjct: 91 LVDI-LMNNNQIADITP-LANLTNLTGLTL-FNNQITDIDPL 129
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXX 696
+S + +ARG+ +L IH +L + N+LL E +I DFGL+R +
Sbjct: 202 ISYSFQVARGMEFLS-SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 697 XXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
L + APE K +TK+DV+S GV++ E+ + G P G+ + + S ++E
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--LGGSPYPGVQMDEDFCSRLRE 317
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGK-IHHPNLLAL 596
+GK + Y+ T D EV ++ K+ QKE + AI K + +P+++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGP---ETIVNWATRMSIAIGIARGLNYLHV 653
++ +V + + SL LH R E + R +I +G+ YLH
Sbjct: 108 HGFFED-DDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 159
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+IH +L N+ L++ + +I DFGL+ + Y APE+ K
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP-NYIAPEVLCKKG 218
Query: 714 ANTKTDVYSLGVIILELLTGKSPGE 738
+ + D++SLG I+ LL GK P E
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKT---TKGQKEFEAEAAAIGK-IHHPNLLAL 596
+GK + Y+ T D EV ++ K+ QKE + AI K + +P+++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGP---ETIVNWATRMSIAIGIARGLNYLHV 653
++ +V + + SL LH R E + R +I +G+ YLH
Sbjct: 108 HGFFED-DDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLH- 159
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+IH +L N+ L++ + +I DFGL+ + Y APE+ K
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP-NYIAPEVLCKKG 218
Query: 714 ANTKTDVYSLGVIILELLTGKSPGE 738
+ + D++SLG I+ LL GK P E
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VPGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXL 701
I RGL Y+H N++H +L SN+LL+ ++ +I DFGL+R+
Sbjct: 135 ILRGLKYIH-SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 702 GYRAPELSKLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
YRAPE+ TK+ D++S+G I+ E+L+ + PG+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 209 RLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQE 268
RL L +L L N L ++P G+ K+ + ++ D+ L A I V +L L E
Sbjct: 59 RLTKLRLLYLNDNKLQ-TLPA--GIFKELKNLETLWVT-DNKLQALPIGV-FDQLVNLAE 113
Query: 269 ISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKI 328
+ L N++ P L+KL L L YN + F +TSL L L NN+L ++
Sbjct: 114 LRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL-KRV 172
Query: 329 PEG-LERLQNLTVLNLKNNQFKGHIPE-TIGNISGINQLDLSEN 370
PEG ++L L L L NNQ K +PE ++ + L L EN
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 72/277 (25%)
Query: 73 DSGVGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHA-LRKLSLHDNLLAGPV 131
D GV +C+ + C ++ AI S + A +KL L N L+
Sbjct: 8 DGGVCSCNNNKNSVDCSSKKLTAIP--------------SNIPADTKKLDLQSNKLSSLP 53
Query: 132 PWSLGFLPNLRGVYLFNNRLSGSIPPSI-GNCPNLQTLDLSNNALIGAIPPSLANSTXXX 190
+ L LR +YL +N+L ++P I NL+TL +++N L A+P +
Sbjct: 54 SKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKL-QALPIGV------- 104
Query: 191 XXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250
+L +L+ L L N L P + L +L +L+L +N
Sbjct: 105 ----------------FDQLVNLAELRLDRNQLKSLPPRVFDSLT-----KLTYLSLGYN 143
Query: 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTN 310
+ KL L+E+ L +N++ +P+ F
Sbjct: 144 ELQSLPKGVFDKLTSLKELRLYNNQL-KRVPEG-----------------------AFDK 179
Query: 311 ITSLVSLNLENNRLGNKIPEG-LERLQNLTVLNLKNN 346
+T L +L L+NN+L ++PEG + L+ L +L L+ N
Sbjct: 180 LTELKTLKLDNNQL-KRVPEGAFDSLEKLKMLQLQEN 215
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 291 QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKNNQFK 349
+KLDL N + F +T L L L +N+L +P G+ + L+NL L + +N+ +
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQ 98
Query: 350 GHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
+ + +L L N SL LT ++ YN L S+P
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLP 149
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 141
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 91
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 143
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 541 EIMGKSTYGTAY---KATLED-GSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPN 592
+++G YG + K + D G A+K L++ T K + E + I
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 593 LLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIG-IARGLNYL 651
L Y + + L+ D++ G L + L R T + I +G I L +L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT----EHEVQIYVGEIVLALEHL 175
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 711
H + +I+ ++ N+LLD + + DFGLS+ + Y AP++ +
Sbjct: 176 H-KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 712 KNA--NTKTDVYSLGVIILELLTGKSP 736
++ + D +SLGV++ ELLTG SP
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK YG ++ + + G VAVK + K E E + H N+L A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 601 LGPK---GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
+ + + L+ + GSL +L +T+ + + I + IA GL +LH+E
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFG 127
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ + +G Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 708 L------SKLKNANTKTDVYSLGVIILEL 730
+ ++ + D+++ G+++ E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 109
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 110 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 161
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVK---RLREKTTKGQKEFEAEAAAIGKIHHPNLLAL 596
E +G+ ++G AT + +VA+K R K + E E + + + HP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
P + ++V ++ G L ++ + T + R I A + Y H
Sbjct: 75 YDVITTP-TDIVMVIEY-AGGELFDYIVEKKRMT-EDEGRRFFQQIICA--IEYCH-RHK 128
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK-NAN 715
++H +L N+LLD+ N +IADFGLS +M Y APE+ K A
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSP--NYAAPEVINGKLYAG 186
Query: 716 TKTDVYSLGVIILELLTGKSP 736
+ DV+S G+++ +L G+ P
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLP 207
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 139
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 97
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 98 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 149
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 141
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 541 EIMGKSTYGTAYKATLEDGSEV--AVKRLREKT---TKGQKEFEAEAAAIGK-IHHPNLL 594
+++GK ++G A EV AVK L++K K +K +E + K + HP L+
Sbjct: 44 KVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102
Query: 595 ALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
L ++ +KL V D++ G L F H + + R A IA L YLH
Sbjct: 103 GL--HFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARF-YAAEIASALGYLH- 156
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
N+++ +L N+LLD + + + DFGL + Y APE+ +
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 714 ANTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745
+ D + LG ++ E+L G P N ++
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 52 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 109
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 110 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKE----FEAEAAAIGKI-HHPNLLAL 596
++G+ +Y L+ + R+ +K E + E + +HP L+ L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + V +++ G L H + + R A I+ LNYLH E
Sbjct: 119 HSCF-QTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLH-ERG 173
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+I+ +L NVLLD + + ++ D+G+ + Y APE+ + ++
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 717 KTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
D ++LGV++ E++ G+SP + + D P
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 122
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 139
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 146
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 95
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 96 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 147
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 86
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 87 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 138
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 145
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWTLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I DF L+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 145
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 56 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 113
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 114 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 146
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 122
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXL 701
I RGL Y+H N++H +L SN+LL+ + +I DFGL+R+
Sbjct: 135 ILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 702 GYRAPELSKLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
YRAPE+ TK+ D++S+G I+ E+L+ + PG+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 50 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 107
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 108 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA + HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ +G LVFD + G L + AR + A I +N+ H+ +
Sbjct: 70 DS-ISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNHCHLN-GI 124
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H +L N+LL K+ ++ADFGL+ + GY +PE+ +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
D+++ GVI+ LL G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 56 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 113
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 114 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L Y +V ++
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-YSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 122
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 16 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 73 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 127
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 122
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKATLEDGS-EVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + + E A K + K + + ++ E EA + HPN++ L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ +G LVFD + G L + AR + A I +N++H + ++
Sbjct: 97 DS-ISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIHQILESVNHIH-QHDI 151
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H +L N+LL K ++ADFGL+ + GY +PE+ +
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
D+++ GVI+ LL G P
Sbjct: 211 GKPVDIWACGVILYILLVGYPP 232
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA K+ HPN++ L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ + LVFD + G L + AR + A I + Y H +
Sbjct: 95 DS-IQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCH-SNGI 149
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H NL N+LL K ++ADFGL+ + GY +PE+ K
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ D+++ GVI+ LL G P
Sbjct: 208 SKPVDIWACGVILYILLVGYPP 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 141
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXL 701
I RGL Y+H N++H +L SN+LL+ + +I DFGL+R+
Sbjct: 137 ILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 702 GYRAPELSKLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
YRAPE+ TK+ D++S+G I+ E+L+ + PG+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 68 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 122
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I FGL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L Y +V ++
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-YSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 541 EIMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFE---AEAAAIGKIHHPNL 593
+++GK T+G KAT G A+K LR++ + E E+ + HP L
Sbjct: 14 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 594 LALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
AL+ Y V ++ G L F H R A I L YLH
Sbjct: 71 TALK-YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLH- 125
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++++ ++ N++LD+ + +I DFGL + Y APE+ + +
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
D + LGV++ E++ G+ P
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L Y +V ++
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-YSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 25/222 (11%)
Query: 532 ADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKG-QKEFEAEAAAIGKIHH 590
+DL +G+ TYG YKA +DG + L++ G E A + ++ H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 591 PNLLALRAYYLGPKGEKL-LVFDF----------MPKGSLASFLHARGPETIVNWATRMS 639
PN+++L+ +L K+ L+FD+ + S A+ + P +V S
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK-----S 132
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLL----DEKTNPRIADFGLSRLMXX--XXXXX 693
+ I G++YLH ++H +L +N+L+ E+ +IAD G +RL
Sbjct: 133 LLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 694 XXXXXXXLGYRAPELSKLKNANTKT-DVYSLGVIILELLTGK 734
YRAPEL TK D++++G I ELLT +
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 62 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 119
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 120 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 70 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 127
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 128 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 145
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I D GL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 72 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 130 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 575 QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL----HARGPET 630
+ E AEA + ++ +P ++ R + +LV + G L +L H +
Sbjct: 72 KDELLAEANVMQQLDNPYIV--RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 631 IVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX 690
I + ++ G+ YL E N +H +L + NVLL + +I+DFGLS+ +
Sbjct: 130 I-------ELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 691 XXXXXXXXXX--LGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ + APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 570 KTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPE 629
K T +K E + ++ HPN++ L+ + P E LV + + G L + +G
Sbjct: 87 KKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-EISLVLELVTGGELFDRIVEKGYY 145
Query: 630 TIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP---RIADFGLSRLM 686
+ + A + I + YLH E ++H +L N+L +IADFGLS+++
Sbjct: 146 SERDAADAVK---QILEAVAYLH-ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
Query: 687 XXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
GY APE+ + + D++S+G+I LL G P
Sbjct: 202 EHQVLMKTVCGTP--GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXL 701
I RGL Y+H N++H +L SN+LL+ + +I DFGL+R+
Sbjct: 153 ILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 702 GYRAPELSKLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
YRAPE+ TK+ D++S+G I+ E+L+ + PG+
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 543 MGKSTYG---TAYKATLEDGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+G+ YG +AY + VA+K++ E T Q+ E + + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 87
Query: 598 AYYLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYL 651
P E++ +V D M + L L + + I + + I RGL Y+
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYI 140
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELS 709
H N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 141 H-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 710 KLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 541 EIMGKSTYG---TAYKATLEDGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLA 595
+ +G+ YG +AY + + VA+K++ E T Q+ E + + H N++
Sbjct: 49 QYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIG 105
Query: 596 ----LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
LRA L + +V D M + L L ++ ++ I RGL Y+
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQ----LSNDHICYFLYQILRGLKYI 160
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELS 709
H N++H +L SN+L++ + +I DFGL+R+ YRAPE+
Sbjct: 161 H-SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 710 KLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX--L 701
++ G+ YL E N +H +L + NVLL + +I+DFGLS+ + +
Sbjct: 478 VSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 543 MGKSTYGTAYKATLE----DGS--EVAVKRLREKTTKGQK-EFEAEAAAIGKIHHPNLLA 595
+G +G Y+ + D S +VAVK L E ++ + +F EA I K +H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM----SIAIGIARGLNYL 651
L + ++ + M G L SFL P + M +A IA G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIA---DFGLSR-LMXXXXXXXXXXXXXXLGYRAPE 707
E + IH ++ + N LL R+A DFG+++ + + + PE
Sbjct: 158 E-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 708 LSKLKNANTKTDVYSLGVIILELLT 732
+KTD +S GV++ E+ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLR--EKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ YG A + VA+K++ E T Q+ E + + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDI 93
Query: 600 YLGPKGEKL----LVFDFMPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHV 653
P E++ +V D M + L L + + I + + I RGL Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH- 145
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXLGYRAPELSKL 711
N++H +L SN+LL+ + +I DFGL+R+ YRAPE+
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 712 KNANTKT-DVYSLGVIILELLTGKS--PGE 738
TK+ D++S+G I+ E+L+ + PG+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I D GL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX--L 701
++ G+ YL E N +H +L + NVLL + +I+DFGLS+ + +
