Query 041878
Match_columns 773
No_of_seqs 767 out of 5624
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 20:06:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.1E-47 2.4E-51 449.8 21.0 344 46-403 9-387 (768)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-46 3.8E-51 392.7 15.1 203 538-742 16-236 (299)
3 4aoj_A High affinity nerve gro 100.0 2.5E-46 8.4E-51 395.6 15.8 203 538-742 44-266 (329)
4 3rgz_A Protein brassinosteroid 100.0 1.1E-45 3.9E-50 439.4 21.5 334 93-432 345-752 (768)
5 4gt4_A Tyrosine-protein kinase 100.0 6.1E-46 2.1E-50 388.9 15.9 202 539-742 30-253 (308)
6 4ecn_A Leucine-rich repeat pro 100.0 6.7E-45 2.3E-49 429.9 24.9 351 44-405 264-803 (876)
7 4fih_A Serine/threonine-protei 100.0 1.2E-45 4.2E-50 389.4 15.6 197 538-741 77-274 (346)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-45 4.4E-50 383.4 15.0 213 537-757 34-251 (311)
9 1ogq_A PGIP-2, polygalacturona 100.0 7.1E-45 2.4E-49 385.5 20.9 293 45-371 2-302 (313)
10 3omv_A RAF proto-oncogene seri 100.0 1.4E-45 4.7E-50 384.4 14.9 197 538-741 39-241 (307)
11 4b9d_A Serine/threonine-protei 100.0 3.9E-45 1.3E-49 386.2 16.4 214 537-757 26-242 (350)
12 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-44 3.9E-49 380.9 17.6 200 538-747 61-266 (336)
13 4fie_A Serine/threonine-protei 100.0 1.3E-44 4.5E-49 390.9 16.9 198 537-741 153-351 (423)
14 3fpq_A Serine/threonine-protei 100.0 8.6E-44 2.9E-48 368.1 22.0 194 539-740 30-232 (290)
15 4eco_A Uncharacterized protein 100.0 3.6E-44 1.2E-48 416.9 19.9 315 46-373 27-470 (636)
16 3hyh_A Carbon catabolite-derep 100.0 1E-43 3.5E-48 364.2 19.0 210 537-757 15-229 (275)
17 3ubd_A Ribosomal protein S6 ki 100.0 7.1E-45 2.4E-49 378.0 10.0 211 537-756 26-242 (304)
18 4ase_A Vascular endothelial gr 100.0 1.5E-43 5.1E-48 377.3 14.7 205 536-741 65-292 (353)
19 3hmm_A TGF-beta receptor type- 100.0 4.4E-43 1.5E-47 368.2 14.9 195 538-739 6-220 (303)
20 4g31_A Eukaryotic translation 100.0 1.7E-42 5.7E-47 361.9 17.5 199 537-739 7-229 (299)
21 3v47_A TOLL-like receptor 5B a 100.0 2.9E-40 1E-44 369.8 20.4 325 77-401 6-412 (455)
22 4b99_A Mitogen-activated prote 100.0 1.2E-40 4.2E-45 361.1 16.7 210 537-754 56-277 (398)
23 3v5w_A G-protein coupled recep 100.0 6.3E-40 2.1E-44 369.8 19.8 212 537-756 191-410 (689)
24 2id5_A Lingo-1, leucine rich r 100.0 3E-39 1E-43 363.8 22.5 339 82-425 12-362 (477)
25 4f9c_A Cell division cycle 7-r 100.0 1.3E-39 4.6E-44 349.3 17.1 194 537-740 23-250 (361)
26 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-38 4.7E-43 382.5 25.3 143 83-225 16-162 (844)
27 3uto_A Twitchin; kinase, muscl 100.0 4E-39 1.4E-43 366.6 16.5 211 537-756 159-372 (573)
28 3vq2_A TLR4, TOLL-like recepto 100.0 2E-37 6.8E-42 359.9 25.1 139 91-229 32-171 (606)
29 3v47_A TOLL-like receptor 5B a 100.0 2E-37 6.8E-42 346.8 20.5 332 77-423 2-412 (455)
30 4eco_A Uncharacterized protein 100.0 9E-38 3.1E-42 363.1 18.3 302 91-404 206-562 (636)
31 2id5_A Lingo-1, leucine rich r 100.0 1.8E-36 6.3E-41 341.0 24.6 330 85-423 6-337 (477)
32 3oja_B Anopheles plasmodium-re 100.0 1E-36 3.5E-41 352.2 21.6 313 92-422 52-383 (597)
33 3o6n_A APL1; leucine-rich repe 100.0 1.4E-36 4.7E-41 332.7 21.1 286 92-397 46-331 (390)
34 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-36 4.5E-41 348.6 20.3 163 92-254 27-210 (549)
35 3zgw_A Maternal embryonic leuc 100.0 4.7E-37 1.6E-41 329.0 15.5 212 537-756 12-226 (347)
36 3fe3_A MAP/microtubule affinit 100.0 1.5E-36 5E-41 323.4 18.5 198 537-741 17-218 (328)
37 3fxz_A Serine/threonine-protei 100.0 1.6E-36 5.3E-41 319.1 17.6 198 537-741 22-220 (297)
38 3t6q_A CD180 antigen; protein- 100.0 9.6E-36 3.3E-40 345.7 25.7 304 92-402 255-565 (606)
39 3t6q_A CD180 antigen; protein- 100.0 9.3E-36 3.2E-40 345.8 24.7 311 91-402 33-418 (606)
40 4aw2_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 338.4 13.2 201 537-741 76-285 (437)
41 1o6l_A RAC-beta serine/threoni 100.0 2.6E-36 9E-41 322.3 18.3 198 538-741 8-209 (337)
42 4eqm_A Protein kinase; transfe 100.0 3.5E-36 1.2E-40 316.1 18.6 200 537-741 13-216 (294)
43 3v8s_A RHO-associated protein 100.0 6.1E-37 2.1E-41 335.1 12.8 198 538-741 72-277 (410)
44 2z7x_B TOLL-like receptor 1, v 100.0 8E-36 2.7E-40 339.7 21.9 321 91-421 21-483 (520)
45 2z63_A TOLL-like receptor 4, v 100.0 7.9E-36 2.7E-40 343.8 21.9 163 259-422 368-534 (570)
46 3p86_A Serine/threonine-protei 100.0 1.3E-36 4.6E-41 321.4 14.2 201 537-741 39-243 (309)
47 2qkw_B Protein kinase; three-h 100.0 3.8E-36 1.3E-40 320.1 17.8 203 538-742 42-246 (321)
48 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.4E-35 8.1E-40 338.8 25.1 325 91-423 52-514 (562)
49 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-36 5.8E-41 325.9 14.4 198 538-741 26-228 (353)
50 3s95_A LIMK-1, LIM domain kina 100.0 8.9E-36 3.1E-40 315.6 19.3 200 537-740 12-225 (310)
51 2vd5_A DMPK protein; serine/th 100.0 1.5E-36 5.2E-41 332.2 13.3 200 538-741 64-274 (412)
52 1fot_A TPK1 delta, CAMP-depend 100.0 6.2E-36 2.1E-40 317.1 17.6 195 538-741 9-207 (318)
53 2psq_A Fibroblast growth facto 100.0 4.7E-36 1.6E-40 325.3 17.0 207 536-744 82-313 (370)
54 2c30_A Serine/threonine-protei 100.0 8.6E-36 2.9E-40 317.1 18.6 197 538-741 48-245 (321)
55 4fr4_A YANK1, serine/threonine 100.0 9.6E-36 3.3E-40 322.7 19.3 209 537-752 17-232 (384)
56 2yab_A Death-associated protei 100.0 7.1E-36 2.4E-40 321.9 17.9 198 537-741 14-222 (361)
57 1xjd_A Protein kinase C, theta 100.0 5E-36 1.7E-40 321.1 16.4 198 538-741 20-222 (345)
58 1ziw_A TOLL-like receptor 3; i 100.0 8.1E-35 2.8E-39 342.6 28.0 328 92-424 249-627 (680)
59 4hcu_A Tyrosine-protein kinase 100.0 4.1E-36 1.4E-40 311.4 14.1 200 537-741 12-212 (269)
60 3vq2_A TLR4, TOLL-like recepto 100.0 9.1E-35 3.1E-39 337.5 27.0 327 91-424 56-563 (606)
61 3uim_A Brassinosteroid insensi 100.0 2.9E-36 1E-40 321.8 13.2 200 537-738 32-236 (326)
62 4dc2_A Protein kinase C IOTA t 100.0 1E-35 3.6E-40 323.5 17.1 198 537-740 54-256 (396)
63 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-35 4.1E-40 319.1 16.5 195 538-741 44-242 (350)
64 3niz_A Rhodanese family protei 100.0 3.2E-35 1.1E-39 311.2 19.5 210 538-753 24-236 (311)
65 2i0e_A Protein kinase C-beta I 100.0 1.2E-35 3.9E-40 319.3 16.2 198 538-741 23-225 (353)
66 4euu_A Serine/threonine-protei 100.0 2.1E-35 7.3E-40 314.0 18.1 217 538-757 12-244 (319)
67 2bdw_A Hypothetical protein K1 100.0 2E-35 6.8E-40 319.3 17.9 199 536-741 30-234 (362)
68 3kul_A Ephrin type-A receptor 100.0 7.1E-36 2.4E-40 318.3 14.2 204 535-742 49-260 (325)
69 4g8a_A TOLL-like receptor 4; l 100.0 8E-35 2.7E-39 339.7 24.4 333 91-423 52-584 (635)
70 2y0a_A Death-associated protei 100.0 2.9E-35 9.8E-40 313.7 18.8 199 536-741 12-221 (326)
71 3a62_A Ribosomal protein S6 ki 100.0 1.5E-35 5E-40 316.2 16.5 199 537-741 19-225 (327)
72 4fcg_A Uncharacterized protein 100.0 1.3E-35 4.6E-40 316.1 16.1 279 44-349 22-314 (328)
73 1tki_A Titin; serine kinase, m 100.0 1.2E-35 4.3E-40 315.6 15.8 208 538-755 8-218 (321)
74 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.3E-36 3.2E-40 323.0 15.0 199 536-739 66-287 (365)
75 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-35 3.7E-40 308.0 14.7 200 537-741 10-210 (268)
76 3a8x_A Protein kinase C IOTA t 100.0 3E-35 1E-39 315.5 18.0 197 537-739 11-212 (345)
77 1kob_A Twitchin; kinase, intra 100.0 2.9E-35 9.9E-40 320.0 17.4 199 537-741 53-254 (387)
78 2izr_A Casein kinase I isoform 100.0 3.4E-35 1.2E-39 314.0 17.3 210 538-754 12-234 (330)
79 1k9a_A Carboxyl-terminal SRC k 100.0 3.7E-35 1.3E-39 326.8 18.1 202 537-747 195-397 (450)
80 1qcf_A Haematopoetic cell kina 100.0 8E-36 2.7E-40 332.7 12.8 200 537-741 190-390 (454)
81 3gen_A Tyrosine-protein kinase 100.0 1.5E-35 5E-40 309.6 14.0 201 536-741 25-226 (283)
82 2acx_A G protein-coupled recep 100.0 4.7E-35 1.6E-39 330.1 18.7 208 538-750 187-398 (576)
83 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-35 1.1E-39 313.5 16.5 196 537-740 11-211 (336)
84 3qd2_B Eukaryotic translation 100.0 4.5E-35 1.5E-39 313.2 17.6 200 537-737 8-276 (332)
85 3soc_A Activin receptor type-2 100.0 1.4E-35 4.7E-40 315.8 13.5 199 537-742 26-243 (322)
86 3soa_A Calcium/calmodulin-depe 100.0 4.3E-35 1.5E-39 324.1 17.8 200 536-741 12-217 (444)
87 2x4f_A Myosin light chain kina 100.0 3.5E-35 1.2E-39 318.6 16.7 208 540-756 94-304 (373)
88 1ogq_A PGIP-2, polygalacturona 100.0 1E-35 3.6E-40 315.0 12.0 256 115-425 50-310 (313)
89 1ziw_A TOLL-like receptor 3; i 100.0 1.7E-34 5.9E-39 339.7 23.7 306 91-399 25-368 (680)
90 3c0i_A Peripheral plasma membr 100.0 7.1E-35 2.4E-39 314.0 18.6 202 536-740 25-236 (351)
91 2qol_A Ephrin receptor; recept 100.0 1.9E-35 6.4E-40 320.9 13.8 202 536-741 46-255 (373)
92 2r5t_A Serine/threonine-protei 100.0 2.4E-35 8.1E-40 319.1 14.6 199 537-741 40-243 (373)
93 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-34 4.2E-39 307.7 19.7 206 537-746 7-218 (317)
94 3cbl_A C-FES, proto-oncogene t 100.0 6.8E-36 2.3E-40 325.2 10.0 201 537-741 116-320 (377)
95 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-34 4.1E-39 326.1 20.0 201 539-742 189-394 (543)
96 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-35 6.3E-40 333.0 13.4 205 537-745 222-428 (495)
97 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-34 4.9E-39 329.4 20.6 302 91-402 45-486 (520)
98 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-34 4.8E-39 301.1 18.5 198 536-741 10-211 (277)
99 3j0a_A TOLL-like receptor 5; m 100.0 1.3E-34 4.5E-39 347.9 20.9 325 92-424 74-565 (844)
100 2z63_A TOLL-like receptor 4, v 100.0 2.8E-34 9.5E-39 330.9 22.4 162 241-403 374-537 (570)
101 3vhe_A Vascular endothelial gr 100.0 2.1E-35 7.3E-40 319.5 12.3 205 536-741 23-300 (359)
102 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-33 3.8E-38 302.5 25.4 285 95-395 37-331 (332)
103 3tki_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 312.3 13.9 200 538-742 10-213 (323)
104 3tt0_A Basic fibroblast growth 100.0 7E-35 2.4E-39 317.9 16.1 206 534-741 68-298 (382)
105 3kn6_A Ribosomal protein S6 ki 100.0 2E-34 6.9E-39 306.9 19.3 193 540-741 16-213 (325)
106 1ob3_A PFPK5, cell division co 100.0 7.2E-35 2.5E-39 305.2 15.4 199 538-742 5-206 (288)
107 3gni_B Strad alpha; kinase fol 100.0 1.4E-34 4.8E-39 316.6 18.3 208 534-744 24-244 (389)
108 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.9E-35 6.6E-40 329.3 11.4 200 537-741 186-386 (452)
109 3ork_A Serine/threonine protei 100.0 2.5E-35 8.6E-40 312.2 11.8 201 537-741 14-223 (311)
110 4ejn_A RAC-alpha serine/threon 100.0 3E-35 1E-39 327.7 12.8 199 537-741 150-353 (446)
111 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.8E-34 1.6E-38 327.9 23.1 303 91-403 76-516 (562)
112 3l9p_A Anaplastic lymphoma kin 100.0 3.3E-35 1.1E-39 318.5 12.4 203 537-741 73-291 (367)
113 1mp8_A Focal adhesion kinase 1 100.0 5.1E-35 1.8E-39 305.1 13.4 205 536-745 16-226 (281)
114 4ecn_A Leucine-rich repeat pro 100.0 2.5E-34 8.7E-39 339.7 20.8 315 91-418 491-839 (876)
115 3t9t_A Tyrosine-protein kinase 100.0 6.1E-35 2.1E-39 302.0 13.7 200 537-741 10-210 (267)
116 3uc3_A Serine/threonine-protei 100.0 1.7E-34 5.8E-39 312.0 17.5 210 537-754 22-236 (361)
117 1luf_A Muscle-specific tyrosin 100.0 5.8E-35 2E-39 314.0 13.6 203 537-741 49-281 (343)
118 3lb7_A RAF proto-oncogene seri 100.0 8.6E-35 2.9E-39 307.3 14.7 202 533-741 34-241 (307)
119 1xku_A Decorin; proteoglycan, 100.0 1.7E-33 5.7E-38 300.9 24.8 285 96-395 36-330 (330)
120 1vzo_A Ribosomal protein S6 ki 100.0 9.9E-35 3.4E-39 313.3 15.4 202 537-743 56-268 (355)
121 2zv2_A Calcium/calmodulin-depe 100.0 8.7E-35 3E-39 306.1 14.4 199 537-741 15-244 (298)
122 2nru_A Interleukin-1 receptor- 100.0 7.3E-34 2.5E-38 300.4 21.3 201 540-744 36-241 (307)
123 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-34 4.8E-39 311.3 16.0 196 537-741 55-254 (349)
124 2a2a_A Death-associated protei 100.0 2.5E-34 8.5E-39 306.1 17.6 199 536-741 13-222 (321)
125 3oz6_A Mitogen-activated prote 100.0 1.6E-34 5.6E-39 315.9 16.6 200 537-742 11-236 (388)
126 4eut_A Serine/threonine-protei 100.0 6.3E-35 2.2E-39 319.8 13.2 218 537-757 11-244 (396)
127 2y94_A 5'-AMP-activated protei 100.0 1.4E-34 4.8E-39 322.1 16.0 198 537-741 18-220 (476)
128 3ugc_A Tyrosine-protein kinase 100.0 5.1E-35 1.7E-39 307.4 11.8 201 536-739 11-219 (295)
129 3c1x_A Hepatocyte growth facto 100.0 5.8E-35 2E-39 316.6 12.4 208 536-746 90-306 (373)
130 3poz_A Epidermal growth factor 100.0 1.3E-34 4.6E-39 308.9 15.0 205 537-746 17-229 (327)
131 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-34 3.6E-39 307.9 13.7 208 536-745 24-261 (314)
132 3ttj_A Mitogen-activated prote 100.0 1.5E-34 5.1E-39 322.4 15.3 196 537-741 64-267 (464)
133 3o0g_A Cell division protein k 100.0 5.2E-34 1.8E-38 299.3 18.4 208 538-753 5-216 (292)
134 3hko_A Calcium/calmodulin-depe 100.0 1.3E-34 4.6E-39 311.4 14.3 204 536-741 27-280 (345)
135 3kfa_A Tyrosine-protein kinase 100.0 1.1E-34 3.7E-39 303.8 13.1 206 536-745 14-221 (288)
136 3g33_A Cell division protein k 100.0 4.2E-34 1.4E-38 302.4 17.6 203 537-744 11-226 (308)
137 3qup_A Tyrosine-protein kinase 100.0 1.7E-34 5.9E-39 307.6 14.7 207 536-743 24-246 (323)
138 3cc6_A Protein tyrosine kinase 100.0 2.2E-34 7.4E-39 300.4 14.8 204 537-745 14-223 (281)
139 1nxk_A MAP kinase-activated pr 100.0 4.8E-34 1.6E-38 312.6 18.3 195 541-744 68-270 (400)
140 3op5_A Serine/threonine-protei 100.0 1.4E-34 4.8E-39 313.6 13.8 200 537-740 37-264 (364)
141 2qr7_A Ribosomal protein S6 ki 100.0 2.8E-34 9.7E-39 307.6 15.9 210 537-756 24-239 (342)
142 1csn_A Casein kinase-1; phosph 100.0 9.3E-34 3.2E-38 298.2 19.6 209 537-752 12-233 (298)
143 3pfq_A PKC-B, PKC-beta, protei 100.0 2.7E-34 9.2E-39 334.2 17.0 199 537-741 343-546 (674)
144 2h8h_A Proto-oncogene tyrosine 100.0 4.4E-35 1.5E-39 332.9 10.2 200 537-741 269-469 (535)
145 3f66_A Hepatocyte growth facto 100.0 3.4E-34 1.2E-38 301.6 16.2 207 536-745 26-241 (298)
146 2ac3_A MAP kinase-interacting 100.0 7.3E-34 2.5E-38 301.8 18.8 198 540-742 18-231 (316)
147 2pvf_A Fibroblast growth facto 100.0 2.4E-34 8.2E-39 308.0 15.0 205 535-741 35-264 (334)
148 3kk8_A Calcium/calmodulin depe 100.0 6E-34 2.1E-38 297.5 17.4 197 538-741 9-211 (284)
149 1rjb_A FL cytokine receptor; k 100.0 3.1E-34 1.1E-38 308.5 15.6 206 535-742 45-280 (344)
150 2eva_A TAK1 kinase - TAB1 chim 100.0 3.7E-34 1.3E-38 302.6 15.9 194 537-741 10-207 (307)
151 1qpc_A LCK kinase; alpha beta 100.0 1.1E-34 3.9E-39 302.2 11.7 200 537-741 15-215 (279)
152 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-33 3.8E-38 299.5 19.3 197 535-739 57-257 (311)
153 3dls_A PAS domain-containing s 100.0 3.3E-34 1.1E-38 306.6 15.3 197 536-739 25-232 (335)
154 3is5_A Calcium-dependent prote 100.0 4.7E-34 1.6E-38 298.4 16.1 201 536-741 23-229 (285)
155 3bhy_A Death-associated protei 100.0 9.2E-34 3.1E-38 295.9 18.2 199 536-741 6-215 (283)
156 3q4u_A Activin receptor type-1 100.0 7.7E-34 2.6E-38 299.3 17.6 196 537-740 10-236 (301)
157 2eue_A Carbon catabolite derep 100.0 4.5E-34 1.6E-38 297.0 15.6 196 538-741 16-216 (275)
158 2h34_A Serine/threonine-protei 100.0 3.6E-34 1.2E-38 303.0 15.0 199 537-740 36-238 (309)
159 2jam_A Calcium/calmodulin-depe 100.0 5.3E-34 1.8E-38 301.1 16.2 198 536-741 10-211 (304)
160 1t46_A HOMO sapiens V-KIT hard 100.0 4.1E-34 1.4E-38 303.2 15.4 206 535-742 23-253 (313)
161 3llt_A Serine/threonine kinase 100.0 6.3E-34 2.2E-38 308.1 16.9 202 537-747 37-269 (360)
162 1u5q_A Serine/threonine protei 100.0 4.6E-34 1.6E-38 306.9 15.6 195 537-741 56-257 (348)
163 3fdn_A Serine/threonine-protei 100.0 5.8E-34 2E-38 296.8 15.9 197 537-741 11-211 (279)
164 4hgt_A Casein kinase I isoform 100.0 9.6E-34 3.3E-38 297.7 16.8 206 537-748 11-226 (296)
165 3kex_A Receptor tyrosine-prote 100.0 3.2E-34 1.1E-38 305.7 13.3 206 537-747 15-228 (325)
166 3cok_A Serine/threonine-protei 100.0 7.6E-34 2.6E-38 295.8 15.8 200 537-741 13-216 (278)
167 4agu_A Cyclin-dependent kinase 100.0 6.9E-34 2.3E-38 301.2 15.5 204 538-747 6-213 (311)
168 3dtc_A Mitogen-activated prote 100.0 4.7E-34 1.6E-38 296.1 13.9 195 537-741 9-218 (271)
169 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-33 4.5E-38 296.7 17.5 202 537-744 11-222 (296)
170 3pls_A Macrophage-stimulating 100.0 7.1E-34 2.4E-38 299.1 15.4 205 534-741 20-233 (298)
171 4f0f_A Serine/threonine-protei 100.0 1.9E-33 6.4E-38 294.2 18.5 197 537-743 21-234 (287)
172 3rp9_A Mitogen-activated prote 100.0 6.9E-34 2.4E-38 318.0 16.1 199 537-740 55-298 (458)
173 3dbq_A Dual specificity protei 100.0 5.9E-34 2E-38 306.0 15.0 196 537-739 11-222 (343)
174 2rku_A Serine/threonine-protei 100.0 1.6E-33 5.4E-38 295.9 17.8 198 538-741 18-219 (294)
175 3byv_A Rhoptry kinase; malaria 100.0 1.3E-34 4.3E-39 315.4 9.7 198 537-741 75-317 (377)
176 2owb_A Serine/threonine-protei 100.0 1.4E-33 4.7E-38 302.1 17.6 199 537-741 43-245 (335)
177 2ozo_A Tyrosine-protein kinase 100.0 5.7E-34 2E-38 328.4 15.6 198 542-744 343-547 (613)
178 3lij_A Calcium/calmodulin depe 100.0 1.1E-33 3.9E-38 319.0 17.5 199 536-742 38-242 (494)
179 3mtl_A Cell division protein k 100.0 2.9E-34 9.8E-39 305.9 11.9 208 538-751 5-215 (324)
180 3mwu_A Calmodulin-domain prote 100.0 1.1E-33 3.7E-38 318.7 17.1 198 536-741 23-226 (486)
181 2y7j_A Phosphorylase B kinase 100.0 1.4E-33 4.9E-38 305.3 17.3 198 537-741 96-309 (365)
182 3mi9_A Cell division protein k 100.0 1.3E-33 4.3E-38 304.6 16.7 210 537-750 19-242 (351)
183 3nyv_A Calmodulin-domain prote 100.0 7.3E-34 2.5E-38 320.1 15.4 199 536-742 27-232 (484)
184 3kmu_A ILK, integrin-linked ki 100.0 8.8E-34 3E-38 293.9 14.8 196 537-741 12-215 (271)
185 1cm8_A Phosphorylated MAP kina 100.0 8.5E-34 2.9E-38 307.3 15.3 195 537-741 27-230 (367)
186 2zmd_A Dual specificity protei 100.0 1.4E-33 4.8E-38 308.0 17.0 197 537-740 58-270 (390)
187 2xir_A Vascular endothelial gr 100.0 4.7E-34 1.6E-38 303.2 12.8 205 536-741 28-255 (316)
188 3n9x_A Phosphotransferase; mal 100.0 1.1E-33 3.9E-38 313.3 16.4 196 537-737 28-252 (432)
189 1u59_A Tyrosine-protein kinase 100.0 9.6E-34 3.3E-38 296.5 14.9 197 541-742 16-219 (287)
190 4fvq_A Tyrosine-protein kinase 100.0 4.7E-34 1.6E-38 299.1 12.6 192 537-737 10-218 (289)
191 3lzb_A Epidermal growth factor 100.0 9.9E-34 3.4E-38 302.0 14.9 205 537-746 17-229 (327)
192 4fl3_A Tyrosine-protein kinase 100.0 6.5E-34 2.2E-38 328.7 14.3 196 541-742 375-578 (635)
193 1byg_A CSK, protein (C-termina 100.0 4.7E-34 1.6E-38 297.3 11.8 198 537-743 23-221 (278)
194 3ll6_A Cyclin G-associated kin 100.0 8.1E-34 2.8E-38 304.1 13.8 203 536-740 29-256 (337)
195 2h6d_A 5'-AMP-activated protei 100.0 1.5E-33 5.1E-38 293.2 15.3 198 537-741 13-215 (276)
196 2yex_A Serine/threonine-protei 100.0 1.9E-33 6.5E-38 292.3 16.0 201 537-742 9-213 (276)
197 2vgo_A Serine/threonine-protei 100.0 2.2E-33 7.4E-38 293.3 16.4 197 537-741 16-216 (284)
198 1mqb_A Ephrin type-A receptor 100.0 1.4E-33 4.9E-38 301.6 15.3 201 537-741 46-255 (333)
199 3i6u_A CDS1, serine/threonine- 100.0 1.2E-33 4E-38 311.7 14.9 198 537-742 137-349 (419)
200 3qyz_A Mitogen-activated prote 100.0 2.5E-33 8.5E-38 303.7 17.2 208 537-750 29-245 (364)
201 3q5i_A Protein kinase; CDPK, m 100.0 2.6E-33 8.9E-38 316.9 18.0 198 537-742 38-252 (504)
202 3lxl_A Tyrosine-protein kinase 100.0 6.5E-34 2.2E-38 303.7 12.4 201 536-739 24-232 (327)
203 1p4o_A Insulin-like growth fac 100.0 4.5E-34 1.5E-38 304.3 10.8 204 536-741 26-245 (322)
204 4aaa_A Cyclin-dependent kinase 100.0 2.3E-33 7.9E-38 299.9 16.3 199 537-741 27-229 (331)
205 3a7i_A MST3 kinase, serine/thr 100.0 3.5E-33 1.2E-37 294.6 17.3 198 537-741 24-223 (303)
206 3eqc_A Dual specificity mitoge 100.0 7.3E-34 2.5E-38 307.6 12.3 198 537-742 35-235 (360)
207 4e5w_A Tyrosine-protein kinase 100.0 1.2E-33 4.1E-38 298.0 13.6 199 537-738 23-230 (302)
208 1t4h_A Serine/threonine-protei 100.0 8.9E-33 3E-37 289.6 20.0 195 538-740 29-232 (290)
209 4e7w_A Glycogen synthase kinas 100.0 1.2E-33 4.1E-38 309.1 13.9 199 537-742 42-247 (394)
210 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-33 6.1E-38 294.7 14.4 198 537-741 26-229 (289)
211 3brb_A Proto-oncogene tyrosine 100.0 2.4E-33 8.1E-38 297.4 15.3 209 535-744 34-257 (313)
212 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.8E-34 3.3E-38 302.4 12.4 199 537-742 36-243 (329)
213 3lm5_A Serine/threonine-protei 100.0 3.4E-33 1.2E-37 298.0 16.5 196 541-741 35-237 (327)
214 1j1b_A Glycogen synthase kinas 100.0 1.9E-33 6.3E-38 310.2 14.8 197 537-741 56-261 (420)
215 3q60_A ROP5B; pseudokinase, tr 100.0 1E-33 3.5E-38 307.6 12.6 196 537-740 64-296 (371)
216 3eb0_A Putative uncharacterize 100.0 2.4E-33 8.1E-38 306.0 15.4 198 537-742 9-247 (383)
217 2clq_A Mitogen-activated prote 100.0 3.7E-33 1.3E-37 293.1 16.2 198 540-740 27-228 (295)
218 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-33 7.6E-38 298.2 14.5 197 538-739 34-239 (318)
219 3sv0_A Casein kinase I-like; t 100.0 6.9E-33 2.4E-37 309.0 19.1 211 537-753 9-229 (483)
220 2xrw_A Mitogen-activated prote 100.0 2.6E-33 8.7E-38 304.3 15.1 196 537-741 27-230 (371)
221 2buj_A Serine/threonine-protei 100.0 3.7E-33 1.3E-37 296.4 16.1 202 537-739 31-248 (317)
222 3pg1_A Mitogen-activated prote 100.0 3.3E-33 1.1E-37 302.7 15.9 199 538-742 25-239 (362)
223 2w5a_A Serine/threonine-protei 100.0 8.2E-34 2.8E-38 295.6 10.7 203 537-741 8-220 (279)
224 2v62_A Serine/threonine-protei 100.0 1.4E-33 4.9E-38 303.2 12.9 198 537-739 39-262 (345)
225 1ua2_A CAK, cell division prot 100.0 2.6E-33 9E-38 301.3 15.0 200 536-741 11-217 (346)
226 2fst_X Mitogen-activated prote 100.0 1.3E-33 4.4E-38 305.6 12.5 196 537-742 31-235 (367)
227 1xbb_A Tyrosine-protein kinase 100.0 1.1E-33 3.9E-38 296.6 11.7 199 538-742 19-226 (291)
228 3o6n_A APL1; leucine-rich repe 100.0 1.5E-32 5E-37 300.7 21.0 324 68-416 3-328 (390)
229 2jii_A Serine/threonine-protei 100.0 8.6E-34 2.9E-38 306.0 11.0 197 537-741 44-272 (352)
230 3mdy_A Bone morphogenetic prot 100.0 2.3E-32 7.9E-37 292.9 21.7 196 536-740 38-265 (337)
231 3nsz_A CK II alpha, casein kin 100.0 1.4E-32 4.9E-37 293.7 20.0 192 536-739 37-233 (330)
232 2j7t_A Serine/threonine-protei 100.0 2.2E-33 7.4E-38 296.0 13.2 200 537-741 21-226 (302)
233 4fmz_A Internalin; leucine ric 100.0 5.9E-32 2E-36 291.1 24.5 285 91-401 44-328 (347)
234 3rgf_A Cyclin-dependent kinase 100.0 4E-33 1.4E-37 306.6 15.6 199 540-742 26-241 (405)
235 2z81_A CD282 antigen, TOLL-lik 100.0 6.2E-33 2.1E-37 318.1 17.9 178 82-276 5-184 (549)
236 3kvw_A DYRK2, dual specificity 100.0 3.6E-33 1.2E-37 308.6 15.3 198 537-743 99-305 (429)
237 2wqm_A Serine/threonine-protei 100.0 9.2E-33 3.1E-37 292.4 17.5 201 537-740 34-239 (310)
238 1phk_A Phosphorylase kinase; g 100.0 8E-33 2.7E-37 291.1 16.7 198 537-741 19-233 (298)
239 2i1m_A Macrophage colony-stimu 100.0 1.9E-33 6.6E-38 300.8 12.2 203 537-741 48-271 (333)
240 2yfx_A Tyrosine-protein kinase 100.0 2.5E-33 8.6E-38 299.1 12.9 203 537-741 32-250 (327)
241 1x8b_A WEE1HU, WEE1-like prote 100.0 6.1E-33 2.1E-37 290.3 15.4 197 536-739 12-233 (289)
242 2ycf_A Serine/threonine-protei 100.0 7.2E-33 2.5E-37 294.9 16.1 199 536-742 11-224 (322)
243 2a19_B Interferon-induced, dou 100.0 3.6E-33 1.2E-37 291.5 13.5 195 536-738 12-222 (284)
244 3oja_B Anopheles plasmodium-re 100.0 2.4E-32 8E-37 315.7 21.3 296 112-422 48-361 (597)
245 1fvr_A Tyrosine-protein kinase 100.0 2.5E-33 8.4E-38 299.2 12.0 201 537-741 27-246 (327)
246 2pml_X PFPK7, Ser/Thr protein 100.0 4.2E-33 1.4E-37 300.2 13.5 199 537-742 33-257 (348)
247 2r3i_A Cell division protein k 100.0 7.4E-33 2.5E-37 291.5 15.0 200 538-742 6-209 (299)
248 3g2f_A Bone morphogenetic prot 100.0 3.1E-33 1E-37 299.7 12.2 193 538-739 16-237 (336)
249 3com_A Serine/threonine-protei 100.0 1.7E-32 5.6E-37 291.0 17.7 198 537-741 31-229 (314)
250 2w1i_A JAK2; chromosomal rearr 100.0 3E-33 1E-37 298.4 11.8 200 537-739 43-250 (326)
251 2i6l_A Mitogen-activated prote 100.0 6E-33 2.1E-37 295.1 13.9 200 537-742 13-230 (320)
252 2wtk_C Serine/threonine-protei 100.0 1.4E-32 4.8E-37 290.2 16.6 201 538-741 8-217 (305)
253 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-32 3.7E-37 294.1 15.8 201 537-741 26-238 (326)
254 2wei_A Calmodulin-domain prote 100.0 1.6E-32 5.3E-37 287.2 16.4 198 536-741 23-226 (287)
255 2vwi_A Serine/threonine-protei 100.0 1.9E-33 6.6E-38 296.5 9.6 203 537-741 17-231 (303)
256 4fmz_A Internalin; leucine ric 100.0 8.2E-32 2.8E-36 289.9 22.5 281 91-397 66-346 (347)
257 1blx_A Cyclin-dependent kinase 100.0 1.3E-32 4.4E-37 293.5 15.4 201 537-742 13-224 (326)
258 4exu_A Mitogen-activated prote 100.0 9.6E-33 3.3E-37 299.8 14.6 195 537-742 44-247 (371)
259 2j0j_A Focal adhesion kinase 1 100.0 5.6E-33 1.9E-37 322.1 13.6 202 535-741 390-597 (656)
260 1z57_A Dual specificity protei 100.0 1.3E-32 4.5E-37 294.9 15.2 206 537-751 16-248 (339)
261 1wak_A Serine/threonine-protei 100.0 1.8E-32 6E-37 300.8 16.3 201 537-745 39-301 (397)
262 1b6c_B TGF-B superfamily recep 100.0 3.5E-32 1.2E-36 292.2 18.2 198 536-741 43-271 (342)
263 1o6v_A Internalin A; bacterial 100.0 1.2E-31 4.1E-36 300.5 23.0 282 91-401 68-370 (466)
264 2b9h_A MAP kinase FUS3, mitoge 100.0 1.6E-32 5.5E-37 296.2 15.3 198 538-741 14-227 (353)
265 3fme_A Dual specificity mitoge 100.0 9.7E-33 3.3E-37 289.2 12.7 198 537-739 9-215 (290)
266 1u46_A ACK-1, activated CDC42 100.0 4.6E-33 1.6E-37 291.8 10.1 200 537-741 20-229 (291)
267 3an0_A Dual specificity mitoge 100.0 1.3E-32 4.6E-37 295.2 13.8 198 538-740 54-260 (340)
268 3gxj_A TGF-beta receptor type- 100.0 7.4E-34 2.5E-38 299.7 3.4 195 537-739 5-230 (303)
269 2vx3_A Dual specificity tyrosi 100.0 4E-32 1.4E-36 296.2 16.8 199 537-743 56-264 (382)
270 3e3p_A Protein kinase, putativ 100.0 2.6E-32 8.7E-37 295.5 14.8 202 537-742 25-237 (360)
271 4g8a_A TOLL-like receptor 4; l 100.0 5.2E-31 1.8E-35 307.5 26.9 312 91-402 76-585 (635)
272 1xku_A Decorin; proteoglycan, 100.0 4.3E-31 1.5E-35 282.2 23.1 291 69-371 19-330 (330)
273 2z66_A Variable lymphocyte rec 100.0 2.4E-32 8.1E-37 288.7 13.2 285 77-404 3-294 (306)
274 2ft3_A Biglycan; proteoglycan, 100.0 3.5E-31 1.2E-35 283.0 22.4 283 76-371 28-331 (332)
275 3bz5_A Internalin-J, INLJ; leu 100.0 7E-31 2.4E-35 292.2 25.6 253 91-375 42-301 (457)
276 3coi_A Mitogen-activated prote 100.0 2.4E-32 8.3E-37 294.7 13.4 195 537-742 26-229 (353)
277 1zy4_A Serine/threonine-protei 100.0 7.6E-32 2.6E-36 284.1 16.5 192 537-732 8-226 (303)
278 3fhr_A MAP kinase-activated pr 100.0 6.1E-32 2.1E-36 289.3 14.8 195 540-743 34-235 (336)
279 2eu9_A Dual specificity protei 100.0 1E-31 3.5E-36 290.0 16.1 206 537-751 21-253 (355)
280 1o6v_A Internalin A; bacterial 100.0 1.1E-30 3.6E-35 292.8 24.8 279 91-398 46-345 (466)
281 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-30 4.5E-35 290.0 25.3 275 91-398 64-353 (457)
282 3qa8_A MGC80376 protein; kinas 100.0 3E-32 1E-36 310.0 12.2 201 536-739 15-225 (676)
283 3cek_A Dual specificity protei 100.0 9.5E-32 3.2E-36 285.0 15.2 197 537-740 30-242 (313)
284 2rio_A Serine/threonine-protei 100.0 6.5E-32 2.2E-36 299.2 14.3 196 539-740 19-243 (434)
285 3a99_A Proto-oncogene serine/t 100.0 4.4E-32 1.5E-36 288.4 11.8 195 537-739 45-251 (320)
286 2z80_A TOLL-like receptor 2, v 100.0 1.1E-31 3.8E-36 289.5 15.0 280 81-402 30-319 (353)
287 3aln_A Dual specificity mitoge 100.0 8.9E-32 3.1E-36 287.1 14.0 198 537-739 24-231 (327)
288 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-32 4.2E-37 292.6 7.0 198 537-741 35-247 (319)
289 1q8y_A SR protein kinase; tran 100.0 8.8E-32 3E-36 292.7 12.8 200 536-743 20-241 (373)
290 2iwi_A Serine/threonine-protei 100.0 9.1E-32 3.1E-36 285.1 12.0 195 537-739 33-241 (312)
291 2vuw_A Serine/threonine-protei 100.0 1E-31 3.5E-36 287.8 12.3 192 535-738 20-278 (336)
292 3p23_A Serine/threonine-protei 100.0 1.8E-31 6.2E-36 294.7 14.0 195 537-739 26-232 (432)
293 2z80_A TOLL-like receptor 2, v 100.0 2.7E-31 9.4E-36 286.5 15.1 274 117-423 33-318 (353)
294 3zyi_A Leucine-rich repeat-con 100.0 1.9E-30 6.4E-35 289.6 21.3 240 106-401 68-307 (452)
295 2z66_A Variable lymphocyte rec 100.0 4.9E-31 1.7E-35 278.6 15.3 251 118-401 10-265 (306)
296 2pzi_A Probable serine/threoni 100.0 1.7E-31 5.9E-36 312.8 11.1 190 537-739 82-278 (681)
297 2dyl_A Dual specificity mitoge 100.0 6.7E-31 2.3E-35 279.1 14.0 196 537-739 27-231 (318)
298 1ozn_A Reticulon 4 receptor; N 100.0 6.7E-30 2.3E-34 266.9 20.5 263 85-356 5-268 (285)
299 3uqc_A Probable conserved tran 100.0 1.5E-30 5.1E-35 271.5 15.2 171 537-742 33-207 (286)
300 4fcg_A Uncharacterized protein 100.0 4.3E-30 1.5E-34 273.6 18.6 286 58-397 22-314 (328)
301 3dzo_A Rhoptry kinase domain; 100.0 1.7E-30 5.8E-35 285.9 14.5 195 539-740 82-320 (413)
302 1jl5_A Outer protein YOPM; leu 100.0 5.1E-29 1.8E-33 276.9 24.9 271 91-404 91-379 (454)
303 3g06_A SSPH2 (leucine-rich rep 100.0 8.1E-30 2.8E-34 291.9 18.7 287 67-405 11-305 (622)
304 1jl5_A Outer protein YOPM; leu 100.0 7.3E-30 2.5E-34 283.7 17.4 251 91-374 11-291 (454)
305 3zyi_A Leucine-rich repeat-con 100.0 4.2E-29 1.4E-33 278.7 21.3 251 117-424 56-308 (452)
306 3zyj_A Leucine-rich repeat-con 100.0 5.1E-29 1.8E-33 277.0 21.3 252 116-401 44-296 (440)
307 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-29 5.3E-34 264.1 15.6 254 118-404 14-268 (285)
308 1wwl_A Monocyte differentiatio 100.0 3E-31 1E-35 280.8 2.6 253 137-399 41-311 (312)
309 3zyj_A Leucine-rich repeat-con 100.0 9.2E-29 3.1E-33 274.9 21.7 243 99-374 51-293 (440)
310 3m2w_A MAP kinase-activated pr 100.0 4.6E-29 1.6E-33 262.5 16.9 171 540-740 23-201 (299)
311 1wwl_A Monocyte differentiatio 100.0 9.2E-31 3.1E-35 277.1 3.5 267 68-374 21-310 (312)
312 3o53_A Protein LRIM1, AGAP0063 100.0 6.4E-31 2.2E-35 278.9 0.9 264 118-400 13-279 (317)
313 3o53_A Protein LRIM1, AGAP0063 100.0 5.4E-30 1.8E-34 271.8 5.0 272 89-379 8-282 (317)
314 3oja_A Leucine-rich immune mol 100.0 1.3E-29 4.5E-34 284.4 6.7 235 139-392 34-270 (487)
315 1z7x_W Ribonuclease inhibitor; 99.9 3.4E-31 1.2E-35 296.8 -10.3 307 92-398 29-384 (461)
316 3oja_A Leucine-rich immune mol 99.9 1.6E-28 5.3E-33 275.7 10.0 251 100-369 19-271 (487)
317 1z7x_W Ribonuclease inhibitor; 99.9 1.6E-30 5.4E-35 291.3 -7.0 304 91-399 56-413 (461)
318 4azs_A Methyltransferase WBDD; 99.9 1.1E-28 3.8E-33 280.7 3.4 185 542-736 241-437 (569)
319 2o6q_A Variable lymphocyte rec 99.9 6.5E-26 2.2E-30 234.6 20.3 217 77-327 3-220 (270)
320 2z62_A TOLL-like receptor 4, v 99.9 6.2E-26 2.1E-30 235.6 19.6 227 143-402 11-242 (276)
321 2z62_A TOLL-like receptor 4, v 99.9 1E-25 3.5E-30 234.0 18.5 225 119-376 11-240 (276)
322 3g06_A SSPH2 (leucine-rich rep 99.9 4.3E-25 1.5E-29 252.8 21.8 248 91-384 61-308 (622)
323 3rfs_A Internalin B, repeat mo 99.9 6.4E-26 2.2E-30 234.8 12.4 224 116-357 20-243 (272)
324 3goz_A Leucine-rich repeat-con 99.9 2.6E-27 8.8E-32 256.1 1.0 261 96-381 3-305 (362)
325 2o6q_A Variable lymphocyte rec 99.9 2.5E-24 8.6E-29 222.6 20.2 206 164-401 17-222 (270)
326 3rfs_A Internalin B, repeat mo 99.9 2.1E-25 7.2E-30 230.9 11.7 223 140-404 20-242 (272)
327 1p9a_G Platelet glycoprotein I 99.9 1.7E-24 5.7E-29 226.0 18.2 136 263-400 76-211 (290)
328 4glp_A Monocyte differentiatio 99.9 2.8E-25 9.5E-30 234.7 12.0 226 116-374 65-308 (310)
329 1p9a_G Platelet glycoprotein I 99.9 2.5E-24 8.4E-29 224.7 18.2 116 258-374 94-209 (290)
330 3en9_A Glycoprotease, O-sialog 99.9 9.5E-26 3.3E-30 255.2 6.6 184 539-738 340-539 (540)
331 2ca6_A RAN GTPase-activating p 99.9 4E-27 1.4E-31 257.1 -4.6 257 107-401 24-320 (386)
332 2ast_B S-phase kinase-associat 99.9 1.3E-26 4.5E-31 248.0 -0.9 232 82-322 38-282 (336)
333 3goz_A Leucine-rich repeat-con 99.9 2.7E-26 9.2E-31 248.1 0.5 261 120-404 3-304 (362)
334 2ca6_A RAN GTPase-activating p 99.9 1.6E-26 5.6E-31 252.3 -3.7 239 130-417 23-314 (386)
335 3m19_A Variable lymphocyte rec 99.9 2E-23 6.8E-28 213.3 17.4 182 212-401 15-196 (251)
336 2xwt_C Thyrotropin receptor; s 99.9 1.6E-23 5.6E-28 212.3 16.1 196 116-346 32-236 (239)
337 4glp_A Monocyte differentiatio 99.9 6.6E-24 2.2E-28 224.2 12.5 205 187-398 91-308 (310)
338 2ast_B S-phase kinase-associat 99.9 2E-25 6.9E-30 238.8 0.7 253 116-404 48-313 (336)
339 2xwt_C Thyrotropin receptor; s 99.9 1.6E-23 5.4E-28 212.5 14.3 198 139-371 31-237 (239)
340 3m19_A Variable lymphocyte rec 99.9 4.6E-23 1.6E-27 210.7 17.6 188 83-327 7-194 (251)
341 3cvr_A Invasion plasmid antige 99.9 1.4E-23 4.9E-28 237.2 12.8 211 68-336 33-254 (571)
342 4ay9_X Follicle-stimulating ho 99.9 1.2E-22 4.2E-27 218.2 16.9 247 79-347 7-257 (350)
343 1h6u_A Internalin H; cell adhe 99.9 8.4E-23 2.9E-27 215.2 14.9 195 111-326 37-231 (308)
344 4ay9_X Follicle-stimulating ho 99.9 2.7E-22 9.3E-27 215.5 18.0 216 118-342 12-232 (350)
345 1h6u_A Internalin H; cell adhe 99.9 1E-22 3.4E-27 214.6 14.2 208 120-398 24-231 (308)
346 3ogk_B Coronatine-insensitive 99.9 3.4E-24 1.2E-28 247.7 0.0 305 91-401 164-530 (592)
347 2o6s_A Variable lymphocyte rec 99.9 4.5E-22 1.5E-26 197.1 13.7 201 77-306 3-203 (208)
348 1zar_A RIO2 kinase; serine kin 99.9 6.3E-23 2.2E-27 212.7 4.4 141 539-710 94-252 (282)
349 3ogk_B Coronatine-insensitive 99.9 3.7E-24 1.3E-28 247.5 -6.7 306 92-402 139-506 (592)
350 3cvr_A Invasion plasmid antige 99.9 1.5E-21 5E-26 220.8 14.6 95 263-383 159-253 (571)
351 2o6s_A Variable lymphocyte rec 99.9 9.1E-21 3.1E-25 187.6 17.2 179 118-311 10-188 (208)
352 4b8c_D Glucose-repressible alc 99.8 4.9E-22 1.7E-26 233.0 5.0 229 46-306 129-359 (727)
353 1dce_A Protein (RAB geranylger 99.8 7.1E-23 2.4E-27 232.8 -3.0 204 160-391 346-567 (567)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 2.3E-20 7.7E-25 186.3 11.6 157 243-402 14-171 (220)
355 2v9t_B SLIT homolog 2 protein 99.8 3.6E-20 1.2E-24 184.8 11.9 156 243-401 14-169 (220)
356 1dce_A Protein (RAB geranylger 99.8 1.2E-22 4E-27 231.0 -7.4 204 136-367 346-567 (567)
357 1m9s_A Internalin B; cell inva 99.8 1.5E-20 5E-25 215.0 9.6 172 112-326 40-211 (605)
358 1m9s_A Internalin B; cell inva 99.8 9.8E-20 3.3E-24 208.2 15.7 169 91-278 43-211 (605)
359 2xot_A Amphoterin-induced prot 99.8 4.9E-20 1.7E-24 198.7 11.9 180 214-401 21-206 (361)
360 2p1m_B Transport inhibitor res 99.8 2E-22 6.8E-27 233.0 -7.8 303 91-397 105-494 (594)
361 2p1m_B Transport inhibitor res 99.8 4E-22 1.4E-26 230.4 -5.8 302 91-398 130-520 (594)
362 1h6t_A Internalin B; cell adhe 99.8 1.8E-20 6.2E-25 195.5 7.2 82 113-200 44-125 (291)
363 1h6t_A Internalin B; cell adhe 99.8 1E-19 3.6E-24 189.8 12.8 190 118-328 27-216 (291)
364 3e6j_A Variable lymphocyte rec 99.8 3.3E-19 1.1E-23 179.1 14.0 160 75-279 15-174 (229)
365 3e6j_A Variable lymphocyte rec 99.8 4.4E-19 1.5E-23 178.2 14.6 157 241-401 20-176 (229)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 2.8E-19 9.7E-24 178.3 12.5 155 215-377 15-170 (220)
367 2xot_A Amphoterin-induced prot 99.8 4.8E-19 1.6E-23 191.0 14.4 176 142-349 21-202 (361)
368 2v9t_B SLIT homolog 2 protein 99.8 1.3E-18 4.3E-23 173.6 14.7 124 98-224 18-141 (220)
369 1xeu_A Internalin C; cellular 99.8 3.5E-19 1.2E-23 182.8 6.9 170 113-302 17-186 (263)
370 1xeu_A Internalin C; cellular 99.8 2.9E-19 9.8E-24 183.5 5.2 171 137-327 17-187 (263)
371 4b8c_D Glucose-repressible alc 99.8 4.4E-19 1.5E-23 208.0 7.2 223 139-397 173-404 (727)
372 1w8a_A SLIT protein; signaling 99.8 2.5E-18 8.5E-23 167.6 11.2 155 267-424 11-167 (192)
373 4ezg_A Putative uncharacterize 99.8 2.2E-18 7.5E-23 168.8 10.9 151 241-398 45-195 (197)
374 1zth_A RIO1 serine protein kin 99.7 1.1E-18 3.8E-23 178.6 8.8 135 539-686 51-219 (258)
375 4ezg_A Putative uncharacterize 99.7 3.6E-18 1.2E-22 167.3 9.8 153 112-301 41-194 (197)
376 1w8a_A SLIT protein; signaling 99.7 4.9E-18 1.7E-22 165.5 9.9 157 243-404 11-169 (192)
377 3sb4_A Hypothetical leucine ri 99.7 7.4E-18 2.5E-22 179.2 4.8 103 287-391 225-328 (329)
378 2o6r_A Variable lymphocyte rec 99.7 1E-16 3.5E-21 154.0 11.7 139 77-228 3-141 (177)
379 2wfh_A SLIT homolog 2 protein 99.7 1.3E-16 4.3E-21 155.4 11.6 132 267-402 13-144 (193)
380 2ell_A Acidic leucine-rich nuc 99.7 1.5E-16 5.1E-21 151.4 10.6 132 264-397 24-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 9.6E-17 3.3E-21 152.7 8.4 135 241-378 25-164 (168)
382 2je0_A Acidic leucine-rich nuc 99.7 1.4E-16 4.9E-21 148.2 8.8 127 264-392 17-148 (149)
383 2o6r_A Variable lymphocyte rec 99.6 6.1E-16 2.1E-20 148.5 12.0 134 266-402 9-142 (177)
384 2wfh_A SLIT homolog 2 protein 99.6 7E-16 2.4E-20 150.1 12.1 127 95-225 14-140 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 2.6E-16 9E-21 146.4 8.3 128 240-369 17-149 (149)
386 3sb4_A Hypothetical leucine ri 99.6 5.1E-16 1.7E-20 165.0 9.1 243 114-367 48-328 (329)
387 4gyi_A RIO2 kinase; protein ki 99.6 8.4E-17 2.9E-21 170.6 2.8 137 537-688 97-267 (397)
388 4fdw_A Leucine rich hypothetic 99.6 2E-14 6.9E-19 156.1 19.9 263 115-395 113-381 (401)
389 4fdw_A Leucine rich hypothetic 99.6 1.9E-14 6.6E-19 156.2 19.2 248 109-373 130-383 (401)
390 1ds9_A Outer arm dynein; leuci 99.6 4.9E-17 1.7E-21 159.3 -2.5 150 242-398 20-186 (198)
391 1a9n_A U2A', U2A'; complex (nu 99.5 6.9E-15 2.4E-19 141.0 8.2 132 260-397 15-153 (176)
392 1ds9_A Outer arm dynein; leuci 99.5 1.4E-16 4.9E-21 156.0 -4.2 127 241-374 49-186 (198)
393 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.3E-19 138.5 8.3 110 110-224 14-126 (176)
394 3g39_A Variable lymphocyte rec 99.5 6.2E-14 2.1E-18 133.3 9.9 108 291-401 12-119 (170)
395 3g39_A Variable lymphocyte rec 99.5 1.9E-13 6.5E-18 129.9 11.7 102 96-200 14-115 (170)
396 2r9u_A Variable lymphocyte rec 99.4 3.3E-13 1.1E-17 128.8 11.6 103 95-200 16-118 (174)
397 2r9u_A Variable lymphocyte rec 99.4 2E-13 7E-18 130.2 10.0 90 312-401 33-122 (174)
398 3un9_A NLR family member X1; l 99.4 4.6E-15 1.6E-19 159.6 -6.3 66 308-373 207-283 (372)
399 3un9_A NLR family member X1; l 99.4 6.9E-15 2.4E-19 158.2 -5.9 65 333-397 180-252 (372)
400 4fs7_A Uncharacterized protein 99.4 2.7E-11 9.1E-16 131.9 21.3 284 92-394 72-376 (394)
401 2ifg_A High affinity nerve gro 99.3 3E-12 1E-16 136.9 10.7 108 80-200 7-116 (347)
402 2ifg_A High affinity nerve gro 99.2 8.1E-12 2.8E-16 133.5 8.8 93 308-401 27-120 (347)
403 4gt6_A Cell surface protein; l 99.2 5E-10 1.7E-14 121.7 18.4 272 109-395 57-368 (394)
404 4fs7_A Uncharacterized protein 99.2 5.4E-10 1.8E-14 121.5 17.4 269 108-394 64-353 (394)
405 4gt6_A Cell surface protein; l 99.1 1.6E-09 5.4E-14 117.8 20.3 286 93-396 66-390 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 6.1E-11 2.1E-15 121.3 7.8 135 540-684 19-212 (263)
407 2ra8_A Uncharacterized protein 99.1 1.6E-11 5.5E-16 130.8 1.1 59 287-347 278-341 (362)
408 2ra8_A Uncharacterized protein 99.1 1.8E-11 6.2E-16 130.4 0.2 206 91-323 107-341 (362)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 4.4E-10 1.5E-14 114.6 8.3 126 544-685 29-214 (264)
410 3dxp_A Putative acyl-COA dehyd 98.9 2.7E-09 9.1E-14 114.5 8.6 140 541-686 44-249 (359)
411 3sg8_A APH(2'')-ID; antibiotic 98.8 1.3E-09 4.4E-14 114.0 2.4 184 541-737 26-287 (304)
412 4h09_A Hypothetical leucine ri 98.8 2.6E-07 8.8E-12 99.6 19.7 274 108-393 62-342 (379)
413 3rw6_A Nuclear RNA export fact 98.7 2.5E-10 8.4E-15 115.3 -4.4 66 161-228 168-237 (267)
414 4h09_A Hypothetical leucine ri 98.6 1.7E-06 5.7E-11 93.2 20.1 275 92-384 70-356 (379)
415 1io0_A Tropomodulin; LRR prote 98.6 7.7E-09 2.6E-13 99.3 0.8 120 258-397 30-164 (185)
416 3rw6_A Nuclear RNA export fact 98.6 1.6E-08 5.5E-13 102.0 2.6 105 284-390 137-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.5 7.7E-09 2.6E-13 99.3 -0.7 111 239-349 35-164 (185)
418 3r70_A Aminoglycoside phosphot 98.4 5.7E-07 2E-11 94.4 10.4 179 540-735 42-296 (320)
419 3d1u_A Putative fructosamine-3 98.4 9.6E-07 3.3E-11 90.9 11.5 75 540-619 20-97 (288)
420 3tdw_A Gentamicin resistance p 98.4 1.8E-06 6.2E-11 89.9 12.4 136 541-687 25-226 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.2 9.7E-06 3.3E-10 82.7 11.9 133 542-685 31-223 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 5.7E-06 1.9E-10 88.2 9.0 141 541-687 47-245 (362)
423 3e4g_A ATP synthase subunit S, 98.1 1.3E-06 4.5E-11 81.6 2.6 83 289-371 62-150 (176)
424 3ats_A Putative uncharacterize 98.0 4.8E-06 1.6E-10 88.8 6.4 80 541-620 26-121 (357)
425 3e4g_A ATP synthase subunit S, 98.0 1.8E-06 6.2E-11 80.6 2.0 91 305-395 54-150 (176)
426 2olc_A MTR kinase, methylthior 97.8 6.3E-05 2.2E-09 81.3 10.2 74 541-617 36-120 (397)
427 2q83_A YTAA protein; 2635576, 97.8 4E-05 1.4E-09 80.9 8.4 140 541-685 38-252 (346)
428 3f7w_A Putative fructosamine-3 97.6 0.00015 5.2E-09 74.5 10.0 75 540-619 20-97 (288)
429 1pgv_A TMD-1, tropomodulin TMD 97.6 7.4E-06 2.5E-10 78.0 -0.5 64 263-326 40-112 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.6 1.5E-05 5.2E-10 75.8 1.3 112 284-395 37-168 (197)
431 2pyw_A Uncharacterized protein 97.5 0.00011 3.9E-09 79.9 7.7 80 654-734 231-313 (420)
432 3jr1_A Putative fructosamine-3 97.3 0.0013 4.5E-08 68.0 12.4 135 541-681 42-232 (312)
433 3csv_A Aminoglycoside phosphot 97.0 0.0036 1.2E-07 65.5 11.4 140 541-686 24-218 (333)
434 1zyl_A Hypothetical protein YI 96.9 0.0032 1.1E-07 65.7 10.1 140 542-685 33-223 (328)
435 3rfe_A Platelet glycoprotein I 96.7 0.003 1E-07 56.0 6.8 38 139-176 31-68 (130)
436 3dxq_A Choline/ethanolamine ki 96.7 0.0011 3.8E-08 68.4 4.6 136 541-686 24-203 (301)
437 1nw1_A Choline kinase (49.2 KD 96.6 0.0046 1.6E-07 67.2 9.3 71 541-618 79-158 (429)
438 3rfe_A Platelet glycoprotein I 96.6 0.0022 7.7E-08 56.8 5.5 60 340-401 12-72 (130)
439 2ppq_A HSK, HK, homoserine kin 96.6 0.002 7E-08 67.0 5.9 142 541-685 28-217 (322)
440 3feg_A Choline/ethanolamine ki 96.4 0.0094 3.2E-07 63.3 9.7 140 541-686 56-255 (379)
441 3c5i_A Choline kinase; choline 96.3 0.0039 1.3E-07 66.4 6.2 72 541-618 39-120 (369)
442 2qg7_A Ethanolamine kinase PV0 96.1 0.023 7.7E-07 62.0 10.9 73 541-619 114-188 (458)
443 3i1a_A Spectinomycin phosphotr 95.2 0.051 1.8E-06 56.8 9.3 32 655-686 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.1 0.055 1.9E-06 57.6 9.2 140 541-685 58-280 (401)
445 3mes_A Choline kinase; malaria 94.7 0.08 2.7E-06 57.0 9.1 72 541-618 76-156 (424)
446 3g15_A CK, chetk-alpha, cholin 90.4 0.84 2.9E-05 48.7 9.6 30 657-686 246-281 (401)
447 2yle_A Protein spire homolog 1 90.0 1.1 3.8E-05 42.7 8.8 102 618-736 34-135 (229)
448 2ks1_B Epidermal growth factor 84.8 0.75 2.6E-05 31.3 3.0 6 461-466 14-19 (44)
449 2l2t_A Receptor tyrosine-prote 82.3 0.94 3.2E-05 30.8 2.7 11 477-487 30-40 (44)
450 2jwa_A Receptor tyrosine-prote 80.4 1.1 3.9E-05 30.3 2.6 7 479-485 33-39 (44)
451 4ann_A ESSB; membrane protein, 77.1 4.5 0.00015 38.4 6.7 116 589-739 43-159 (215)
452 2ks1_B Epidermal growth factor 74.8 1.4 4.8E-05 30.0 1.8 17 456-472 12-28 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 73.6 0.34 1.1E-05 52.8 -2.5 59 540-601 147-214 (463)
454 2k1k_A Ephrin type-A receptor 72.6 1.1 3.7E-05 29.5 0.8 20 452-471 8-27 (38)
455 2l2t_A Receptor tyrosine-prote 71.5 1.6 5.6E-05 29.6 1.5 24 464-487 20-43 (44)
456 4ano_A ESSB; membrane protein, 67.3 19 0.00065 34.2 8.5 116 589-739 48-164 (219)
457 2k9y_A Ephrin type-A receptor 61.9 2.1 7E-05 28.7 0.5 12 461-472 16-27 (41)
458 2jwa_A Receptor tyrosine-prote 48.3 6 0.00021 26.8 1.0 30 457-486 14-43 (44)
459 2lz0_A Uncharacterized protein 44.2 34 0.0012 27.9 5.3 45 127-172 8-52 (100)
460 2klu_A T-cell surface glycopro 38.1 29 0.00098 25.5 3.2 18 460-477 12-29 (70)
461 2lz0_A Uncharacterized protein 35.1 69 0.0024 26.0 5.8 46 251-297 7-52 (100)
462 3qrx_B Melittin; calcium-bindi 25.1 44 0.0015 19.1 1.9 23 462-484 2-24 (26)
463 3ls8_A Phosphatidylinositol 3- 21.5 5.3E+02 0.018 28.5 11.3 70 610-684 416-501 (614)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.1e-47 Score=449.80 Aligned_cols=344 Identities=30% Similarity=0.444 Sum_probs=214.2
Q ss_pred cCHHHHHHHHHHHHhCCCCCCCcCCCCCCCCCCCCCCCcceEeeCCCEEEEEcCCCCcccc---cCcc------------
Q 041878 46 VTQADYQSLRAIKHDLIDPHGFLRSWNDSGVGACSGGWAGIKCVKGQVIAIQLPWRRLGGR---ISEK------------ 110 (773)
Q Consensus 46 ~~~~~~~~L~~~k~~~~~~~~~l~sW~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~---i~~~------------ 110 (773)
+.++|++||++||+++.||. .+++|+. +.+||. |.||+|+.++|+.|+|++++++|. +++.