Sbjct: 479 VSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745
+ APE ++K+DV+S GV++ E + G+ P M G ++
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 9/199 (4%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G ++ T G+ A K + ++ E + + HP L+ L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
+ E +++++FM G L F ++ + + +GL ++H E N +H
Sbjct: 223 FED-DNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVH 278
Query: 660 GNLTSSNVLLDEKTNP--RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
+L N++ K + ++ DFGL+ + APE+++ K
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA--APEVAEGKPVGYY 336
Query: 718 TDVYSLGVIILELLTGKSP 736
TD++S+GV+ LL+G SP
Sbjct: 337 TDMWSVGVLSYILLSGLSP 355
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 12/202 (5%)
Query: 541 EIMGKSTYGTAYKA-TLEDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA + HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ +G LVFD + G L + AR + A I +N+ H+ +
Sbjct: 70 DS-ISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNHCHLN-GI 124
Query: 658 IHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+H +L N+LL K+ ++ADFGL+ + GY +PE+ +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
D+++ GVI+ LL G P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 123 APGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 19/223 (8%)
Query: 537 CATAEIMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLA 595
+ EI+G +G +K G ++A K ++ + K ++E + E + + ++ H NL+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAI--GIARGLNYLHV 653
L + K + +LV +++ G L R + N +I I G+ ++H
Sbjct: 151 LYDAF-ESKNDIVLVMEYVDGGELFD----RIIDESYNLTELDTILFMKQICEGIRHMH- 204
Query: 654 EENMIHGNLTSSNVLL--DEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 711
+ ++H +L N+L + +I DFGL+R + APE+
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE--FLAPEVVNY 262
Query: 712 KNANTKTDVYSLGVIILELLTGKSP------GEPMNGMDLPQW 748
+ TD++S+GVI LL+G SP E +N + +W
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 9/199 (4%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
E +G +G ++ T G+ A K + ++ E + + HP L+ L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
+ E +++++FM G L F ++ + + +GL ++H E N +H
Sbjct: 117 FED-DNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVH 172
Query: 660 GNLTSSNVLLDEKTNP--RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
+L N++ K + ++ DFGL+ + APE+++ K
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA--APEVAEGKPVGYY 230
Query: 718 TDVYSLGVIILELLTGKSP 736
TD++S+GV+ LL+G SP
Sbjct: 231 TDMWSVGVLSYILLSGLSP 249
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 123 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I RGL Y+H ++IH +L SN+ ++E +I D GL+R Y
Sbjct: 134 ILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRWY 188
Query: 704 RAPELS-KLKNANTKTDVYSLGVIILELLTGKS--PG 737
RAPE+ + N D++S+G I+ ELLTG++ PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAA-----IGKIHHPNLLAL 596
+G YG+ A G +VA+K+L + Q E A+ A + + H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 597 RAYYLGPKGEKLLVFDF---MP--KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYL 651
+ P +DF MP + L + + E + + + + +GL Y+
Sbjct: 89 LDVF-TPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYI 142
Query: 652 HVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSK 710
H ++H +L N+ ++E +I DFGL+R YRAPE +
Sbjct: 143 H-SAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAPEVILS 197
Query: 711 LKNANTKTDVYSLGVIILELLTGKS 735
+ N D++S+G I+ E+LTGK+
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKE----FEAEAAAIGKI-HHPNLLAL 596
++G+ +Y L+ + ++ +K E + E + +HP L+ L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + V +++ G L H + + R A I+ LNYLH E
Sbjct: 76 HSCF-QTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLH-ERG 130
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+I+ +L NVLLD + + ++ D+G+ + Y APE+ + ++
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 717 KTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
D ++LGV++ E++ G+SP + + D P
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 549 GTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEK 607
G + A D + VA+K++ + K E I ++ H N++ + LGP G +
Sbjct: 25 GLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI-LGPSGSQ 83
Query: 608 L--------------LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV 653
L +V ++M + LA+ L +GP ++ R+ + RGL Y+H
Sbjct: 84 LTDDVGSLTELNSVYIVQEYM-ETDLANVLE-QGP--LLEEHARL-FMYQLLRGLKYIH- 137
Query: 654 EENMIHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG--YRAPELSK 710
N++H +L +N+ ++ E +I DFGL+R+M + YR+P L
Sbjct: 138 SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL 197
Query: 711 LKNANTKT-DVYSLGVIILELLTGKS 735
N TK D+++ G I E+LTGK+
Sbjct: 198 SPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKE----FEAEAAAIGKI-HHPNLLAL 596
++G+ +Y L+ + ++ +K E + E + +HP L+ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 597 RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN 656
+ + + V +++ G L H + + R A I+ LNYLH E
Sbjct: 72 HSCF-QTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALNYLH-ERG 126
Query: 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT 716
+I+ +L NVLLD + + ++ D+G+ + Y APE+ + ++
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 717 KTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
D ++LGV++ E++ G+SP + + D P
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXX--XXXXXXXL 701
I RGL Y+H N++H +L SN+LL+ + +I DFGL+R+
Sbjct: 133 ILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 702 GYRAPELSKLKNANTKT-DVYSLGVIILELLTGKS--PGE 738
YRAPE+ TK+ D++S+G I+ E+L+ + PG+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 589 HHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
+HP L+ L + + + V +++ G L H + + R A I+ L
Sbjct: 79 NHPFLVGLHSCF-QTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLAL 134
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL 708
NYLH E +I+ +L NVLLD + + ++ D+G+ + Y APE+
Sbjct: 135 NYLH-ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEI 192
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ ++ D ++LGV++ E++ G+SP + + D P
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 123 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 613 FMPKGSLASFLHARGPETI----VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668
F+ + SL+ PE + + + + +A+G+ +L IH +L + N+L
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNIL 230
Query: 669 LDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVII 727
L EK +I DFGL+R + L + APE + ++DV+S GV++
Sbjct: 231 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 290
Query: 728 LELLT-GKSP 736
E+ + G SP
Sbjct: 291 WEIFSLGASP 300
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAA-----IGKIHHPNLL-- 594
+G YG+ A G +VA+K+L + Q E A+ A + + H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL---SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 595 --------ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIAR 646
+LR +Y + LV FM + L + E + + + + +
Sbjct: 107 LDVFTPASSLRNFY-----DFYLVMPFM-QTDLQKIMGMEFSEEKIQY-----LVYQMLK 155
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
GL Y+H ++H +L N+ ++E +I DFGL+R YRAP
Sbjct: 156 GLKYIH-SAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWYRAP 210
Query: 707 E-LSKLKNANTKTDVYSLGVIILELLTGKS 735
E + + N D++S+G I+ E+LTGK+
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 613 FMPKGSLASFLHARGPETI----VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668
F+ + SL+ PE + + + + +A+G+ +L IH +L + N+L
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNIL 223
Query: 669 LDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVII 727
L EK +I DFGL+R + L + APE + ++DV+S GV++
Sbjct: 224 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 283
Query: 728 LELLT-GKSP 736
E+ + G SP
Sbjct: 284 WEIFSLGASP 293
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 613 FMPKGSLASFLHARGPETI----VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668
F+ + SL+ PE + + + + +A+G+ +L IH +L + N+L
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNIL 232
Query: 669 LDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVII 727
L EK +I DFGL+R + L + APE + ++DV+S GV++
Sbjct: 233 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 292
Query: 728 LELLT-GKSP 736
E+ + G SP
Sbjct: 293 WEIFSLGASP 302
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 25 AAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 84
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 85 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 143
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 144 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 199
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 200 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 734 KSP 736
P
Sbjct: 256 YPP 258
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 613 FMPKGSLASFLHARGPETI----VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668
F+ + SL+ PE + + + + +A+G+ +L IH +L + N+L
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNIL 225
Query: 669 LDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVII 727
L EK +I DFGL+R + L + APE + ++DV+S GV++
Sbjct: 226 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 285
Query: 728 LELLT-GKSP 736
E+ + G SP
Sbjct: 286 WEIFSLGASP 295
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 124 APGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 124 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK +G ++ G EVAVK + + EAE + H N+L A
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 67
Query: 601 LGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
G + LV D+ GSL +L+ V + +A+ A GL +LH+E
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ +G Y APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 708 L------SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ K + + D+Y++G++ E+ S G LP
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKE-FEAEAAAIGKIHHPNLLALRAY 599
+G +YG K + DG + K L + T+ +K+ +E + ++ HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 600 YLGPKGEKL-LVFDFMPKGSLASFLHARGPE-TIVNWATRMSIAIGIARGLNYLHVEEN- 656
+ L +V ++ G LAS + E ++ + + + L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 657 ---MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++H +L +NV LD K N ++ DFGL+R++ Y +PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY-YMSPEQMNRMS 192
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
N K+D++SLG ++ EL P
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPP 215
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK +G ++ G EVAVK + + EAE + H N+L A
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 92
Query: 601 LGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
G + LV D+ GSL +L+ V + +A+ A GL +LH+E
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ +G Y APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 708 L------SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ K + + D+Y++G++ E+ S G LP
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 253
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 542 IMGKSTYGTAYKATLED-GSEVAVKRLREKTTKG--QKEFEAEAAAIGKIHHPNLLALRA 598
++G+ +YG K +D G VA+K+ E +K E + ++ H NL+ L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 599 YYLGPKGEKLLVFDFMPKGSLASF-LHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
K LVF+F+ L L G +++ I G+ + H N+
Sbjct: 92 V-CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCH-SHNI 145
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL--SKLKNAN 715
IH ++ N+L+ + ++ DFG +R + YRAPEL +K
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW-YRAPELLVGDVKYGK 204
Query: 716 TKTDVYSLGVIILELLTGKS--PGE 738
DV+++G ++ E+ G+ PG+
Sbjct: 205 A-VDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKE-FEAEAAAIGKIHHPNLLALRAY 599
+G +YG K + DG + K L + T+ +K+ +E + ++ HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 600 YLGPKGEKL-LVFDFMPKGSLASFLHARGPE-TIVNWATRMSIAIGIARGLNYLHVEEN- 656
+ L +V ++ G LAS + E ++ + + + L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 657 ---MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++H +L +NV LD K N ++ DFGL+R++ Y +PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY-YMSPEQMNRMS 192
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
N K+D++SLG ++ EL P
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPP 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEV-AVKRLREKTTKGQKEFEAEAAAIGKI----HHPNLLA 595
+++GK ++G + A + ++ A+K L++ + E + HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
+ + K V +++ G L + + + + A I GL +LH +
Sbjct: 83 MFCTF-QTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLH-SK 137
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
+++ +L N+LLD+ + +IADFG+ + Y APE+ + N
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASI 752
D +S GV++ E+L G+S P +G D + SI
Sbjct: 197 HSVDWWSFGVLLYEMLIGQS---PFHGQDEEELFHSI 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK +G ++ G EVAVK + + EAE + H N+L A
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 72
Query: 601 LGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
G + LV D+ GSL +L+ V + +A+ A GL +LH+E
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ +G Y APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 708 L------SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ K + + D+Y++G++ E+ S G LP
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 233
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK +G ++ G EVAVK + + EAE + H N+L A
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 69
Query: 601 LGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
G + LV D+ GSL +L+ V + +A+ A GL +LH+E
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ +G Y APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 708 L------SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ K + + D+Y++G++ E+ S G LP
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 541 EIMGKSTYGTAYKATLEDGSEV-AVKRLREKTTKGQKEFEAEAAAIGKI----HHPNLLA 595
+++GK ++G + A + ++ A+K L++ + E + HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE 655
+ + K V +++ G L + + + + A I GL +LH +
Sbjct: 84 MFCTF-QTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLH-SK 138
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN 715
+++ +L N+LLD+ + +IADFG+ + Y APE+ + N
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 716 TKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASI 752
D +S GV++ E+L G+S P +G D + SI
Sbjct: 198 HSVDWWSFGVLLYEMLIGQS---PFHGQDEEELFHSI 231
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK +G ++ G EVAVK + + EAE + H N+L A
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 66
Query: 601 LGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
G + LV D+ GSL +L+ V + +A+ A GL +LH+E
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ +G Y APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 708 L------SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ K + + D+Y++G++ E+ S G LP
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
E +GK +G ++ G EVAVK + + EAE + H N+L A
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 105
Query: 601 LGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE--- 654
G + LV D+ GSL +L+ V + +A+ A GL +LH+E
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 655 ----ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE 707
+ H +L S N+L+ + IAD GL+ +G Y APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 708 L------SKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
+ K + + D+Y++G++ E+ S G LP
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSI 640
E + + ++HHP L+ L + K E +L+ +F+ G L F + ++ A ++
Sbjct: 98 EISIMNQLHHPKLINLHDAFED-KYEMVLILEFLSGGEL--FDRIAAEDYKMSEAEVINY 154
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEK--TNPRIADFGLSRLMXXXXXXXXXXXX 698
GL ++H E +++H ++ N++ + K ++ +I DFGL+ +
Sbjct: 155 MRQACEGLKHMH-EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 699 XXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEW 757
APE+ + TD++++GV+ LL+G S P G D + + ++ + +W
Sbjct: 214 AEFA--APEIVDREPVGFYTDMWAIGVLGYVLLSGLS---PFAGEDDLETLQNVKRCDW 267
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G
Sbjct: 5 AAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 513 SGGEMGGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKA-TLEDGSEVAVKRLREKT 571
SG ++G + ++F F ++ T++ +G+ + + + G E A K L+ K
Sbjct: 9 SGVDLGTENLYFQSMENF--NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLK-KR 65
Query: 572 TKGQK---EFEAEAAAIGKIHH-PNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARG 627
+GQ E E A + P ++ L Y E +L+ ++ G + S
Sbjct: 66 RRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TSEIILILEYAAGGEIFSLCLPEL 124
Query: 628 PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGLSR 684
E +V+ + + I G+ YLH + N++H +L N+LL + +I DFG+SR
Sbjct: 125 AE-MVSENDVIRLIKQILEGVYYLH-QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 685 LMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ Y APE+ T TD++++G+I LLT SP
Sbjct: 183 KIGHACELREIMGTPE--YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 543 MGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKE-FEAEAAAIGKIHHPNLLALRAY 599
+G +YG K + DG + K L + T+ +K+ +E + ++ HPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 600 YLGPKGEKL-LVFDFMPKGSLASFLHARGPE-TIVNWATRMSIAIGIARGLNYLHVEEN- 656
+ L +V ++ G LAS + E ++ + + + L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 657 ---MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
++H +L +NV LD K N ++ DFGL+R++ Y +PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY-YMSPEQMNRMS 192
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
N K+D++SLG ++ EL P