T Consensus 9 ~~~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~--w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKN-LLPDWSS-NKNPCT--FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGG--STTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred CCHHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcC--CcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 46889999999999999998 8999964 566665 999999999999999999999987 6654
Q ss_pred -----------ccCCCCCcEEEccCCcccccCCC--CCCCCCCCceEEcccCccCCCCCCCC-CCCCCCCEEEccCCCCC
Q 041878 111 -----------ISQLHALRKLSLHDNLLAGPVPW--SLGFLPNLRGVYLFNNRLSGSIPPSI-GNCPNLQTLDLSNNALI 176 (773)
Q Consensus 111 -----------l~~l~~L~~L~L~~n~l~~~~~~--~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~ 176 (773)
++++++|++|+|++|.++|.+|. .++.+++|++|+|++|.+++.+|..+ .++++|++|+|++|.++
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 45555666666666666655555 55666666666666666655555544 55566666666666665
Q ss_pred CCCccc---cccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccc
Q 041878 177 GAIPPS---LANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIA 253 (773)
Q Consensus 177 ~~~~~~---l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~ 253 (773)
+..|.. +.++++|++|+|++|.+++..+. ..+++|++|+|++|++++.+|. ++.+. +|++|+|++|.++
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~-----~L~~L~Ls~n~l~ 236 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCS-----ALQHLDISGNKLS 236 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCC-----SCCEEECCSSCCC
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCC-----CCCEEECcCCcCC
Confidence 555444 44555555555555555544332 4555555556666655554443 33332 5666666666666
Q ss_pred cccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCccccccc-ccCceEEccCCCCCCCcchhh
Q 041878 254 GTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNI-TSLVSLNLENNRLGNKIPEGL 332 (773)
Q Consensus 254 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~l 332 (773)
+.+|..++.+++|++|+|++|++++.+|.. .+++|++|++++|++++.+|..+... ++|++|+|++|++++.+|..+
T Consensus 237 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~ 314 (768)
T 3rgz_A 237 GDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314 (768)
T ss_dssp SCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGG
T ss_pred CcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHH
Confidence 656666666666666666666665554443 45555555555555555555555443 556666666666655555556
Q ss_pred ccccccccccccCcccccccccc-cCCCCcCceeecCCccCccCCCchhhccC-ccCEEEeecccCCCCCchh
Q 041878 333 ERLQNLTVLNLKNNQFKGHIPET-IGNISGINQLDLSENDFTGEISPSLASLA-NLTSFNVSYNNLSGSVPPL 403 (773)
Q Consensus 333 ~~l~~L~~L~ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~g~~p~~ 403 (773)
+.+++|++|++++|+++|.+|.. ++++++|++|+|++|++++.+|..+..++ +|+.|++++|+++|.+|..
T Consensus 315 ~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~ 387 (768)
T 3rgz_A 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387 (768)
T ss_dssp GGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTT
T ss_pred hcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChh
Confidence 66666666666666665555544 55566666666666666555555555554 5555555555555544443
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-46 Score=392.72 Aligned_cols=203 Identities=29% Similarity=0.491 Sum_probs=175.8
Q ss_pred HhhcccccccceEEEEEEeC------CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLE------DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+| ..++..++||
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-~~~~~~~lV~ 94 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-VEGDPLIMVF 94 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSSEEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE-eeCCEEEEEE
Confidence 45688999999999999863 4678999999877666778899999999999999999999999 4556899999
Q ss_pred eecCCCCHHHHHhhcC----------CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecC
Q 041878 612 DFMPKGSLASFLHARG----------PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG 681 (773)
|||++|+|.++++..+ ....++|.+++.++.||++||+||| +++||||||||+|||+++++.+||+|||
T Consensus 95 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA-SQHFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp ECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred EcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCccCHhhEEECCCCcEEECCcc
Confidence 9999999999998643 2346899999999999999999999 8999999999999999999999999999
Q ss_pred Cccccccccccce-eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 682 LSRLMTAAANTNV-IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 682 ~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
+|+.......... ....||++|||||++.+..|+.++|||||||++|||+| |+.||...+.
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~ 236 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9987654433222 22458999999999999999999999999999999999 8999987543
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.5e-46 Score=395.62 Aligned_cols=203 Identities=26% Similarity=0.446 Sum_probs=170.3
Q ss_pred HhhcccccccceEEEEEEeC------CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLE------DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+| ...+..++||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-~~~~~~~lV~ 122 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC-TEGRPLLMVF 122 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSSEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-EECCEEEEEE
Confidence 45688999999999999864 4778999999877666678899999999999999999999999 4556899999
Q ss_pred eecCCCCHHHHHhhcCC------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEee
Q 041878 612 DFMPKGSLASFLHARGP------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIAD 679 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~D 679 (773)
|||++|+|.++++.... ...++|.+++.++.|||+||+||| +++||||||||+|||+++++.+||+|
T Consensus 123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GLHFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEETTTEEEECC
T ss_pred EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh-cCCeecccccHhhEEECCCCcEEEcc
Confidence 99999999999987532 235899999999999999999999 89999999999999999999999999
Q ss_pred cCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 680 FGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 680 fG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...+.
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 9999876544322 2234579999999999999999999999999999999999 8999987543
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-45 Score=439.44 Aligned_cols=334 Identities=35% Similarity=0.615 Sum_probs=271.4
Q ss_pred EEEEEcCCCCcccccCccccCCC-CCcEEEccCCcccccCCCCCCC--CCCCceEEcccCccCCCCCCCCCCCCCCCEEE
Q 041878 93 VIAIQLPWRRLGGRISEKISQLH-ALRKLSLHDNLLAGPVPWSLGF--LPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLD 169 (773)
Q Consensus 93 v~~l~l~~~~l~~~i~~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~--l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 169 (773)
++.|+|++|.++|.+|..+.+++ +|++|+|++|.+++.+|..+.. +++|++|+|++|++++.+|..++++++|++|+
T Consensus 345 L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 424 (768)
T 3rgz_A 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 424 (768)
T ss_dssp CCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEE
T ss_pred CCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEE
Confidence 33444444444444444444443 4444444444444444444444 56677777777777777777788888888888
Q ss_pred ccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccc
Q 041878 170 LSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDH 249 (773)
Q Consensus 170 Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~ 249 (773)
|++|.+++.+|..+..+++|++|+|++|++++.+|..+..+++|++|++++|++++.+|..+..+. +|++|+|++
T Consensus 425 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-----~L~~L~L~~ 499 (768)
T 3rgz_A 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-----NLNWISLSN 499 (768)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-----TCCEEECCS
T ss_pred CcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC-----CCCEEEccC
Confidence 888888888888888888888888888888888888888888888888888888888887776654 788999999
Q ss_pred cccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccc---------------------
Q 041878 250 NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTF--------------------- 308 (773)
Q Consensus 250 n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~--------------------- 308 (773)
|.+++.+|..++.+++|+.|+|++|++++.+|..+..+++|++|++++|.++|.+|..+
T Consensus 500 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~ 579 (768)
T 3rgz_A 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIK 579 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEE
T ss_pred CccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccc
Confidence 99988888888889999999999999988888889999999999999998887776543
Q ss_pred -------------------------------------------------cccccCceEEccCCCCCCCcchhhccccccc
Q 041878 309 -------------------------------------------------TNITSLVSLNLENNRLGNKIPEGLERLQNLT 339 (773)
Q Consensus 309 -------------------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 339 (773)
..+++|+.|+|++|++++.+|..++.+++|+
T Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 659 (768)
T 3rgz_A 580 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF 659 (768)
T ss_dssp CCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCC
T ss_pred cccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCC
Confidence 3357899999999999999999999999999
Q ss_pred cccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchh-hhccCCCCCCCCCCC
Q 041878 340 VLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL-LSKKFNSSSFVGNLQ 418 (773)
Q Consensus 340 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~~~~~n~~ 418 (773)
.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|+.|||++|+|+|.||.. ....+...+|.||+.
T Consensus 660 ~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~ 739 (768)
T 3rgz_A 660 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 739 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTE
T ss_pred EEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCch
Confidence 9999999999999999999999999999999999999999999999999999999999999975 336778888999999
Q ss_pred CCCCCCCCCCCCCC
Q 041878 419 LCGYSPSTACPSLA 432 (773)
Q Consensus 419 ~c~~~~~~~c~s~~ 432 (773)
+||.|++ .|....
T Consensus 740 Lcg~~l~-~C~~~~ 752 (768)
T 3rgz_A 740 LCGYPLP-RCDPSN 752 (768)
T ss_dssp EESTTSC-CCCSCC
T ss_pred hcCCCCc-CCCCCc
Confidence 9999877 786543
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.1e-46 Score=388.86 Aligned_cols=202 Identities=27% Similarity=0.450 Sum_probs=173.8
Q ss_pred hhcccccccceEEEEEEeC------CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 539 TAEIMGKSTYGTAYKATLE------DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
+.+.||+|+||+||+|.+. +++.||||+++... ....++|.+|+.++++++|||||+++|+| ...+..++||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~-~~~~~~~lV~ 108 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV-TKDQPLSMIF 108 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSCEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE-EECCEEEEEE
Confidence 4678999999999999863 46789999997543 33467899999999999999999999999 4556899999
Q ss_pred eecCCCCHHHHHhhcCC-------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEe
Q 041878 612 DFMPKGSLASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~ 678 (773)
|||++|+|.++++...+ ...++|.++++++.|||+||+||| +++||||||||+|||+++++.+||+
T Consensus 109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH-~~~iiHRDLK~~NILl~~~~~~Ki~ 187 (308)
T 4gt4_A 109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS-SHHVVHKDLATRNVLVYDKLNVKIS 187 (308)
T ss_dssp ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH-hCCCCCCCccccceEECCCCCEEEC
Confidence 99999999999976432 235899999999999999999999 9999999999999999999999999
Q ss_pred ecCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 679 DFGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 679 DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
|||+|+........ ......||++|||||++.++.|+.++|||||||++|||+| |+.||.+.+.
T Consensus 188 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp CSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred CcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence 99999876544322 2334579999999999999999999999999999999999 8999987543
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.7e-45 Score=429.89 Aligned_cols=351 Identities=23% Similarity=0.349 Sum_probs=261.4
Q ss_pred cccCHHHHHHHHHHHHhCCCCCCCcCCCCCCC----CCCCCCCC------------cceEee-CCCEEEEEcCCCCcccc
Q 041878 44 VIVTQADYQSLRAIKHDLIDPHGFLRSWNDSG----VGACSGGW------------AGIKCV-KGQVIAIQLPWRRLGGR 106 (773)
Q Consensus 44 ~~~~~~~~~~L~~~k~~~~~~~~~l~sW~~~~----~~~c~~~w------------~gv~c~-~~~v~~l~l~~~~l~~~ 106 (773)
..+..+|++||++||+++.|| +|+..+ .+||+|.| .||+|+ .++|+.|+|++++++|.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred cccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 345678999999999999887 786543 45644459 999997 58999999999999999
Q ss_pred cCccccCCCCCcEEEc-cCCccccc-------------------------------------------------------
Q 041878 107 ISEKISQLHALRKLSL-HDNLLAGP------------------------------------------------------- 130 (773)
Q Consensus 107 i~~~l~~l~~L~~L~L-~~n~l~~~------------------------------------------------------- 130 (773)
+|+.+++|++|++|+| ++|.++|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 77766554
Q ss_pred ---------------------CCCCCCCCCCCceEEcccCccCC-----------------CCCCCCC--CCCCCCEEEc
Q 041878 131 ---------------------VPWSLGFLPNLRGVYLFNNRLSG-----------------SIPPSIG--NCPNLQTLDL 170 (773)
Q Consensus 131 ---------------------~~~~l~~l~~L~~L~L~~n~l~~-----------------~~p~~l~--~l~~L~~L~L 170 (773)
+|..++++++|++|+|++|+|++ .+|..++ ++++|++|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 78889999999999999999998 3999988 9999999999
Q ss_pred cCCCCCCCCccccccccccceeeccccc-ccc-cCCccccCCC-------ccceeeccccccccccCC--cccccc----
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNS-LLG-SIPLSLTRLP-------SLSVLALQHNNLSGSVPN--NWGVLA---- 235 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~---- 235 (773)
++|.+.+.+|..++++++|++|+|++|+ +++ .+|..+.+++ +|++|+|++|+++ .+|. .++.+.
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 9999999999999999999999999998 887 6666554443 7777777777777 6665 444433
Q ss_pred -------------cCcccccceeeccccccccccCccCCCCCC-ccEEECCCCcccCCCCCCcCcccc--cceecccccc
Q 041878 236 -------------GNKSYQLQFLNLDHNLIAGTIPVSLGKLGL-LQEISLSHNKIVGPIPDELGKLSK--LQKLDLSYNA 299 (773)
Q Consensus 236 -------------~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~ 299 (773)
...+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|+
T Consensus 578 L~Ls~N~l~~lp~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~ 655 (876)
T 4ecn_A 578 LDCVHNKVRHLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNK 655 (876)
T ss_dssp EECTTSCCCBCCCCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred EECCCCCcccchhhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCc
Confidence 011224555555555555 44444555555 555555555555 34444433321 4444444444
Q ss_pred ccccCc----------------------------cc-ccccccCceEEccCCCCCCCcchhhcc--------cccccccc
Q 041878 300 IGGSFP----------------------------VT-FTNITSLVSLNLENNRLGNKIPEGLER--------LQNLTVLN 342 (773)
Q Consensus 300 l~~~~~----------------------------~~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~--------l~~L~~L~ 342 (773)
+++.+| .. +..+++|+.|+|++|+++ .+|..+.. +++|+.|+
T Consensus 656 l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~ 734 (876)
T 4ecn_A 656 IGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTID 734 (876)
T ss_dssp TTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEE
T ss_pred CCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEE
Confidence 433222 11 224566777777777776 44443322 33899999
Q ss_pred ccCcccccccccccC--CCCcCceeecCCccCccCCCchhhccCccCEEEeec------ccCCCCCchhhh
Q 041878 343 LKNNQFKGHIPETIG--NISGINQLDLSENDFTGEISPSLASLANLTSFNVSY------NNLSGSVPPLLS 405 (773)
Q Consensus 343 ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~------N~l~g~~p~~~~ 405 (773)
|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..+.
T Consensus 735 Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~ 803 (876)
T 4ecn_A 735 LRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGIT 803 (876)
T ss_dssp CCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGG
T ss_pred CCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHh
Confidence 9999999 7888887 99999999999999997 899999999999999976 888999998763
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-45 Score=389.39 Aligned_cols=197 Identities=22% Similarity=0.394 Sum_probs=175.7
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
...+.||+|+||+||+|... +|+.||||++........+.+.+|+++|++++|||||++++++. .++..|+|||||++
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-~~~~~~ivmEy~~g 155 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEECCCTT
T ss_pred EEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeCCCC
Confidence 34578999999999999864 79999999997665556677899999999999999999999995 45589999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
|+|.+++.+. .+++.++..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+....... ....
T Consensus 156 g~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~ 229 (346)
T 4fih_A 156 GALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKS 229 (346)
T ss_dssp EEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCC
T ss_pred CcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cccc
Confidence 9999999763 3899999999999999999999 99999999999999999999999999999987654332 2334
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 274 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 579999999999999999999999999999999999999997654
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-45 Score=383.39 Aligned_cols=213 Identities=24% Similarity=0.406 Sum_probs=184.1
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEeccc---CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK---TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.++||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++. .++..|+|||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~yivmE 112 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLS 112 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEe
Confidence 45678999999999999986 47899999999753 2334678999999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc-
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN- 691 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~- 691 (773)
|++||+|.+++++.+ .+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.......
T Consensus 113 y~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH-~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 113 YAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred cCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 999999999998764 3889999999999999999999 99999999999999999999999999999998754332
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhhh
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEW 757 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 757 (773)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+ ..+...++.+.++
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~---~~~~~~~i~~~~~ 251 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN---EGLIFAKIIKLEY 251 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTCC
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCC
Confidence 23345679999999999999999999999999999999999999997644 4455556665544
No 9
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.1e-45 Score=385.48 Aligned_cols=293 Identities=30% Similarity=0.498 Sum_probs=224.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCCCCcCCCCCCCCCCCCCCCcceEeeC----CCEEEEEcCCCCccc--ccCccccCCCCCc
Q 041878 45 IVTQADYQSLRAIKHDLIDPHGFLRSWNDSGVGACSGGWAGIKCVK----GQVIAIQLPWRRLGG--RISEKISQLHALR 118 (773)
Q Consensus 45 ~~~~~~~~~L~~~k~~~~~~~~~l~sW~~~~~~~c~~~w~gv~c~~----~~v~~l~l~~~~l~~--~i~~~l~~l~~L~ 118 (773)
.|.++|++||++||+++.||. .+++|+. +.++|.+.|.||+|.. ++|+.|+|++++++| .+|+.++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 489999999999999999886 7899965 5677766799999964 799999999999999 8999999999999
Q ss_pred EEEccC-CcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccc
Q 041878 119 KLSLHD-NLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYN 197 (773)
Q Consensus 119 ~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N 197 (773)
+|+|++ |++.+.+|..++.+++|++|+|++|++++.+|..|+++++|++|+|++|.+++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 8999999999999999999999999999899999999999999999999999888999999999999999999
Q ss_pred cccccCCccccCCC-ccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcc
Q 041878 198 SLLGSIPLSLTRLP-SLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKI 276 (773)
Q Consensus 198 ~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 276 (773)
++++.+|..+..++ +|++|++++|++++.+|..+..+ +|++|++++|.+++..|..+..+++|+.|+|++|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-- 231 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN-- 231 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC------CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSS--
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC------cccEEECcCCcccCcCCHHHhcCCCCCEEECCCC--
Confidence 99888888888887 88888888888887777655433 1555555555555544444555555555555554
Q ss_pred cCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccccc
Q 041878 277 VGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI 356 (773)
Q Consensus 277 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 356 (773)
.+++.+|. +..+++|++|+|++|++++.+|..+..+++|++|++++|+++|.+|..
T Consensus 232 ----------------------~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 232 ----------------------SLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp ----------------------EECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred ----------------------ceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 44433333 444555555555555555555555555666666666666666655554
Q ss_pred CCCCcCceeecCCcc
Q 041878 357 GNISGINQLDLSEND 371 (773)
Q Consensus 357 ~~l~~L~~L~L~~N~ 371 (773)
+.+++|+.|++++|+
T Consensus 288 ~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 GNLQRFDVSAYANNK 302 (313)
T ss_dssp TTGGGSCGGGTCSSS
T ss_pred ccccccChHHhcCCC
Confidence 556666666666665
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=384.36 Aligned_cols=197 Identities=30% Similarity=0.504 Sum_probs=165.4
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.++||+|+||+||+|++.+ .||||+++... ....++|.+|++++++++|||||+++|++. . +..++|||||+
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~-~~~~iVmEy~~ 114 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-K-DNLAIVTQWCE 114 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-S-SSCEEEEECCS
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-C-CeEEEEEEcCC
Confidence 457889999999999998753 69999997543 334578999999999999999999999983 3 46899999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc-cce
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN-TNV 694 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~ 694 (773)
+|+|.++++... ..+++.++..++.|||+||+||| +++||||||||+|||+++++.+||+|||+|+....... ...
T Consensus 115 gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH-~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~ 191 (307)
T 3omv_A 115 GSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH-AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp SCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred CCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence 999999998653 34899999999999999999999 89999999999999999999999999999987654322 233
Q ss_pred eeccCccccccccccCC---CCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKL---KNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....||+.|||||++.. ..|+.++|||||||++|||+||+.||...+
T Consensus 192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~ 241 (307)
T 3omv_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC
Confidence 45579999999998853 458999999999999999999999997654
No 11
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.9e-45 Score=386.17 Aligned_cols=214 Identities=24% Similarity=0.437 Sum_probs=176.7
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|.+.+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++|||||++++++. .++..|+||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-~~~~~yiVmEy 104 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-ENGSLYIVMDY 104 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEEC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-ECCEEEEEEeC
Confidence 45678999999999999986 479999999997542 334567999999999999999999999995 45689999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
++||+|.+++.... ...+++.+++.++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+....... .
T Consensus 105 ~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 181 (350)
T 4b9d_A 105 CEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVH-DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-L 181 (350)
T ss_dssp CTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH-HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH-H
T ss_pred CCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc-c
Confidence 99999999997653 334788899999999999999999 99999999999999999999999999999987654321 1
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhhh
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEW 757 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 757 (773)
....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+ ..+.+.++....+
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~~~~~~~i~~~~~ 242 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS---MKNLVLKIISGSF 242 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHHHTCC
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---HHHHHHHHHcCCC
Confidence 223469999999999999999999999999999999999999997644 4555566665554
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-44 Score=380.90 Aligned_cols=200 Identities=22% Similarity=0.306 Sum_probs=171.2
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
...++||+|+||+||+|... +|+.||||+++..... .+|+.++++++|||||++++++. .++..|+||||++|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~-~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR-EGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEE-ETTEEEEEECCCTT
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeccCC
Confidence 45678999999999999864 6899999999754332 46999999999999999999995 45589999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC-CeEEeecCCccccccccccc--
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT-NPRIADFGLSRLMTAAANTN-- 693 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~-~~kl~DfG~a~~~~~~~~~~-- 693 (773)
|+|.+++++.+ .+++..+..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+|+.........
T Consensus 135 g~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~ 210 (336)
T 4g3f_A 135 GSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLH-TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210 (336)
T ss_dssp CBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence 99999998764 3899999999999999999999 99999999999999999987 59999999998775443221
Q ss_pred --eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHH
Q 041878 694 --VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQ 747 (773)
Q Consensus 694 --~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~ 747 (773)
....+||+.|||||++.+..|+.++||||+||++|||+||+.||...+..++..
T Consensus 211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~ 266 (336)
T 4g3f_A 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266 (336)
T ss_dssp ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH
T ss_pred ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH
Confidence 123469999999999999999999999999999999999999998876665544
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=390.91 Aligned_cols=198 Identities=22% Similarity=0.387 Sum_probs=176.3
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|...+.||+|+||.||+|... +|+.||||++........+.+.+|+.+|++++|||||++++++.. .+..|+|||||+
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy~~ 231 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 231 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeCCC
Confidence 345688999999999999864 799999999987666667789999999999999999999999954 558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
||+|.++++.. .+++.++..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+....... ...
T Consensus 232 gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH-~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~ 305 (423)
T 4fie_A 232 GGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRK 305 (423)
T ss_dssp TEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CBC
T ss_pred CCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH-HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-ccc
Confidence 99999999764 2789999999999999999999 99999999999999999999999999999987654332 233
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
..+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 4579999999999999999999999999999999999999997654
No 14
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.6e-44 Score=368.10 Aligned_cols=194 Identities=27% Similarity=0.444 Sum_probs=166.9
Q ss_pred hhcccccccceEEEEEEeC-CCCEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECC---CCeEEEEEe
Q 041878 539 TAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP---KGEKLLVFD 612 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---~~~~~lV~e 612 (773)
..++||+|+||+||+|.+. ++..||+|++... .....+.|.+|++++++++|||||++++++... +...|+|||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 3467999999999999864 6889999999654 233456799999999999999999999998542 345799999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCEEeCC-CCCeEEeecCCccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN--MIHGNLTSSNVLLDE-KTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~--iiH~Dik~~NIll~~-~~~~kl~DfG~a~~~~~~ 689 (773)
||++|+|.+++++.. .+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+.....
T Consensus 110 y~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH-~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 110 LMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 999999999998764 3889999999999999999999 777 999999999999984 789999999999854322
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
.....+||+.|||||++.+ .|+.++|||||||++|||+||+.||...
T Consensus 186 ---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 186 ---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp ---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 2335679999999998864 6999999999999999999999999653
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.6e-44 Score=416.92 Aligned_cols=315 Identities=22% Similarity=0.324 Sum_probs=215.7
Q ss_pred cCHHHHHHHHHHHHhCCCCCCC--------cCCCCCCCCCCCCCCC---cceEee-CCCEEEEEcCCCCcccccCccccC
Q 041878 46 VTQADYQSLRAIKHDLIDPHGF--------LRSWNDSGVGACSGGW---AGIKCV-KGQVIAIQLPWRRLGGRISEKISQ 113 (773)
Q Consensus 46 ~~~~~~~~L~~~k~~~~~~~~~--------l~sW~~~~~~~c~~~w---~gv~c~-~~~v~~l~l~~~~l~~~i~~~l~~ 113 (773)
....|++||.+++.++.++... ..+|+. +.++|. | .||+|+ .++|+.|+|++++++|.+|+.+++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~--w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDM--WGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGG--TTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCccc--ccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhc
Confidence 3457999999999998755321 347964 566666 9 999995 479999999999999999999999
Q ss_pred CCCCcEEEccCCc-------------------------------------------------------------------
Q 041878 114 LHALRKLSLHDNL------------------------------------------------------------------- 126 (773)
Q Consensus 114 l~~L~~L~L~~n~------------------------------------------------------------------- 126 (773)
|++|++|+|++|.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 9999999999884
Q ss_pred -----------ccccCCCCCCCCCCCceEEcccCccCCC-----------------CCCCCC--CCCCCCEEEccCCCCC
Q 041878 127 -----------LAGPVPWSLGFLPNLRGVYLFNNRLSGS-----------------IPPSIG--NCPNLQTLDLSNNALI 176 (773)
Q Consensus 127 -----------l~~~~~~~l~~l~~L~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~Ls~N~l~ 176 (773)
++| +|..++++++|++|+|++|++++. +|..++ ++++|++|+|++|.+.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 445 788888888999999999888875 888888 8888999999888888
Q ss_pred CCCccccccccccceeeccccc-ccc-cCCccccCC------CccceeeccccccccccCC--cccccccCcccccceee
Q 041878 177 GAIPPSLANSTRLYRLNLSYNS-LLG-SIPLSLTRL------PSLSVLALQHNNLSGSVPN--NWGVLAGNKSYQLQFLN 246 (773)
Q Consensus 177 ~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~~~~~~L~~L~ 246 (773)
+.+|..++++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+++ .+|. .++.+. +|++|+
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~-----~L~~L~ 336 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMK-----KLGMLE 336 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCT-----TCCEEE
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCC-----CCCEEe
Confidence 8888888888888888888887 877 667666554 66777777777766 5665 554443 566666
Q ss_pred ccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccc-cceeccccccccccCcccccccc--cCceEEccCCC
Q 041878 247 LDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSK-LQKLDLSYNAIGGSFPVTFTNIT--SLVSLNLENNR 323 (773)
Q Consensus 247 L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N~ 323 (773)
+++|.++|.+| .++.+++|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|+.|++++|+
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCc
Confidence 66666665555 5555555555555555555 45555555555 555555555555 4444444332 45555555555
Q ss_pred CCCCcchhhc-------cccccccccccCcccccccccccCCCCcCceeecCCccCc
Q 041878 324 LGNKIPEGLE-------RLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFT 373 (773)
Q Consensus 324 l~~~~~~~l~-------~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (773)
+++.+|..+. .+++|++|++++|++++..+..+..+++|++|+|++|+++
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 5555554444 4444555555555544221122223444444444444444
No 16
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-43 Score=364.19 Aligned_cols=210 Identities=26% Similarity=0.429 Sum_probs=166.5
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||+||+|.. .+|+.||||+++... ......+.+|++++++++|||||++++++. .++..|+|||
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~ivmE 93 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDEIIMVIE 93 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEEe
Confidence 35678999999999999986 479999999997542 234567999999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+ +|+|.+++.+.+ .++...+..++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+.......
T Consensus 94 y~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH-~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~- 167 (275)
T 3hyh_A 94 YA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF- 167 (275)
T ss_dssp CC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred CC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc-
Confidence 99 689999998754 3899999999999999999999 99999999999999999999999999999987643322
Q ss_pred ceeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhhh
Q 041878 693 NVIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEEW 757 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 757 (773)
.....||+.|||||++.+..| ++++||||+||++|||+||+.||.+.+ ..+..+++....+
T Consensus 168 -~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~---~~~~~~~i~~~~~ 229 (275)
T 3hyh_A 168 -LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES---IPVLFKNISNGVY 229 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTCC
T ss_pred -cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcCCC
Confidence 234579999999999988776 589999999999999999999997543 4555556655544
No 17
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.1e-45 Score=377.98 Aligned_cols=211 Identities=24% Similarity=0.395 Sum_probs=172.1
Q ss_pred HHhhcccccccceEEEEEEeC----CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE----DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
|.+.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||++++++. .++..|+|
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~iv 104 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ-TEGKLYLI 104 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-ETTEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEE
Confidence 466789999999999999752 47889999997542 223457889999999999999999999995 45689999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||++||+|.+++++.+ .+++.++..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+......
T Consensus 105 mEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH-~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLH-SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp ECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999999998764 3899999999999999999999 9999999999999999999999999999998654332
Q ss_pred ccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhh
Q 041878 691 NTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 756 (773)
. ......||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+ ..+.+.++.+..