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPP 215
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 87/204 (42%), Gaps = 12/204 (5%)
Query: 201 GSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSL 260
GSI LPSLS L L N LS S ++ L N L+ L+L N G I +S
Sbjct: 335 GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS---LRHLDLSFN---GAIIMSA 388
Query: 261 GKLGL--LQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVS 316
+GL LQ + H+ K V L L KL LD+SY F F +TSL +
Sbjct: 389 NFMGLEELQHLDFQHSTLKRVTEFSAFLS-LEKLLYLDISYTNTKIDFDGIFLGLTSLNT 447
Query: 317 LNLENNRL-GNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGE 375
L + N N + NLT L+L Q + + + L++S N+
Sbjct: 448 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 507
Query: 376 ISPSLASLANLTSFNVSYNNLSGS 399
S L +L++ + S+N + S
Sbjct: 508 DSSHYNQLYSLSTLDCSFNRIETS 531
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 250 NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI-GGSFPVTF 308
N I P S L L+ + K+ +G+L L+KL++++N I P F
Sbjct: 85 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYF 144
Query: 309 TNITSLVSLNLENNRLGNKIPEGLERLQ 336
+N+T+LV ++L N + L+ L+
Sbjct: 145 SNLTNLVHVDLSYNYIQTITVNDLQFLR 172
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 277 VGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL---ENNRLGNKIPEGLE 333
+ +PD++ S + +DLS+N + +F+N + L L+L E + +K GL
Sbjct: 18 LSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLH 75
Query: 334 RLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSY 393
L NL L N + P + ++ + L E S + L L NV++
Sbjct: 76 HLSNLI---LTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAH 132
Query: 394 NNLSGSVPP 402
N + P
Sbjct: 133 NFIHSCKLP 141
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 542 IMGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEA-------AAIGKIHHPNL 593
I+G+ +G Y D G A+K L +K K K+ E A + + P +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFI 254
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ + + P +KL + D M G L L G + + A A I GL ++H
Sbjct: 255 VCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMH 309
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 711
+++ +L +N+LLDE + RI+D GL+ GY APE L K
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 712 KNANTKTDVYSLGVIILELLTGKSP 736
++ D +SLG ++ +LL G SP
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 542 IMGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEA-------AAIGKIHHPNL 593
I+G+ +G Y D G A+K L +K K K+ E A + + P +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFI 254
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ + + P +KL + D M G L L G + + A A I GL ++H
Sbjct: 255 VCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMH 309
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 711
+++ +L +N+LLDE + RI+D GL+ GY APE L K
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 712 KNANTKTDVYSLGVIILELLTGKSP 736
++ D +SLG ++ +LL G SP
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 542 IMGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEA-------AAIGKIHHPNL 593
I+G+ +G Y D G A+K L +K K K+ E A + + P +
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFI 253
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ + + P +KL + D M G L L G + + A A I GL ++H
Sbjct: 254 VCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMH 308
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 711
+++ +L +N+LLDE + RI+D GL+ GY APE L K
Sbjct: 309 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 712 KNANTKTDVYSLGVIILELLTGKSP 736
++ D +SLG ++ +LL G SP
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 542 IMGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEA-------AAIGKIHHPNL 593
I+G+ +G Y D G A+K L +K K K+ E A + + P +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFI 254
Query: 594 LALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ + + P +KL + D M G L L G + + A A I GL ++H
Sbjct: 255 VCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMH 309
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKL 711
+++ +L +N+LLDE + RI+D GL+ GY APE L K
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 712 KNANTKTDVYSLGVIILELLTGKSP 736
++ D +SLG ++ +LL G SP
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G +
Sbjct: 5 AAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 124 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 87/204 (42%), Gaps = 12/204 (5%)
Query: 201 GSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSL 260
GSI LPSLS L L N LS S ++ L N L+ L+L N G I +S
Sbjct: 340 GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS---LRHLDLSFN---GAIIMSA 393
Query: 261 GKLGL--LQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVS 316
+GL LQ + H+ K V L L KL LD+SY F F +TSL +
Sbjct: 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLS-LEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452
Query: 317 LNLENNRL-GNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGE 375
L + N N + NLT L+L Q + + + L++S N+
Sbjct: 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512
Query: 376 ISPSLASLANLTSFNVSYNNLSGS 399
S L +L++ + S+N + S
Sbjct: 513 DSSHYNQLYSLSTLDCSFNRIETS 536
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 16/188 (8%)
Query: 153 GSIPPSIGNCPNL--QTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRL 210
GS+ P I PN+ Q +D + + IP S N PL + +
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFN------------PLKILKS 49
Query: 211 PSLSVLA-LQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEI 269
S S + LQ +LS A + + L L L N I P S L L+ +
Sbjct: 50 YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109
Query: 270 SLSHNKIVGPIPDELGKLSKLQKLDLSYNAI-GGSFPVTFTNITSLVSLNLENNRLGNKI 328
K+ +G+L L+KL++++N I P F+N+T+LV ++L N +
Sbjct: 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169
Query: 329 PEGLERLQ 336
L+ L+
Sbjct: 170 VNDLQFLR 177
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 277 VGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL---ENNRLGNKIPEGLE 333
+ +PD++ S + +DLS+N + +F+N + L L+L E + +K GL
Sbjct: 23 LSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLH 80
Query: 334 RLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSY 393
L NL L N + P + ++ + L E S + L L NV++
Sbjct: 81 HLSNLI---LTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAH 137
Query: 394 NNLSGSVPP 402
N + P
Sbjct: 138 NFIHSCKLP 146
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 124 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 542 IMGKSTYGTAYKATLEDGSEV-AVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALR 597
++GK ++G A + E+ A+K L++ + E E + + P L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG----PETIVNWATRMSIAIGIARGLNYLHV 653
V +++ G L + G P+ + +A +SI GL +LH
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-YAAEISI------GLFFLH- 137
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
+ +I+ +L NV+LD + + +IADFG+ + Y APE+ +
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTP-DYIAPEIIAYQP 196
Query: 714 ANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
D ++ GV++ E+L G+ P +G D + SI++
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQP---PFDGEDEDELFQSIME 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 98/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA +G ++G
Sbjct: 5 AAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHK 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E ++ P L+ L + +V ++
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE-FSFKDNSNLYMVLEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 APGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ADFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 609 LVFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V ++MP G L + + PE WA + + +A L+ +H +IH ++ N+
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPE---KWAKFYTAEVVLA--LDAIH-SMGLIHRDVKPDNM 205
Query: 668 LLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN----TKTDVYSL 723
LLD+ + ++ADFG M Y +PE+ K + + + D +S+
Sbjct: 206 LLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 265
Query: 724 GVIILELLTGKSP 736
GV + E+L G +P
Sbjct: 266 GVFLFEMLVGDTP 278
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G +
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHM 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I G YLH +IH +L N+ L+E +I DFGL+ + Y
Sbjct: 124 IVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-NY 181
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
APE+ K + + DV+S+G I+ LL GK P E
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I G YLH +IH +L N+ L+E +I DFGL+ + Y
Sbjct: 126 IVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP-NY 183
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
APE+ K + + DV+S+G I+ LL GK P E
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I G YLH +IH +L N+ L+E +I DFGL+ + Y
Sbjct: 126 IVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP-NY 183
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
APE+ K + + DV+S+G I+ LL GK P E
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I G YLH +IH +L N+ L+E +I DFGL+ + Y
Sbjct: 130 IVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP-NY 187
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
APE+ K + + DV+S+G I+ LL GK P E
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK-GQKEFEAEAAAIGKIHHPNLLALRA 598
+ +G+ +G ++A + D A+KR+R + +++ E A+ K+ HP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 599 YYL-----------GPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARG 647
+L PK + K +L +++ R + + I + IA
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 648 LNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-------- 699
+ +LH + ++H +L SN+ ++ DFGL M
Sbjct: 131 VEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 700 XLG---YRAPELSKLKNANTKTDVYSLGVIILELL 731
+G Y +PE + + K D++SLG+I+ ELL
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 528 FLFTADDLLCATAEIMGKSTYGTAYKAT-LEDGSEVAVKRLREKT-TKGQKEFEAE-AAA 584
F ADDL +G+ YG K + G +AVKR+R ++ QK + +
Sbjct: 46 FEVKADDLEPIME--LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 585 IGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHA---RG---PETIVNWATRM 638
+ + P + L +G+ + + M SL F +G PE I+
Sbjct: 104 MRTVDCPFTVTFYGA-LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILG----- 156
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXX 698
IA+ I + L +LH + ++IH ++ SNVL++ ++ DFG+S +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 699 XXLGYRAPELS----KLKNANTKTDVYSLGVIILELLTGKSP 736
Y APE K + K+D++SLG+ ++EL + P
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TA+ ED +VAVK L+ +KE +E + + H N++ L
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 597 RAYYLGP---KGEKLLVFDFMPKGSLASFLHAR-------------GPETIVNWATRMSI 640
LG G L++ ++ G L +FL + PE ++ +
Sbjct: 116 ----LGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXX 699
+ +A+G+ +L +N IH ++ + NVLL +I DFGL+R +M
Sbjct: 172 SSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + APE ++DV+S G+++ E+ +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I G YLH +IH +L N+ L+E +I DFGL+ + Y
Sbjct: 150 IVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-NY 207
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
APE+ K + + DV+S+G I+ LL GK P E
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 25/212 (11%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
A E +GK YG ++ L G VAVK + + E E + H N+L
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFI 68
Query: 598 AYYLGPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE 654
A + + + L+ + GSL FL + E + + +A+ A GL +LHVE
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVE 124
Query: 655 -------ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YR 704
+ H + S NVL+ IAD GL+ + +G Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 705 APEL------SKLKNANTKTDVYSLGVIILEL 730
APE+ + + TD+++ G+++ E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 644 IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGY 703
I G YLH +IH +L N+ L+E +I DFGL+ + Y
Sbjct: 148 IVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP-NY 205
Query: 704 RAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738
APE+ K + + DV+S+G I+ LL GK P E
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TA+ ED +VAVK L+ +KE +E + + H N++ L
Sbjct: 48 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 107
Query: 597 RAYYLGP---KGEKLLVFDFMPKGSLASFLHARGPETIVNWATR-------MSIAIGIAR 646
LG G L++ ++ G L +FL + + R + + +A+
Sbjct: 108 ----LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRA 705
G+ +L +N IH ++ + NVLL +I DFGL+R +M + + A
Sbjct: 164 GMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 706 PELSKLKNANTKTDVYSLGVIILELLT 732
PE ++DV+S G+++ E+ +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGK-IHHPNLLALR 597
+ +G+ YG A E VAVK + K E + I K ++H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G + E + + F+ S P+ + + G+ YLH +
Sbjct: 70 --FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGI 126
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
H ++ N+LLDE+ N +I+DFGL+ + L Y APEL K + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 717 K-TDVYSLGVIILELLTGKSPGE 738
+ DV+S G+++ +L G+ P +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGK-IHHPNLLALR 597
+ +G+ YG A E VAVK + K E + I K ++H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G + E + + F+ S P+ + + G+ YLH +
Sbjct: 69 --FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGI 125
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
H ++ N+LLDE+ N +I+DFGL+ + L Y APEL K + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 717 K-TDVYSLGVIILELLTGKSPGE 738
+ DV+S G+++ +L G+ P +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGK-IHHPNLLALR 597
+ +G+ YG A E VAVK + K E + I K ++H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G + E + + F+ S P+ + + G+ YLH +
Sbjct: 69 --FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGI 125
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
H ++ N+LLDE+ N +I+DFGL+ + L Y APEL K + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 717 K-TDVYSLGVIILELLTGKSPGE 738
+ DV+S G+++ +L G+ P +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGK-IHHPNLLALR 597
+ +G+ YG A E VAVK + K E + I K ++H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G + E + + F+ S P+ + + G+ YLH +
Sbjct: 69 --FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGI 125
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
H ++ N+LLDE+ N +I+DFGL+ + L Y APEL K + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 717 K-TDVYSLGVIILELLTGKSPGE 738
+ DV+S G+++ +L G+ P +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 22/247 (8%)
Query: 533 DDLLCATAEIMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-H 590
+D+ T+E++G+ Y A +L++G E AVK + ++ + E + + +
Sbjct: 11 EDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 591 PNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNY 650
N+L L ++ LVF+ + GS+ + + + N + +A L++
Sbjct: 71 KNILELIEFF-EDDTRFYLVFEKLQGGSILAHIQK---QKHFNEREASRVVRDVAAALDF 126
Query: 651 LHVEENMIHGNLTSSNVLLD--EKTNP-RIADFGLS---RLMXXXXXXXXXXXXXXLG-- 702
LH + + H +L N+L + EK +P +I DF L +L G
Sbjct: 127 LHTK-GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 703 -YRAPELSKLKNA-----NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756
Y APE+ ++ + + D++SLGV++ +L+G P G D W V
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCG-WDRGEVCRV 244
Query: 757 WTNEVFD 763
N++F+
Sbjct: 245 CQNKLFE 251
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
+GL Y+H +IH +L N+ ++E +I DFGL+R YRA
Sbjct: 139 KGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMXGXVVTRWYRA 193
Query: 706 PE--LSKLKNANTKTDVYSLGVIILELLTGKS 735
PE L+ ++ T D++S+G I+ E++TGK+
Sbjct: 194 PEVILNWMRYTQT-VDIWSVGCIMAEMITGKT 224
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TA+ ED +VAVK L+ +KE +E + + H N++ L
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 597 RAYYLGP---KGEKLLVFDFMPKGSLASFLHARGPETIVNWATR-------MSIAIGIAR 646
LG G L++ ++ G L +FL + + R + + +A+
Sbjct: 116 ----LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXLGYRA 705
G+ +L +N IH ++ + NVLL +I DFGL+R +M + + A
Sbjct: 172 GMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 706 PELSKLKNANTKTDVYSLGVIILELLT 732
PE ++DV+S G+++ E+ +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 518 GGKLVHFDGPFLFTADDLLCATAEIMGKSTYGTAY-KATLEDGSEVAVKRL-REKTTKGQ 575
G + ++F G T DDL + +G +G + G E +K + ++++
Sbjct: 10 GRENLYFQG----TIDDLFIFKRK-LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM 64
Query: 576 KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFL---HARGPETIV 632
++ EAE + + HPN++ + + +V + G L + ARG
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHN-MYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 633 NWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP----RIADFGLSRLMXX 688
+ + + L Y H ++++H +L N+L + T+P +I DFGL+ L
Sbjct: 124 GYVAEL--MKQMMNALAYFH-SQHVVHKDLKPENILFQD-TSPHSPIKIIDFGLAELFKS 179
Query: 689 XXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
Y APE+ K ++ K D++S GV++ LLTG P
Sbjct: 180 DEHSTNAAGTAL--YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 540 AEIMGKSTYGTAYKATLEDGSE-VAVKRLREKTTKGQKEFEAEAAAIGK-IHHPNLLALR 597
+ +G+ YG A E VAVK + K E + I K ++H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ G + E + + F+ S P+ + + G+ YLH +
Sbjct: 69 --FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGI 125
Query: 658 IHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRAPELSKLKNANT 716
H ++ N+LLDE+ N +I+DFGL+ + L Y APEL K + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 717 K-TDVYSLGVIILELLTGKSPGE 738
+ DV+S G+++ +L G+ P +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSP 736