T Consensus 181 ~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~~~~~~~i~~~~ 242 (304)
T 3ubd_A 181 K-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD---RKETMTMILKAK 242 (304)
T ss_dssp C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHCC
T ss_pred c-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC---HHHHHHHHHcCC
Confidence 2 2234579999999999999999999999999999999999999997654 344445555443
No 18
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-43 Score=377.33 Aligned_cols=205 Identities=25% Similarity=0.412 Sum_probs=175.8
Q ss_pred HHHhhcccccccceEEEEEEeCC------CCEEEEEEecccCc-ccHHHHHHHHHHHHccCC-CceEEeEEEEECCCCeE
Q 041878 536 LCATAEIMGKSTYGTAYKATLED------GSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHH-PNLLALRAYYLGPKGEK 607 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~ 607 (773)
.+.+.+.||+|+||+||+|.+.. ++.||||+++.... ...++|.+|+++|++++| ||||+++|+|..+.+..
T Consensus 65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~ 144 (353)
T 4ase_A 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 144 (353)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEE
Confidence 34678899999999999998532 35799999976543 345679999999999976 89999999996666678
Q ss_pred EEEEeecCCCCHHHHHhhcCC-------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC
Q 041878 608 LLVFDFMPKGSLASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN 674 (773)
Q Consensus 608 ~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~ 674 (773)
++|||||++|+|.++++.... ...+++.++..++.|||+||+||| +++||||||||+|||+++++.
T Consensus 145 ~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH-~~~iiHRDLK~~NILl~~~~~ 223 (353)
T 4ase_A 145 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNV 223 (353)
T ss_dssp EEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh-hCCeecCccCccceeeCCCCC
Confidence 999999999999999986421 345899999999999999999999 999999999999999999999
Q ss_pred eEEeecCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 675 PRIADFGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 675 ~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+
T Consensus 224 vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 999999999876544332 2234468999999999999999999999999999999998 999998754
No 19
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-43 Score=368.22 Aligned_cols=195 Identities=29% Similarity=0.398 Sum_probs=160.0
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCC---eEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG---EKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~~lV~e~~ 614 (773)
.+.++||+|+||+||+|++ +|+.||||+++.... ....++.|+..+.+++|||||++++++..... ..++|||||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 3468899999999999998 489999999965432 22334556777778999999999999965432 579999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC--------CceecCCCCCCEEeCCCCCeEEeecCCcccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE--------NMIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~--------~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 686 (773)
++|+|.+++++.. ++|..+.+++.|+++||+||| +. +||||||||+|||++.++.+||+|||+|+..
T Consensus 84 ~~gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH-~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 84 EHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLH-MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHH-CCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHH-HhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999998743 799999999999999999999 54 8999999999999999999999999999876
Q ss_pred cccccc---ceeeccCccccccccccCCC------CCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 687 TAAANT---NVIATAGTLGYRAPELSKLK------NANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 687 ~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
...... ......||+.|||||++.+. .++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 544322 12235799999999988654 467899999999999999999876643
No 20
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.7e-42 Score=361.88 Aligned_cols=199 Identities=23% Similarity=0.414 Sum_probs=161.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCC---------
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG--------- 605 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--------- 605 (773)
|.+.+.||+|+||+||+|... +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.....
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 456789999999999999864 789999999975443 345678999999999999999999999854332
Q ss_pred --eEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCc
Q 041878 606 --EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLS 683 (773)
Q Consensus 606 --~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a 683 (773)
..|+||||+++|+|.++++........++..++.++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH-~~~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH-HCcCccccCcHHHeEECCCCcEEEccCccc
Confidence 36899999999999999988765555677788999999999999999 999999999999999999999999999999
Q ss_pred ccccccccc-----------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 684 RLMTAAANT-----------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 684 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
+........ .....+||+.|||||++.+..|+.++||||+||++|||++ ||..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 877543221 1223469999999999999999999999999999999996 7754
No 21
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.9e-40 Score=369.83 Aligned_cols=325 Identities=21% Similarity=0.234 Sum_probs=258.5
Q ss_pred CCCCCCCcceEeeC----------CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccC-CCCCCCCCCCceEE
Q 041878 77 GACSGGWAGIKCVK----------GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPV-PWSLGFLPNLRGVY 145 (773)
Q Consensus 77 ~~c~~~w~gv~c~~----------~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~ 145 (773)
..|.+.+..|.|.. .+++.|+|++|.+++..+..++++++|++|+|++|.+.+.+ +..|..+++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 34542233477843 46899999999999988999999999999999999998655 66799999999999
Q ss_pred cccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccc--cccccccceeecccccccccCCcc-ccCCCccceeeccccc
Q 041878 146 LFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPS--LANSTRLYRLNLSYNSLLGSIPLS-LTRLPSLSVLALQHNN 222 (773)
Q Consensus 146 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~--l~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~L~~N~ 222 (773)
|++|++++..|..|+++++|++|+|++|.+++.++.. +..+++|++|+|++|++++..|.. +.++++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999889999999999999999999999766555 899999999999999999887876 8899999999999999
Q ss_pred cccccCCccccccc-----------------------------CcccccceeeccccccccccCccCCC-----------
Q 041878 223 LSGSVPNNWGVLAG-----------------------------NKSYQLQFLNLDHNLIAGTIPVSLGK----------- 262 (773)
Q Consensus 223 l~~~~p~~~~~l~~-----------------------------~~~~~L~~L~L~~n~l~~~~~~~l~~----------- 262 (773)
+++..+..+..+.. ...++|++|++++|.+++..|..+..
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~ 245 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEe
Confidence 99888877765421 12246777777777776544433211
Q ss_pred ----------------------------CCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccC
Q 041878 263 ----------------------------LGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSL 314 (773)
Q Consensus 263 ----------------------------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 314 (773)
.++|+.|++++|++++..|..+..+++|++|+|++|++++..|..|..+++|
T Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 325 (455)
T 3v47_A 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHL 325 (455)
T ss_dssp CTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred eccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccC
Confidence 1467777777777777777777777778888888887777777777777778
Q ss_pred ceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecc
Q 041878 315 VSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYN 394 (773)
Q Consensus 315 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 394 (773)
++|+|++|++++..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|++++|
T Consensus 326 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 405 (455)
T 3v47_A 326 LKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405 (455)
T ss_dssp CEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC
Confidence 88888888777777777777777888888888777777777777777888888888777665566677777788888888
Q ss_pred cCCCCCc
Q 041878 395 NLSGSVP 401 (773)
Q Consensus 395 ~l~g~~p 401 (773)
+++|.+|
T Consensus 406 ~l~~~~~ 412 (455)
T 3v47_A 406 PWDCSCP 412 (455)
T ss_dssp CBCCCTT
T ss_pred CcccCCC
Confidence 8877777
No 22
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=361.14 Aligned_cols=210 Identities=24% Similarity=0.358 Sum_probs=173.7
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECC-----CCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-----KGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~~ 608 (773)
|.+.+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++... .+..|
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 35678999999999999986 479999999997543 23356788999999999999999999987532 35789
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+|||||+ |+|.+++.... .+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+....
T Consensus 136 ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH-~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMH-SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 9999995 78999998653 4899999999999999999999 99999999999999999999999999999987643
Q ss_pred cc---ccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHH
Q 041878 689 AA---NTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754 (773)
Q Consensus 689 ~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 754 (773)
.. .......+||+.|||||++.+. .|+.++||||+||++|||++|+.||.+.+. .+.+..++.
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~---~~~l~~I~~ 277 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY---VHQLQLIMM 277 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH---HHHHHHHHH
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH---HHHHHHHHH
Confidence 32 1223345799999999987764 579999999999999999999999976553 344444443
No 23
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.3e-40 Score=369.77 Aligned_cols=212 Identities=25% Similarity=0.356 Sum_probs=176.8
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHH---HHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEA---EAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
|.+.++||+|+||.||+|+.. +|+.||||++.... ......+.+ ++.+++.++|||||++++++. ..+..|+
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~-~~~~lyl 269 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSF 269 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-CSSEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE-ECCEEEE
Confidence 345789999999999999864 69999999996432 222333333 466677789999999999995 4559999
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||++||+|.+++.+.+. ++...+..++.||+.||+||| ++|||||||||+|||++.+|++||+|||+|+.....
T Consensus 270 VmEy~~GGdL~~~l~~~~~---l~E~~a~~y~~qIl~aL~yLH-~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EECCCCSCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH-HCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999999988643 899999999999999999999 999999999999999999999999999999876543
Q ss_pred cccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhh
Q 041878 690 ANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 756 (773)
. ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||.+.+..+..+..+.+....
T Consensus 346 ~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~ 410 (689)
T 3v5w_A 346 K---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410 (689)
T ss_dssp C---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC
T ss_pred C---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Confidence 2 234579999999999864 579999999999999999999999998876666655555554443
No 24
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=363.82 Aligned_cols=339 Identities=20% Similarity=0.195 Sum_probs=303.2
Q ss_pred CCcceEeeC-----------CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCc
Q 041878 82 GWAGIKCVK-----------GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNR 150 (773)
Q Consensus 82 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 150 (773)
.|..|.|.. ..++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 467888853 367899999999999889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCc
Q 041878 151 LSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNN 230 (773)
Q Consensus 151 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 230 (773)
+++..+..|+++++|++|+|++|.+++..+..+.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99777778899999999999999999888999999999999999999999988999999999999999999999655555
Q ss_pred ccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccc
Q 041878 231 WGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTN 310 (773)
Q Consensus 231 ~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 310 (773)
+..+. +|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|..+....+|++|+|++|++++..+..+..
T Consensus 172 l~~l~-----~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 246 (477)
T 2id5_A 172 LSHLH-----GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRH 246 (477)
T ss_dssp HTTCT-----TCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTT
T ss_pred hcccC-----CCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcC
Confidence 55444 8999999999999999999999999999999999988888887777789999999999999766678999
Q ss_pred cccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEE
Q 041878 311 ITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFN 390 (773)
Q Consensus 311 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 390 (773)
+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 326 (477)
T 2id5_A 247 LVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLI 326 (477)
T ss_dssp CTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEE
T ss_pred ccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEE
Confidence 99999999999999988888999999999999999999999999999999999999999999988888889999999999
Q ss_pred eecccCCCCCchh-hhccCCCCCCCCCCCCCCCCCC
Q 041878 391 VSYNNLSGSVPPL-LSKKFNSSSFVGNLQLCGYSPS 425 (773)
Q Consensus 391 ls~N~l~g~~p~~-~~~~~~~~~~~~n~~~c~~~~~ 425 (773)
|++|+|+|.++.. +........+.++...|+.|..
T Consensus 327 l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 327 LDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred ccCCCccCccchHhHHhhhhccccCccCceeCCchH
Confidence 9999999887643 2233333456677777776643
No 25
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.3e-39 Score=349.31 Aligned_cols=194 Identities=23% Similarity=0.406 Sum_probs=163.9
Q ss_pred HHhhcccccccceEEEEEEeC----CCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE----DGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.++||+|+||+||+|+.+ +++.||||++.... ...++.+|+++++++ +||||+++++++. ..+..|+||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~-~~~~~~lvm 99 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFR-KNDHVVIAM 99 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEE-ETTEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEE-ECCEEEEEE
Confidence 456789999999999999753 46789999986543 456788999999998 6999999999995 456999999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC-CCeEEeecCCcccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK-TNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~-~~~kl~DfG~a~~~~~~~ 690 (773)
||+++|+|.++++. +++.++..++.||+.||+||| ++|||||||||+|||++.+ +.+||+|||+|+......
T Consensus 100 E~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH-~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 100 PYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIH-QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp ECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred eCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHH-HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999999999853 788999999999999999999 9999999999999999877 789999999997653221
Q ss_pred c---------------------------cceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 691 N---------------------------TNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 691 ~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
. ......+||+.|||||++.+. .|+.++||||+||++|||+||+.||...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 1 112234699999999988764 5899999999999999999999999653
No 26
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=382.45 Aligned_cols=143 Identities=21% Similarity=0.171 Sum_probs=79.6
Q ss_pred CcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccC-CCCCCCCCCCceEEcccCccCCCCCCCCCC
Q 041878 83 WAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPV-PWSLGFLPNLRGVYLFNNRLSGSIPPSIGN 161 (773)
Q Consensus 83 w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 161 (773)
|..|.+...+++.|+|++|.+++..+..+.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++++..|..|++
T Consensus 16 L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~ 95 (844)
T 3j0a_A 16 LTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQG 95 (844)
T ss_dssp SSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCS
T ss_pred CCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccC
Confidence 5555554456667777777666665555666666666666655443333 455555555555555555555555555555
Q ss_pred CCCCCEEEccCCCCCCCCccc--cccccccceeecccccccccCC-ccccCCCccceeecccccccc
Q 041878 162 CPNLQTLDLSNNALIGAIPPS--LANSTRLYRLNLSYNSLLGSIP-LSLTRLPSLSVLALQHNNLSG 225 (773)
Q Consensus 162 l~~L~~L~Ls~N~l~~~~~~~--l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~ 225 (773)
+++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..+ ..+.++++|++|+|++|.+++
T Consensus 96 l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 96 LFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 555555555555555444433 5555555555555555554332 345555555555555554443
No 27
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4e-39 Score=366.59 Aligned_cols=211 Identities=23% Similarity=0.396 Sum_probs=181.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||+||+|... +|+.||+|++......+.+.+.+|+++|++++|||||++++++. ..+..++|||||+
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~~~iv~E~~~ 237 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMS 237 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-CSSEEEEEEECCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeecC
Confidence 456789999999999999864 79999999998766666778999999999999999999999995 5569999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC--CCeEEeecCCccccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK--TNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~--~~~kl~DfG~a~~~~~~~~~~ 693 (773)
||+|.+++.... ..+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+.... .
T Consensus 238 gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH-~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--~ 312 (573)
T 3uto_A 238 GGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--S 312 (573)
T ss_dssp CCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--E
T ss_pred CCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH-HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--c
Confidence 999999997542 34889999999999999999999 9999999999999999864 789999999998775433 2
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhh
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 756 (773)
.....||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+. .+.+.++....
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~---~~~~~~i~~~~ 372 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---DETLRNVKSCD 372 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHHHHHHTTC
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHHHHHHHhCC
Confidence 3345799999999999999999999999999999999999999976543 34444554443
No 28
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2e-37 Score=359.86 Aligned_cols=139 Identities=19% Similarity=0.168 Sum_probs=121.0
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|+++.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46888999999998888888999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccc-cCCccccCCCccceeeccccccccccCC
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLG-SIPLSLTRLPSLSVLALQHNNLSGSVPN 229 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 229 (773)
++|.+++..+..++++++|++|+|++|.+++ .+|..+.++++|++|++++|++++..+.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9999987776788889999999999998876 5688888888888888888888765554
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-37 Score=346.80 Aligned_cols=332 Identities=20% Similarity=0.199 Sum_probs=271.6
Q ss_pred CCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCC-
Q 041878 77 GACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSI- 155 (773)
Q Consensus 77 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~- 155 (773)
++|. .+..|... .++.++++++ .+|. +. ++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+.+
T Consensus 2 ~p~~---~~c~~~~~---~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~ 71 (455)
T 3v47_A 2 DPGT---SECSVIGY---NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR 71 (455)
T ss_dssp --------CCEEETT---EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC
T ss_pred CCcc---ceeEEEcc---ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC
Confidence 4565 35556432 3677777776 4554 32 78999999999999999999999999999999999998666
Q ss_pred CCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCcc--ccCCCccceeeccccccccccCCc-cc
Q 041878 156 PPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLS--LTRLPSLSVLALQHNNLSGSVPNN-WG 232 (773)
Q Consensus 156 p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~--l~~l~~L~~L~L~~N~l~~~~p~~-~~ 232 (773)
+..|.++++|++|+|++|.+++..|..+.++++|++|+|++|++++..+.. +.++++|++|+|++|++++..|.. +.
T Consensus 72 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 151 (455)
T 3v47_A 72 NNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL 151 (455)
T ss_dssp TTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG
T ss_pred cccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC
Confidence 567999999999999999999888999999999999999999999865554 899999999999999999887765 55
Q ss_pred ccccCcccccceeeccccccccccCccCCCC----------------------------------CCccEEECCCCcccC
Q 041878 233 VLAGNKSYQLQFLNLDHNLIAGTIPVSLGKL----------------------------------GLLQEISLSHNKIVG 278 (773)
Q Consensus 233 ~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l----------------------------------~~L~~L~L~~N~l~~ 278 (773)
.+. +|++|++++|.+++..+..+..+ ++|++|++++|++++
T Consensus 152 ~l~-----~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~ 226 (455)
T 3v47_A 152 NMR-----RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE 226 (455)
T ss_dssp GCT-----TCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH
T ss_pred CCC-----cccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc
Confidence 544 89999999999998888776554 578888888887765
Q ss_pred CCCCCcCc---------------------------------------ccccceeccccccccccCcccccccccCceEEc
Q 041878 279 PIPDELGK---------------------------------------LSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL 319 (773)
Q Consensus 279 ~~p~~l~~---------------------------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 319 (773)
..|..+.. .++|++|++++|.+++..|..+..+++|++|+|
T Consensus 227 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 306 (455)
T 3v47_A 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306 (455)
T ss_dssp HHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEEC
Confidence 33322211 157888888899998888888999999999999
Q ss_pred cCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCC
Q 041878 320 ENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGS 399 (773)
Q Consensus 320 s~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~ 399 (773)
++|++++..|..+..+++|++|+|++|++++..|..++++++|++|+|++|++++..|..+..+++|+.|+|++|++++.
T Consensus 307 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 307 AQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 99999988888999999999999999999988888999999999999999999988899999999999999999999975
Q ss_pred Cchhhh--ccCCCCCCCCCCCCCCCC
Q 041878 400 VPPLLS--KKFNSSSFVGNLQLCGYS 423 (773)
Q Consensus 400 ~p~~~~--~~~~~~~~~~n~~~c~~~ 423 (773)
.+..+. ..+....+.+|+..|.++
T Consensus 387 ~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 387 PDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CHhHhccCCcccEEEccCCCcccCCC
Confidence 544331 233344567777776554
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9e-38 Score=363.09 Aligned_cols=302 Identities=22% Similarity=0.299 Sum_probs=258.2
Q ss_pred CCEEEEEcCCCCcccc-----------------cCcccc--CCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCc-
Q 041878 91 GQVIAIQLPWRRLGGR-----------------ISEKIS--QLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNR- 150 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~-----------------i~~~l~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~- 150 (773)
.+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 5788999999999996 999999 99999999999999999999999999999999999998
Q ss_pred cCC-CCCCCCCCC------CCCCEEEccCCCCCCCCcc--ccccccccceeecccccccccCCccccCCCccceeecccc
Q 041878 151 LSG-SIPPSIGNC------PNLQTLDLSNNALIGAIPP--SLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHN 221 (773)
Q Consensus 151 l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 221 (773)
++| .+|..++.+ ++|++|+|++|.++ .+|. .++++++|++|+|++|+++|.+| .+..+++|++|+|++|
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSS
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCC
Confidence 998 899988876 99999999999999 8888 89999999999999999999999 8899999999999999
Q ss_pred ccccccCCcccccccCcccc-cceeeccccccccccCccCCCCC--CccEEECCCCcccCCCCCCcC-------cccccc
Q 041878 222 NLSGSVPNNWGVLAGNKSYQ-LQFLNLDHNLIAGTIPVSLGKLG--LLQEISLSHNKIVGPIPDELG-------KLSKLQ 291 (773)
Q Consensus 222 ~l~~~~p~~~~~l~~~~~~~-L~~L~L~~n~l~~~~~~~l~~l~--~L~~L~L~~N~l~~~~p~~l~-------~l~~L~ 291 (773)
+++ .+|..+..+. + |++|++++|.++ .+|..+..++ +|+.|++++|++++.+|..+. .+++|+
T Consensus 364 ~l~-~lp~~l~~l~-----~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~ 436 (636)
T 4eco_A 364 QIT-EIPANFCGFT-----EQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVS 436 (636)
T ss_dssp EEE-ECCTTSEEEC-----TTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEE
T ss_pred ccc-cccHhhhhhc-----ccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCC
Confidence 999 7888777665 6 999999999998 6777777655 899999999999888888887 778888
Q ss_pred eeccccccccccCcccccccccCceEEccCCCCCCCcchh-hccc-------cccccccccCcccccccccccC--CCCc
Q 041878 292 KLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEG-LERL-------QNLTVLNLKNNQFKGHIPETIG--NISG 361 (773)
Q Consensus 292 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~l-------~~L~~L~ls~N~l~~~~~~~~~--~l~~ 361 (773)
+|+|++|+++...+..+..+++|++|+|++|+++ .+|.. +... ++|+.|+|++|+++ .+|..+. .+++
T Consensus 437 ~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 514 (636)
T 4eco_A 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPY 514 (636)
T ss_dssp EEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTT
T ss_pred EEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCC
Confidence 9999999888544444566888888888888887 44443 3322 38888888888888 6777776 8888
Q ss_pred CceeecCCccCccCCCchhhccCccCEEEe------ecccCCCCCchhh
Q 041878 362 INQLDLSENDFTGEISPSLASLANLTSFNV------SYNNLSGSVPPLL 404 (773)
Q Consensus 362 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l------s~N~l~g~~p~~~ 404 (773)
|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+
T Consensus 515 L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l 562 (636)
T 4eco_A 515 LVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGI 562 (636)
T ss_dssp CCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTG
T ss_pred cCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHH
Confidence 8888888888887 7888888888888888 4577788888765
No 31
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=341.05 Aligned_cols=330 Identities=20% Similarity=0.183 Sum_probs=294.5
Q ss_pred ceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCC
Q 041878 85 GIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPN 164 (773)
Q Consensus 85 gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 164 (773)
+..|... ...++.++++++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.+++..|..|+++++
T Consensus 6 ~C~C~~~-~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 81 (477)
T 2id5_A 6 RCECSAQ-DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81 (477)
T ss_dssp TCEEETT-TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCeECCC-CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCcc
Confidence 5568542 235778888877 5666553 68999999999999998999999999999999999999988999999999
Q ss_pred CCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccce
Q 041878 165 LQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQF 244 (773)
Q Consensus 165 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~ 244 (773)
|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++..+..|..+. +|+.
T Consensus 82 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-----~L~~ 156 (477)
T 2id5_A 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-----SLEQ 156 (477)
T ss_dssp CCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCT-----TCCE
T ss_pred CCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCC-----CCCE
Confidence 99999999999976666789999999999999999999999999999999999999999988887777655 8999
Q ss_pred eeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCC
Q 041878 245 LNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRL 324 (773)
Q Consensus 245 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 324 (773)
|+|++|.+++..+..+..+++|+.|+|++|++.+..+..|..+++|++|++++|.+.+.+|.......+|++|+|++|++
T Consensus 157 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l 236 (477)
T 2id5_A 157 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL 236 (477)
T ss_dssp EEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCC
T ss_pred EECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcc
Confidence 99999999988888899999999999999999998888999999999999999998888888777778999999999999
Q ss_pred CCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhh
Q 041878 325 GNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLL 404 (773)
Q Consensus 325 ~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~ 404 (773)
+...+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+
T Consensus 237 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 316 (477)
T 2id5_A 237 TAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316 (477)
T ss_dssp CSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGB
T ss_pred cccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHc
Confidence 97777889999999999999999998888899999999999999999999999999999999999999999998665544
Q ss_pred h--ccCCCCCCCCCCCCCCCC
Q 041878 405 S--KKFNSSSFVGNLQLCGYS 423 (773)
Q Consensus 405 ~--~~~~~~~~~~n~~~c~~~ 423 (773)
. ..+....+.+|+..|.+.
T Consensus 317 ~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 317 HSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCGGGCCEEECCSSCEECSGG
T ss_pred CCCcccCEEEccCCCccCccc
Confidence 2 344555678898888654
No 32
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-36 Score=352.17 Aligned_cols=313 Identities=20% Similarity=0.210 Sum_probs=222.7
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEcc
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLS 171 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 171 (773)
.+..++++++.++...+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 45677888888876656668899999999999999999888999999999999999999999888899999999999999
Q ss_pred CCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccc
Q 041878 172 NNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNL 251 (773)
Q Consensus 172 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~ 251 (773)
+|.+++..+..|+++++|++|+|++|.+++..|..+.++++|++|+|++|.+++..+..+ ++|+.|++++|.
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l--------~~L~~L~l~~n~ 203 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLI--------PSLFHANVSYNL 203 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGC--------TTCSEEECCSSC
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhh--------hhhhhhhcccCc
Confidence 999996656667999999999999999999999999999999999999999986532222 245555555555
Q ss_pred ccc-------------------ccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccc
Q 041878 252 IAG-------------------TIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNIT 312 (773)
Q Consensus 252 l~~-------------------~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 312 (773)
+++ ..+.. .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++..|..|..++
T Consensus 204 l~~l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 278 (597)
T 3oja_B 204 LSTLAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 278 (597)
T ss_dssp CSEEECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred cccccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCcc
Confidence 443 22211 1356666666666654 24556666666666666666666666666666
Q ss_pred cCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEee
Q 041878 313 SLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVS 392 (773)
Q Consensus 313 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 392 (773)
+|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++. + +..+++|+.|+|+
T Consensus 279 ~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~ 353 (597)
T 3oja_B 279 RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLS 353 (597)
T ss_dssp SCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECC
T ss_pred CCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEee
Confidence 66666666666654 3445555666666666666666 4555556666666666666666543 2 4445566666666
Q ss_pred cccCCCCCchhhhccCCCCCCCCCCCCCCC
Q 041878 393 YNNLSGSVPPLLSKKFNSSSFVGNLQLCGY 422 (773)
Q Consensus 393 ~N~l~g~~p~~~~~~~~~~~~~~n~~~c~~ 422 (773)
+|+|+|.....+...+....+.++...|+.
T Consensus 354 ~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 354 HNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp SSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 666665544444344444455555555654
No 33
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-36 Score=332.72 Aligned_cols=286 Identities=20% Similarity=0.211 Sum_probs=190.1
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEcc
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLS 171 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 171 (773)
.++.++++++.++...+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 46678888888775444557899999999999999998888899999999999999999998888999999999999999
Q ss_pred CCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccc
Q 041878 172 NNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNL 251 (773)
Q Consensus 172 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~ 251 (773)
+|.++...+..+.++++|++|+|++|++++..+..+..+++|++|++++|++++... .. .++|+.|++++|.
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---~~-----l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL---SL-----IPSLFHANVSYNL 197 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCG---GG-----CTTCSEEECCSSC
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccc---cc-----ccccceeeccccc
Confidence 999995444557899999999999999998888899999999999999999986422 22 2256666666666
Q ss_pred cccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchh
Q 041878 252 IAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEG 331 (773)
Q Consensus 252 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 331 (773)
+++. ...++|++|++++|++... |.. ..++|++|++++|.+++. ..+..+++|++|+|++|++++..|..
T Consensus 198 l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~ 267 (390)
T 3o6n_A 198 LSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHP 267 (390)
T ss_dssp CSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred cccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhH
Confidence 5532 1223455555555554432 111 123455555555554432 23444455555555555554444444
Q ss_pred hccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCC
Q 041878 332 LERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 332 l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 397 (773)
+..+++|+.|++++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++
T Consensus 268 ~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~ 331 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331 (390)
T ss_dssp GTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred ccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc
Confidence 5555555555555555442 3333444455555555555544 33444444445555555555544
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-36 Score=348.62 Aligned_cols=163 Identities=17% Similarity=0.190 Sum_probs=139.4
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEcc
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLS 171 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 171 (773)
.++.|+|++|.+++..+..+.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 78999999999999889999999999999999999999989999999999999999999998888889999999999999
Q ss_pred CCCCCC-CCccccccccccceeecccccccccCC-ccccCCCccceeeccccccccccCCccccccc-------------
Q 041878 172 NNALIG-AIPPSLANSTRLYRLNLSYNSLLGSIP-LSLTRLPSLSVLALQHNNLSGSVPNNWGVLAG------------- 236 (773)
Q Consensus 172 ~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~------------- 236 (773)
+|.+++ ..|..+.++++|++|+|++|++.+.+| ..+.++++|++|++++|++++..|..++.+..
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 999986 457789999999999999998544554 67889999999999999999887776654321
Q ss_pred ------Ccccccceeecccccccc
Q 041878 237 ------NKSYQLQFLNLDHNLIAG 254 (773)
Q Consensus 237 ------~~~~~L~~L~L~~n~l~~ 254 (773)
..+++|++|++++|.+++
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cchhhHhhcccccEEEccCCcccc
Confidence 123467777777776665
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=329.01 Aligned_cols=212 Identities=22% Similarity=0.376 Sum_probs=169.8
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||+||+|.. .+|+.||||++.... ......+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-~~~~~~lv~E~~ 90 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE-TANKIFMVLEYC 90 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEE-eCCEEEEEEeCC
Confidence 34678999999999999986 579999999997543 233467899999999999999999999994 555899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||++++++.+||+|||++...........
T Consensus 91 ~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 166 (347)
T 3zgw_A 91 PGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVH-SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166 (347)
T ss_dssp TTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccc
Confidence 9999999998754 3889999999999999999999 99999999999999999999999999999887654443334
Q ss_pred eeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhh
Q 041878 695 IATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 756 (773)
....||+.|+|||++.+..+ +.++||||+||++|||++|+.||...+ ..+...++....
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~---~~~~~~~i~~~~ 226 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN---VMALYKKIMRGK 226 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTC
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcCC
Confidence 45579999999999987775 889999999999999999999997643 334444444443
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-36 Score=323.37 Aligned_cols=198 Identities=28% Similarity=0.432 Sum_probs=172.5
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lv~e~ 95 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-TEKTLYLIMEY 95 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCEEEEEEEC
Confidence 34578999999999999986 57999999999754 2334567889999999999999999999994 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++.+... ++...+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 96 ~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-- 169 (328)
T 3fe3_A 96 ASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCH-QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-- 169 (328)
T ss_dssp CTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG--
T ss_pred CCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH-HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc--
Confidence 999999999987643 789999999999999999999 99999999999999999999999999999986643322
Q ss_pred eeeccCccccccccccCCCCCC-cchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNAN-TKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~-~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.+..++ +++||||+||++|||++|+.||.+.+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 218 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence 2345699999999999877765 79999999999999999999997654
No 37
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.6e-36 Score=319.14 Aligned_cols=198 Identities=24% Similarity=0.424 Sum_probs=175.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|...+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++. ..+..++||||++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLA 100 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE-ECCEEEEEEECCC
Confidence 34568899999999999985 578999999998766666788999999999999999999999995 4558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
+|+|.+++.+. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........ ...