PEL K + + + DV+S G+++ +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSP 736
PEL K + + + DV+S G+++ +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSP 736
PEL K + + + DV+S G+++ +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 115 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 525 DGPFLFTADDLLCATAEIMGKSTYGTAYKAT-LEDGSEVAVK-----RLREKTTKGQKEF 578
D LF LC E++GK + + E G + AVK + ++
Sbjct: 19 DDDVLFEDVYELC---EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 75
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIV-NWATR 637
+ EA+ + HP+++ L Y G +VF+FM L + R V + A
Sbjct: 76 KREASICHMLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP---RIADFGLSRLMXXXXXXXX 694
I L Y H + N+IH ++ VLL K N ++ FG++ +
Sbjct: 135 SHYMRQILEALRYCH-DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA 192
Query: 695 XXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ K + DV+ GVI+ LL+G P
Sbjct: 193 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSP 736
PEL K + + + DV+S G+++ +L G+ P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSP 736
PEL K + + + DV+S G+++ +L G+ P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 116 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 525 DGPFLFTADDLLCATAEIMGKSTYGTAYKAT-LEDGSEVAVK-----RLREKTTKGQKEF 578
D LF LC E++GK + + E G + AVK + ++
Sbjct: 17 DDDVLFEDVYELC---EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 73
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIV-NWATR 637
+ EA+ + HP+++ L Y G +VF+FM L + R V + A
Sbjct: 74 KREASICHMLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP---RIADFGLSRLMXXXXXXXX 694
I L Y H + N+IH ++ VLL K N ++ FG++ +
Sbjct: 133 SHYMRQILEALRYCH-DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA 190
Query: 695 XXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ APE+ K + DV+ GVI+ LL+G P
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX-XLGYRA 705
G+ YLH + H ++ N+LLDE+ N +I+DFGL+ + L Y A
Sbjct: 117 GVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 706 PELSKLKNANTK-TDVYSLGVIILELLTGKSPGE 738
PEL K + + + DV+S G+++ +L G+ P +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A K + K + + ++ E EA + HPN++ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLN-YLHVEE- 655
+ +G L+FD + G L + AR + + + I + L LH +
Sbjct: 88 DS-ISEEGHHYLIFDLVTGGELFEDIVAR------EYYSEADASHCIQQILEAVLHCHQM 140
Query: 656 NMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
++H +L N+LL K ++ADFGL+ + GY +PE+ +
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 713 NANTKTDVYSLGVIILELLTGKSP 736
D+++ GVI+ LL G P
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPP 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 556 LEDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612
+E G+ A+K L ++ K+ E E + ++ P L+ L + +V +
Sbjct: 49 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVME 107
Query: 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672
++P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 108 YVPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQ 163
Query: 673 TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
++ DFG ++ + Y APE+ K N D ++LGV+I E+
Sbjct: 164 GYIQVTDFGFAKRVKGRTWTLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAA 219
Query: 733 GKSP 736
G P
Sbjct: 220 GYPP 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLAL--- 596
+G+ T+G +KA + G +VA+K++ + K A E + + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 597 ----RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ Y KG LVFDF + LA L + ++ R + + GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 142
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSR---LMXXXXXXXXXXXXXXLGYRAPE-L 708
++H ++ ++NVL+ ++ADFGL+R L L YR PE L
Sbjct: 143 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSP-----GEPMNGMDLPQWVASIVKEEWTN 759
++ D++ G I+ E+ T +SP E + Q SI E W N
Sbjct: 202 LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKT-TKGQKEFEAE-AAAIGKIHHPNLLALRAY 599
+G+ YG K + G +AVKR+R ++ QK + ++ + P +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHA---RG---PETIVNWATRMSIAIGIARGLNYLHV 653
L +G+ + + M SL F +G PE I+ IA+ I + L +LH
Sbjct: 75 -LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILG-----KIAVSIVKALEHLHS 127
Query: 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELS---- 709
+ ++IH ++ SNVL++ ++ DFG+S + Y APE
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPERINPEL 185
Query: 710 KLKNANTKTDVYSLGVIILELLTGKSP 736
K + K+D++SLG+ ++EL + P
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TA+ ED +VAVK L+ +KE +E + + H N++ L
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 597 RAYYLGP---KGEKLLVFDFMPKGSLASFLH--ARGPETIVNWATRMSIAIG-------- 643
LG G L++ ++ G L +FL +R ET +A S A
Sbjct: 116 ----LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 644 -IARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L +N IH ++ + NVLL +I DFGL+R +M +
Sbjct: 172 QVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ APE ++DV+S G+++ E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 25 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 84
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 85 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 143
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 144 VAGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 199
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 200 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 734 KSP 736
P
Sbjct: 256 YPP 258
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 31/223 (13%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
++G+ +G KA D A+K++R T + +E + ++H ++ A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 601 L------------GPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
L K + ++ G+L +H+ + R+ I L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI--LEAL 129
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG------ 702
+Y+H + +IH +L N+ +DE N +I DFGL++ + G
Sbjct: 130 SYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 703 -------YRAPE-LSKLKNANTKTDVYSLGVIILELLTGKSPG 737
Y A E L + N K D+YSLG+I E++ S G
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TA+ ED +VAVK L+ +KE +E + + H N++ L
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 597 RAYYLGP---KGEKLLVFDFMPKGSLASFLH--ARGPETIVNWA-------TR--MSIAI 642
LG G L++ ++ G L +FL +R ET +A TR + +
Sbjct: 116 ----LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXXXL 701
+A+G+ +L +N IH ++ + NVLL +I DFGL+R +M +
Sbjct: 172 QVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 702 GYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ APE ++DV+S G+++ E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLAL--- 596
+G+ T+G +KA + G +VA+K++ + K A E + + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 597 ----RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ Y KG LVFDF + LA L + ++ R + + GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 142
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSR---LMXXXXXXXXXXXXXXLGYRAPE-L 708
++H ++ ++NVL+ ++ADFGL+R L L YR PE L
Sbjct: 143 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSP-----GEPMNGMDLPQWVASIVKEEWTN 759
++ D++ G I+ E+ T +SP E + Q SI E W N
Sbjct: 202 LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLAL--- 596
+G+ T+G +KA + G +VA+K++ + K A E + + H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 597 ----RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ Y KG LVFDF + LA L + ++ R + + GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 141
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSR---LMXXXXXXXXXXXXXXLGYRAPE-L 708
++H ++ ++NVL+ ++ADFGL+R L L YR PE L
Sbjct: 142 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSP-----GEPMNGMDLPQWVASIVKEEWTN 759
++ D++ G I+ E+ T +SP E + Q SI E W N
Sbjct: 201 LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 25 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 84
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 85 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 143
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 144 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 199
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 200 YIQVTDFGFAKRVKGATWTLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 734 KSP 736
P
Sbjct: 256 YPP 258
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 543 MGKSTYGTAYKATLEDGSE-VAVKRLR-EKTTKGQKEFE-AEAAAIGKIHHPNLLALRAY 599
+G+ TYG YKA +E VA+KR+R E +G E + + ++ H N++ L++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS- 100
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
+ L+F++ + L ++ + P+ V+ S + G+N+ H +H
Sbjct: 101 VIHHNHRLHLIFEYA-ENDLKKYMD-KNPD--VSMRVIKSFLYQLINGVNFCH-SRRCLH 155
Query: 660 GNLTSSNVLL---DEKTNP--RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-LSKLKN 713
+L N+LL D P +I DFGL+R L YR PE L ++
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEIITLWYRPPEILLGSRH 214
Query: 714 ANTKTDVYSLGVIILELLTGKSPGEP 739
+T D++S+ I E+L K+P P
Sbjct: 215 YSTSVDIWSIACIWAEMLM-KTPLFP 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLL-A 595
A GK TAY D + VAVK L+ ++E +E + + +H N++
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 92
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWAT---------------RMSI 640
L A +G G L++ ++ G L +FL + I + + +S
Sbjct: 93 LGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXX 699
+ +A+G+ +L +N IH +L + N+LL +I DFGL+R +
Sbjct: 151 SYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
+ + APE ++DV+S G+ + EL + S P GM + ++KE
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS--SPYPGMPVDSKFYKMIKE 263
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 542 IMGKSTYGTAY----KATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
+ G+ T+GT K+T G VA+K++ + +E + + +HHPN++ L+
Sbjct: 30 MAGQGTFGTVQLGKEKST---GMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQ 85
Query: 598 AYY--LGPKGEKLL----VFDFMP----KGSLASFLHARGPETIVNWATRMSIAIGIARG 647
+Y+ LG + + + V +++P + + P I+ + R
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV----FLFQLIRS 141
Query: 648 LNYLHVEE-NMIHGNLTSSNVLLDEKTNP-RIADFGLSRLMXXXXXXXXXXXXXXLGYRA 705
+ LH+ N+ H ++ NVL++E ++ DFG ++ + YRA
Sbjct: 142 IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY--YRA 199
Query: 706 PEL-SKLKNANTKTDVYSLGVIILELLTGK 734
PEL ++ T D++S+G I E++ G+
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 5 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 64
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 65 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 123
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 124 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 179
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 180 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 734 KSP 736
P
Sbjct: 236 YPP 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLAGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 525 DGPFLFTADDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKG--QKEFEAEA 582
D PF D L + +G+ ++ K + ++ ++ K + QKE A
Sbjct: 3 DSPFYQHYD--LDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALK 60
Query: 583 AAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARG--PETIVNWATRMSI 640
G HPN++ L + + LV + + G L + + ET ++ R +
Sbjct: 61 LCEG---HPNIVKLHEVF-HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLV 116
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLL-DEKTN--PRIADFGLSRLMXXXXXXXXXXX 697
+ ++++H + ++H +L N+L DE N +I DFG +RL
Sbjct: 117 S-----AVSHMH-DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTP 169
Query: 698 XXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
L Y APEL + D++SLGVI+ +L+G+ P
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLXGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFAEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 115
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 116 VPGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 171
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 172 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Query: 734 KSP 736
P
Sbjct: 228 YPP 230
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + L G E A K + K + + ++ E EA + H N++ L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLN-YLHVEE- 655
+ +G LVFD + G L + AR + + + I + L LH +
Sbjct: 70 DS-ISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADASHCIQQILEAVLHCHQM 122
Query: 656 NMIHGNLTSSNVLLDEKTN---PRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
++H +L N+LL K ++ADFGL+ + GY +PE+ + +
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 713 NANTKTDVYSLGVIILELLTGKSP 736
D+++ GVI+ LL G P
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPP 205
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 609 LVFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V ++MP G L + + PE WA + + +A L+ +H IH ++ N+
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLA--LDAIH-SMGFIHRDVKPDNM 204
Query: 668 LLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN----TKTDVYSL 723
LLD+ + ++ADFG M Y +PE+ K + + + D +S+
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 724 GVIILELLTGKSP 736
GV + E+L G +P
Sbjct: 265 GVFLYEMLVGDTP 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 609 LVFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V ++MP G L + + PE WA + + +A L+ +H IH ++ N+
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLA--LDAIH-SMGFIHRDVKPDNM 204
Query: 668 LLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN----TKTDVYSL 723
LLD+ + ++ADFG M Y +PE+ K + + + D +S+
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 724 GVIILELLTGKSP 736
GV + E+L G +P
Sbjct: 265 GVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 609 LVFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667
+V ++MP G L + + PE WA + + +A L+ +H IH ++ N+
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLA--LDAIH-SMGFIHRDVKPDNM 199
Query: 668 LLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNAN----TKTDVYSL 723
LLD+ + ++ADFG M Y +PE+ K + + + D +S+
Sbjct: 200 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259
Query: 724 GVIILELLTGKSP 736
GV + E+L G +P
Sbjct: 260 GVFLYEMLVGDTP 272
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TAY D + VAVK L+ ++E +E + + +H N++ L
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 597 R-AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWAT---------------RMSI 640
A +G G L++ ++ G L +FL + I + + +S
Sbjct: 116 LGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXX 699
+ +A+G+ +L +N IH +L + N+LL +I DFGL+R +
Sbjct: 174 SYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
+ + APE ++DV+S G+ + EL + S P GM + ++KE
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS--SPYPGMPVDSKFYKMIKE 286
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLL-A 595
A GK TAY D + VAVK L+ ++E +E + + +H N++
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 596 LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWAT---------------RMSI 640
L A +G G L++ ++ G L +FL + I + + +S
Sbjct: 116 LGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXX 699
+ +A+G+ +L +N IH +L + N+LL +I DFGL+R +
Sbjct: 174 SYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
+ + APE ++DV+S G+ + EL + S P GM + ++KE
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS--SPYPGMPVDSKFYKMIKE 286
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TAY D + VAVK L+ ++E +E + + +H N++ L
Sbjct: 51 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 110
Query: 597 R-AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWAT---------------RMSI 640
A +G G L++ ++ G L +FL + I + + +S
Sbjct: 111 LGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXX 699
+ +A+G+ +L +N IH +L + N+LL +I DFGL+R +
Sbjct: 169 SYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
+ + APE ++DV+S G+ + EL + S P GM + ++KE
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS--SPYPGMPVDSKFYKMIKE 281
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TAY D + VAVK L+ ++E +E + + +H N++ L
Sbjct: 49 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 108
Query: 597 R-AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWAT---------------RMSI 640
A +G G L++ ++ G L +FL + I + + +S
Sbjct: 109 LGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXXXXXXXXX 699
+ +A+G+ +L +N IH +L + N+LL +I DFGL+R +
Sbjct: 167 SYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 700 XLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755
+ + APE ++DV+S G+ + EL + S P GM + ++KE
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS--SPYPGMPVDSKFYKMIKE 279
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 201 GSIPLSLTRLPSLSVLALQHNNLS---GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP 257
G S LPSL L L N LS +++G ++ L++L+L N G I
Sbjct: 361 GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTIS------LKYLDLSFN---GVIT 411
Query: 258 VSLGKLGL--LQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITS 313
+S LGL L+ + H+ K + L L L LD+S+ +F F ++S
Sbjct: 412 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSS 470
Query: 314 LVSLNLENNRLG-NKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDF 372
L L + N N +P+ L+NLT L+L Q + P ++S + L++S N+F
Sbjct: 471 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Query: 373 TGEISPSLASLANLTSFNVSYNNLSGS 399
+ L +L + S N++ S
Sbjct: 531 FSLDTFPYKCLNSLQVLDYSLNHIMTS 557
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 543 MGKSTYGTAYKATLEDGSEV-AVKRLREKTTKGQKEFE---AEAAAIGKIHHPNLLALRA 598
+GK ++G D ++ A+K + ++ + E E + + HP L+ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-W 81
Query: 599 YYLGPKGEKLLVFDFMPKGSLASFLHAR---GPETIVNWATRMSIAIGIARGLNYLHVEE 655