T Consensus 101 ~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 174 (297)
T 3fxz_A 101 GGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRS 174 (297)
T ss_dssp TCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBC
T ss_pred CCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH-hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-ccC
Confidence 99999999875 2788999999999999999999 89999999999999999999999999999887654332 223
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 220 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4569999999999999999999999999999999999999997643
No 38
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9.6e-36 Score=345.67 Aligned_cols=304 Identities=23% Similarity=0.245 Sum_probs=257.2
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEcc
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLS 171 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 171 (773)
.++.++++++.+++..+..+.++++|++|+|++|.++ .+|..+..+++|++|+|++|++++..|..++.+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 6888888888888877777888899999999998888 678888888899999999998887778888888999999999
Q ss_pred CCCCCCCCccc-cccccccceeecccccccccC--CccccCCCccceeeccccccccccCCcccccccCcccccceeecc
Q 041878 172 NNALIGAIPPS-LANSTRLYRLNLSYNSLLGSI--PLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLD 248 (773)
Q Consensus 172 ~N~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~ 248 (773)
+|.+.+.+|.. +..+++|++|++++|++++.. +..+..+++|++|++++|++++..|..+..+. +|++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-----~L~~L~l~ 408 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP-----QLELLDLA 408 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT-----TCSEEECT
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc-----cCCeEECC
Confidence 98888666554 888888999999999888665 77788888999999999988877777766554 78899999
Q ss_pred ccccccccCcc-CCCCCCccEEECCCCcccCCCCCCcCcccccceecccccccccc---CcccccccccCceEEccCCCC
Q 041878 249 HNLIAGTIPVS-LGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGS---FPVTFTNITSLVSLNLENNRL 324 (773)
Q Consensus 249 ~n~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l 324 (773)
+|.+++..+.. +..+++|++|++++|.+++..|..+..+++|++|++++|.+++. .+..+..+++|+.|++++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 99888776544 88888899999999988888888888888999999999988762 235688888899999999998
Q ss_pred CCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCch
Q 041878 325 GNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 325 ~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
++..|..+..+++|+.|++++|++++..|..+.++++| .|+|++|++++..|..+..+++|+.|++++|+++|.++.
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 88888888888999999999999888888888888888 899999999888888888888899999999998887773
No 39
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9.3e-36 Score=345.79 Aligned_cols=311 Identities=19% Similarity=0.176 Sum_probs=232.5
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
..++.|+|++|.+++..|..++++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46889999999999888889999999999999999999988999999999999999999999888999999999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCc------------
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNK------------ 238 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~------------ 238 (773)
++|.+++..+..+.++++|++|+|++|++++.....+..+++|++|++++|++++..|..++.+....
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999876677888899999999999988875444444588888888888887765554444332100
Q ss_pred ------------------------------------------------------------ccccceeeccccccccccCc
Q 041878 239 ------------------------------------------------------------SYQLQFLNLDHNLIAGTIPV 258 (773)
Q Consensus 239 ------------------------------------------------------------~~~L~~L~L~~n~l~~~~~~ 258 (773)
..+|+.|++++|.+++..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 00455566666666666666
Q ss_pred cCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcch-hhccccc
Q 041878 259 SLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPE-GLERLQN 337 (773)
Q Consensus 259 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~ 337 (773)
.|+.+++|++|++++|+++ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|. .+..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 6666777777777777776 5666677777777777777777766666677777777777777776655544 3666777
Q ss_pred cccccccCccccccc--ccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCch
Q 041878 338 LTVLNLKNNQFKGHI--PETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 338 L~~L~ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
|++|++++|.+++.. +..++.+++|++|++++|++.+..|..+..+++|+.|++++|++++..|.
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 418 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTC
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccc
Confidence 777777777776554 56667777777777777777766666777777777777777777665554
No 40
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.9e-37 Score=338.39 Aligned_cols=201 Identities=20% Similarity=0.299 Sum_probs=172.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.++||+|+||+||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++. ..+..++|||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-~~~~~~lV~E 154 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ-DDNNLYLVMD 154 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE-CSSEEEEEEC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-eCCEEEEEEe
Confidence 345689999999999999976 57889999996532 122334888999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++++. ...+++..+..++.||+.||+||| +.|||||||||+|||++.++.+||+|||+|+........
T Consensus 155 y~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH-~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~ 231 (437)
T 4aw2_A 155 YYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVH-QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231 (437)
T ss_dssp CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred cCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHH-hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc
Confidence 99999999999874 234899999999999999999999 999999999999999999999999999999876554443
Q ss_pred ceeeccCccccccccccC-----CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSK-----LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 232 ~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 334457999999999886 5678999999999999999999999997654
No 41
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.6e-36 Score=322.28 Aligned_cols=198 Identities=23% Similarity=0.366 Sum_probs=172.7
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEeccc---CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK---TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.++||+|+||.||+|... +|+.||+|+++.. .......+.+|+.++++++||||+++++++. ..+..++||||
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv~E~ 86 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEY 86 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-CSSEEEEEEEC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE-eCCEEEEEEeC
Confidence 45688999999999999865 6899999999754 2334667889999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 87 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-~ 161 (337)
T 1o6l_A 87 ANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-T 161 (337)
T ss_dssp CTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC-C
T ss_pred CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC-c
Confidence 99999999998754 3789999999999999999999 99999999999999999999999999999986433221 2
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 234568999999999999999999999999999999999999997644
No 42
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.5e-36 Score=316.07 Aligned_cols=200 Identities=23% Similarity=0.403 Sum_probs=168.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc---ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT---KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e 91 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-EDDCYYLVME 91 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-CSSEEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-eCCeEEEEEe
Confidence 456789999999999999864 689999999864432 23467899999999999999999999994 5558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++........
T Consensus 92 ~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 92 YIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAH-DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp CCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred CCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 999999999998764 3789999999999999999999 999999999999999999999999999999876544433
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||.+.+..++.++||||+|+++|||+||+.||...+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 3444569999999999999999999999999999999999999997643
No 43
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.1e-37 Score=335.07 Aligned_cols=198 Identities=21% Similarity=0.318 Sum_probs=171.1
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.++||+|+||.||+|... +++.||+|+++... ......+.+|+.+++.++||||+++++++. ..+..++||||
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lV~E~ 150 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-DDRYLYMVMEY 150 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeC
Confidence 45689999999999999875 68899999996531 223445788999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++++. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.........
T Consensus 151 ~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH-~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 151 MPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH-SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp CTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred CCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 9999999999764 2788999999999999999999 9999999999999999999999999999998765544333
Q ss_pred eeeccCccccccccccCCCC----CCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKN----ANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~----~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.... ++.++||||+||++|||++|+.||...+
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 277 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence 34567999999999987655 7899999999999999999999997654
No 44
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8e-36 Score=339.68 Aligned_cols=321 Identities=21% Similarity=0.246 Sum_probs=213.7
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.+++..+..+.++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 46788888888888877778888888888888888888888888888888888888888888 56666 7888888888
Q ss_pred cCCCCCC-CCccccccccccceeecccccccccCCccccCCCcc--ceeecccccc--ccccCCccccccc---------
Q 041878 171 SNNALIG-AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSL--SVLALQHNNL--SGSVPNNWGVLAG--------- 236 (773)
Q Consensus 171 s~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~~--------- 236 (773)
++|.+++ .+|..++++++|++|+|++|++++ ..+..+++| ++|++++|++ .+..|..+..+..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 8888886 467888888888888888888875 344555555 7777777776 5555544443210
Q ss_pred ------------C---------------------------------------------------------cccccceeec
Q 041878 237 ------------N---------------------------------------------------------KSYQLQFLNL 247 (773)
Q Consensus 237 ------------~---------------------------------------------------------~~~~L~~L~L 247 (773)
. ..++|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 0 0115666677
Q ss_pred cccccccccCccC-----------------------------------------------------CCCCCccEEECCCC
Q 041878 248 DHNLIAGTIPVSL-----------------------------------------------------GKLGLLQEISLSHN 274 (773)
Q Consensus 248 ~~n~l~~~~~~~l-----------------------------------------------------~~l~~L~~L~L~~N 274 (773)
++|.+++.+|..+ ..+++|++|++++|
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECC
Confidence 7777766666555 44556666666666
Q ss_pred cccCCCCCCcCcccccceeccccccccc--cCcccccccccCceEEccCCCCCCCcch-hhccccccccccccCcccccc
Q 041878 275 KIVGPIPDELGKLSKLQKLDLSYNAIGG--SFPVTFTNITSLVSLNLENNRLGNKIPE-GLERLQNLTVLNLKNNQFKGH 351 (773)
Q Consensus 275 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~ls~N~l~~~ 351 (773)
++++.+|..+..+++|++|+|++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|+.|++++|++++.
T Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp CCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred ccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 6666566666666666666666666664 3445566666666666666666654443 355566666666666666655
Q ss_pred cccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchh-hh--ccCCCCCCCCCCCCCC
Q 041878 352 IPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL-LS--KKFNSSSFVGNLQLCG 421 (773)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~--~~~~~~~~~~n~~~c~ 421 (773)
+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.. +. ..+....+.+|+..|.
T Consensus 415 ~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 415 IFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp GGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 555543 56666666666666 56665556666667777766666 34443 21 1122234455555553
No 45
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=343.80 Aligned_cols=163 Identities=19% Similarity=0.269 Sum_probs=115.6
Q ss_pred cCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCc-ccccccccCceEEccCCCCCCCcchhhccccc
Q 041878 259 SLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFP-VTFTNITSLVSLNLENNRLGNKIPEGLERLQN 337 (773)
Q Consensus 259 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 337 (773)
.+..+++|++|++++|++++..+ .+..+++|++|++++|.+++..+ ..+..+++|++|++++|++++..|..+..+++
T Consensus 368 ~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 446 (570)
T 2z63_A 368 SDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446 (570)
T ss_dssp HHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTT
T ss_pred cccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCc
Confidence 34444555555555555553322 26667777777777777776555 46777788888888888887777888888888
Q ss_pred cccccccCcccc-cccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhhh--ccCCCCCCC
Q 041878 338 LTVLNLKNNQFK-GHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLS--KKFNSSSFV 414 (773)
Q Consensus 338 L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~~~~~~~~~ 414 (773)
|++|++++|.++ +.+|..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++..|..+. ..+....+.
T Consensus 447 L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 526 (570)
T 2z63_A 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLH 526 (570)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEec
Confidence 888888888887 56788888888888888888888887788888888888888888888876665442 223334556
Q ss_pred CCCCCCCC
Q 041878 415 GNLQLCGY 422 (773)
Q Consensus 415 ~n~~~c~~ 422 (773)
+|+..|.+
T Consensus 527 ~N~~~~~~ 534 (570)
T 2z63_A 527 TNPWDCSC 534 (570)
T ss_dssp SSCBCCCT
T ss_pred CCcccCCC
Confidence 67666644
No 46
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-36 Score=321.39 Aligned_cols=201 Identities=36% Similarity=0.571 Sum_probs=165.9
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||+||+|.. +|+.||||++..... ...+++.+|++++++++||||+++++++ ...+..++||||+
T Consensus 39 y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-~~~~~~~lv~e~~ 116 (309)
T 3p86_A 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-TQPPNLSIVTEYL 116 (309)
T ss_dssp EEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSTTCCEEEEECC
T ss_pred ceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-EECCceEEEEecC
Confidence 45678999999999999987 588999999975532 3346789999999999999999999999 5555899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN--MIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~--iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
++|+|.+++........+++..+..++.||+.||+||| +.| |+||||||+||+++.++.+||+|||+++...... .
T Consensus 117 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-~ 194 (309)
T 3p86_A 117 SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-L 194 (309)
T ss_dssp TTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH-TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc-c
Confidence 99999999987543345899999999999999999999 888 9999999999999999999999999997654332 1
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp -------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2234568999999999999999999999999999999999999997654
No 47
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.8e-36 Score=320.09 Aligned_cols=203 Identities=35% Similarity=0.617 Sum_probs=177.3
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
...+.||+|+||.||+|.+.+|+.||||++........+.+.+|++++++++||||+++++++ ...+..++||||+++|
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~ 120 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENG 120 (321)
T ss_dssp SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC-CCTTCCEEEEECCTTC
T ss_pred CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-cCCCeEEEEEEcCCCC
Confidence 456789999999999999888999999999877666678899999999999999999999998 5556899999999999
Q ss_pred CHHHHHhhcCC-CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc-cee
Q 041878 618 SLASFLHARGP-ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT-NVI 695 (773)
Q Consensus 618 ~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~ 695 (773)
+|.+++..... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++........ ...
T Consensus 121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH-TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc-CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 99999876532 235899999999999999999999 899999999999999999999999999999865432221 222
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~ 246 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246 (321)
T ss_dssp CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS
T ss_pred ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc
Confidence 34589999999999888999999999999999999999999986543
No 48
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.4e-35 Score=338.80 Aligned_cols=325 Identities=23% Similarity=0.244 Sum_probs=258.4
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|..+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57889999999999888889999999999999999999998999999999999999999999 67766 8999999999
Q ss_pred cCCCCCC-CCccccccccccceeecccccccccCCccccCCCccceeecccccc--ccccCCcccccc------------
Q 041878 171 SNNALIG-AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNL--SGSVPNNWGVLA------------ 235 (773)
Q Consensus 171 s~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l--~~~~p~~~~~l~------------ 235 (773)
++|.+++ .+|..++++++|++|+|++|++++.....+.++ +|++|++++|++ ++..|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L-~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~ 207 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL-HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNS 207 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTS-CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhc-eeeEEEeecccccccccCcccccccCcceEEEEecCcc
Confidence 9999986 456899999999999999999986433333333 448899998888 666666554432
Q ss_pred ---------cC-------------------------------------------------------cccccceeeccccc
Q 041878 236 ---------GN-------------------------------------------------------KSYQLQFLNLDHNL 251 (773)
Q Consensus 236 ---------~~-------------------------------------------------------~~~~L~~L~L~~n~ 251 (773)
.. ...+|++|++++|.
T Consensus 208 ~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 287 (562)
T 3a79_B 208 LFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLT 287 (562)
T ss_dssp CCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEE
T ss_pred chhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccE
Confidence 00 00167777788888
Q ss_pred cccccCccC-----------------------------------------------------CCCCCccEEECCCCcccC
Q 041878 252 IAGTIPVSL-----------------------------------------------------GKLGLLQEISLSHNKIVG 278 (773)
Q Consensus 252 l~~~~~~~l-----------------------------------------------------~~l~~L~~L~L~~N~l~~ 278 (773)
+++.+|..+ ..+++|++|++++|++++
T Consensus 288 l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~ 367 (562)
T 3a79_B 288 ITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTD 367 (562)
T ss_dssp ECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCT
T ss_pred eeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcccc
Confidence 877766655 567888899999999988
Q ss_pred CCCCCcCcccccceeccccccccc--cCcccccccccCceEEccCCCCCCCcch-hhccccccccccccCcccccccccc
Q 041878 279 PIPDELGKLSKLQKLDLSYNAIGG--SFPVTFTNITSLVSLNLENNRLGNKIPE-GLERLQNLTVLNLKNNQFKGHIPET 355 (773)
Q Consensus 279 ~~p~~l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~ls~N~l~~~~~~~ 355 (773)
.+|..+..+++|++|+|++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|++|++++|++++.+|..
T Consensus 368 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 447 (562)
T 3a79_B 368 SVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRC 447 (562)
T ss_dssp TTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSS
T ss_pred chhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhh
Confidence 888888888999999999998886 3356788888999999999998875554 5778888888999988888777766
Q ss_pred cCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchh-hh--ccCCCCCCCCCCCCCCCC
Q 041878 356 IGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL-LS--KKFNSSSFVGNLQLCGYS 423 (773)
Q Consensus 356 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~--~~~~~~~~~~n~~~c~~~ 423 (773)
+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.. +. ..+....+.+|+..|.++
T Consensus 448 l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 448 LP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 54 68888999999888 67777778888999999999988 46654 31 223334566777776543
No 49
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=325.95 Aligned_cols=198 Identities=25% Similarity=0.385 Sum_probs=168.6
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEeccc---CcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEe
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK---TTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
.+.++||+|+||.||+|... +|+.||||+++.. .......+.+|+.+++.+ +||||+++++++. ..+..++|||
T Consensus 26 ~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-~~~~~~lv~E 104 (353)
T 3txo_A 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ-TPDRLFFVME 104 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred EEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-eCCEEEEEEe
Confidence 45689999999999999865 6899999999754 233456788899999988 6999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++++.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++...... .
T Consensus 105 ~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~-~ 179 (353)
T 3txo_A 105 FVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLH-DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-V 179 (353)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCHHHEEECCCCCEEEccccceeecccCC-c
Confidence 999999999998764 3889999999999999999999 9999999999999999999999999999997543222 2
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 2334569999999999998899999999999999999999999997654
No 50
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.9e-36 Score=315.60 Aligned_cols=200 Identities=28% Similarity=0.486 Sum_probs=174.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|...++||+|+||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++. ..+..++||||++
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~ 90 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-KDKRLNFITEYIK 90 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCT
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-cCCeeEEEEEecC
Confidence 345789999999999999874 68999999997766667788999999999999999999999995 4558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc--
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN-- 693 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~-- 693 (773)
+|+|.++++... ..+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.........
T Consensus 91 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 91 GGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLH-SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 999999998753 34899999999999999999999 9999999999999999999999999999998764332211
Q ss_pred -----------eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 694 -----------VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 694 -----------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
.....||+.|+|||++.+..++.++||||||+++|||++|..||...
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~ 225 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence 11346999999999999999999999999999999999999998763
No 51
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=332.16 Aligned_cols=200 Identities=19% Similarity=0.302 Sum_probs=172.4
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.++||+|+||.||+|... +|+.||||+++... ......+.+|+.++.+++||||+++++++.. .+..|+||||
T Consensus 64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~~~~~lVmE~ 142 (412)
T 2vd5_A 64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD-ENYLYLVMEY 142 (412)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC-SSEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEcC
Confidence 45688999999999999874 78999999996532 2223457889999999999999999999954 5589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++.+.+ ..+++..+..++.||+.||+||| +.||+||||||+|||++.++++||+|||+++.........
T Consensus 143 ~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH-~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 143 YVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVH-RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp CCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 99999999998753 24889999999999999999999 9999999999999999999999999999998765444333
Q ss_pred eeeccCccccccccccC-------CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSK-------LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~-------~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 274 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence 33457999999999886 4578999999999999999999999997654
No 52
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-36 Score=317.06 Aligned_cols=195 Identities=24% Similarity=0.414 Sum_probs=172.0
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.++||+|+||.||+|... +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++. ..+..++||||
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lv~e~ 87 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-CSSEEEEEECC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-eCCEEEEEEeC
Confidence 45689999999999999865 78999999997542 234567889999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---- 159 (318)
T 1fot_A 88 IEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLH-SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---- 159 (318)
T ss_dssp CCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC----
T ss_pred CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChheEEEcCCCCEEEeecCcceecCCc----
Confidence 99999999998753 3789999999999999999999 999999999999999999999999999999865432
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 207 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 223469999999999999999999999999999999999999997644
No 53
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.7e-36 Score=325.34 Aligned_cols=207 Identities=28% Similarity=0.439 Sum_probs=175.0
Q ss_pred HHHhhcccccccceEEEEEEeC--------CCCEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCC
Q 041878 536 LCATAEIMGKSTYGTAYKATLE--------DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKG 605 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 605 (773)
.|.+.+.||+|+||.||+|.+. ++..||||+++.... ...+++.+|+++++++ +||||+++++++ ...+
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~-~~~~ 160 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-TQDG 160 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE-CSSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-ccCC
Confidence 3466789999999999999852 345799999976533 3456799999999999 899999999999 4556
Q ss_pred eEEEEEeecCCCCHHHHHhhcCC-------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC
Q 041878 606 EKLLVFDFMPKGSLASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672 (773)
Q Consensus 606 ~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~ 672 (773)
..++||||+++|+|.++++.... ...+++..++.++.||+.||+||| +.||+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA-SQKCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCeeccccchhhEEECCC
Confidence 89999999999999999987542 235789999999999999999999 9999999999999999999
Q ss_pred CCeEEeecCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCC
Q 041878 673 TNPRIADFGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMD 744 (773)
Q Consensus 673 ~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~ 744 (773)
+.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...+..+
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~ 313 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 99999999999866543221 2223457889999999998999999999999999999999 999998755433
No 54
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.6e-36 Score=317.08 Aligned_cols=197 Identities=22% Similarity=0.376 Sum_probs=174.5
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
...++||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++.. .+..++||||+++
T Consensus 48 ~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~ 126 (321)
T 2c30_A 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-GEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEECCCCS
T ss_pred hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEecCCC
Confidence 34568999999999999876 799999999987766677889999999999999999999999954 4589999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
++|.+++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........ ....
T Consensus 127 ~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 200 (321)
T 2c30_A 127 GALTDIVSQV----RLNEEQIATVCEAVLQALAYLH-AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKS 200 (321)
T ss_dssp CBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCC
T ss_pred CCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-cccc
Confidence 9999998753 3899999999999999999999 89999999999999999999999999999887654322 2234
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~ 245 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 569999999999999999999999999999999999999997643
No 55
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.6e-36 Score=322.68 Aligned_cols=209 Identities=22% Similarity=0.355 Sum_probs=178.1
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.++||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++. ..+..++|||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lv~e 95 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ-DEEDMFMVVD 95 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEe
Confidence 356789999999999999865 68899999996432 334577889999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 169 (384)
T 4fr4_A 96 LLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQ-NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-- 169 (384)
T ss_dssp CCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC--
Confidence 999999999998753 3889999999999999999999 9999999999999999999999999999998764332
Q ss_pred ceeeccCccccccccccCC---CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q 041878 693 NVIATAGTLGYRAPELSKL---KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASI 752 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~---~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~ 752 (773)
......||+.|+|||++.. ..++.++||||+||++|||++|+.||.........+.+..+
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~ 232 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence 2334569999999999863 45899999999999999999999999876666555544443
No 56
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.1e-36 Score=321.93 Aligned_cols=198 Identities=26% Similarity=0.452 Sum_probs=173.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc------cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK------GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
|.+.+.||+|+||.||+|... +|+.||+|.++..... ..+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~l 92 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE-NRTDVVL 92 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-eCCEEEE
Confidence 356789999999999999865 6899999999754322 3578999999999999999999999994 4558999
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC----CeEEeecCCccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT----NPRIADFGLSRL 685 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~~ 685 (773)
||||+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++ .+||+|||++..
T Consensus 93 v~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 93 ILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999999997643 4899999999999999999999 99999999999999998877 799999999987
Q ss_pred cccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+
T Consensus 169 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~ 222 (361)
T 2yab_A 169 IEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222 (361)
T ss_dssp CCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred cCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 654322 234569999999999998999999999999999999999999997654
No 57
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5e-36 Score=321.05 Aligned_cols=198 Identities=24% Similarity=0.397 Sum_probs=171.7
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEe
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
.+.++||+|+||.||+|... +|+.||||+++... ......+..|..+++++ +||||+++++++.. .+..++|||
T Consensus 20 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~~lv~E 98 (345)
T 1xjd_A 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENLFFVME 98 (345)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEEEEEEe
Confidence 45689999999999999875 68899999997542 33456788899999887 89999999999954 558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.++++... .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++...... .
T Consensus 99 ~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~ 173 (345)
T 1xjd_A 99 YLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLH-SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-A 173 (345)
T ss_dssp CCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-C
T ss_pred CCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-C
Confidence 999999999998754 3789999999999999999999 9999999999999999999999999999997643222 1
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 2334579999999999999999999999999999999999999997654
No 58
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.1e-35 Score=342.57 Aligned_cols=328 Identities=21% Similarity=0.224 Sum_probs=248.0
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCC-----CCCC----CCCCC
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSG-----SIPP----SIGNC 162 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-----~~p~----~l~~l 162 (773)
.++.|+|++|.+++..+..++++++|++|+|++|.+++..|..+..+++|++|+|++|...+ .+|. .|+.+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 46777777777777777777777777777777777777666666666666666555544332 1221 45555
Q ss_pred CCCCEEEccCCCCCCCCccccccccccce----------------------------eecccccccccCCccccCCCccc
Q 041878 163 PNLQTLDLSNNALIGAIPPSLANSTRLYR----------------------------LNLSYNSLLGSIPLSLTRLPSLS 214 (773)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~----------------------------L~Ls~N~l~~~~~~~l~~l~~L~ 214 (773)
++|++|+|++|.+++..+..+.++++|++ |+|++|++++..|..+..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 66666666666666555555555544444 44455556666677777888888
Q ss_pred eeeccccccccccC-CcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCccc--CCCCCCcCcccccc
Q 041878 215 VLALQHNNLSGSVP-NNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIV--GPIPDELGKLSKLQ 291 (773)
Q Consensus 215 ~L~L~~N~l~~~~p-~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~ 291 (773)
.|+|++|++++.+| ..+..+ ++|++|++++|.+++..+..|..+++|+.|++++|.+. +.+|..|..+++|+
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l-----~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGL-----ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTC-----TTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred EEeCCCCcCccccCcccccCc-----ccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 88888888877665 344433 37888888888888888888888888888888888886 56788899999999
Q ss_pred eeccccccccccCcccccccccCceEEccCCCCCCCcc--------hhhccccccccccccCcccccccccccCCCCcCc
Q 041878 292 KLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIP--------EGLERLQNLTVLNLKNNQFKGHIPETIGNISGIN 363 (773)
Q Consensus 292 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 363 (773)
+|+|++|++++..+..|..+++|++|+|++|++++..+ ..+..+++|++|+|++|+++...+..|.++++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 99999999998888889999999999999999976422 2478899999999999999955556789999999
Q ss_pred eeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhhh---ccCCCCCCCCCCCCCCCCC
Q 041878 364 QLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLS---KKFNSSSFVGNLQLCGYSP 424 (773)
Q Consensus 364 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~---~~~~~~~~~~n~~~c~~~~ 424 (773)
.|+|++|++++..+..|..+++|+.|+|++|++++..|..+. ..+....+.+|++.|+++.
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999977777789999999999999999998776543 3455567889999997753
No 59
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.1e-36 Score=311.36 Aligned_cols=200 Identities=27% Similarity=0.485 Sum_probs=175.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
|.+.+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++ ...+..++||||+++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEH 89 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSSEEEEEECCTT
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEE-ecCCceEEEEEeCCC
Confidence 456789999999999999988889999999975443 457899999999999999999999999 455689999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.............
T Consensus 90 ~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 90 GCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE-EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp CBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHH-hCCeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 99999997643 34789999999999999999999 9999999999999999999999999999998765443333334
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..+|+.|+|||.+....++.++||||+|+++|||++ |+.||...+
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 457889999999988899999999999999999999 999997654
No 60
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.1e-35 Score=337.45 Aligned_cols=327 Identities=23% Similarity=0.270 Sum_probs=260.2
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..++++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 36777888888888777777888888888888888888777888888888888888888887766677888888888888
Q ss_pred cCCCCCC-CCccccccccccceeecccccccccCCccccC----------------------------------------
Q 041878 171 SNNALIG-AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTR---------------------------------------- 209 (773)
Q Consensus 171 s~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~---------------------------------------- 209 (773)
++|.+++ .+|..++++++|++|+|++|++++..+..+..
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~ 215 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNF 215 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCc
Confidence 8888775 45777888888888887777776544332211
Q ss_pred --------------------------------------------------------------------------------
Q 041878 210 -------------------------------------------------------------------------------- 209 (773)
Q Consensus 210 -------------------------------------------------------------------------------- 209 (773)
T Consensus 216 ~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 295 (606)
T 3vq2_A 216 NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295 (606)
T ss_dssp SCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESC
T ss_pred cchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCc
Confidence
Q ss_pred -----------------------------------------------------CCccceeecccccccccc--CCccccc
Q 041878 210 -----------------------------------------------------LPSLSVLALQHNNLSGSV--PNNWGVL 234 (773)
Q Consensus 210 -----------------------------------------------------l~~L~~L~L~~N~l~~~~--p~~~~~l 234 (773)
+++|++|++++|++++.. |..+.
T Consensus 296 ~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~-- 373 (606)
T 3vq2_A 296 SIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDL-- 373 (606)
T ss_dssp CCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHH--
T ss_pred cchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhc--
Confidence 112222222222222111 11111
Q ss_pred ccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCC-CCcCcccccceeccccccccccCccccccccc
Q 041878 235 AGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIP-DELGKLSKLQKLDLSYNAIGGSFPVTFTNITS 313 (773)
Q Consensus 235 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 313 (773)
.+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|++|++++|.+++..|..+..+++
T Consensus 374 ---~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 449 (606)
T 3vq2_A 374 ---GTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTS 449 (606)
T ss_dssp ---CCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTT
T ss_pred ---cCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCC
Confidence 23489999999999986 55889999999999999999998877 68999999999999999999999999999999
Q ss_pred CceEEccCCCCCC-CcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEee
Q 041878 314 LVSLNLENNRLGN-KIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVS 392 (773)
Q Consensus 314 L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 392 (773)
|++|++++|++++ .+|..+..+++|++|++++|++++..|..++++++|++|+|++|++++.+|..+..+++|+.|+|+
T Consensus 450 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 529 (606)
T 3vq2_A 450 LNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCS 529 (606)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECC
Confidence 9999999999988 478899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchhhhc---cCCCCCCCCCCCCCCCCC
Q 041878 393 YNNLSGSVPPLLSK---KFNSSSFVGNLQLCGYSP 424 (773)
Q Consensus 393 ~N~l~g~~p~~~~~---~~~~~~~~~n~~~c~~~~ 424 (773)
+|+++ .+|..+.. .+....+.+|+..|+++.
T Consensus 530 ~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 530 FNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999 57765422 234456789999998775
No 61
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.9e-36 Score=321.75 Aligned_cols=200 Identities=40% Similarity=0.691 Sum_probs=173.9
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|...++||+|+||.||+|...+|+.||||++..... .....+.+|++++++++||||+++++++ ...+..++||||++
T Consensus 32 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~ 110 (326)
T 3uim_A 32 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC-MTPTERLLVYPYMA 110 (326)
T ss_dssp SCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE-CCSSCCEEEEECCT
T ss_pred cccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE-ecCCceEEEEEecc
Confidence 345688999999999999988899999999975432 2344789999999999999999999999 45558899999999
Q ss_pred CCCHHHHHhhcCC-CCccCHHHHHHHHHHHHHHHHHhccCC---CceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 616 KGSLASFLHARGP-ETIVNWATRMSIAIGIARGLNYLHVEE---NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 616 ~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~yLH~~~---~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
+|+|.++++.... ...+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||+++.......
T Consensus 111 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 189 (326)
T 3uim_A 111 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 189 (326)
T ss_dssp TCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH-HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc
Confidence 9999999987642 345899999999999999999999 77 999999999999999999999999999987755444
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~ 738 (773)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||.
T Consensus 190 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 44445569999999999988889999999999999999999999996
No 62
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-35 Score=323.51 Aligned_cols=198 Identities=21% Similarity=0.392 Sum_probs=170.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc---ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT---KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.++||+|+||.||+|+.. +++.||+|+++.... .....+..|..+++++ +||||+++++++. ..+..++||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-~~~~~~lV~ 132 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVI 132 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-ECCEEEEEE
Confidence 356789999999999999875 578899999975432 2334678899999887 8999999999995 455899999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||+++|+|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 133 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH-~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 207 (396)
T 4dc2_A 133 EYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH-ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 207 (396)
T ss_dssp ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC-
Confidence 9999999999998754 3899999999999999999999 9999999999999999999999999999998633222
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 2233457999999999999999999999999999999999999999753
No 63
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-35 Score=319.10 Aligned_cols=195 Identities=23% Similarity=0.350 Sum_probs=172.2
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~ 122 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEEC
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEcC
Confidence 45688999999999999865 68999999996532 234567889999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++.+... ++...+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~--- 195 (350)
T 1rdq_E 123 VAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--- 195 (350)
T ss_dssp CTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB---
T ss_pred CCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH-HCCcccccCccceEEECCCCCEEEcccccceeccCCc---
Confidence 999999999987643 789999999999999999999 9999999999999999999999999999998764332
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 196 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 242 (350)
T 1rdq_E 196 -WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242 (350)
T ss_dssp -CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence 23468999999999999999999999999999999999999997644
No 64
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.2e-35 Score=311.25 Aligned_cols=210 Identities=29% Similarity=0.402 Sum_probs=175.8
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.++||+|+||+||+|...+|+.||+|++..... .....+.+|++++++++||||+++++++ ...+..++||||++
T Consensus 24 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-~~~~~~~lv~e~~~ 102 (311)
T 3niz_A 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-HSERCLTLVFEFME 102 (311)
T ss_dssp EEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-CCSSCEEEEEECCS
T ss_pred HhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-ccCCEEEEEEcCCC
Confidence 45689999999999999998899999999975432 2346788999999999999999999999 55568999999997
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
|+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....... ...
T Consensus 103 -~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 177 (311)
T 3niz_A 103 -KDLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYT 177 (311)
T ss_dssp -EEHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----
T ss_pred -CCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-ccc
Confidence 58888887653 34789999999999999999999 99999999999999999999999999999987643322 223
Q ss_pred eccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHH
Q 041878 696 ATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIV 753 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~ 753 (773)
...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.+..
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 236 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHH
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Confidence 4468999999998865 568999999999999999999999999877776666555543
No 65
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.2e-35 Score=319.25 Aligned_cols=198 Identities=23% Similarity=0.353 Sum_probs=171.8
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEeccc---CcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEe
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK---TTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
.+.++||+|+||.||+|... +|+.||||+++.. .......+..|..+++.+ +||+|+++++++. ..+..++|||
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-~~~~~~lv~E 101 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVME 101 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE-cCCEEEEEEe
Confidence 45689999999999999875 4788999999754 223456788999999988 7999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++++.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++...... .
T Consensus 102 ~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~ 176 (353)
T 2i0e_A 102 YVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-V 176 (353)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-C
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-c
Confidence 999999999998754 3889999999999999999999 9999999999999999999999999999998643222 1
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 225 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence 2334569999999999999999999999999999999999999997654
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=314.04 Aligned_cols=217 Identities=21% Similarity=0.354 Sum_probs=182.1
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCC-CeEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-GEKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~lV~e~~ 614 (773)
.+.++||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ...++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 45689999999999999875 58999999997543 334677889999999999999999999986544 3679999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe----CCCCCeEEeecCCcccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL----DEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll----~~~~~~kl~DfG~a~~~~~~~ 690 (773)
++++|.+++........+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|||+++......
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~ 170 (319)
T 4euu_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170 (319)
T ss_dssp TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC
T ss_pred CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC
Confidence 99999999987654445899999999999999999999 9999999999999999 778889999999998765443
Q ss_pred ccceeeccCccccccccccC--------CCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC-CChHHHHHHHHHhhh
Q 041878 691 NTNVIATAGTLGYRAPELSK--------LKNANTKTDVYSLGVIILELLTGKSPGEPMNG-MDLPQWVASIVKEEW 757 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~-~~~~~~~~~~~~~~~ 757 (773)
. .....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ....+.+.+++...+
T Consensus 171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 171 Q--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp C--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred c--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 2 22346899999999875 57889999999999999999999999987543 345566666665543
No 67
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2e-35 Score=319.31 Aligned_cols=199 Identities=28% Similarity=0.406 Sum_probs=172.4
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
.|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~lv~e 108 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFD 108 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEe
Confidence 3567789999999999999864 68999999997543 234567889999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC---CeEEeecCCccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGLSRLMTAA 689 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~a~~~~~~ 689 (773)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||++.++ .+||+|||++......
T Consensus 109 ~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH-~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 109 LVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred cCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 999999999997643 4789999999999999999999 99999999999999998654 5999999999876533
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 185 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 234 (362)
T 2bdw_A 185 EA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 234 (362)
T ss_dssp CS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 22 234569999999999998899999999999999999999999997654
No 68
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=318.30 Aligned_cols=204 Identities=25% Similarity=0.473 Sum_probs=171.3
Q ss_pred HHHHhhcccccccceEEEEEEeC----CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 535 LLCATAEIMGKSTYGTAYKATLE----DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
-+|.+.++||+|+||.||+|.+. .+..||||+++... ....+.+.+|+.++++++||||+++++++ ...+..++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~l 127 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGRLAMI 127 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CGGGCCEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-EeCCccEE
Confidence 34567789999999999999874 34469999997653 33456799999999999999999999999 45558899
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++|+|.++++... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLS-DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 999999999999997652 34899999999999999999999 999999999999999999999999999999876544
Q ss_pred cccc--eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 690 ANTN--VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 690 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
.... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~ 260 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH
Confidence 3222 122346778999999988899999999999999999999 9999976543
No 69
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8e-35 Score=339.74 Aligned_cols=333 Identities=21% Similarity=0.206 Sum_probs=264.0
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
..++.|||++|.+++..+..|.++++|++|+|++|+|++..+.+|.++++|++|+|++|+|++..+..|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999877889999999999999999999888889999999999999999999777788999999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccc-cCCccccCCCccceeeccccccccccCCccccccc-------------
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLG-SIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAG------------- 236 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~------------- 236 (773)
++|++++..+..|+++++|++|+|++|.+++ ..|..+..+++|++|+|++|++++..+..+..+..
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999997777789999999999999999986 46888999999999999999987655443321100
Q ss_pred --------------------------------------------------------------------------------
Q 041878 237 -------------------------------------------------------------------------------- 236 (773)
Q Consensus 237 -------------------------------------------------------------------------------- 236 (773)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred ---------------------------------CcccccceeeccccccccccCc-------------------cCCCCC
Q 041878 237 ---------------------------------NKSYQLQFLNLDHNLIAGTIPV-------------------SLGKLG 264 (773)
Q Consensus 237 ---------------------------------~~~~~L~~L~L~~n~l~~~~~~-------------------~l~~l~ 264 (773)
....+|+.|++.+|.+.+..+. ....++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 0001233344444433322111 112345
Q ss_pred CccEEECCCCccc-------------------------------------------------CCC-CCCcCcccccceec
Q 041878 265 LLQEISLSHNKIV-------------------------------------------------GPI-PDELGKLSKLQKLD 294 (773)
Q Consensus 265 ~L~~L~L~~N~l~-------------------------------------------------~~~-p~~l~~l~~L~~L~ 294 (773)
+|+.|++++|.+. ... +..+..+++++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 5666666666542 111 13355667778888
Q ss_pred cccccccccCcccccccccCceEEccCCCC-CCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCc
Q 041878 295 LSYNAIGGSFPVTFTNITSLVSLNLENNRL-GNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFT 373 (773)
Q Consensus 295 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (773)
++.|.+.+..+..+..+++|+.|+|++|++ .+..|..+..+++|++|+|++|++++..|..|.++++|++|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 888888888888888899999999999974 4457788999999999999999999989999999999999999999999
Q ss_pred cCCCchhhccCccCEEEeecccCCCCCchhhhc---cCCCCCCCCCCCCCCCC
Q 041878 374 GEISPSLASLANLTSFNVSYNNLSGSVPPLLSK---KFNSSSFVGNLQLCGYS 423 (773)
Q Consensus 374 ~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---~~~~~~~~~n~~~c~~~ 423 (773)
+..|..+..+++|+.|+|++|+|++..|..+.. .+....+.+|+..|+|.
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 988899999999999999999999988876632 23344677898888664
No 70
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=313.74 Aligned_cols=199 Identities=26% Similarity=0.435 Sum_probs=173.7
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc------ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT------KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
.|.+.+.||+|+||.||+|... +|+.||+|.+..... ...+++.+|+.++++++||||+++++++. ..+..+
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~ 90 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-NKTDVI 90 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEE
Confidence 3567789999999999999865 689999999975432 24678999999999999999999999995 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC----CeEEeecCCcc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT----NPRIADFGLSR 684 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~ 684 (773)
+||||+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHH-HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999997643 4889999999999999999999 99999999999999999887 79999999998
Q ss_pred ccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 685 LMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 685 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....... .....||+.|+|||++....++.++||||+||++|||++|+.||....
T Consensus 167 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 221 (326)
T 2y0a_A 167 KIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221 (326)
T ss_dssp ECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred ECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 7653322 233469999999999998999999999999999999999999997644
No 71
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.5e-35 Score=316.16 Aligned_cols=199 Identities=25% Similarity=0.423 Sum_probs=162.9
Q ss_pred HHhhcccccccceEEEEEEe----CCCCEEEEEEecccC----cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATL----EDGSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
|.+.++||+|+||.||+|.. .+|+.||+|+++... ......+.+|+.++++++||||+++++++. ..+..+
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~ 97 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ-TGGKLY 97 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE-CSSCEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE-cCCEEE
Confidence 45678999999999999986 478999999997542 233456788999999999999999999995 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||+++|+|.+++.... .++...+..++.||+.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 98 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH-~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 98 LILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLH-QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHH-hCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 9999999999999998754 3788899999999999999999 89999999999999999999999999999875433
Q ss_pred ccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 174 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 174 DGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 221 2233468999999999998999999999999999999999999997644
No 72
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.3e-35 Score=316.10 Aligned_cols=279 Identities=17% Similarity=0.238 Sum_probs=179.6
Q ss_pred cccCHHHHHHHHHHHHhCC-CCCCCcCCCC---CCCCCCCCCCCcceEeeC----------CCEEEEEcCCCCcccccCc
Q 041878 44 VIVTQADYQSLRAIKHDLI-DPHGFLRSWN---DSGVGACSGGWAGIKCVK----------GQVIAIQLPWRRLGGRISE 109 (773)
Q Consensus 44 ~~~~~~~~~~L~~~k~~~~-~~~~~l~sW~---~~~~~~c~~~w~gv~c~~----------~~v~~l~l~~~~l~~~i~~ 109 (773)
..+..+|++||++||.++. ||.+++.+|. ....++|. |.|+.|.. .+|+.|+|++++++ .+|+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~--~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET--RTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC--SHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc--cCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 3456789999999999984 8888899994 33455565 99999941 45666666666665 5566
Q ss_pred cccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCcccccccccc
Q 041878 110 KISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRL 189 (773)
Q Consensus 110 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 189 (773)
.+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+...
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~--- 173 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST--- 173 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE---
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc---
Confidence 6666666666666666666 55666666666666666666666 556666666666666666666555555554430
Q ss_pred ceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEE
Q 041878 190 YRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEI 269 (773)
Q Consensus 190 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 269 (773)
..+..+.++++|++|+|++|+++ .+|..++.+. +|++|+|++|.+++ +|..++.+++|++|
T Consensus 174 ------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~-----~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 174 ------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQ-----NLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp ------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCT-----TCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred ------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCC-----CCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 00001122445555555555554 4444443332 45555555555553 34456666777777
Q ss_pred ECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccc
Q 041878 270 SLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFK 349 (773)
Q Consensus 270 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~ 349 (773)
+|++|++.+.+|..+..+++|++|+|++|.+.+.+|..+..+++|++|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777766554
No 73
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-35 Score=315.60 Aligned_cols=208 Identities=21% Similarity=0.333 Sum_probs=176.4
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
.+.+.||+|+||+||+|... +++.||+|.+.... .....+.+|+.++++++||||+++++++. ..+..++||||+++
T Consensus 8 ~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~g 85 (321)
T 1tki_A 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE-SMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE-ETTEEEEEECCCCC
T ss_pred EeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEe-cCCEEEEEEEeCCC
Confidence 45688999999999999865 67889999987443 34567899999999999999999999994 45589999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC--CCCeEEeecCCccccccccccce
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE--KTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
|+|.+++.... ..+++..+..++.||+.||.||| +.||+||||||+||+++. ++.+||+|||++....... ..
T Consensus 86 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH-~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--~~ 160 (321)
T 1tki_A 86 LDIFERINTSA--FELNEREIVSYVHQVCEALQFLH-SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--NF 160 (321)
T ss_dssp CBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--EE
T ss_pred CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--cc
Confidence 99999997642 34889999999999999999999 999999999999999997 7899999999998765432 22
Q ss_pred eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHh
Q 041878 695 IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKE 755 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~ 755 (773)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...+. .+.+..+...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~ 218 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---QQIIENIMNA 218 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHHT
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHHcC
Confidence 345689999999999988899999999999999999999999976543 3444444443
No 74
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=323.03 Aligned_cols=199 Identities=19% Similarity=0.285 Sum_probs=169.6
Q ss_pred HHHhhcccccccceEEEEEE------eCCCCEEEEEEecccCcccHHHHHHHHHHHHccC---CCceEEeEEEEECCCCe
Q 041878 536 LCATAEIMGKSTYGTAYKAT------LEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH---HPNLLALRAYYLGPKGE 606 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 606 (773)
.|.+.++||+|+||+||+|. ..+++.||||+++.. ...++..|++++++++ |+|++++++++.. .+.
T Consensus 66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~~ 141 (365)
T 3e7e_A 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QNG 141 (365)
T ss_dssp EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SSC
T ss_pred EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CCC
Confidence 34567899999999999994 456889999999654 3567788888888887 9999999999954 458
Q ss_pred EEEEEeecCCCCHHHHHhhcC--CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC-----------CC
Q 041878 607 KLLVFDFMPKGSLASFLHARG--PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE-----------KT 673 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~-----------~~ 673 (773)
.++||||+++|+|.+++.... ....+++..++.++.||+.||+||| +.|||||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH-~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh-hCCeecCCCCHHHEEecccccCccccccccC
Confidence 899999999999999997532 2345899999999999999999999 899999999999999998 89
Q ss_pred CeEEeecCCcccccccc-ccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 674 NPRIADFGLSRLMTAAA-NTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 674 ~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
.+||+|||+|+...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 99999999997654222 2233455799999999999999999999999999999999999999865
No 75
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-35 Score=307.98 Aligned_cols=200 Identities=22% Similarity=0.443 Sum_probs=175.8
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
|.+.+.||+|+||.||+|...++..||+|+++.... ..+++.+|++++++++||||+++++++ ...+..++||||+++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-SKEYPIYIVTEYISN 87 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSEEEEEECCTT
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-ccCCceEEEEEccCC
Confidence 456789999999999999998888999999975443 457799999999999999999999999 556689999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.............
T Consensus 88 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 88 GCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLE-SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp CBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH-HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 99999998753 34889999999999999999999 9999999999999999999999999999998765544333344
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||...+
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 457788999999988889999999999999999999 999997644
No 76
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3e-35 Score=315.51 Aligned_cols=197 Identities=22% Similarity=0.395 Sum_probs=171.1
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.++||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++++ +||||+++++++. ..+..++||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-~~~~~~lv~ 89 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVI 89 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEE
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE-eCCEEEEEE
Confidence 345689999999999999875 68899999997543 22345688899999988 8999999999995 455899999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||+++|+|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.......
T Consensus 90 e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH-ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred eCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 9999999999998754 3889999999999999999999 99999999999999999999999999999986432221
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 166 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 166 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 23345799999999999999999999999999999999999999975
No 77
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-35 Score=320.03 Aligned_cols=199 Identities=23% Similarity=0.382 Sum_probs=174.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||.||+|... +|+.||+|.+..........+.+|++++++++||||+++++++. .....++||||++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~lv~E~~~ 131 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLS 131 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-CSSEEEEEEECCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-eCCEEEEEEEcCC
Confidence 456789999999999999865 68999999998766556678999999999999999999999995 4558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC--CCCeEEeecCCccccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE--KTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+|+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+|||++. ++.+||+|||+++.......
T Consensus 132 gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-- 206 (387)
T 1kob_A 132 GGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMH-EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-- 206 (387)
T ss_dssp CCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--
T ss_pred CCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH-hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc--
Confidence 999999987642 34899999999999999999999 999999999999999974 46799999999987654322
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 254 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC
Confidence 234469999999999999999999999999999999999999997654
No 78
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.4e-35 Score=314.04 Aligned_cols=210 Identities=18% Similarity=0.238 Sum_probs=179.1
Q ss_pred HhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 538 ATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.+.||+|+||.||+|.. .+|+.||||.+..... ..++.+|+++++++ +||||+++++++.. .+..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~~- 87 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLELL- 87 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEECC-
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEEeC-
Confidence 4568999999999999986 5789999999865432 34688999999999 89999999999854 55889999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC-----eEEeecCCcccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN-----PRIADFGLSRLMTAAA 690 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~-----~kl~DfG~a~~~~~~~ 690 (773)
+++|.+++... ...+++..+..++.||+.||+||| +.||+||||||+|||++.++. +||+|||+++......
T Consensus 88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH-~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 88 GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVH-SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99999999875 235899999999999999999999 999999999999999999887 9999999998764433
Q ss_pred cc------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHH
Q 041878 691 NT------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVK 754 (773)
Q Consensus 691 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 754 (773)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+..+.+.++..
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~ 234 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 234 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh
Confidence 21 12345699999999999999999999999999999999999999998877777666665543
No 79
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.7e-35 Score=326.79 Aligned_cols=202 Identities=27% Similarity=0.511 Sum_probs=174.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.+.+.||+|+||.||+|.+. |+.||||+++... ..++|.+|++++++++||||+++++++....+..++||||+++
T Consensus 195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~ 271 (450)
T 1k9a_A 195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 271 (450)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence 356789999999999999886 7899999997543 4678999999999999999999999987666689999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
|+|.++++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 272 g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~~ 345 (450)
T 1k9a_A 272 GSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DT 345 (450)
T ss_dssp CBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc----cC
Confidence 99999998764 234688999999999999999999 9999999999999999999999999999998543221 12
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCChHH
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~~~ 747 (773)
..+++.|+|||.+.+..++.++|||||||++|||+| |+.||...+..+..+
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~ 397 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 397 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 257889999999999999999999999999999998 999998766555443
No 80
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8e-36 Score=332.74 Aligned_cols=200 Identities=28% Similarity=0.476 Sum_probs=173.8
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.+.+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++||||+++++++. .+..++||||+++
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAK 266 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECCCTT
T ss_pred eEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEeecCC
Confidence 35678999999999999999888999999997644 35788999999999999999999999984 4478999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
|+|.++++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++............
T Consensus 267 g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 267 GSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE-QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp CBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 99999998542 123688899999999999999999 8999999999999999999999999999998765433222233
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..+|+.|+|||++....++.++|||||||++|||+| |+.||...+
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~ 390 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC
Confidence 456789999999988899999999999999999999 999997654
No 81
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.5e-35 Score=309.57 Aligned_cols=201 Identities=20% Similarity=0.414 Sum_probs=173.1
Q ss_pred HHHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.|.+.+.||+|+||+||+|.+.++..||+|+++.... ..+++.+|++++++++||||+++++++ ...+..++||||++
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-TKQRPIFIITEYMA 102 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSSEEEEECCCT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-ecCCCeEEEEeccC
Confidence 3466789999999999999998888999999975543 457899999999999999999999999 55568999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
+++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+............
T Consensus 103 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 103 NGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 999999998642 23899999999999999999999 999999999999999999999999999999876544333333
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
...+|+.|+|||.+....++.++||||+|+++|||+| |+.||...+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 4457889999999988899999999999999999998 999997654
No 82
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.7e-35 Score=330.09 Aligned_cols=208 Identities=26% Similarity=0.391 Sum_probs=178.0
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEeccc---CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK---TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
...++||+|+||.||+|... +|+.||||++... .......+.+|++++++++||||+++++++. ..+..++||||
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-~~~~l~lVmEy 265 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-eCCEEEEEEEc
Confidence 45688999999999999875 7999999999653 2234567889999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++|+|.+++.... ...+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++...... .
T Consensus 266 ~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH-~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~--~ 341 (576)
T 2acx_A 266 MNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLH-RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--T 341 (576)
T ss_dssp CCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--C
T ss_pred CCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH-HCCEeccCCchheEEEeCCCCeEEEecccceecccCc--c
Confidence 99999999998754 234899999999999999999999 8999999999999999999999999999998764332 2
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVA 750 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 750 (773)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.....+.+.
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~ 398 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHH
Confidence 234579999999999998899999999999999999999999998765544333333
No 83
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-35 Score=313.54 Aligned_cols=196 Identities=24% Similarity=0.422 Sum_probs=169.8
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++. ..+..++|||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lv~E 89 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-TPTDIVMVIE 89 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEE
Confidence 34578999999999999986 578999999996432 223467899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+ +|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||++++++.+||+|||++........
T Consensus 90 ~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~- 163 (336)
T 3h4j_B 90 YA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCH-RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF- 163 (336)
T ss_dssp CC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT-
T ss_pred CC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc-
Confidence 99 789999987754 3889999999999999999999 89999999999999999999999999999987654332
Q ss_pred ceeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
.....||+.|+|||++.+..+ ++++||||+||++|||++|+.||...
T Consensus 164 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 164 -LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp -TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred -cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 233469999999999987776 78999999999999999999999764
No 84
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.5e-35 Score=313.21 Aligned_cols=200 Identities=25% Similarity=0.411 Sum_probs=170.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCC---------
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG--------- 605 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--------- 605 (773)
|.+.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++.....
T Consensus 8 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3qd2_B 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE 87 (332)
T ss_dssp EEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred CceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence 456789999999999999975 79999999997543 3346789999999999999999999999854321
Q ss_pred -----------------------------------------------eEEEEEeecCCCCHHHHHhhcCCCCccCHHHHH
Q 041878 606 -----------------------------------------------EKLLVFDFMPKGSLASFLHARGPETIVNWATRM 638 (773)
Q Consensus 606 -----------------------------------------------~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 638 (773)
..++||||+++|+|.+++.+.......++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 167 (332)
T 3qd2_B 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167 (332)
T ss_dssp --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence 379999999999999999987665667788889
Q ss_pred HHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc-----------cceeeccCcccccccc
Q 041878 639 SIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN-----------TNVIATAGTLGYRAPE 707 (773)
Q Consensus 639 ~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-----------~~~~~~~gt~~y~aPE 707 (773)
.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....... .......||+.|+|||
T Consensus 168 ~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 168 HIFIQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHHH-hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 99999999999999 99999999999999999999999999999987654421 1122346999999999
Q ss_pred ccCCCCCCcchhhHHHHHHHHHHHcCCCCC
Q 041878 708 LSKLKNANTKTDVYSLGVIILELLTGKSPG 737 (773)
Q Consensus 708 ~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~ 737 (773)
.+.+..++.++||||+||++|||++|..|+
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 999899999999999999999999998775
No 85
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-35 Score=315.80 Aligned_cols=199 Identities=31% Similarity=0.441 Sum_probs=168.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCC---CeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK---GEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~~~~lV~e~ 613 (773)
|.+.++||+|+||+||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ...++||||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred chhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 456789999999999999876 7899999996543 23455677999999999999999999996543 247999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC----------CceecCCCCCCEEeCCCCCeEEeecCCc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE----------NMIHGNLTSSNVLLDEKTNPRIADFGLS 683 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~----------~iiH~Dik~~NIll~~~~~~kl~DfG~a 683 (773)
+++|+|.++++... +++..+..++.||+.||+||| +. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH-~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 104 HEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLH-EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp CTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHT-CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHH-hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999998643 899999999999999999999 87 9999999999999999999999999999
Q ss_pred ccccccccc-ceeeccCccccccccccCC-----CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 684 RLMTAAANT-NVIATAGTLGYRAPELSKL-----KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 684 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+...
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 243 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence 876543322 2223468999999999876 3556789999999999999999999987543
No 86
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.3e-35 Score=324.13 Aligned_cols=200 Identities=26% Similarity=0.361 Sum_probs=171.5
Q ss_pred HHHhhcccccccceEEEEEEe-CCCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 536 LCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
.|.+.+.||+|+||+||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++. ..+..++|||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lv~E 90 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-EEGHHYLIFD 90 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-CSSEEEEEEC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-ECCEEEEEEE
Confidence 355678999999999999986 4788999999975432 34567899999999999999999999994 5568999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC---CCCCeEEeecCCccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD---EKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~---~~~~~kl~DfG~a~~~~~~ 689 (773)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||++ .++.+||+|||++......
T Consensus 91 ~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH-~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 91 LVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred eCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 999999999998753 3889999999999999999999 99999999999999998 4578999999999876543
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 167 ~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~ 217 (444)
T 3soa_A 167 QQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217 (444)
T ss_dssp CC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred Cc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc
Confidence 32 2234569999999999999999999999999999999999999997654
No 87
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=318.59 Aligned_cols=208 Identities=25% Similarity=0.386 Sum_probs=172.8
Q ss_pred hcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCCCC
Q 041878 540 AEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGS 618 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~g~ 618 (773)
.++||+|+||.||+|.. .+|+.||+|+++.......+++.+|++++++++||||+++++++. ..+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeCCCCCc
Confidence 46799999999999986 468999999998776666788999999999999999999999995 4558999999999999
Q ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe--CCCCCeEEeecCCccccccccccceee
Q 041878 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL--DEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 619 L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll--~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+|||+ +.++.+||+|||+++....... ...
T Consensus 173 L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~ 247 (373)
T 2x4f_A 173 LFDRIIDES--YNLTELDTILFMKQICEGIRHMH-QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKV 247 (373)
T ss_dssp EHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCC
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--ccc
Confidence 999987642 34789999999999999999999 9999999999999999 5677899999999987654332 223
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhh
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 756 (773)
..||+.|+|||++....++.++|||||||++|||++|+.||...+ ..+.+.++....
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~---~~~~~~~i~~~~ 304 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN---DAETLNNILACR 304 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHHHHHTC
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhcc
Confidence 469999999999998899999999999999999999999997654 334444555443
No 88
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-35 Score=315.02 Aligned_cols=256 Identities=33% Similarity=0.547 Sum_probs=150.4
Q ss_pred CCCcEEEccCCcccc--cCCCCCCCCCCCceEEccc-CccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccce
Q 041878 115 HALRKLSLHDNLLAG--PVPWSLGFLPNLRGVYLFN-NRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYR 191 (773)
Q Consensus 115 ~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 191 (773)
.+++.|+|++|.+++ .+|..++.+++|++|+|++ |++.+.+|..|+++++|++|+|++|.+++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 456677777777766 6666666666666666663 6666666666666666666666666666666666666666666
Q ss_pred eecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCC-CccEEE
Q 041878 192 LNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLG-LLQEIS 270 (773)
Q Consensus 192 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~ 270 (773)
|+|++|++++.+|..+..+++|++|+|++|++++.+| ..++.++ +|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-----------------------------~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP-----------------------------DSYGSFSKLFTSMT 180 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC-----------------------------GGGGCCCTTCCEEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCC-----------------------------HHHhhhhhcCcEEE
Confidence 6666666665555555555555555555555544333 3344444 566666
Q ss_pred CCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccc
Q 041878 271 LSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKG 350 (773)
Q Consensus 271 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~ 350 (773)
+++|++++.+|..+..++ |++|++++|.+++..|..+..+++|+.|+|++|++++.+|. +.
T Consensus 181 L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~----------------- 241 (313)
T 1ogq_A 181 ISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VG----------------- 241 (313)
T ss_dssp CCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CC-----------------
T ss_pred CcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-cc-----------------
Confidence 666666666666666554 66666666666666666666666666666666665544333 44
Q ss_pred ccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhh-hccCCCCCCCCCCCCCCCCCC
Q 041878 351 HIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLL-SKKFNSSSFVGNLQLCGYSPS 425 (773)
Q Consensus 351 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~~~~~n~~~c~~~~~ 425 (773)
.+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|... ...+....+.+|+++||.|++
T Consensus 242 -------~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 242 -------LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp -------CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred -------ccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 44455555555555555555555555555555555555555554431 123334455566667776554
No 89
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.7e-34 Score=339.73 Aligned_cols=306 Identities=23% Similarity=0.272 Sum_probs=256.0
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|+++.+++..+..++++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999888888999999999999999999999999999999999999999999666667999999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++..|..++++++|++|+|++|.+++..+..+.++++|++|++++|++++..+..+... ..++|++|++++|
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~---~~~~L~~L~L~~n 181 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIF---ANSSLKKLELSSN 181 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGG---TTCEESEEECTTC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhcc---ccccccEEECCCC
Confidence 9999997777889999999999999999999889999999999999999999987766555432 1347999999999
Q ss_pred ccccccCccCCCC---------------------------CCccEEECCCCcccCCCCCCcCcccc--cceecccccccc
Q 041878 251 LIAGTIPVSLGKL---------------------------GLLQEISLSHNKIVGPIPDELGKLSK--LQKLDLSYNAIG 301 (773)
Q Consensus 251 ~l~~~~~~~l~~l---------------------------~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~ 301 (773)
.+++..|..+..+ ++|+.|++++|++++..|..|..++. |++|++++|+++
T Consensus 182 ~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~ 261 (680)
T 1ziw_A 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLN 261 (680)
T ss_dssp CCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCC
T ss_pred cccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcC
Confidence 9998888776654 45677777788888777778877755 888888888888
Q ss_pred ccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccc-----cccc----ccCCCCcCceeecCCccC
Q 041878 302 GSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKG-----HIPE----TIGNISGINQLDLSENDF 372 (773)
Q Consensus 302 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~-----~~~~----~~~~l~~L~~L~L~~N~l 372 (773)
+..|..|..+++|++|++++|++++..|..+..+++|+.|++++|...+ .+|. .+..+++|++|++++|.+
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l 341 (680)
T 1ziw_A 262 VVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDI 341 (680)
T ss_dssp EECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCB
T ss_pred ccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCcc
Confidence 7777888888888888888888888788888888888888888776553 2232 677788888888888888
Q ss_pred ccCCCchhhccCccCEEEeecccCCCC
Q 041878 373 TGEISPSLASLANLTSFNVSYNNLSGS 399 (773)
Q Consensus 373 ~~~~~~~~~~l~~L~~L~ls~N~l~g~ 399 (773)
++..+..+..+++|+.|++++|.+++.
T Consensus 342 ~~~~~~~~~~l~~L~~L~Ls~n~~~~~ 368 (680)
T 1ziw_A 342 PGIKSNMFTGLINLKYLSLSNSFTSLR 368 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECTTCBSCCC
T ss_pred CCCChhHhccccCCcEEECCCCchhhh
Confidence 887777788888888888888876543
No 90
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.1e-35 Score=313.97 Aligned_cols=202 Identities=25% Similarity=0.375 Sum_probs=172.7
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEeccc-----CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK-----TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
.|.+.+.||+|+||+||+|... +|+.||||++... .....+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~l 103 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-SDGMLYM 103 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEE
Confidence 4667899999999999999864 6899999998642 1224678999999999999999999999995 4558999
Q ss_pred EEeecCCCCHHHHHhhcC-CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC---eEEeecCCccc
Q 041878 610 VFDFMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN---PRIADFGLSRL 685 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~ 685 (773)
||||+++|+|.+++.... ....+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +||+|||++..