Y + + +V D + G L L ET+ + + +A L+YL +
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA------LDYLQ-NQ 134
Query: 656 NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL-SKLKNA 714
+IH ++ N+LLDE + I DF ++ ++ Y APE+ S K A
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK--PYMAPEMFSSRKGA 192
Query: 715 --NTKTDVYSLGVIILELLTGKSP 736
+ D +SLGV ELL G+ P
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 541 EIMGKSTYGTAYKAT-LEDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALR 597
E +GK + + + G E A + K + + ++ E EA + HPN++ L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLN-YLHVEE- 655
+ +G L+FD + G L + AR + + + I + L LH +
Sbjct: 77 DS-ISEEGHHYLIFDLVTGGELFEDIVAR------EYYSEADASHCIQQILEAVLHCHQM 129
Query: 656 NMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLK 712
++H NL N+LL K ++ADFGL+ + GY +PE+ +
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 713 NANTKTDVYSLGVIILELLTGKSP 736
D+++ GVI+ LL G P
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPP 212
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 115
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+P G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 116 VPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 171
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 172 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Query: 734 KSP 736
P
Sbjct: 228 YPP 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+++D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLIIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 542 IMGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAY 599
++ + + Y+A + G E A+KRL + + E + K+ HPN++ +
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 600 YLGPKGE------KLLVFDFMPKGSLASFL---HARGPETIVNWATRMSIAIGIARGLNY 650
K E + L+ + KG L FL +RGP ++ T + I R + +
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP---LSCDTVLKIFYQTCRAVQH 151
Query: 651 LHVEEN-MIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXL-------- 701
+H ++ +IH +L N+LL + ++ DFG + + L
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 702 ---GYRAPELSKLKN---ANTKTDVYSLGVIILELLTGKSPGE 738
YR PE+ L + K D+++LG I+ L + P E
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 581 EAAAIGKIHHPNLLALRAYYLGPKGEKL-LVFDFMPKGSLASFLHARGPETIVNWATRMS 639
E A + K+ HPN++ L P + L +VF+ + +G + + + + R
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
+ +G+ YLH ++ +IH ++ SN+L+ E + +IADFG+S
Sbjct: 143 FQ-DLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGT 200
Query: 700 XLGYRAPE-LSKLKN--ANTKTDVYSLGVIILELLTGKSP 736
+ APE LS+ + + DV+++GV + + G+ P
Sbjct: 201 P-AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 260 LGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL 319
G+L L ++ L N++ G P+ S +Q+L L N I F + L +LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 320 ENNRLGNKIPEGLERLQNLTVLNLKNNQF 348
+N++ +P E L +LT LNL +N F
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 284 LGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRL---GNKIPEGLERLQNLTV 340
G+L L KL+L N + G P F + + L L N++ NK+ GL +L+
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLK---T 106
Query: 341 LNLKNNQFKGHIPETIGNISGINQLDLSENDF 372
LNL +NQ +P + +++ + L+L+ N F
Sbjct: 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 245 LNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSF 304
L L N + G P + +QE+ L NKI L +L+ L+L N I
Sbjct: 59 LELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM 118
Query: 305 PVTFTNITSLVSLNLENN 322
P +F ++ SL SLNL +N
Sbjct: 119 PGSFEHLNSLTSLNLASN 136
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 319 LENNRLGNKIPEGL-ERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEIS 377
L +N LG +GL RL +L L LK NQ G P S I +L L EN +
Sbjct: 36 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISN 95
Query: 378 PSLASLANLTSFNVSYNNLSGSVP 401
L L + N+ N +S +P
Sbjct: 96 KMFLGLHQLKTLNLYDNQISCVMP 119
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 16/137 (11%)
Query: 609 LVFDFMPKGSLASFL---HARGPETIVN-WATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
LV D+ G L + L R PE + + M IAI L+Y +H ++
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-------VHRDIKP 203
Query: 665 SNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANT-----KTD 719
N+L+D + R+ADFG + Y +PE+ + + D
Sbjct: 204 DNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECD 263
Query: 720 VYSLGVIILELLTGKSP 736
+SLGV + E+L G++P
Sbjct: 264 WWSLGVCMYEMLYGETP 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I ++ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 138 LPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXXX 197
L +L + L NN++S + LQ L +S N L+ IPP+L +S
Sbjct: 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHDN-- 133
Query: 198 XXXGSIPLSLTRLPSLSVLALQHNN---LSGSVPNNWGVLAGN-KSYQLQFLNLDHNLIA 253
+ ++P L++ N + G+ N G G +L +L + +
Sbjct: 134 --------RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185
Query: 254 GTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITS 313
G IP L + L E+ L HNKI ++L + SKL +L L +N I + + + +
Sbjct: 186 G-IPKDLPET--LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPT 242
Query: 314 LVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
L L+L+NN+L +++P GL L+ L V+ L N
Sbjct: 243 LRELHLDNNKL-SRVPAGLPDLKLLQVVYLHTN 274
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 244 FLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYN---AI 300
L+L +N I+ L L + L +NKI L KLQKL +S N I
Sbjct: 58 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 117
Query: 301 GGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKNNQFK--GHIPETIG 357
+ P +SLV L + +NR+ K+P+G+ L+N+ + + N + G P
Sbjct: 118 PPNLP------SSLVELRIHDNRI-RKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170
Query: 358 NISGINQLDLSENDFTG 374
+ +N L +SE TG
Sbjct: 171 GLK-LNYLRISEAKLTG 186
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX 700
A IA GL +L + +I+ +L NV+LD + + +IADFG+ +
Sbjct: 127 AAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGT 184
Query: 701 LGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
Y APE+ + D ++ GV++ E+L G++P E G D + SI++
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GEDEDELFQSIME 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 543 MGKSTYGTAYKAT-LEDGSEVAVKRLREKTTKGQKEFEA--EAAAIGKIHHPNLLAL--- 596
+G+ T+G +KA + G +VA+K++ + K A E + + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 597 ----RAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLH 652
+ Y K LVFDF + LA L + ++ R + + GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 142
Query: 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSR---LMXXXXXXXXXXXXXXLGYRAPE-L 708
++H ++ ++NVL+ ++ADFGL+R L L YR PE L
Sbjct: 143 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSP-----GEPMNGMDLPQWVASIVKEEWTN 759
++ D++ G I+ E+ T +SP E + Q SI E W N
Sbjct: 202 LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 641 AIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXX 700
A IA GL +L + +I+ +L NV+LD + + +IADFG+ +
Sbjct: 448 AAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGT 505
Query: 701 LGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754
Y APE+ + D ++ GV++ E+L G++P E G D + SI++
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GEDEDELFQSIME 556
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 131/335 (39%), Gaps = 63/335 (18%)
Query: 65 HGFLRSWNDSGVGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHD 124
HGF+ S N S + +K +K + L + ++ E L L+ L+L
Sbjct: 275 HGFVFSLN-------SRVFETLKDLK----VLNLAYNKINKIADEAFYGLDNLQVLNLSY 323
Query: 125 NLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNAL--IGAIP-- 180
NLL + LP + + L N ++ + LQTLDL +NAL I IP
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSI 383
Query: 181 PSLANSTXXXXXXXXXXXXXGSIPLS------------LTRLPSLSVLALQHNNLSGSVP 228
P + S I LS L R+P L +L L N S
Sbjct: 384 PDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCS- 442
Query: 229 NNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLS 288
G +++ L+ L L N+ L L E L + G LS
Sbjct: 443 ---GDQTPSENPSLEQLFLGENM-----------LQLAWETELCWDVFEG--------LS 480
Query: 289 KLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLG----NKIPEGLERLQNLTVLNLK 344
LQ L L++N + P F+++T+L L+L +NRL N +P LE +L++
Sbjct: 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLE------ILDIS 534
Query: 345 NNQFKGHIPETIGNISGINQLDLSENDFTGEISPS 379
NQ P+ ++S LD++ N F E S
Sbjct: 535 RNQLLAPNPDVFVSLS---VLDITHNKFICECELS 566
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 234 LAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKL 293
AG ++ L+L H + L L+ ++L++NKI + L LQ L
Sbjct: 260 FAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVL 319
Query: 294 DLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
+LSYN +G + F + + ++L+ N + + + L+ L L+L++N
Sbjct: 320 NLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 94/256 (36%), Gaps = 37/256 (14%)
Query: 157 PSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVL 216
PS G +L+++D S+N + L PL + +LS
Sbjct: 142 PSFGKLNSLKSIDFSSNQIFLVCEHELE-------------------PL---QGKTLSFF 179
Query: 217 ALQHNNLSGSVPNNWG-VLAGNKSYQLQFLNLDHN----LIAGTIPVSLGKLGLLQEISL 271
+L N+L V +WG + ++ L+ L++ N I G ++ K I
Sbjct: 180 SLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA 239
Query: 272 SH--------NKIVGPIPDELGKLSK--LQKLDLSYNAIGGSFPVTFTNITSLVSLNLEN 321
H + I P + L++ ++ LDLS+ + F + L LNL
Sbjct: 240 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAY 299
Query: 322 NRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLA 381
N++ E L NL VLNL N + + +DL +N +
Sbjct: 300 NKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359
Query: 382 SLANLTSFNVSYNNLS 397
L L + ++ N L+
Sbjct: 360 FLEKLQTLDLRDNALT 375
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 640 IAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXX 699
IA+ I + L +LH + ++IH ++ SNVL++ + DFG+S +
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCK 200
Query: 700 XLGYRAPELS----KLKNANTKTDVYSLGVIILELLTGKSP 736
Y APE K + K+D++SLG+ +EL + P
Sbjct: 201 P--YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 543 MGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIG---KI-HHPNLLALR 597
+G +YG +K + EDG AVKR +G K+ + A +G K+ HP + L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNYLHVE 654
+ +G L + + SL A G PE V W + +A +LH
Sbjct: 124 QAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQV-WGYLRDTLLALA----HLH-S 175
Query: 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNA 714
+ ++H ++ +N+ L + ++ DFGL L+ Y APEL + +
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQ-GSY 232
Query: 715 NTKTDVYSLGVIILEL 730
T DV+SLG+ ILE+
Sbjct: 233 GTAADVFSLGLTILEV 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 257
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 258 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 315
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 316 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 609 LVFDFMPKGSLASFL---HARGPETIVNWAT-RMSIAIGIARGLNYLHVEENMIHGNLTS 664
LV D+ G L + L + PE + + M +AI L+Y +H ++
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY-------VHRDIKP 203
Query: 665 SNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK-----LKNANTKTD 719
NVLLD + R+ADFG M Y +PE+ + + + D
Sbjct: 204 DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECD 263
Query: 720 VYSLGVIILELLTGKSP 736
+SLGV + E+L G++P
Sbjct: 264 WWSLGVCMYEMLYGETP 280
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 230 NWGVLAGNKSYQLQFLNLDHNLIAGT--IPVSLGKLGLLQEISLSHNKIVGPIPDELGKL 287
+ G K LQ L+L H+ I + + L L LQ ++LS+N+ +G +
Sbjct: 339 DLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKEC 398
Query: 288 SKLQKLDLSYNAIGGSFPVT-FTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
+L+ LD+++ + P + F N+ L LNL + L L LQ+L LNL+ N
Sbjct: 399 PQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGN 458
Query: 347 QFK-GHIPET-----IGNIS---------------------GINQLDLSENDFTGEISPS 379
F+ G I +T +G++ +N LDLS N TG+ +
Sbjct: 459 SFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDA 518
Query: 380 LASLANLTSFNVSYNNLSGSVPPLLSKKFNSSSFVG 415
L+ L L N++ NN+ +PP L + S +
Sbjct: 519 LSHLKGLY-LNMASNNIR-IIPPHLLPALSQQSIIN 552
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 210 LPSLSVLALQHNNLSGSVPNNWGVLAGN--------------------KSYQLQFLNLDH 249
LP L VL LQHN LS + + V N L L+L H
Sbjct: 72 LPLLKVLNLQHNELS-QISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSH 130
Query: 250 NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKL--SKLQKLDLSYNAIGGSFPVT 307
N ++ T + +L LQE+ L+ NKI+ +EL L S L+KLDLS N + P
Sbjct: 131 NGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGC 190
Query: 308 FTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTV--LNLKNNQFKGHIPETIGNISGIN- 363
F I L +L L N +L + E L L N ++ L+L NNQ T + N
Sbjct: 191 FQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNL 250
Query: 364 -QLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
QLDLS N+ + S + L +L ++ YNN+ P
Sbjct: 251 TQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSP 289
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 272 SHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEG 331
SH K+ IPD+L S + L+L++N + P FT + L L+ N + PE
Sbjct: 12 SHLKLTH-IPDDLP--SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPEL 68
Query: 332 LERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNV 391
+ L L VLNL++N+ +T + + +LDL N S + NL ++
Sbjct: 69 CQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDL 128
Query: 392 SYNNLSGS 399
S+N LS +
Sbjct: 129 SHNGLSST 136
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 269 ISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKI 328
++L+HN++ P + S+L LD +N+I P + L LNL++N L
Sbjct: 30 LNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQIS 89
Query: 329 PEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEN 370
+ NLT L+L +N N + +LDLS N
Sbjct: 90 DQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHN 131
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 266 LQEISLSHNKIVGPIPDELG--KLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNR 323
+Q +SL++N+++ K + L +LDLSYN + +F+ + SL L+LE N
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 324 LGNKIPEGLERLQNLTVLNLK 344
+ P L NL L+LK
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLK 304
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 268 EISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGS--FPVTFTNITSLVSLNLENNRLG 325
EI LS+NK + + LQ+L L A+ P F + +L L+L NN +
Sbjct: 434 EIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIA 493
Query: 326 NKIPEGLERLQNLTVLNLKNN 346
N + LE L+NL +L+ ++N
Sbjct: 494 NINEDLLEGLENLEILDFQHN 514
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 245 LNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSF 304
LNL HN + P + + L + N I P+ L L+ L+L +N +
Sbjct: 30 LNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQIS 89
Query: 305 PVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
TF T+L L+L +N + + +NL L+L +N
Sbjct: 90 DQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHN 131
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 609 LVFDFMPKGSLASFL---HARGPETIVN-WATRMSIAIGIARGLNYLHVEENMIHGNLTS 664
LV D+ G L + L + PE + + M +AI L+Y +H ++
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY-------VHRDIKP 219
Query: 665 SNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSK-----LKNANTKTD 719
NVLLD + R+ADFG M Y +PE+ + + + D
Sbjct: 220 DNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECD 279
Query: 720 VYSLGVIILELLTGKSP 736
+SLGV + E+L G++P
Sbjct: 280 WWSLGVCMYEMLYGETP 296
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 243
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 244 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 302 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 290 LQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKNNQF 348
+QKL + +NAI P F N+ L L LE N L + +P G+ LT L++ NN
Sbjct: 101 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNL 159
Query: 349 KGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSKKF 408
+ +T + + L LS N T L+ + +L NVSYN LS P+ ++
Sbjct: 160 ERIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLSTLAIPIAVEEL 216
Query: 409 NSS 411
++S
Sbjct: 217 DAS 219
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 47/293 (16%)
Query: 115 HALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSI-GNCPNLQTLDLSNN 173
H ++KL + N + P +P L + L N LS S+P I N P L TL +SNN
Sbjct: 99 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNN 157
Query: 174 ALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSG-SVP---- 228
L I +T + LSL +PSL + +N LS ++P
Sbjct: 158 NL-ERIEDDTFQATTSLQNLQLSSNRLTHVDLSL--IPSLFHANVSYNLLSTLAIPIAVE 214
Query: 229 ------NNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPD 282
N+ V+ G + +L L L HN + T + L GL+ E+ LS+N++ +
Sbjct: 215 ELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWL-LNYPGLV-EVDLSYNELEKIMYH 272
Query: 283 ELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342
K+ +L++L +S N LV+LNL G IP L VL+
Sbjct: 273 PFVKMQRLERLYISNN--------------RLVALNL----YGQPIP-------TLKVLD 307
Query: 343 LKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNN 395
L +N H+ + L L N ++ L++ L + +S+N+
Sbjct: 308 LSHNHL-LHVERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLSHND 356
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 201 GSIPLSLTRLPSLSVLALQHNNLS---GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP 257
G S LPSL L L N LS +++G + L++L+L N G I
Sbjct: 337 GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTS------LKYLDLSFN---GVIT 387
Query: 258 VSLGKLGL--LQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITS 313