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 999999999998886542 2334789999999999999999999 999999999999999987655 99999999987
Q ss_pred cccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 183 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 183 LGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp CCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred ecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 654322 223456999999999999899999999999999999999999999763
No 91
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.9e-35 Score=320.86 Aligned_cols=202 Identities=24% Similarity=0.484 Sum_probs=161.3
Q ss_pred HHHhhcccccccceEEEEEEeC----CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE----DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
.+.+.++||+|+||.||+|.+. ++..||||+++... ....++|.+|+.++++++||||+++++++ ...+..++|
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv 124 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-TKSKPVMIV 124 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSSCEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-eeCCceEEE
Confidence 3456789999999999999864 57789999997653 33456799999999999999999999999 455689999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++|+|.++++... ..+++.++..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLS-DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 99999999999998653 34899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ccc--eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 691 NTN--VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 691 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
... .....+++.|+|||++....++.++|||||||++|||++ |+.||...+
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~ 255 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 211 112235778999999998999999999999999999998 999997654
No 92
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-35 Score=319.08 Aligned_cols=199 Identities=26% Similarity=0.382 Sum_probs=163.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc---ccHHHHHHHHHH-HHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT---KGQKEFEAEAAA-IGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.++||+|+||.||+|+.. +++.||||+++.... .....+..|..+ ++.++||||+++++++.. .+..|+||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~lv~ 118 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVL 118 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEEEE
Confidence 356789999999999999875 588999999976432 234456667776 577899999999999954 55899999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||+++|+|.+++++.. .++...+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 119 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 119 DYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLH-SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 9999999999998754 3788899999999999999999 9999999999999999999999999999998643222
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 243 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 22334579999999999999999999999999999999999999997644
No 93
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.2e-34 Score=307.74 Aligned_cols=206 Identities=25% Similarity=0.409 Sum_probs=163.3
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|++++++++||||+++++++ ...+..++||||+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-HTENKLTLVFEFM 85 (317)
T ss_dssp ------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-CCTTEEEEEEECC
T ss_pred eeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-EECCeEEEEEEec
Confidence 566789999999999999864 689999999975433 3456788999999999999999999999 5566899999999
Q ss_pred CCCCHHHHHhhcC---CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 615 PKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 615 ~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
+ |+|.+++.... ....+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 7 69999987642 1234889999999999999999999 99999999999999999999999999999987643322
Q ss_pred cceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChH
Q 041878 692 TNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLP 746 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~ 746 (773)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+..
T Consensus 164 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 218 (317)
T 2pmi_A 164 -TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218 (317)
T ss_dssp -CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 1223468999999998865 46899999999999999999999999876544333
No 94
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.8e-36 Score=325.23 Aligned_cols=201 Identities=26% Similarity=0.442 Sum_probs=171.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
+.+.+.||+|+||.||+|.+. +++.||||.++.... ....+|.+|++++++++||||+++++++ ...+..++||||+
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-~~~~~~~lv~e~~ 194 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-TQKQPIYIVMELV 194 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-CSSSSCEEEEECC
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-ecCCCcEEEEEcC
Confidence 456789999999999999976 789999999975433 2345788999999999999999999999 5556899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
++|+|.++++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 195 ~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 195 QGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp TTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 9999999998653 34789999999999999999999 99999999999999999999999999999986543221111
Q ss_pred -eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 695 -IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 695 -~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
....+++.|+|||.+....++.++|||||||++|||+| |+.||...+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 12235678999999988889999999999999999998 999997654
No 95
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-34 Score=326.14 Aligned_cols=201 Identities=26% Similarity=0.409 Sum_probs=174.5
Q ss_pred hhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 539 TAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
..++||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-~~~~l~lVmE~~ 267 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE-TKTDLCLVMTIM 267 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCC
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-eCCEEEEEEEec
Confidence 4578999999999999875 69999999996542 234567889999999999999999999985 455899999999
Q ss_pred CCCCHHHHHhhcCC-CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 615 PKGSLASFLHARGP-ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 615 ~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
++|+|.+++..... ...+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH-~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~ 345 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-K 345 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-C
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH-HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-c
Confidence 99999999986532 335899999999999999999999 99999999999999999999999999999987654322 2
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~ 394 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc
Confidence 2334799999999999999999999999999999999999999987644
No 96
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.8e-35 Score=332.99 Aligned_cols=205 Identities=31% Similarity=0.478 Sum_probs=176.8
Q ss_pred HHhhcccccccceEEEEEEeCC-CCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
+.+.++||+|+||.||+|.+.. +..||||.++... ...++|.+|+.++++++||||+++++++ ...+..++||||++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~E~~~ 299 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMT 299 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSCEEEEECCT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEE-ecCCcEEEEEEccC
Confidence 4567899999999999999764 7899999997543 3467899999999999999999999999 45568999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
+|+|.++++... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...........
T Consensus 300 ~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 300 YGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLE-KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 999999998754 344889999999999999999999 999999999999999999999999999999876543332223
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCh
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~ 745 (773)
...+++.|+|||++....++.++|||||||++|||+| |+.||...+..++
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~ 428 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 3446789999999988899999999999999999999 9999987654433
No 97
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=329.36 Aligned_cols=302 Identities=22% Similarity=0.273 Sum_probs=255.4
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCC-CCCCCCCCCCCCCEEE
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSG-SIPPSIGNCPNLQTLD 169 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~ 169 (773)
.+++.|+|++|.+++..|..++++++|++|+|++|.|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 57889999999999988999999999999999999999 46655 89999999999999997 5789999999999999
Q ss_pred ccCCCCCCCCcccccccccc--ceeecccccc--cccCCccccCCC----------------------------------
Q 041878 170 LSNNALIGAIPPSLANSTRL--YRLNLSYNSL--LGSIPLSLTRLP---------------------------------- 211 (773)
Q Consensus 170 Ls~N~l~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~~~~l~~l~---------------------------------- 211 (773)
|++|.+++ ..+..+++| ++|+|++|.+ .+..|..+..+.
T Consensus 122 L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 198 (520)
T 2z7x_B 122 LSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198 (520)
T ss_dssp EEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE
T ss_pred ecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc
Confidence 99999875 345666666 7777777777 555555544422
Q ss_pred -------------------------------------------------ccceeeccccccccccCCcc-----cccc--
Q 041878 212 -------------------------------------------------SLSVLALQHNNLSGSVPNNW-----GVLA-- 235 (773)
Q Consensus 212 -------------------------------------------------~L~~L~L~~N~l~~~~p~~~-----~~l~-- 235 (773)
+|++|++++|+++|.+|..+ +.+.
T Consensus 199 ~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L 278 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL 278 (520)
T ss_dssp ECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE
T ss_pred ccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee
Confidence 56666666677766666554 1100
Q ss_pred -----------------------------------------cCcccccceeeccccccccccCccCCCCCCccEEECCCC
Q 041878 236 -----------------------------------------GNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHN 274 (773)
Q Consensus 236 -----------------------------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N 274 (773)
...+++|++|++++|.+++..|..++.+++|++|+|++|
T Consensus 279 ~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 358 (520)
T 2z7x_B 279 SIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMN 358 (520)
T ss_dssp EEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSS
T ss_pred EeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCC
Confidence 035568999999999999999999999999999999999
Q ss_pred cccC--CCCCCcCcccccceeccccccccccCcc-cccccccCceEEccCCCCCCCcchhhccccccccccccCcccccc
Q 041878 275 KIVG--PIPDELGKLSKLQKLDLSYNAIGGSFPV-TFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGH 351 (773)
Q Consensus 275 ~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~ 351 (773)
++++ .+|..+..+++|++|++++|.+++.+|. .+..+++|++|++++|++++..|..+. ++|+.|++++|+++ .
T Consensus 359 ~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ 435 (520)
T 2z7x_B 359 QLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-S 435 (520)
T ss_dssp CCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-C
T ss_pred ccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-c
Confidence 9997 5667899999999999999999985665 488899999999999999988887665 79999999999999 8
Q ss_pred cccccCCCCcCceeecCCccCccCCCch-hhccCccCEEEeecccCCCCCch
Q 041878 352 IPETIGNISGINQLDLSENDFTGEISPS-LASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
+|..+..+++|++|+|++|+++ .+|.. +..+++|+.|++++|+++|.++.
T Consensus 436 ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 436 IPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 8888889999999999999999 46655 89999999999999999998874
No 98
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-34 Score=301.14 Aligned_cols=198 Identities=20% Similarity=0.326 Sum_probs=173.6
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
+|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~ 88 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELC 88 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCeEEEEEecc
Confidence 3566789999999999999865 57789999998776667888999999999999999999999995 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCccccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 89 TGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCH-KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 9999999998754 3789999999999999999999 9999999999999999 7888999999999987654332
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+ .++.++||||+|+++|||++|+.||...+
T Consensus 165 --~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (277)
T 3f3z_A 165 --MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT 211 (277)
T ss_dssp --BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence 233468999999998865 48999999999999999999999997644
No 99
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=347.86 Aligned_cols=325 Identities=24% Similarity=0.253 Sum_probs=202.6
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCC--CCCCCCCceEEcccCccCCCCC-CCCCCCCCCCEE
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWS--LGFLPNLRGVYLFNNRLSGSIP-PSIGNCPNLQTL 168 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~--l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L 168 (773)
+++.|+|++|.+++..|..++++++|++|+|++|.+++.+|.. ++.+++|++|+|++|.+++..+ ..|+++++|++|
T Consensus 74 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L 153 (844)
T 3j0a_A 74 NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSI 153 (844)
T ss_dssp TCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEE
T ss_pred CCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEE
Confidence 4556666666666655666666666666666666666544443 5666666666666666655443 345666666666
Q ss_pred EccCCCCCCCCccccccc--cc------------------------------cceeecccc-------------------
Q 041878 169 DLSNNALIGAIPPSLANS--TR------------------------------LYRLNLSYN------------------- 197 (773)
Q Consensus 169 ~Ls~N~l~~~~~~~l~~l--~~------------------------------L~~L~Ls~N------------------- 197 (773)
+|++|.+++..+..+..+ ++ |++|+|++|
T Consensus 154 ~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l 233 (844)
T 3j0a_A 154 DFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQA 233 (844)
T ss_dssp EEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCB
T ss_pred ECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccc
Confidence 666666554444333322 11 222222222
Q ss_pred -------------------------------------------cccccCCccccCCCccceeeccccccccccCCccccc
Q 041878 198 -------------------------------------------SLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVL 234 (773)
Q Consensus 198 -------------------------------------------~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 234 (773)
.+.+..+..+..+++|+.|+|++|++++..|..|..+
T Consensus 234 ~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 313 (844)
T 3j0a_A 234 FSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGL 313 (844)
T ss_dssp SEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTC
T ss_pred cceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCC
Confidence 2222223333344444444444444444444444333
Q ss_pred ccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccC----------
Q 041878 235 AGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSF---------- 304 (773)
Q Consensus 235 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~---------- 304 (773)
. +|++|+|++|.+++..+..|..+++|+.|++++|++.+..+..|..+++|++|+|++|.+++..
T Consensus 314 ~-----~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l 388 (844)
T 3j0a_A 314 D-----NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFL 388 (844)
T ss_dssp S-----SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEE
T ss_pred C-----CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhcc
Confidence 2 5666666666666666666666666666666666666555555666666666666666654311
Q ss_pred --------c----------------------ccccccccCceEEccCCCCCCC---------------------------
Q 041878 305 --------P----------------------VTFTNITSLVSLNLENNRLGNK--------------------------- 327 (773)
Q Consensus 305 --------~----------------------~~~~~l~~L~~L~Ls~N~l~~~--------------------------- 327 (773)
| ..+..+++|+.|+|++|++++.
T Consensus 389 ~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~ 468 (844)
T 3j0a_A 389 SGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWE 468 (844)
T ss_dssp ESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCC
T ss_pred CCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccc
Confidence 0 0012345555555555555422
Q ss_pred ---cchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhh
Q 041878 328 ---IPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLL 404 (773)
Q Consensus 328 ---~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~ 404 (773)
.+..+..+++|+.|+|++|++++..|..+.++++|+.|+|++|++++..+..+. ++|+.|+|++|+|++.+|..+
T Consensus 469 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~ 546 (844)
T 3j0a_A 469 TELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF 546 (844)
T ss_dssp SCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC
T ss_pred cccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh
Confidence 223467789999999999999999999999999999999999999987777665 899999999999999998766
Q ss_pred hccCCCCCCCCCCCCCCCCC
Q 041878 405 SKKFNSSSFVGNLQLCGYSP 424 (773)
Q Consensus 405 ~~~~~~~~~~~n~~~c~~~~ 424 (773)
..+....+.+|+..|+++.
T Consensus 547 -~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 547 -VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp -SSCCEEEEEEECCCCSSSC
T ss_pred -CCcCEEEecCCCccccccc
Confidence 4556667889999997764
No 100
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=330.87 Aligned_cols=162 Identities=22% Similarity=0.321 Sum_probs=146.4
Q ss_pred ccceeeccccccccccCccCCCCCCccEEECCCCcccCCCC-CCcCcccccceeccccccccccCcccccccccCceEEc
Q 041878 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIP-DELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL 319 (773)
Q Consensus 241 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 319 (773)
+|++|++++|.+++..+. +..+++|+.|++++|++.+..+ ..+..+++|++|++++|.+++..|..+..+++|++|++
T Consensus 374 ~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 452 (570)
T 2z63_A 374 SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452 (570)
T ss_dssp CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEEC
Confidence 555666666666654444 8899999999999999998766 57899999999999999999999999999999999999
Q ss_pred cCCCCC-CCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCC
Q 041878 320 ENNRLG-NKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSG 398 (773)
Q Consensus 320 s~N~l~-~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g 398 (773)
++|+++ +.+|..+..+++|++|++++|++++..|..+..+++|++|+|++|++++..|..+..+++|+.|++++|+++|
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 999997 5789999999999999999999999989999999999999999999999888889999999999999999999
Q ss_pred CCchh
Q 041878 399 SVPPL 403 (773)
Q Consensus 399 ~~p~~ 403 (773)
.+|..
T Consensus 533 ~~~~~ 537 (570)
T 2z63_A 533 SCPRI 537 (570)
T ss_dssp CTTTT
T ss_pred CCcch
Confidence 99853
No 101
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.1e-35 Score=319.53 Aligned_cols=205 Identities=25% Similarity=0.433 Sum_probs=173.7
Q ss_pred HHHhhcccccccceEEEEEEe------CCCCEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeE
Q 041878 536 LCATAEIMGKSTYGTAYKATL------EDGSEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEK 607 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 607 (773)
.|.+.+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.......
T Consensus 23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~ 102 (359)
T 3vhe_A 23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 102 (359)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCC
T ss_pred ceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCce
Confidence 345678999999999999973 2457899999976533 3346799999999999 7899999999996666668
Q ss_pred EEEEeecCCCCHHHHHhhcCC-----------------------------------------------------------
Q 041878 608 LLVFDFMPKGSLASFLHARGP----------------------------------------------------------- 628 (773)
Q Consensus 608 ~lV~e~~~~g~L~~~l~~~~~----------------------------------------------------------- 628 (773)
++||||+++|+|.++++....
T Consensus 103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (359)
T 3vhe_A 103 MVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAP 182 (359)
T ss_dssp EEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------------
T ss_pred EEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccc
Confidence 999999999999999987532
Q ss_pred ----CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc-cceeeccCcccc
Q 041878 629 ----ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN-TNVIATAGTLGY 703 (773)
Q Consensus 629 ----~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y 703 (773)
...+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....... .......||+.|
T Consensus 183 ~~~~~~~l~~~~~~~~~~ql~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y 261 (359)
T 3vhe_A 183 EDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261 (359)
T ss_dssp -CTTTTCBCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG
T ss_pred cchhccccCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee
Confidence 122889999999999999999999 99999999999999999999999999999986644332 222345688999
Q ss_pred ccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 704 RAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 704 ~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 99999988999999999999999999998 999997654
No 102
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.1e-33 Score=302.52 Aligned_cols=285 Identities=24% Similarity=0.308 Sum_probs=246.1
Q ss_pred EEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCC
Q 041878 95 AIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNA 174 (773)
Q Consensus 95 ~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 174 (773)
.+++++++++ .+|..+. ++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 37 ~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 37 VVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred EEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 3555666665 5666553 689999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCCccccccccccceeecccccccccCCccccCCCccceeecccccccc--ccCCcccccccCcccccceeecccccc
Q 041878 175 LIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSG--SVPNNWGVLAGNKSYQLQFLNLDHNLI 252 (773)
Q Consensus 175 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~~~~~~L~~L~L~~n~l 252 (773)
++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|+++. ..+..+..+ +|++|++++|.+
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l------~L~~L~l~~n~l 184 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL------KLNYLRISEAKL 184 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC------CCSCCBCCSSBC
T ss_pred CC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC------ccCEEECcCCCC
Confidence 98 6676665 799999999999998777889999999999999999963 555555433 699999999999
Q ss_pred ccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhh
Q 041878 253 AGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGL 332 (773)
Q Consensus 253 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 332 (773)
++ +|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 96 454443 78999999999999888889999999999999999999888889999999999999999997 788889
Q ss_pred ccccccccccccCcccccccccccCC------CCcCceeecCCccCc--cCCCchhhccCccCEEEeeccc
Q 041878 333 ERLQNLTVLNLKNNQFKGHIPETIGN------ISGINQLDLSENDFT--GEISPSLASLANLTSFNVSYNN 395 (773)
Q Consensus 333 ~~l~~L~~L~ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ls~N~ 395 (773)
..+++|+.|++++|++++..+..+.. .++|+.|++++|++. +..|..+..+++|+.+++++|+
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 99999999999999999877777765 367999999999998 6788889999999999999885
No 103
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.8e-35 Score=312.29 Aligned_cols=200 Identities=24% Similarity=0.361 Sum_probs=169.3
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++. ..+..++||||++
T Consensus 10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~ 88 (323)
T 3tki_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCT
T ss_pred eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCeEEEEEEcCC
Confidence 45789999999999999865 789999999965432 23467889999999999999999999995 4558899999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc-cce
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN-TNV 694 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~ 694 (773)
+|+|.+++... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........ ...
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 89 GGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp TEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH-HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 99999998764 34899999999999999999999 99999999999999999999999999999986643322 222
Q ss_pred eeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.....
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 213 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence 34569999999999877665 7789999999999999999999986543
No 104
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7e-35 Score=317.93 Aligned_cols=206 Identities=28% Similarity=0.419 Sum_probs=175.1
Q ss_pred HHHHHhhcccccccceEEEEEEeC--------CCCEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECC
Q 041878 534 DLLCATAEIMGKSTYGTAYKATLE--------DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGP 603 (773)
Q Consensus 534 ~l~~~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 603 (773)
.-++.+.++||+|+||.||+|... .+..||||+++.... ....++.+|+++++++ +||||+++++++ ..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~-~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC-TQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee-cc
Confidence 334567899999999999999852 235799999976533 3457789999999999 899999999999 55
Q ss_pred CCeEEEEEeecCCCCHHHHHhhcCC-------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC
Q 041878 604 KGEKLLVFDFMPKGSLASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD 670 (773)
Q Consensus 604 ~~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~ 670 (773)
.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+||| +.||+||||||+|||++
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA-SKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEC
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCcceEEEc
Confidence 6689999999999999999987642 235899999999999999999999 99999999999999999
Q ss_pred CCCCeEEeecCCccccccccc-cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 671 EKTNPRIADFGLSRLMTAAAN-TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 671 ~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999987654332 22223457889999999999999999999999999999999 999997654
No 105
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2e-34 Score=306.93 Aligned_cols=193 Identities=22% Similarity=0.404 Sum_probs=150.2
Q ss_pred hcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
.++||+|+||.||+|... +++.||||++... ....+.+|+.+++++. ||||+++++++. .....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~-~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH-DQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE-cCCEEEEEEEccCCC
Confidence 478999999999999875 6899999999643 4567788999999997 999999999995 455899999999999
Q ss_pred CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC---CeEEeecCCccccccccccce
Q 041878 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 618 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~a~~~~~~~~~~~ 694 (773)
+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 92 ~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~ 166 (325)
T 3kn6_A 92 ELFERIKKKK---HFSETEASYIMRKLVSAVSHMH-DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PL 166 (325)
T ss_dssp BHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cc
Confidence 9999998753 4899999999999999999999 99999999999999998766 799999999986543322 22
Q ss_pred eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 34468999999999999999999999999999999999999998644
No 106
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.2e-35 Score=305.17 Aligned_cols=199 Identities=26% Similarity=0.411 Sum_probs=167.1
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.+.||+|+||+||+|...+|+.||+|++..... .....+.+|++++++++||||+++++++. ..+..++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-CSSCEEEEEECCS
T ss_pred hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-cCCeEEEEEEecC
Confidence 45688999999999999988899999999965432 23467889999999999999999999995 4558999999997
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
+ +|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....... ...
T Consensus 84 ~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 158 (288)
T 1ob3_A 84 Q-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYT 158 (288)
T ss_dssp E-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred C-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-ccc
Confidence 5 9999987642 34788999999999999999999 99999999999999999999999999999976543221 222
Q ss_pred eccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 206 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 3468999999998865 4589999999999999999999999976553
No 107
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.4e-34 Score=316.62 Aligned_cols=208 Identities=21% Similarity=0.306 Sum_probs=175.9
Q ss_pred HHHHHhhcccccc--cceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 534 DLLCATAEIMGKS--TYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 534 ~l~~~~~~~lG~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
.-+|.+.++||+| +||.||+|... +|+.||||+++... ....+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-ADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-ECCEEE
Confidence 3345678999999 99999999975 78999999997543 233467888999999999999999999995 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||+++|+|.+++.... ...+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||.+.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH-~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIH-HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 9999999999999998753 234899999999999999999999 99999999999999999999999999998875533
Q ss_pred cccc------ceeeccCccccccccccCC--CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 041878 689 AANT------NVIATAGTLGYRAPELSKL--KNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744 (773)
Q Consensus 689 ~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~ 744 (773)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 244 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 2111 1112368999999999877 679999999999999999999999998765544
No 108
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.9e-35 Score=329.29 Aligned_cols=200 Identities=29% Similarity=0.455 Sum_probs=167.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.+.+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++||||+++++++. . +..++||||+++
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~-~~~~iv~e~~~~ 262 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-E-EPIYIVTEYMSK 262 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEECCCTT
T ss_pred ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc-C-CceEEEehhhcC
Confidence 45678999999999999999888889999997654 34678999999999999999999999984 3 578999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
|+|.++++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++............
T Consensus 263 gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH-~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 263 GSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp CBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99999997542 234789999999999999999999 9999999999999999999999999999998765443333334
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..+++.|+|||.+....++.++|||||||++|||+| |+.||.+..
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 386 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC
Confidence 457889999999988899999999999999999999 999997654
No 109
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.5e-35 Score=312.25 Aligned_cols=201 Identities=25% Similarity=0.426 Sum_probs=165.0
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcc---cHHHHHHHHHHHHccCCCceEEeEEEEECCCC---eEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK---GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG---EKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~~l 609 (773)
|.+.+.||+|+||.||+|.. .+++.||||+++..... ....+.+|++++++++||||+++++++..... ..++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 34578999999999999986 57889999999765332 24578899999999999999999999854332 3489
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++++|.++++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp EEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 999999999999998754 3789999999999999999999 999999999999999999999999999999876543
Q ss_pred cc--cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 AN--TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 12233468999999999998999999999999999999999999997644
No 110
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3e-35 Score=327.65 Aligned_cols=199 Identities=23% Similarity=0.359 Sum_probs=163.0
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEeccc---CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK---TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.++||+|+||.||+|.. .+|+.||||+++.. .......+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e 228 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVME 228 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-ETTEEEEEEC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-eCCEEEEEEe
Confidence 45678999999999999986 46899999999753 2334466788999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccC-CCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE-ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~-~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
|+++|+|.+++.... .+++..+..++.||+.||+||| + .||+||||||+|||++.++.+||+|||+++.......
T Consensus 229 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 229 YANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp CCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH-HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred eCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHh-hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 999999999998754 3789999999999999999999 6 9999999999999999999999999999976433222
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 305 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 305 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 2234579999999999999999999999999999999999999997654
No 111
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.8e-34 Score=327.94 Aligned_cols=303 Identities=20% Similarity=0.245 Sum_probs=260.5
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCC-CCCCCCCCCCCCCEEE
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSG-SIPPSIGNCPNLQTLD 169 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~ 169 (773)
.+++.|+|++|.+++..|..+.++++|++|+|++|.|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~ 152 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEe
Confidence 57899999999999988999999999999999999999 56666 89999999999999997 4578999999999999
Q ss_pred ccCCCCCCCCcccccccccc--ceeecccccc--cccCCccccCCC----------------------------------
Q 041878 170 LSNNALIGAIPPSLANSTRL--YRLNLSYNSL--LGSIPLSLTRLP---------------------------------- 211 (773)
Q Consensus 170 Ls~N~l~~~~~~~l~~l~~L--~~L~Ls~N~l--~~~~~~~l~~l~---------------------------------- 211 (773)
|++|.+++. .+..+++| ++|+|++|++ ++..|..+..+.
T Consensus 153 L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 229 (562)
T 3a79_B 153 LSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIK 229 (562)
T ss_dssp EECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEE
T ss_pred cCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccc
Confidence 999999863 45555555 9999999998 666666655433
Q ss_pred -----------------------------------------------ccceeeccccccccccCCccc-----ccc----
Q 041878 212 -----------------------------------------------SLSVLALQHNNLSGSVPNNWG-----VLA---- 235 (773)
Q Consensus 212 -----------------------------------------------~L~~L~L~~N~l~~~~p~~~~-----~l~---- 235 (773)
+|++|++++|+++|.+|..+. .+.
T Consensus 230 ~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 230 LNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp CCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred ccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 678888888888888877551 000
Q ss_pred ---------------------------------------cCcccccceeeccccccccccCccCCCCCCccEEECCCCcc
Q 041878 236 ---------------------------------------GNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKI 276 (773)
Q Consensus 236 ---------------------------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 276 (773)
....++|++|++++|.+++..|..++.+++|++|+|++|++
T Consensus 310 ~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 389 (562)
T 3a79_B 310 EHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL 389 (562)
T ss_dssp EEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCC
T ss_pred hhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCc
Confidence 03456899999999999999999999999999999999999
Q ss_pred cCC--CCCCcCcccccceeccccccccccCc-ccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccc
Q 041878 277 VGP--IPDELGKLSKLQKLDLSYNAIGGSFP-VTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIP 353 (773)
Q Consensus 277 ~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~ 353 (773)
++. +|..+..+++|++|++++|++++.+| ..+..+++|++|++++|++++..|..+. ++|++|++++|+++ .+|
T Consensus 390 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip 466 (562)
T 3a79_B 390 KNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIP 466 (562)
T ss_dssp CBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCC
T ss_pred CCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccC
Confidence 973 35678999999999999999998555 4588999999999999999987777655 79999999999999 788
Q ss_pred cccCCCCcCceeecCCccCccCCCch-hhccCccCEEEeecccCCCCCchh
Q 041878 354 ETIGNISGINQLDLSENDFTGEISPS-LASLANLTSFNVSYNNLSGSVPPL 403 (773)
Q Consensus 354 ~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~ls~N~l~g~~p~~ 403 (773)
..+..+++|++|+|++|+++ .+|.. +..+++|+.|++++|+|+|.+|..
T Consensus 467 ~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 467 KDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred hhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 88889999999999999999 56665 999999999999999999998853
No 112
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=318.51 Aligned_cols=203 Identities=26% Similarity=0.393 Sum_probs=171.7
Q ss_pred HHhhcccccccceEEEEEEeC------CCCEEEEEEeccc-CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE------DGSEVAVKRLREK-TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
+.+.++||+|+||.||+|.+. +++.||||+++.. ......++.+|+.++++++||||+++++++ ......++
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-~~~~~~~l 151 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-LQSLPRFI 151 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSCEE
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCCCCEE
Confidence 456789999999999999853 4568999999754 334456789999999999999999999999 45558899
Q ss_pred EEeecCCCCHHHHHhhcCC----CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC---CeEEeecCC
Q 041878 610 VFDFMPKGSLASFLHARGP----ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGL 682 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~ 682 (773)
||||+++|+|.++++.... ...+++..++.++.||+.||+||| +.||+||||||+|||++.++ .+||+|||+
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 9999999999999987632 245899999999999999999999 99999999999999999555 499999999
Q ss_pred ccccccccc-cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 683 SRLMTAAAN-TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 683 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~ 291 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 986543322 22234457899999999988999999999999999999998 999997654
No 113
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.1e-35 Score=305.14 Aligned_cols=205 Identities=22% Similarity=0.403 Sum_probs=162.5
Q ss_pred HHHhhcccccccceEEEEEEeCC----CCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLED----GSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
+|.+.+.||+|+||.||+|.+.. +..||+|..+.... ...+.+.+|+.++++++||||+++++++ . .+..++|
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~-~~~~~lv 93 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-T-ENPVWII 93 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-C-SSSCEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-c-cCccEEE
Confidence 45667899999999999998643 45699999875433 3456789999999999999999999998 3 3478999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++++|.+++.... ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-hCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 99999999999998653 34789999999999999999999 9999999999999999999999999999998765443
Q ss_pred ccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCh
Q 041878 691 NTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~ 745 (773)
........+|+.|+|||.+....++.++||||+|+++|||++ |..||......+.
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~ 226 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH
Confidence 333334457889999999988899999999999999999997 9999987654443
No 114
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.5e-34 Score=339.72 Aligned_cols=315 Identities=20% Similarity=0.287 Sum_probs=270.4
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCc-ccc-cCCCCCCCC-------CCCceEEcccCccCCCCCC--CC
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNL-LAG-PVPWSLGFL-------PNLRGVYLFNNRLSGSIPP--SI 159 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~-l~~-~~~~~l~~l-------~~L~~L~L~~n~l~~~~p~--~l 159 (773)
.+++.|+|++|++.|.+|+.++++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .|
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 468899999999999999999999999999999998 998 788755544 59999999999999 8999 99
Q ss_pred CCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCc-cceeeccccccccccCCcccccccCc
Q 041878 160 GNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPS-LSVLALQHNNLSGSVPNNWGVLAGNK 238 (773)
Q Consensus 160 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~~~ 238 (773)
+++++|++|+|++|.++ .+| .++.+++|++|+|++|+++ .+|..+.++++ |++|+|++|+++ .+|..+....
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~--- 642 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKS--- 642 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTC---
T ss_pred hcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccc---
Confidence 99999999999999999 888 8999999999999999999 89999999999 999999999999 7887665443
Q ss_pred ccccceeeccccccccccCcc---CC--CCCCccEEECCCCcccCCCCCCc-CcccccceeccccccccccCcccccc--
Q 041878 239 SYQLQFLNLDHNLIAGTIPVS---LG--KLGLLQEISLSHNKIVGPIPDEL-GKLSKLQKLDLSYNAIGGSFPVTFTN-- 310 (773)
Q Consensus 239 ~~~L~~L~L~~n~l~~~~~~~---l~--~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~~-- 310 (773)
.++|+.|+|++|.+++.+|.. +. .+++|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+|+ .+|..+..