+S LGL L+ + H+ K + L L L LD+S+ +F F ++S
Sbjct: 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 314 LVSLNLENNRLG-NKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDF 372
L L + N N +P+ L+NLT L+L Q + P ++S + L++S N+F
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Query: 373 TGEISPSLASLANLTSFNVSYNNLSGS 399
+ L +L + S N++ S
Sbjct: 507 FSLDTFPYKCLNSLQVLDYSLNHIMTS 533
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 290 LQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKNNQF 348
+QKL + +NAI P F N+ L L LE N L +P G+ LT L++ NN
Sbjct: 95 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNL 153
Query: 349 KGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSKKF 408
+ +T + + L LS N T L+ + +L NVSYN LS P+ ++
Sbjct: 154 ERIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLSTLAIPIAVEEL 210
Query: 409 NSS 411
++S
Sbjct: 211 DAS 213
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 115 HALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSI-GNCPNLQTLDLSNN 173
H ++KL + N + P +P L + L N LS S+P I N P L TL +SNN
Sbjct: 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNN 151
Query: 174 ALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSG-SVP---- 228
L I +T + LSL +PSL + +N LS ++P
Sbjct: 152 NL-ERIEDDTFQATTSLQNLQLSSNRLTHVDLSL--IPSLFHANVSYNLLSTLAIPIAVE 208
Query: 229 ------NNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPD 282
N+ V+ G + +L L L HN + T + L GL+ E+ LS+N++ +
Sbjct: 209 ELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWL-LNYPGLV-EVDLSYNELEKIMYH 266
Query: 283 ELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342
K+ +L++L +S N LV+LNL G IP L VL+
Sbjct: 267 PFVKMQRLERLYISNN--------------RLVALNL----YGQPIP-------TLKVLD 301
Query: 343 LKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLT 387
L +N H+ + L L N + +L NLT
Sbjct: 302 LSHNHL-LHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLT 345
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 51 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 109
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+DE+
Sbjct: 110 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDEQG 165
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 166 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
Query: 734 KSP 736
P
Sbjct: 222 YPP 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPEAL----APEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAACKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y APE+ K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 543 MGKSTYGTAYKATLED---GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ ++G ++ +ED G + AVK++R + + + E A + P ++ L Y
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPL--Y 151
Query: 600 YLGPKGEKLLVF-DFMPKGSLASFLHARG--PETIVNWATRMSIAIGIA-RGLNYLHVEE 655
+G + +F + + GSL + +G PE R +G A GL YLH
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED------RALYYLGQALEGLEYLH-SR 204
Query: 656 NMIHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSK 710
++HG++ + NVLL + ++ + DFG + + + + APE+
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 711 LKNANTKTDVYSLGVIILELLTGKSP 736
++ + K DV+S ++L +L G P
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 543 MGKSTYGTAYKATLED---GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
+G+ ++G ++ +ED G + AVK++R + + + E A + P ++ L Y
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPL--Y 132
Query: 600 YLGPKGEKLLVF-DFMPKGSLASFLHARG--PETIVNWATRMSIAIGIA-RGLNYLHVEE 655
+G + +F + + GSL + +G PE R +G A GL YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED------RALYYLGQALEGLEYLH-SR 185
Query: 656 NMIHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSK 710
++HG++ + NVLL + ++ + DFG + + + + APE+
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 711 LKNANTKTDVYSLGVIILELLTGKSP 736
++ + K DV+S ++L +L G P
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 269 ISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKI 328
+ L N+I DE L++L+L+ N + P F N+ +L +L L +NRL I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLI 95
Query: 329 PEGL-ERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLT 387
P G+ L NLT L++ N+ + ++ + L++ +ND + + L +L
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155
Query: 388 SFNVSYNNLSGSVP 401
+ NL+ S+P
Sbjct: 156 QLTLEKCNLT-SIP 168
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 210 LPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGK-LGLLQE 268
P L L L N +S P A N + L+ L L N + IP+ + L L +
Sbjct: 55 FPHLEELELNENIVSAVEPG-----AFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTK 108
Query: 269 ISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKI 328
+ +S NKIV + L L+ L++ N + F+ + SL L LE L +
Sbjct: 109 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168
Query: 329 PEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTS 388
E L L L VL L++ + + + L++S + ++P+ NLTS
Sbjct: 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTS 228
Query: 389 FNVSYNNLSGSVPPL 403
++++ NL+ +VP L
Sbjct: 229 LSITHCNLT-AVPYL 242
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 212 SLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISL 271
+L+ L++ H NL+ +VP LA L+FLNL +N I+ L +L LQEI L
Sbjct: 225 NLTSLSITHCNLT-AVP----YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQL 279
Query: 272 SHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLG 325
++ P L+ L+ L++S N + F ++ +L +L L++N L
Sbjct: 280 VGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 121/329 (36%), Gaps = 44/329 (13%)
Query: 79 CSGGWAGIKCVKGQVIAI-----------QLPWRRLGGRISEKISQLHALRKLSLHDNLL 127
CS + C + + +A+ L R+ ++ + L +L L++N++
Sbjct: 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV 68
Query: 128 AGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSI-GNCPNLQTLDLSNNALI---------- 176
+ P + L NLR + L +NRL IP + NL LD+S N ++
Sbjct: 69 SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDL 127
Query: 177 -------------GAIPPSLANSTXXXXXXXXXXXXXGSIPL-SLTRLPSLSVLALQHNN 222
I + SIP +L+ L L VL L+H N
Sbjct: 128 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN 187
Query: 223 LSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTI-PVSLGKLGLLQEISLSHNKIVGPIP 281
++ ++ L Y+L+ L + H T+ P L L L +S++H +
Sbjct: 188 INAIRDYSFKRL-----YRLKVLEISHWPYLDTMTPNCLYGLNL-TSLSITHCNLTAVPY 241
Query: 282 DELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVL 341
+ L L+ L+LSYN I + L + L +L P L L VL
Sbjct: 242 LAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVL 301
Query: 342 NLKNNQFKGHIPETIGNISGINQLDLSEN 370
N+ NQ ++ + L L N
Sbjct: 302 NVSGNQLTTLEESVFHSVGNLETLILDSN 330
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 559 GSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-----GEKLLV 610
G VAVK+L + T ++ + E + ++H N+++L + K + LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAI-GIARGLNYLHVEENMIHGNLTSSNVLL 669
+ M +L +H RMS + + G+ +LH +IH +L SN+++
Sbjct: 106 MELM-DANLCQVIHMELDHE------RMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVV 157
Query: 670 DEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILE 729
+I DFGL+R YRAPE+ D++S+G I+ E
Sbjct: 158 KSDCTLKILDFGLARTASTNFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 730 LLTGKSPGEPMNGMDLPQW 748
L+ G + + +D QW
Sbjct: 216 LVKGSVIFQGTDHID--QW 232
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 503 AAPKAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-L 556
AA K G+E ES E K L ++ P TA + +G ++G
Sbjct: 4 AAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 557 EDGSEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613
E G+ A+K L ++ K+ E E + ++ P L+ L + +V ++
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEY 122
Query: 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT 673
+ G + F H R R A I YLH ++I+ +L N+L+D++
Sbjct: 123 VAGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQG 178
Query: 674 NPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTG 733
++ DFG ++ + Y AP + K N D ++LGV+I E+ G
Sbjct: 179 YIQVTDFGFAKRVKGRTWXLCGTPE----YLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 734 KSP 736
P
Sbjct: 235 YPP 237
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 540 AEIMGKSTYGTAYKATLEDGS-EVAVKRLREKTTKGQKE-FEAEAAAIGKI-HHPNLLAL 596
A GK TA+ ED +VAVK L+ +KE +E + + H N++ L
Sbjct: 41 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 100
Query: 597 RAYYLGP---KGEKLLVFDFMPKGSLASFLHARG-------------PETIVNWATR--- 637
LG G L++ ++ G L +FL + PE + R
Sbjct: 101 ----LGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 638 ----MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSR-LMXXXXXX 692
+ + +A+G+ +L +N IH ++ + NVLL +I DFGL+R +M
Sbjct: 157 LRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 693 XXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLT 732
+ + APE ++DV+S G+++ E+ +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 118
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 119 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 177 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 124
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 125 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 182
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 183 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 117
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 118 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 175
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 176 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 31/223 (13%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
++G+ +G KA D A+K++R T + +E + ++H ++ A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 601 L------------GPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
L K + ++ +L +H+ + R+ I L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI--LEAL 129
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG------ 702
+Y+H + +IH +L N+ +DE N +I DFGL++ + G
Sbjct: 130 SYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 703 -------YRAPE-LSKLKNANTKTDVYSLGVIILELLTGKSPG 737
Y A E L + N K D+YSLG+I E++ S G
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 118
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 119 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 177 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Query: 207 LTRLPSLSVLALQHNNLSGSVPN-NWGVLAGNKSYQLQFLNLDHNLIAGT--IPVSLGKL 263
L ++ + + +L H + G+V + GV K LQ L+L HN I + + L L
Sbjct: 313 LCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNL 372
Query: 264 GLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVT-FTNITSLVSLNLENN 322
LQ ++LSHN+ +G + +L+ LDL++ + + P + F N+ L LNL
Sbjct: 373 SHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYC 432
Query: 323 RLGNKIPEGLERLQNLTVLNLKNNQFK-GHIPET--IGNISGINQLDLSENDFTGEISPS 379
L L L L LNLK N F+ G I +T + + + L LS +
Sbjct: 433 FLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQA 492
Query: 380 LASLANLTSFNVSYNNLS 397
SL ++ ++S+N+L+
Sbjct: 493 FHSLGKMSHVDLSHNSLT 510
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638
E E + K++HP ++ ++ ++ + +V + M G L F G + + ++
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGEL--FDKVVGNKRLKEATCKL 118
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMXXXXXXXXX 695
+ + YLH E +IH +L NVLL +E +I DFG S+++
Sbjct: 119 YF-YQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 696 XXXXXLGYRAPE-LSKLKNA--NTKTDVYSLGVIILELLTGKSP 736
Y APE L + A N D +SLGVI+ L+G P
Sbjct: 177 CGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 209 RLPSLSVLALQHNNLSGSVPNNWGV--------LAGN-----------KSYQLQFLNLDH 249
+LP L VL LQHN LS + L N K L L+L H
Sbjct: 71 KLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 130
Query: 250 NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKL--SKLQKLDLSYNAIGGSFPVT 307
N ++ T + +L LQE+ LS+NKI +EL S L+KL+LS N I P
Sbjct: 131 NGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190
Query: 308 FTNITSLVSLNLENNRLGNKIPEGLE-RLQNLTV--LNLKNNQFKGHIPETIGNI--SGI 362
F I L L L N +LG + E L L N ++ L+L N+Q T + + +
Sbjct: 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNL 250
Query: 363 NQLDLSENDFTGEISPSLASLANLTSFNVSYNNL 396
LDLS N+ + S A L L F + YNN+
Sbjct: 251 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 272 SHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEG 331
SH K+ +PD+L + + L+L++N + FT + L SL++ N + PE
Sbjct: 12 SHLKLTQ-VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 68
Query: 332 LERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNV 391
++L L VLNL++N+ +T + + +L L N + NL + ++
Sbjct: 69 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128
Query: 392 SYNNLSGS 399
S+N LS +
Sbjct: 129 SHNGLSST 136
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 245 LNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSF 304
LNL HN + + + L + + N I P+ KL L+ L+L +N +
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 305 PVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
TF T+L L+L +N + + +NL L+L +N
Sbjct: 90 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 131
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 559 GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGS 618
G + A+K L + + K ++E + A G H +L + K L++ + M G
Sbjct: 54 GQKCALKLLYD-SPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGE 112
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP--- 675
L S + RG + I I + +LH N+ H ++ N+L K
Sbjct: 113 LFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVL 170
Query: 676 RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS 735
++ DFG ++ Y APE+ + + D++SLGVI+ LL G
Sbjct: 171 KLTDFGFAKETTQNALQTPCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 227
Query: 736 P 736
P
Sbjct: 228 P 228
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 209 RLPSLSVLALQHNNLSGSVPNNWGV--------LAGN-----------KSYQLQFLNLDH 249
+LP L VL LQHN LS + L N K L L+L H
Sbjct: 81 KLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 140
Query: 250 NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKL--SKLQKLDLSYNAIGGSFPVT 307
N ++ T + +L LQE+ LS+NKI +EL S L+KL+LS N I P
Sbjct: 141 NGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 200
Query: 308 FTNITSLVSLNLENNRLGNKIPEGLE-RLQNLTV--LNLKNNQFKGHIPETIGNI--SGI 362
F I L L L N +LG + E L L N ++ L+L N+Q T + + +
Sbjct: 201 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNL 260
Query: 363 NQLDLSENDFTGEISPSLASLANLTSFNVSYNNL 396
LDLS N+ + S A L L F + YNN+
Sbjct: 261 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 272 SHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEG 331
SH K+ +PD+L + + L+L++N + FT + L SL++ N + PE
Sbjct: 22 SHLKLTQ-VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 78
Query: 332 LERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNV 391
++L L VLNL++N+ +T + + +L L N + NL + ++
Sbjct: 79 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 138
Query: 392 SYNNLSGS 399
S+N LS +
Sbjct: 139 SHNGLSST 146
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 245 LNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSF 304
LNL HN + + + L + + N I P+ KL L+ L+L +N +
Sbjct: 40 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 99
Query: 305 PVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
TF T+L L+L +N + + +NL L+L +N
Sbjct: 100 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 141
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 14/235 (5%)
Query: 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAY 599
AE +G+ +G ++ + + + + Q + E + + H N+L L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 600 YLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIH 659
+ + E +++F+F+ + ++ E +N +S + L +LH N+ H
Sbjct: 70 FESME-ELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEALQFLH-SHNIGH 125
Query: 660 GNLTSSNVLLDEK--TNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTK 717
++ N++ + + +I +FG +R + Y APE+ + +T
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPEVHQHDVVSTA 183
Query: 718 TDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEWTNEVFDLELMRDNTI 772
TD++SLG ++ LL+G +P Q + +I+ E+T FD E ++ +I
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETN---QQIIENIMNAEYT---FDEEAFKEISI 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 31/223 (13%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYY 600
++G+ +G KA D A+K++R T + +E + ++H ++ A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 601 L------------GPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648
L K + ++ +L +H+ + R+ I L
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI--LEAL 129
Query: 649 NYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG------ 702
+Y+H + +IH NL N+ +DE N +I DFGL++ + G
Sbjct: 130 SYIH-SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 703 -------YRAPE-LSKLKNANTKTDVYSLGVIILELLTGKSPG 737
Y A E L + N K D YSLG+I E + S G
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTG 231
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 559 GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGS 618
G + A+K L + + K ++E + A G H +L + K L++ + M G
Sbjct: 35 GQKCALKLLYD-SPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGE 93
Query: 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNP--- 675
L S + RG + I I + +LH N+ H ++ N+L K
Sbjct: 94 LFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVL 151
Query: 676 RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS 735
++ DFG ++ Y APE+ + + D++SLGVI+ LL G
Sbjct: 152 KLTDFGFAKETTQNALQTPCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 208
Query: 736 P 736
P
Sbjct: 209 P 209
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 559 GSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG-----EKLLV 610
G VAVK+L + T ++ + E + ++H N+++L + K + LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAI-GIARGLNYLHVEENMIHGNLTSSNVLL 669
+ M +L +H RMS + + G+ +LH +IH +L SN+++
Sbjct: 108 MELM-DANLCQVIHMELDHE------RMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVV 159
Query: 670 DEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILE 729
+I DFGL+R YRAPE+ D++S+G I+ E
Sbjct: 160 KSDCTLKILDFGLARTACTNFMMTPYVVTRY--YRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 730 LLTGKSPGEPMNGMDLPQW 748
L+ G + + +D QW
Sbjct: 218 LVKGCVIFQGTDHID--QW 234
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 209 RLPSLSVLALQHNNLSGSVPNNWGV--------LAGN-----------KSYQLQFLNLDH 249
+LP L VL LQHN LS + L N K L L+L H
Sbjct: 76 KLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 135
Query: 250 NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKL--SKLQKLDLSYNAIGGSFPVT 307
N ++ T + +L LQE+ LS+NKI +EL S L+KL+LS N I P
Sbjct: 136 NGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 195
Query: 308 FTNITSLVSLNLENNRLGNKIPEGLE-RLQNLTV--LNLKNNQFKGHIPETIGNI--SGI 362
F I L L L N +LG + E L L N ++ L+L N+Q T + + +
Sbjct: 196 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNL 255
Query: 363 NQLDLSENDFTGEISPSLASLANLTSFNVSYNNL 396
LDLS N+ + S A L L F + YNN+
Sbjct: 256 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI 289
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 272 SHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEG 331
SH K+ +PD+L + + L+L++N + FT + L SL++ N + PE
Sbjct: 17 SHLKLTQ-VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPEL 73
Query: 332 LERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNV 391
++L L VLNL++N+ +T + + +L L N + NL + ++
Sbjct: 74 CQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 133
Query: 392 SYNNLSGS 399
S+N LS +
Sbjct: 134 SHNGLSST 141
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 245 LNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSF 304
LNL HN + + + L + + N I P+ KL L+ L+L +N +
Sbjct: 35 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 94
Query: 305 PVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346
TF T+L L+L +N + + +NL L+L +N
Sbjct: 95 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 136
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 206 SLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGL 265
+L L +L+ L L N L S+PN GV +K L+ L L N + KL
Sbjct: 80 ALKELTNLTYLILTGNQLQ-SLPN--GVF--DKLTNLKELVLVENQLQSLPDGVFDKLTN 134
Query: 266 LQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLG 325
L ++L+HN++ KL+ L +LDLSYN + F +T L L L N+L
Sbjct: 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194
Query: 326 NKIPEGL-ERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLA 384
+ +P+G+ +RL +L + L +N + P GI L N +G + S S+A
Sbjct: 195 S-VPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNSAGSVA 246
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 284 LGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLN 342
L +L+ L L L+ N + F +T+L L L N+L +P+G+ ++L NLT LN
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLN 139
Query: 343 LKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPP 402
L +NQ + ++ + +LDLS N L L + Y N SVP
Sbjct: 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL-YQNQLKSVPD 198
Query: 403 LLSKKFNSSSFV 414
+ + S ++
Sbjct: 199 GVFDRLTSLQYI 210
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 18/240 (7%)
Query: 506 KAGTEVESGGEMGGK-----LVHFDGPFLFTADDLLCATAEIMGKSTYGTAYKAT-LEDG 559
K G E ES E K L ++ P TA + +G ++G E G
Sbjct: 2 KKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 61
Query: 560 SEVAVKRLREKTTKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616
+ A+K L ++ K+ E E + ++ P L+ L + +V +++
Sbjct: 62 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAG 120
Query: 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPR 676
G + F H R R A I YLH ++I+ +L N+L+D++ +
Sbjct: 121 GEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQ 176
Query: 677 IADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
+ DFG ++ + Y APE+ K N D ++LGV+I E+ G P
Sbjct: 177 VTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 27/224 (12%)
Query: 543 MGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEF-EAEAAAIGKIHHPNLLALRAYYL 601
+GK YG + G +VAVK TT+ F E E + H N+L A +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFF--TTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 602 GPKG---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE---- 654
G + L+ D+ GSL +L + T ++ + + +A GL +LH E
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 655 ---ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG---YRAPE- 707
+ H +L S N+L+ + IAD GL+ +G Y PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 708 LSKLKNAN-----TKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746
L + N N D+YS G+I+ E+ G + LP
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 543 MGKSTYGTAYK-ATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ ++G ++ + G + AVK++R + + + E A + P ++ L Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPL--YGA 132
Query: 602 GPKGEKLLVF-DFMPKGSLASFLHARG--PETIVNWATRMSIAIGIA-RGLNYLHVEENM 657
+G + +F + + GSL + G PE R +G A GL YLH +
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLPED------RALYYLGQALEGLEYLHTR-RI 185
Query: 658 IHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKLK 712
+HG++ + NVLL + + + DFG + + + + APE+ K
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 713 NANTKTDVYSLGVIILELLTGKSP 736
+ K D++S ++L +L G P
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 243 QFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIP-DELGKLSKLQKLDLSYNAIG 301
Q L L N I P L L+E+ L N++ G +P L++L LDL N +
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 302 GSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKG 350
F + L L + N+L ++P G+ERL +LT L L NQ K
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLKS 149
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 120 LSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSI-GNCPNLQTLDLSNNALIGA 178
L LHDN + P L NL+ +YL +N+L G++P + + L LDL N L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-V 102
Query: 179 IPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPN 229
+P ++ + +P + RL L+ LAL N L S+P+
Sbjct: 103 LPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK-SIPH 152
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 291 QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKNNQFK 349
Q L L N I P F ++ +L L L +N+LG +P G+ + L LTVL+L NQ
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 350 GHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
+ + +L + N T E+ + L +LT + N L S+P
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIP 151
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668
LVF+ M GS+ S +H R N + +A L++LH + + H +L N+L
Sbjct: 88 LVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLH-NKGIAHRDLKPENIL 143
Query: 669 LDE--KTNP-RIADFGLSRLMXXXXXXXXXXXXXXLG------YRAPELSKLKNA----- 714
+ + +P +I DFGL + L Y APE+ + +
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 715 NTKTDVYSLGVIILELLTGKSP 736
+ + D++SLGVI+ LL+G P
Sbjct: 204 DKRCDLWSLGVILYILLSGYPP 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+GVI+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 543 MGKSTYGTAYK-ATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ ++G ++ + G + AVK++R + + + E A + P ++ L Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPL--YGA 118
Query: 602 GPKGEKLLVF-DFMPKGSLASFLHARG--PETIVNWATRMSIAIGIA-RGLNYLHVEENM 657
+G + +F + + GSL + G PE R +G A GL YLH +
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPED------RALYYLGQALEGLEYLHTR-RI 171
Query: 658 IHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKLK 712
+HG++ + NVLL + + + DFG + + + + APE+ K
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 713 NANTKTDVYSLGVIILELLTGKSP 736
+ K D++S ++L +L G P
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+GVI+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 543 MGKSTYGTAYK-ATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601
+G+ ++G ++ + G + AVK++R + + + E A + P ++ L Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPL--YGA 134
Query: 602 GPKGEKLLVF-DFMPKGSLASFLHARG--PETIVNWATRMSIAIGIA-RGLNYLHVEENM 657
+G + +F + + GSL + G PE R +G A GL YLH +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPED------RALYYLGQALEGLEYLHTR-RI 187
Query: 658 IHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXL----GYRAPELSKLK 712
+HG++ + NVLL + + + DFG + + + + APE+ K
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 713 NANTKTDVYSLGVIILELLTGKSP 736
+ K D++S ++L +L G P
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG--- 702
R + LH N+IH +L SN+L++ + ++ DFGL+R++ G
Sbjct: 123 RAVKVLH-GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 703 ------YRAPELSKLKNANTKT-DVYSLGVIILELL 731
YRAPE+ ++ DV+S G I+ EL
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG--- 702
R + LH N+IH +L SN+L++ + ++ DFGL+R++ G
Sbjct: 123 RAVKVLH-GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 703 ------YRAPELSKLKNANTKT-DVYSLGVIILELL 731
YRAPE+ ++ DV+S G I+ EL
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 646 RGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLG--- 702
R + LH N+IH +L SN+L++ + ++ DFGL+R++ G
Sbjct: 123 RAVKVLH-GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 703 ------YRAPELSKLKNANTKT-DVYSLGVIILELL 731
YRAPE+ ++ DV+S G I+ EL
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 209 RLPSLSVLALQHNNLS---GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGL 265
+L L+ L+L N LS +++G + L++L+L N G I +S LGL
Sbjct: 50 KLTQLTKLSLSSNGLSFKGCCSQSDFGTTS------LKYLDLSFN---GVITMSSNFLGL 100
Query: 266 --LQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLEN 321
L+ + H+ K + L L L LD+S+ +F F ++SL L +
Sbjct: 101 EQLEHLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159
Query: 322 NRLG-NKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDF 372
N N +P+ L+NLT L+L Q + P ++S + L++S N+F
Sbjct: 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 23/115 (20%)
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXX-------- 690
+I + G N++H E +IH +L +N LL++ + ++ DFGL+R +
Sbjct: 133 TILYNLLLGENFIH-ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
Query: 691 -------------XXXXXXXXXXLGYRAPELSKLKNANTKT-DVYSLGVIILELL 731
YRAPEL L+ TK+ D++S G I ELL
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 234 LAGNKSYQLQFL----NLDHNLIAGTIPVSL-----GKLGLLQEISLSHNKIVGPIPD-E 283
L GNK + + L NL + ++ G SL KL L+E+ L N++ +PD
Sbjct: 70 LGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGV 128
Query: 284 LGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLN 342
KL+ L L L +N + F +T+L L+L+NN+L +PEG+ ++L L L+
Sbjct: 129 FDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQL-QSLPEGVFDKLTQLKQLS 187
Query: 343 LKNNQFKGHIPETI 356
L +NQ K +P+ +
Sbjct: 188 LNDNQLKS-VPDGV 200
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 284 LGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLN 342
KL+ L++L L N + F +T+L L L +N+L +P+G+ ++L NLT L+
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQL-QSLPKGVFDKLTNLTRLD 163
Query: 343 LKNNQFKGHIPETI-GNISGINQLDLSEN 370
L NNQ + +PE + ++ + QL L++N
Sbjct: 164 LDNNQLQS-LPEGVFDKLTQLKQLSLNDN 191
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 206 SLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGL 265
+L L +L+ L L N L S+PN GV +K L+ L L N + KL
Sbjct: 80 ALKELTNLTYLILTGNQLQ-SLPN--GVF--DKLTNLKELVLVENQLQSLPDGVFDKLTN 134
Query: 266 LQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLG 325
L + L HN++ KL+ L +LDL N + F +T L L+L +N+L
Sbjct: 135 LTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK 194
Query: 326 NKIPEGL-ERLQNLTVLNLKNN 346
+ +P+G+ +RL +LT + L NN
Sbjct: 195 S-VPDGVFDRLTSLTHIWLLNN 215
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 284 LGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLN 342
L +L+ L L L+ N + F +T+L L L N+L +P+G+ ++L NLT L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLY 139
Query: 343 LKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
L +NQ + ++ + +LDL N L L +++ N L SVP
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVP 197
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 26/209 (12%)
Query: 550 TAYKATLEDGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG- 605
AY A LE VA+K+L + T ++ + E + ++H N++ L + K
Sbjct: 42 AAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 606 ----EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAI-GIARGLNYLHVEENMIHG 660
+ +V + M +L + RMS + + G+ +LH +IH
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQMELDHE------RMSYLLYQMLCGIKHLH-SAGIIHR 150
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L SN+++ +I DFGL+R YRAPE+ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDI 208
Query: 721 YSLGVIILELLTGKSPGEPMNGMD-LPQW 748
+S+G I+ E++ G G G D + QW
Sbjct: 209 WSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 542 IMGKSTYGTAYKA-TLEDGSEVAVKRLREKTTKGQKEFEA------EAAAIGKIH----H 590
++GK +GT + L D +VA+K + G E A + K+ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 591 PNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNY 650
P ++ L ++ +G L++ +P L ++ +GP + +R +A + +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFGQVVA-AIQH 154
Query: 651 LHVEENMIHGNLTSSNVLLD-EKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPE-L 708
H ++H ++ N+L+D + ++ DFG L+ Y PE +
Sbjct: 155 CH-SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV---YSPPEWI 210
Query: 709 SKLKNANTKTDVYSLGVIILELLTGKSPGE 738
S+ + V+SLG+++ +++ G P E
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 139 GIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 195
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 235
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 140 GIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YRAP 196
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTG 733
E+ D++S+G I+ E++ G
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 86
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 87 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 144
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 145 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 201
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 202 YDKSCDMWSLGVIMYILLCGYPP 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 287 LSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKN 345
L+KL L+L YN + F ++T L +L L NN+L + +P G+ + L L L L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 346 NQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
NQ K ++ + +L L+ N + + L NL + ++S N L SVP
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI 300
+L +LNLD+N + L L + L++N++ L++L KL L N +
Sbjct: 60 KLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL 119
Query: 301 GGSFPVTFTNITSLVSLNLENNRLGNKIPEG-LERLQNLTVLNLKNNQFKGHIP----ET 355
F +T L L L N+L IP G ++L NL L+L NQ + +P +
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDR 177
Query: 356 IGNISGI----NQLDLS 368
+G + I NQ D S
Sbjct: 178 LGKLQTITLFGNQFDCS 194
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Query: 291 QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKG 350
+KLDL + TF +T L LNL+ N+L + L L L L NNQ
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 351 HIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
+++ +++L L N S L L ++ N L S+P
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP 147
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 94
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 95 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 152
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 153 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 209
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 210 YDKSCDMWSLGVIMYILLCGYPP 232
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE--KTNPRIADFGLSRLMXXXXXXXXXX 696
A I + L+ LH + +IH +L N+LL + ++ ++ DFG S
Sbjct: 204 KFAHSILQCLDALH-KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYT 258
Query: 697 XXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS--PGE 738
YRAPE+ D++SLG I+ ELLTG PGE
Sbjct: 259 XIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 280 IPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLT 339
+P EL L +DLS N I +F+N+T L++L L NRL P + L++L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 340 VLNLKNNQFKGHIPE-TIGNISGINQLDLSEN 370
+L+L N +PE ++S ++ L + N
Sbjct: 106 LLSLHGNDI-SVVPEGAFNDLSALSHLAIGAN 136
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 301 GGSFPVTFTNITSLVSLNLENNRLGNK----IPEGLERLQNLTVLNLKNNQFKGHIPETI 356
G P T + ++V R NK +P+G+ R ++T L L NQF +P+ +
Sbjct: 1 GSRCPTECTCLDTVV-------RCSNKGLKVLPKGIPR--DVTELYLDGNQFT-LVPKEL 50
Query: 357 GNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPP 402
N + +DLS N + + S +++ L + +SYN L +PP
Sbjct: 51 SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPP 95
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 256 IPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLV 315
+P L L I LS+N+I +++L L LSYN + P TF + SL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 316 SLNLENNRLGNKIPEG 331
L+L N + + +PEG
Sbjct: 106 LLSLHGNDI-SVVPEG 120
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE--KTNPRIADFGLSRLMXXXXXXXXXX 696
A I + L+ LH + +IH +L N+LL + ++ ++ DFG S
Sbjct: 204 KFAHSILQCLDALH-KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYT 258
Query: 697 XXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS--PGE 738
YRAPE+ D++SLG I+ ELLTG PGE
Sbjct: 259 XIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 85
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 86 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 143
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 144 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 200
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 201 YDKSCDMWSLGVIMYILLCGYPP 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 287 LSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNLTVLNLKN 345
L+KL L+L YN + F ++T L +L L NN+L + +P G+ + L L L L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 346 NQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
NQ K ++ + +L L+ N + + L NL + ++S N L SVP
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI 300
+L +LNLD+N + L L + L++N++ L++L KL L N +
Sbjct: 60 KLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL 119
Query: 301 GGSFPVTFTNITSLVSLNLENNRLGNKIPEG-LERLQNLTVLNLKNNQFKGHIP----ET 355
F +T L L L N+L IP G ++L NL L+L NQ + +P +
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDR 177
Query: 356 IGNISGI----NQLDLS 368
+G + I NQ D S
Sbjct: 178 LGKLQTITLFGNQFDCS 194
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Query: 291 QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKG 350
+KLDL + TF +T L LNL+ N+L + L L L L NNQ
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 351 HIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401
+++ +++L L N S L L ++ N L S+P
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP 147
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 84
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 85 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 142
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 143 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 199
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 200 YDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 201 GSIPLSLTRLPSLSVLALQHNNLS---GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP 257
G S LPSL L L N LS +++G + L++L+L N G I
Sbjct: 337 GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTS------LKYLDLSFN---GVIT 387
Query: 258 VSLGKLGL--LQEISLSHN--KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITS 313
+S LGL L+ + H+ K + L L L LD+S+ +F F ++S
Sbjct: 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS-LRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 314 LVSLNLENNRLG-NKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEN 370
L L + N N +P+ L+NLT L+L Q + P ++S + L+++ N
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 280 IPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL-ERLQNL 338
+PD +L L LDLS + P F +++SL LN+ +N+L + +P+G+ +RL +L
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSL 520
Query: 339 TVLNLKNNQFKGHIP 353
+ L N + P
Sbjct: 521 QKIWLHTNPWDCSCP 535
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 114 LHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNN 173
L +L L L DN L + +L LR ++L NN + + P+L+ LDL
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 174 ALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGV 233
+ I + IP +LT L L L L N L P ++
Sbjct: 142 KRLEYISEAAFEGLVNLRYLNLGMCNLKDIP-NLTALVRLEELELSGNRLDLIRPGSFQG 200
Query: 234 LAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKL 293
L L+ L L H +A + L L+E++LSHN ++ D L +L+++
Sbjct: 201 LTS-----LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERV 255
Query: 294 DLSYN 298
L++N
Sbjct: 256 HLNHN 260
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 7/146 (4%)
Query: 252 IAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNI 311
+ +IPV+ + ++L N I D L L+ L LS N + F +
Sbjct: 29 VPASIPVNT------RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGL 82
Query: 312 TSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEND 371
SL +L L +NRL + E L L L L+NN + + + +LDL E
Sbjct: 83 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 142
Query: 372 FTGEIS-PSLASLANLTSFNVSYNNL 396
IS + L NL N+ NL
Sbjct: 143 RLEYISEAAFEGLVNLRYLNLGMCNL 168
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI 300
L+ L L NL+ + L L + L N++ LSKL++L L N I
Sbjct: 60 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 119
Query: 301 GGSFPVTFTNITSLVSLNL-ENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNI 359
F + SL L+L E RL E L NL LNL K IP + +
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKD-IP-NLTAL 177
Query: 360 SGINQLDLSEN 370
+ +L+LS N
Sbjct: 178 VRLEELELSGN 188
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 79
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 80 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 137
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 138 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 194
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 195 YDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 78
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 136
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 137 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTEPCYTPY--YVAPEVLGPEK 193
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE--KTNPRIADFGLSRLMXXXXXXXXXX 696
A I + L+ LH + +IH +L N+LL + ++ ++ DFG S
Sbjct: 204 KFAHSILQCLDALH-KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYX 258
Query: 697 XXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKS--PGE 738
YRAPE+ D++SLG I+ ELLTG PGE
Sbjct: 259 XIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 78
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 136
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 137 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 193
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 638 MSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXX 697
+ I I IA + +LH + ++H +L SN+ ++ DFGL M
Sbjct: 167 LHIFIQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 698 XX--------XLG---YRAPELSKLKNANTKTDVYSLGVIILELL 731
+G Y +PE N + K D++SLG+I+ ELL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 647 GLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAP 706
G+ +LH +IH +L SN+++ +I DFGL+R YRAP
Sbjct: 138 GIKHLH-SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAP 194
Query: 707 ELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD-LPQW 748
E+ D++S+G I+ E++ G G G D + QW
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDHIDQW 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 702 GYRAPE-LSKLKNANTKTDVYSLGVIILELLTGKSP 736
G+RAPE L+K N T D++S GVI L LL+G+ P
Sbjct: 211 GFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 577 EFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASF-----LHARGPETI 631
+F+ E I I + L + E +++++M S+ F + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 632 VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686
+ I + +Y+H E+N+ H ++ SN+L+D+ +++DFG S M
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 80
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 138
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 139 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 195
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 552 YKATLEDGSEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLL 609
YK T G V V+R+ E + F + K+ +HPN++ RA ++ E +
Sbjct: 32 YKPT---GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 87
Query: 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAI---GIARGLNYLHVEENMIHGNLTSSN 666
V FM GS + ++ ++IA G+ + L+Y+H +H ++ +S+
Sbjct: 88 VTSFMAYGSAKDLICTH----FMDGMNELAIAYILQGVLKALDYIH-HMGYVHRSVKASH 142
Query: 667 VLLDE---------KTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL--SKLKNAN 715
+L+ ++N + G + + L + +PE+ L+ +
Sbjct: 143 ILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV---LPWLSPEVLQQNLQGYD 199
Query: 716 TKTDVYSLGVIILELLTGKSPGEPM 740
K+D+YS+G+ EL G P + M
Sbjct: 200 AKSDIYSVGITACELANGHVPFKDM 224
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 130
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 131 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 188
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 189 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 245
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 246 YDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 552 YKATLEDGSEVAVKRLR-EKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLL 609
YK T G V V+R+ E + F + K+ +HPN++ RA ++ E +
Sbjct: 48 YKPT---GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 103
Query: 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAI---GIARGLNYLHVEENMIHGNLTSSN 666
V FM GS + ++ ++IA G+ + L+Y+H +H ++ +S+
Sbjct: 104 VTSFMAYGSAKDLICTH----FMDGMNELAIAYILQGVLKALDYIH-HMGYVHRSVKASH 158
Query: 667 VLLDE---------KTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPEL--SKLKNAN 715
+L+ ++N + G + + L + +PE+ L+ +
Sbjct: 159 ILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV---LPWLSPEVLQQNLQGYD 215
Query: 716 TKTDVYSLGVIILELLTGKSPGEPM 740
K+D+YS+G+ EL G P + M
Sbjct: 216 AKSDIYSVGITACELANGHVPFKDM 240
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 8/186 (4%)
Query: 114 LHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPP-SIGNCPNLQTLDLSN 172
L +L L L DN L + +L LR ++L NN + SIP + P+L+ LDL
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGE 140
Query: 173 NALIGAIPPSLANSTXXXXXXXXXXXXXGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWG 232
+ I + IP +LT L L L L N L P ++
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP-NLTALVRLEELELSGNRLDLIRPGSFQ 199
Query: 233 VLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQK 292
L L+ L L H +A + L L+E++LSHN ++ D L +L++
Sbjct: 200 GLTS-----LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLER 254
Query: 293 LDLSYN 298
+ L++N
Sbjct: 255 VHLNHN 260
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 7/146 (4%)
Query: 252 IAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNI 311
+ +IPV+ + ++L N I D L L+ L LS N + F +
Sbjct: 29 VPASIPVNT------RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGL 82
Query: 312 TSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEND 371
SL +L L +NRL + E L L L L+NN + + + +LDL E
Sbjct: 83 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 142
Query: 372 FTGEIS-PSLASLANLTSFNVSYNNL 396
IS + L NL N+ NL
Sbjct: 143 RLEYISEAAFEGLVNLRYLNLGMCNL 168
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI 300
L+ L L NL+ + L L + L N++ LSKL++L L N I
Sbjct: 60 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 119
Query: 301 GGSFPVTFTNITSLVSLNL-ENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNI 359
F + SL L+L E RL E L NL LNL K IP + +
Sbjct: 120 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKD-IPN-LTAL 177
Query: 360 SGINQLDLSEN 370
+ +L+LS N
Sbjct: 178 VRLEELELSGN 188
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 80
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 138
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 139 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 195
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 9/203 (4%)
Query: 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALR 597
T++++G G + + E ++ + K ++E E A H ++ +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY 124
Query: 598 AYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
+ L+V + + G L S + RG + I I + YLH N+
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH-SINI 182
Query: 658 IHGNLTSSNVLLDEKTNP----RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKN 713
H ++ N+L K P ++ DFG ++ Y APE+ +
Sbjct: 183 AHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPCYTPY--YVAPEVLGPEK 239
Query: 714 ANTKTDVYSLGVIILELLTGKSP 736
+ D++SLGVI+ LL G P
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 9/160 (5%)
Query: 579 EAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKG-SLASFLHARGPETIVNWATR 637
+ EA G++ P+++ + + G +L V + G LA+ L +GP A
Sbjct: 82 QREARTAGRLQEPHVVPIHDF--GEIDGQLYVDXRLINGVDLAAXLRRQGP-----LAPP 134
Query: 638 MSIAIGIARG-LNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXX 696
++AI G H ++ N+L+ + DFG++
Sbjct: 135 RAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN 194
Query: 697 XXXXLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736
L Y APE +A + D+Y+L ++ E LTG P
Sbjct: 195 TVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPP 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 551 AYKATLEDGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG-- 605
AY A L+ VA+K+L + T ++ + E + ++H N+++L + K
Sbjct: 81 AYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLE 137
Query: 606 ---EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAI-GIARGLNYLHVEENMIHGN 661
+ LV + M +L + RMS + + G+ +LH +IH +
Sbjct: 138 EFQDVYLVMELM-DANLCQVIQMELDHE------RMSYLLYQMLCGIKHLH-SAGIIHRD 189
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L SN+++ +I DFGL+R YRAPE+ D++
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIW 247
Query: 722 SLGVIILELLTGK 734
S+G I+ E++ K
Sbjct: 248 SVGCIMGEMVRHK 260
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 77/204 (37%), Gaps = 6/204 (2%)
Query: 144 VYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTXXXXXXXXXXXXXGSI 203
++L NR+S S +C NL L L +NAL G + T +
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 204 -PLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGK 262
P + L L L L L P + LA LQ+L L N + +
Sbjct: 96 DPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAA-----LQYLYLQDNNLQALPDNTFRD 150
Query: 263 LGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENN 322
LG L + L N+I L L +L L N + P F ++ L++L L N
Sbjct: 151 LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Query: 323 RLGNKIPEGLERLQNLTVLNLKNN 346
L E L L++L L L +N
Sbjct: 211 NLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 319 LENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISP 378
L NR+ + +NLT+L L +N G ++ + QLDLS+N + P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 379 S 379
+
Sbjct: 98 T 98
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 576 KEFEAEAAAIGKIHHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVNW 634
+EFE + K++H N++ L A K+L+ +F P GSL + L +
Sbjct: 56 REFEV----LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 635 ATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL----DEKTNPRIADFGLSRLMXXXX 690
+ + + + G+N+L E ++H N+ N++ D ++ ++ DFG +R +
Sbjct: 112 SEFLIVLRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 691 XXXXXXXXXXLGYRAPELSKL--------KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742
Y P++ + K D++S+GV TG P P G
Sbjct: 171 QFVXLYGTEE--YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 550 TAYKATLEDGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG- 605
AY A LE VA+K+L + T ++ + E + ++H N++ L + K
Sbjct: 42 AAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 606 ----EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAI-GIARGLNYLHVEENMIHG 660
+ +V + M +L + RMS + + G+ +LH +IH
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQMELDHE------RMSYLLYQMLCGIKHLH-SAGIIHR 150
Query: 661 NLTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDV 720
+L SN+++ +I DFGL+R YRAPE+ D+
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILGMGYKENVDI 208
Query: 721 YSLGVIILELLTGK 734
+S+G I+ E++ K
Sbjct: 209 WSVGCIMGEMVCHK 222
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 602 GPKG-EKLLVFDFMPKGSLA---SFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENM 657
GP G ++VF+ + + LA + H P V I+ + GL+Y+H +
Sbjct: 99 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK-----QISKQLLLGLDYMHRRCGI 153
Query: 658 IHGNLTSSNVLLDEKTNP------RIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKL 711
IH ++ NVL++ +P +IAD G + YR+PE+
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE----YRSPEVLLG 209
Query: 712 KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742
D++S +I EL+TG EP G
Sbjct: 210 APWGCGADIWSTACLIFELITGDFLFEPDEG 240
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 551 AYKATLEDGSEVAVKRLR---EKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK--- 604
AY A L+ VA+K+L + T ++ + E + ++H N+++L + K
Sbjct: 43 AYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLE 99
Query: 605 --GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAI-GIARGLNYLHVEENMIHGN 661
+ LV + M +L + RMS + + G+ +LH +IH +
Sbjct: 100 EFQDVYLVMELM-DANLCQVIQMELDHE------RMSYLLYQMLCGIKHLH-SAGIIHRD 151
Query: 662 LTSSNVLLDEKTNPRIADFGLSRLMXXXXXXXXXXXXXXLGYRAPELSKLKNANTKTDVY 721
L SN+++ +I DFGL+R YRAPE+ D++
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIW 209
Query: 722 SLGVIILELLTGK 734
S+G I+ E++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 576 KEFEAEAAAIGKIHHPNLLALRAYYLGPKGE-KLLVFDFMPKGSLASFLHARGPETIVNW 634
+EFE + K++H N++ L A K+L+ +F P GSL + L +
Sbjct: 56 REFEV----LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111
Query: 635 ATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL----DEKTNPRIADFGLSRLMXXXX 690
+ + + + G+N+L E ++H N+ N++ D ++ ++ DFG +R +
Sbjct: 112 SEFLIVLRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 691 XXXXXXXXXXLGYRAPELSKL--------KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742
Y P++ + K D++S+GV TG P P G
Sbjct: 171 QFVSLYGTEE--YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,353,726
Number of Sequences: 62578
Number of extensions: 861049
Number of successful extensions: 4836
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 493
Number of HSP's that attempted gapping in prelim test: 2517
Number of HSP's gapped (non-prelim): 1477
length of query: 773
length of database: 14,973,337
effective HSP length: 106
effective length of query: 667
effective length of database: 8,340,069
effective search space: 5562826023
effective search space used: 5562826023
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)