T Consensus 643 ~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~ 720 (876)
T 4ecn_A 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPK 720 (876)
T ss_dssp SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCT
T ss_pred cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccc
Confidence 235999999999999876643 23 3458999999999999 566554 47899999999999999 55554332
Q ss_pred ------cccCceEEccCCCCCCCcchhhc--cccccccccccCcccccccccccCCCCcCceeecCC------ccCccCC
Q 041878 311 ------ITSLVSLNLENNRLGNKIPEGLE--RLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSE------NDFTGEI 376 (773)
Q Consensus 311 ------l~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~------N~l~~~~ 376 (773)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..++.+++|+.|+|++ |++.+.+
T Consensus 721 ~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~i 798 (876)
T 4ecn_A 721 DGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQW 798 (876)
T ss_dssp TSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCC
T ss_pred cccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccC
Confidence 349999999999998 6788887 89999999999999997 798999999999999976 8889999
Q ss_pred CchhhccCccCEEEeecccCCCCCchhhhccCCCCCCCCCCC
Q 041878 377 SPSLASLANLTSFNVSYNNLSGSVPPLLSKKFNSSSFVGNLQ 418 (773)
Q Consensus 377 ~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~n~~ 418 (773)
|..+..+++|+.|+|++|++ +.+|..+...+....+.+|+.
T Consensus 799 p~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l 839 (876)
T 4ecn_A 799 PTGITTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPN 839 (876)
T ss_dssp CTTGGGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTT
T ss_pred hHHHhcCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCC
Confidence 99999999999999999999 888887655454455566653
No 115
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.1e-35 Score=302.02 Aligned_cols=200 Identities=26% Similarity=0.470 Sum_probs=174.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
|...+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++ ...+..++||||+++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVTEFMEH 87 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSSCEEEECCCTT
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE-ccCCCeEEEEeCCCC
Confidence 456789999999999999988888999999976543 457899999999999999999999999 455689999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
++|.+++.... ..+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+.............
T Consensus 88 ~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 88 GCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE-EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp CBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 99999998753 34789999999999999999999 9999999999999999999999999999998765433222334
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..+++.|+|||.+....++.++||||+|+++|||++ |+.||...+
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 457889999999988899999999999999999999 899997644
No 116
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.7e-34 Score=312.04 Aligned_cols=210 Identities=23% Similarity=0.325 Sum_probs=166.1
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||+||++... +++.||||++..... ..+.+.+|+.++++++||||+++++++. ..+..++||||++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVIL-TPTHLAIIMEYAS 99 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCC
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEe-eCCEEEEEEEeCC
Confidence 456789999999999999875 789999999975433 3467889999999999999999999995 4558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC--eEEeecCCccccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN--PRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~--~kl~DfG~a~~~~~~~~~~ 693 (773)
+|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++. +||+|||+++...... .
T Consensus 100 ~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH-~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--~ 173 (361)
T 3uc3_A 100 GGELYERICNAG---RFSEDEARFFFQQLLSGVSYCH-SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--Q 173 (361)
T ss_dssp SCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--C
Confidence 999999998754 3889999999999999999999 999999999999999987775 9999999987543222 1
Q ss_pred eeeccCccccccccccCCCCCCcc-hhhHHHHHHHHHHHcCCCCCCCCCC-CChHHHHHHHHH
Q 041878 694 VIATAGTLGYRAPELSKLKNANTK-TDVYSLGVIILELLTGKSPGEPMNG-MDLPQWVASIVK 754 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~-~Dvws~Gv~l~el~tg~~P~~~~~~-~~~~~~~~~~~~ 754 (773)
.....||+.|+|||++.+..++.+ +||||+||++|||++|+.||..... .+..+.+.++..
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 236 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS 236 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHT
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc
Confidence 223469999999999887777655 8999999999999999999987544 344444444443
No 117
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-35 Score=314.02 Aligned_cols=203 Identities=29% Similarity=0.463 Sum_probs=172.7
Q ss_pred HHhhcccccccceEEEEEEeC------CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE------DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
|.+.+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.++++++||||+++++++ ...+..++
T Consensus 49 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-~~~~~~~l 127 (343)
T 1luf_A 49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC-AVGKPMCL 127 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSSCEE
T ss_pred CeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-ccCCceEE
Confidence 456789999999999999864 347899999976533 3456799999999999999999999999 45568999
Q ss_pred EEeecCCCCHHHHHhhcCC---------------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEE
Q 041878 610 VFDFMPKGSLASFLHARGP---------------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIl 668 (773)
||||+++|+|.+++..... ...+++..++.++.||++||.||| +.||+||||||+||+
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIl 206 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS-ERKFVHRDLATRNCL 206 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEE
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCcceEE
Confidence 9999999999999987532 145899999999999999999999 999999999999999
Q ss_pred eCCCCCeEEeecCCccccccccc-cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 669 LDEKTNPRIADFGLSRLMTAAAN-TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 669 l~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...+
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 99999999999999987644332 22234467899999999988899999999999999999999 999997654
No 118
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8.6e-35 Score=307.29 Aligned_cols=202 Identities=30% Similarity=0.485 Sum_probs=166.4
Q ss_pred hHHHHHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 533 DDLLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 533 ~~l~~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
+.-.+.+.++||+|+||.||+|.+. ..+|+|+++... ....+.+.+|++++++++||||+++++++ . .+..++|
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~-~~~~~lv 109 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-T-KDNLAIV 109 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-C-SSSCEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-c-cCcEEEE
Confidence 3334567789999999999999864 469999887543 33456789999999999999999999987 3 3468999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++++|.+++.... ..+++.++..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 110 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH-AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred EecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH-hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 99999999999997653 34899999999999999999999 8999999999999999999999999999998654322
Q ss_pred -ccceeeccCccccccccccC---CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 691 -NTNVIATAGTLGYRAPELSK---LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 691 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~ 241 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC
Confidence 22223456999999999875 6678899999999999999999999997654
No 119
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.7e-33 Score=300.89 Aligned_cols=285 Identities=23% Similarity=0.278 Sum_probs=238.4
Q ss_pred EEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCC
Q 041878 96 IQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNAL 175 (773)
Q Consensus 96 l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 175 (773)
+++++++++ .+|..+. +.|++|+|++|++++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+
T Consensus 36 l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (330)
T 1xku_A 36 VQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112 (330)
T ss_dssp EECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcC
Confidence 444555555 4555443 6899999999999988888999999999999999999988899999999999999999999
Q ss_pred CCCCccccccccccceeecccccccccCCccccCCCccceeecccccccc--ccCCcccccccCcccccceeeccccccc
Q 041878 176 IGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSG--SVPNNWGVLAGNKSYQLQFLNLDHNLIA 253 (773)
Q Consensus 176 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~~~~~~L~~L~L~~n~l~ 253 (773)
+ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|+++. ..+..+..+. +|++|++++|.++
T Consensus 113 ~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~-----~L~~L~l~~n~l~ 184 (330)
T 1xku_A 113 K-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK-----KLSYIRIADTNIT 184 (330)
T ss_dssp S-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCT-----TCCEEECCSSCCC
T ss_pred C-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCC-----CcCEEECCCCccc
Confidence 8 5666654 789999999999998888889999999999999999963 5555555544 8999999999998
Q ss_pred cccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhc
Q 041878 254 GTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLE 333 (773)
Q Consensus 254 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 333 (773)
. +|..+. ++|++|++++|++++..|..|..+++|++|+|++|.+++..+..+..+++|++|+|++|+++ .+|..+.
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 5 444443 78999999999999888888999999999999999999888888999999999999999997 7788889
Q ss_pred cccccccccccCcccccccccccCC------CCcCceeecCCccCcc--CCCchhhccCccCEEEeeccc
Q 041878 334 RLQNLTVLNLKNNQFKGHIPETIGN------ISGINQLDLSENDFTG--EISPSLASLANLTSFNVSYNN 395 (773)
Q Consensus 334 ~l~~L~~L~ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~N~ 395 (773)
.+++|++|++++|++++..+..|.. .+.|+.|++++|++.. ..|..|..+.+++.++|++|+
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 9999999999999999777776654 3788899999999864 566788888999999999885
No 120
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-35 Score=313.33 Aligned_cols=202 Identities=26% Similarity=0.392 Sum_probs=170.9
Q ss_pred HHhhcccccccceEEEEEEe----CCCCEEEEEEecccC----cccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeE
Q 041878 537 CATAEIMGKSTYGTAYKATL----EDGSEVAVKRLREKT----TKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEK 607 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 607 (773)
|.+.++||+|+||.||+|.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++. ..+..
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~ 134 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TETKL 134 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE-ETTEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe-eCceE
Confidence 45678999999999999986 368999999997532 22345677899999999 5999999999984 45589
Q ss_pred EEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccc
Q 041878 608 LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMT 687 (773)
Q Consensus 608 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 687 (773)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 135 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 135 HLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 99999999999999998754 3789999999999999999999 9999999999999999999999999999998765
Q ss_pred cccccceeeccCccccccccccCC--CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC
Q 041878 688 AAANTNVIATAGTLGYRAPELSKL--KNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743 (773)
Q Consensus 688 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~ 743 (773)
...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~ 268 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc
Confidence 444433444579999999999875 45789999999999999999999999865443
No 121
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.7e-35 Score=306.14 Aligned_cols=199 Identities=25% Similarity=0.383 Sum_probs=164.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc--------------------------cHHHHHHHHHHHHccC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK--------------------------GQKEFEAEAAAIGKIH 589 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--------------------------~~~~~~~E~~~l~~l~ 589 (773)
|.+.+.||+|+||.||+|... +++.||||++...... ..+++.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 345788999999999999864 6889999999654211 1356889999999999
Q ss_pred CCceEEeEEEEECC-CCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEE
Q 041878 590 HPNLLALRAYYLGP-KGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVL 668 (773)
Q Consensus 590 h~niv~l~~~~~~~-~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIl 668 (773)
||||+++++++... .+..++||||+++++|.+++.. ..+++..+..++.||+.||+||| +.||+||||||+||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLH-YQKIIHRDIKPSNLL 169 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHEE
Confidence 99999999999653 4578999999999999876543 34899999999999999999999 899999999999999
Q ss_pred eCCCCCeEEeecCCccccccccccceeeccCccccccccccCCCC---CCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 669 LDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKN---ANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 669 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||...+
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999987653322 223456999999999987655 4788999999999999999999997543
No 122
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.3e-34 Score=300.43 Aligned_cols=201 Identities=34% Similarity=0.569 Sum_probs=172.2
Q ss_pred hcccccccceEEEEEEeCCCCEEEEEEecccC----cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
++.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++ ...+..++||||++
T Consensus 36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~ 113 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS-SDGDDLCLVYVYMP 113 (307)
T ss_dssp CCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSCEEEEECCT
T ss_pred CCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEE-ecCCceEEEEEecC
Confidence 37899999999999987 58899999986532 23357799999999999999999999999 45568999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc-e
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN-V 694 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~-~ 694 (773)
+++|.+++........+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++.......... .
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 192 (307)
T 2nru_A 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192 (307)
T ss_dssp TCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred CCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh-cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence 9999999986544456899999999999999999999 9999999999999999999999999999998665432222 2
Q ss_pred eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~ 744 (773)
....||+.|+|||.+.+ .++.++||||||+++|||++|+.||......+
T Consensus 193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 241 (307)
T 2nru_A 193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241 (307)
T ss_dssp SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS
T ss_pred cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH
Confidence 23468999999998764 58899999999999999999999998765444
No 123
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=311.30 Aligned_cols=196 Identities=24% Similarity=0.408 Sum_probs=155.9
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++. ..+..++||||++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE-TPTEISLVLELVT 131 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCC
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe-cCCeEEEEEEeCC
Confidence 345688999999999999975 57899999997543 3567889999999999999999999995 4558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC---CCCeEEeecCCcccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE---KTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++. ++.+||+|||+++.......
T Consensus 132 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 206 (349)
T 2w4o_A 132 GGELFDRIVEKG---YYSERDAADAVKQILEAVAYLH-ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL- 206 (349)
T ss_dssp SCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc-
Confidence 999999998643 3789999999999999999999 999999999999999975 88999999999986543321
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 207 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 254 (349)
T 2w4o_A 207 -MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred -cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence 223468999999999998899999999999999999999999997654
No 124
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.5e-34 Score=306.05 Aligned_cols=199 Identities=25% Similarity=0.441 Sum_probs=173.7
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc------cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK------GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
.|.+.+.||+|+||.||+|... +|+.||+|.+...... ..+++.+|+.++++++||||+++++++. ..+..+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE-NRTDVV 91 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCEEE
Confidence 3567889999999999999865 6899999999754322 3678999999999999999999999995 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC----CeEEeecCCcc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT----NPRIADFGLSR 684 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~ 684 (773)
+||||+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH-~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999998643 4789999999999999999999 99999999999999999888 79999999998
Q ss_pred ccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 685 LMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 685 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...+
T Consensus 168 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 222 (321)
T 2a2a_A 168 EIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222 (321)
T ss_dssp ECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred ecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC
Confidence 7654322 233468999999999998999999999999999999999999997644
No 125
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-34 Score=315.87 Aligned_cols=200 Identities=26% Similarity=0.413 Sum_probs=160.3
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEeccc--CcccHHHHHHHHHHHHccC-CCceEEeEEEEECCC-CeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPK-GEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~~lV~ 611 (773)
|.+.+.||+|+||.||+|.+ .+|+.||||++... .......+.+|+.+++++. ||||+++++++.... ...++||
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~ 90 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF 90 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence 34578999999999999986 47899999998643 2334567889999999997 999999999996543 3689999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc-
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA- 690 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~- 690 (773)
||++ ++|.++++.. .++...+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+|+......
T Consensus 91 e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 91 DYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLH-SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp ECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred cccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH-hCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 9997 6999998764 3788999999999999999999 9999999999999999999999999999998653211
Q ss_pred -------------------ccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 691 -------------------NTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 691 -------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 111233569999999998876 6789999999999999999999999976543
No 126
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-35 Score=319.77 Aligned_cols=218 Identities=21% Similarity=0.350 Sum_probs=181.7
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCC-CeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-GEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~lV~e~ 613 (773)
|.+.++||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ...++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 345789999999999999875 58999999997543 334577889999999999999999999986544 367999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe----CCCCCeEEeecCCccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL----DEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll----~~~~~~kl~DfG~a~~~~~~ 689 (773)
+++|+|.++++.......+++..++.++.||+.||+||| +.||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH-HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999999987654445899999999999999999999 9999999999999999 77778999999999876543
Q ss_pred cccceeeccCccccccccccCC--------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC-CChHHHHHHHHHhhh
Q 041878 690 ANTNVIATAGTLGYRAPELSKL--------KNANTKTDVYSLGVIILELLTGKSPGEPMNG-MDLPQWVASIVKEEW 757 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~-~~~~~~~~~~~~~~~ 757 (773)
.. .....||+.|+|||++.. ..++.++|||||||++|||++|+.||.+... ....+.+.+++.+.+
T Consensus 170 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 170 EQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp GG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred Cc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 32 223468999999998764 5678899999999999999999999987543 445566666665543
No 127
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-34 Score=322.06 Aligned_cols=198 Identities=26% Similarity=0.450 Sum_probs=171.9
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++. ..+..++|||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-~~~~~~lv~E 96 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-TPSDIFMVME 96 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEe
Confidence 345789999999999999875 79999999996532 223567899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH-~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~- 171 (476)
T 2y94_A 97 YVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 171 (476)
T ss_dssp CCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC-
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc-
Confidence 999999999997643 4899999999999999999999 99999999999999999999999999999987654322
Q ss_pred ceeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++.+..+ +.++||||+||++|||++|+.||...+
T Consensus 172 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 172 -LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp -BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 234469999999999887766 689999999999999999999997644
No 128
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.1e-35 Score=307.45 Aligned_cols=201 Identities=23% Similarity=0.441 Sum_probs=169.2
Q ss_pred HHHhhcccccccceEEEEEEe-----CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECC-CCeEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATL-----EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-KGEKLL 609 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~l 609 (773)
+|.+.+.||+|+||+||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++... ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 345678999999999999984 36789999999876666677899999999999999999999998543 245899
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 91 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHh-cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999998753 34889999999999999999999 999999999999999999999999999999876543
Q ss_pred ccc--ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 690 ANT--NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 690 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
... ......+++.|+|||.+.+..++.++||||||+++|||+||..||..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 321 12233477789999999989999999999999999999999998764
No 129
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-35 Score=316.63 Aligned_cols=208 Identities=30% Similarity=0.510 Sum_probs=164.9
Q ss_pred HHHhhcccccccceEEEEEEeC--CC--CEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE--DG--SEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~--~g--~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
.+...++||+|+||.||+|.+. ++ ..||||.++... ....+++.+|+.++++++||||+++++++....+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3455689999999999999863 22 358999987543 344578999999999999999999999986666688999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++|+|.++++... ..+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH-HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 99999999999997643 34788999999999999999999 9999999999999999999999999999998664332
Q ss_pred cc---ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCChH
Q 041878 691 NT---NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLP 746 (773)
Q Consensus 691 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~~ 746 (773)
.. ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||...+..+..
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~ 306 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 306 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH
Confidence 21 1223457889999999998999999999999999999999 67788776555443
No 130
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.3e-34 Score=308.88 Aligned_cols=205 Identities=27% Similarity=0.483 Sum_probs=167.1
Q ss_pred HHhhcccccccceEEEEEEeC-CCCE----EEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSE----VAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
|...++||+|+||+||+|.+. +++. ||+|.++... ....+++.+|+.++++++||||+++++++... ..++|
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~v 94 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--TVQLI 94 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS--SEEEE
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEE
Confidence 456789999999999999864 4443 6888886443 34567899999999999999999999999643 57899
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
+||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHh-hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 99999999999998753 34889999999999999999999 8999999999999999999999999999998765443
Q ss_pred cc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCChH
Q 041878 691 NT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLP 746 (773)
Q Consensus 691 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~~ 746 (773)
.. ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 229 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH
Confidence 22 2223457889999999999999999999999999999999 99999876554443
No 131
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-34 Score=307.86 Aligned_cols=208 Identities=27% Similarity=0.413 Sum_probs=175.6
Q ss_pred HHHhhcccccccceEEEEEEe------CCCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 536 LCATAEIMGKSTYGTAYKATL------EDGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
.|.+.+.||+|+||.||+|.. .+++.||||+++... ....+++.+|++++++++||||+++++++ ...+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-~~~~~~~ 102 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLL 102 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSSCE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-ecCCceE
Confidence 356778999999999999985 245789999997543 33457789999999999999999999999 5556899
Q ss_pred EEEeecCCCCHHHHHhhcCC---------------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCE
Q 041878 609 LVFDFMPKGSLASFLHARGP---------------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NI 667 (773)
+||||+++|+|.+++..... ...+++..+..++.||+.||+||| +.||+||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-EMKLVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH-HCCCcccccchheE
Confidence 99999999999999987532 234889999999999999999999 99999999999999
Q ss_pred EeCCCCCeEEeecCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCh
Q 041878 668 LLDEKTNPRIADFGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745 (773)
Q Consensus 668 ll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~ 745 (773)
+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||+||++|||++ |+.||...+..++
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999876443221 1223457889999999988889999999999999999999 9999987654433
No 132
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-34 Score=322.42 Aligned_cols=196 Identities=22% Similarity=0.300 Sum_probs=163.0
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECCC-----CeEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-----GEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~~ 608 (773)
|.+.++||+|+||+||+|... +|+.||||++... .....+++.+|+.+++.++||||+++++++.... ...+
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 456789999999999999864 6889999999754 3334567889999999999999999999995432 3579
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||+++ ++.+.+.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 144 lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH-~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 144 LVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99999975 57666653 2788999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. ......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+
T Consensus 217 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 217 SF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 2234568999999999999999999999999999999999999997654
No 133
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.2e-34 Score=299.29 Aligned_cols=208 Identities=25% Similarity=0.378 Sum_probs=170.4
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
.+.++||+|+||+||+|... +++.||||++..... .....+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~ 83 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECC
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-eCCEEEEEEecC
Confidence 45688999999999999875 689999999975432 23467889999999999999999999995 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
++ ++.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 84 ~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH-~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 158 (292)
T 3o0g_A 84 DQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCH-SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-CY 158 (292)
T ss_dssp SE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-CC
T ss_pred CC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-cc
Confidence 75 6666665532 34899999999999999999999 89999999999999999999999999999987643322 22
Q ss_pred eeccCccccccccccCCCC-CCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHH
Q 041878 695 IATAGTLGYRAPELSKLKN-ANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIV 753 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~ 753 (773)
....||+.|+|||++.+.. ++.++||||+||++|||++|+.||... .+..+.+.++.
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~--~~~~~~~~~i~ 216 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG--NDVDDQLKRIF 216 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC--SSHHHHHHHHH
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC--CCHHHHHHHHH
Confidence 3446899999999887655 899999999999999999999886432 33444444443
No 134
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-34 Score=311.45 Aligned_cols=204 Identities=25% Similarity=0.352 Sum_probs=167.1
Q ss_pred HHHhhcccccccceEEEEEEe-CCCCEEEEEEeccc-----CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK-----TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
+|.+.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~l 105 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-DEQYICL 105 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-cCCeEEE
Confidence 356788999999999999986 46889999998643 2345678999999999999999999999995 4558999
Q ss_pred EEeecCCCCHHHHHhhcC-------------------------------------CCCccCHHHHHHHHHHHHHHHHHhc
Q 041878 610 VFDFMPKGSLASFLHARG-------------------------------------PETIVNWATRMSIAIGIARGLNYLH 652 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~-------------------------------------~~~~~~~~~~~~i~~~i~~al~yLH 652 (773)
||||+++|+|.+++.... ....+++..+..++.||+.||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986311 0112356778889999999999999
Q ss_pred cCCCceecCCCCCCEEeCCCC--CeEEeecCCccccccccc---cceeeccCccccccccccCC--CCCCcchhhHHHHH
Q 041878 653 VEENMIHGNLTSSNVLLDEKT--NPRIADFGLSRLMTAAAN---TNVIATAGTLGYRAPELSKL--KNANTKTDVYSLGV 725 (773)
Q Consensus 653 ~~~~iiH~Dik~~NIll~~~~--~~kl~DfG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv 725 (773)
+.+|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||.+.. ..++.++|||||||
T Consensus 186 -~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 186 -NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp -HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred -HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 89999999999999998777 899999999986643221 12334569999999998865 67899999999999
Q ss_pred HHHHHHcCCCCCCCCC
Q 041878 726 IILELLTGKSPGEPMN 741 (773)
Q Consensus 726 ~l~el~tg~~P~~~~~ 741 (773)
++|||++|+.||...+
T Consensus 265 il~el~~g~~pf~~~~ 280 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVN 280 (345)
T ss_dssp HHHHHHHSSCSSCCSS
T ss_pred HHHHHHHCCCCCCCCC
Confidence 9999999999997654
No 135
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-34 Score=303.76 Aligned_cols=206 Identities=31% Similarity=0.461 Sum_probs=177.8
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
.|.+.+.||+|+||.||+|.+. ++..||+|.+.... ...+++.+|++++++++||||+++++++ ...+..++||||+
T Consensus 14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFM 91 (288)
T ss_dssp GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSEEEEEECC
T ss_pred ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEE-ccCCCEEEEEEcC
Confidence 3456789999999999999876 47889999997543 3467899999999999999999999999 5556899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
++++|.+++.... ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+...........
T Consensus 92 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 92 TYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp TTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHH-HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHH-HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999998754 345899999999999999999999 99999999999999999999999999999987765443333
Q ss_pred eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCh
Q 041878 695 IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~ 745 (773)
....+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...+..+.
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~ 221 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 34457889999999988899999999999999999999 9999987554443
No 136
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-34 Score=302.43 Aligned_cols=203 Identities=27% Similarity=0.394 Sum_probs=170.2
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC-----cccHHHHHHHHHHHHccC---CCceEEeEEEEECCCC--
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT-----TKGQKEFEAEAAAIGKIH---HPNLLALRAYYLGPKG-- 605 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~-- 605 (773)
|.+.++||+|+||+||+|.. .+++.||||++.... ......+.+|++++++++ ||||+++++++.....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 45678999999999999986 578999999986432 122356777888877775 9999999999965443
Q ss_pred --eEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCc
Q 041878 606 --EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLS 683 (773)
Q Consensus 606 --~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a 683 (773)
..++||||++ ++|.+++..... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred ceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 4789999996 699999987643 34899999999999999999999 999999999999999999999999999999
Q ss_pred cccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 041878 684 RLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744 (773)
Q Consensus 684 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~ 744 (773)
+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+
T Consensus 168 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 226 (308)
T 3g33_A 168 RIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226 (308)
T ss_dssp TTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH
T ss_pred cccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 86643322 234568999999999988999999999999999999999999997765433
No 137
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-34 Score=307.62 Aligned_cols=207 Identities=28% Similarity=0.434 Sum_probs=161.4
Q ss_pred HHHhhcccccccceEEEEEEeCCC----CEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCe---
Q 041878 536 LCATAEIMGKSTYGTAYKATLEDG----SEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGE--- 606 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~g----~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 606 (773)
.|.+.+.||+|+||.||+|.+... ..||||+++.. .....+++.+|++++++++||||+++++++......
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 456778999999999999986533 27999999754 334567899999999999999999999999654321
Q ss_pred --EEEEEeecCCCCHHHHHhhcCC---CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecC
Q 041878 607 --KLLVFDFMPKGSLASFLHARGP---ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681 (773)
Q Consensus 607 --~~lV~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG 681 (773)
.++||||+++|+|.+++..... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS-SRNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH-cCCcccCCCCcceEEEcCCCCEEEeecc
Confidence 3899999999999999976431 224899999999999999999999 9999999999999999999999999999
Q ss_pred Ccccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCC
Q 041878 682 LSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGM 743 (773)
Q Consensus 682 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~ 743 (773)
+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...+..
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~ 246 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA 246 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH
Confidence 99876543322 2223457889999999998999999999999999999999 99999875543
No 138
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.2e-34 Score=300.41 Aligned_cols=204 Identities=22% Similarity=0.417 Sum_probs=169.4
Q ss_pred HHhhcccccccceEEEEEEeCC----CCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLED----GSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ....+.+.+|+.++++++||||+++++++. . +..++||
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~-~~~~~v~ 91 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-E-EPTWIIM 91 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-S-SSCEEEE
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-C-CCCEEEE
Confidence 4567899999999999998542 2359999997653 334678999999999999999999999984 3 3578999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||+++++|.+++.... ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 92 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 92 ELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLE-SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp ECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred ecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 9999999999998753 34789999999999999999999 99999999999999999999999999999987655443
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCh
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~ 745 (773)
.......+|+.|+|||.+....++.++||||||+++|||+| |+.||......+.
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~ 223 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH
Confidence 33344557889999999988899999999999999999998 9999976554433
No 139
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.8e-34 Score=312.64 Aligned_cols=195 Identities=23% Similarity=0.355 Sum_probs=160.0
Q ss_pred cccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHc-cCCCceEEeEEEEEC---CCCeEEEEEeecC
Q 041878 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGK-IHHPNLLALRAYYLG---PKGEKLLVFDFMP 615 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~---~~~~~~lV~e~~~ 615 (773)
++||+|+||+||+|... +|+.||||+++. ...+.+|+.++.+ .+||||+++++++.. .....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999865 689999999953 3456778888754 579999999998843 2446899999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC---CCCeEEeecCCcccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE---KTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+|+|.+++.... ...+++..+..++.||+.||.||| +.||+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-- 218 (400)
T 1nxk_A 143 GGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-- 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC--
Confidence 999999998753 235899999999999999999999 899999999999999998 7889999999998654322
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~ 744 (773)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+...
T Consensus 219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 270 (400)
T 1nxk_A 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 270 (400)
T ss_dssp --------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCS
T ss_pred ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccc
Confidence 2234568999999999999999999999999999999999999998765443
No 140
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-34 Score=313.56 Aligned_cols=200 Identities=19% Similarity=0.277 Sum_probs=164.4
Q ss_pred HHhhcccccccceEEEEEEeCC------CCEEEEEEecccCccc-----------HHHHHHHHHHHHccCCCceEEeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLED------GSEVAVKRLREKTTKG-----------QKEFEAEAAAIGKIHHPNLLALRAY 599 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~~ 599 (773)
|.+.++||+|+||.||+|.+.. ++.||||++....... ...+..|+..++.++|+||++++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 3567899999999999998754 4789999987543211 1123345666778889999999999
Q ss_pred EECCC---CeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC--CCCC
Q 041878 600 YLGPK---GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD--EKTN 674 (773)
Q Consensus 600 ~~~~~---~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~--~~~~ 674 (773)
+.... ...++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+|||++ .++.
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH-~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIH-EHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEEESSCTTC
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH-HCCeEEecCCHHHEEEecCCCCe
Confidence 86532 3579999999 999999998752 34899999999999999999999 89999999999999999 8899
Q ss_pred eEEeecCCccccccccccc------eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 675 PRIADFGLSRLMTAAANTN------VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 675 ~kl~DfG~a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9999999998765432211 12335999999999999999999999999999999999999999863
No 141
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.8e-34 Score=307.56 Aligned_cols=210 Identities=22% Similarity=0.361 Sum_probs=174.3
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|... +|+.||||++...... ..+|++++.++ +||||+++++++. ..+..++||||+
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~E~~ 98 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYD-DGKYVYVVTELM 98 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEE-CSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEE-cCCEEEEEEeCC
Confidence 456789999999999999875 6889999999754332 34688888887 7999999999994 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC-C---CeEEeecCCcccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK-T---NPRIADFGLSRLMTAAA 690 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~-~---~~kl~DfG~a~~~~~~~ 690 (773)
++|+|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+||++.++ + .+||+|||+++......
T Consensus 99 ~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH-~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 99 KGGELLDKILRQK---FFSEREASAVLFTITKTVEYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 9999999998753 4899999999999999999999 9999999999999998543 3 49999999998764432
Q ss_pred ccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHHHhh
Q 041878 691 NTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIVKEE 756 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 756 (773)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.........+...++....
T Consensus 175 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 239 (342)
T 2qr7_A 175 G-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK 239 (342)
T ss_dssp C-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC
T ss_pred C-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC
Confidence 2 2234568999999999988889999999999999999999999998765555555555555443
No 142
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=9.3e-34 Score=298.21 Aligned_cols=209 Identities=16% Similarity=0.255 Sum_probs=176.5
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.+++++ +|+|++++++++. .....++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~ 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLL 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-ETTEEEEEEECC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC-CCceeEEEEEec
Confidence 34568899999999999985 578999999986443 334678899999999 7999999999984 555899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC-----eEEeecCCccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN-----PRIADFGLSRLMTAA 689 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~-----~kl~DfG~a~~~~~~ 689 (773)
+++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIH-EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 999999998753 34899999999999999999999 999999999999999988776 999999999876544
Q ss_pred ccc------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q 041878 690 ANT------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASI 752 (773)
Q Consensus 690 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~ 752 (773)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+..+..+....+
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 233 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH
Confidence 321 123456999999999999999999999999999999999999999987665555544444
No 143
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.7e-34 Score=334.16 Aligned_cols=199 Identities=23% Similarity=0.348 Sum_probs=172.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEeccc---CcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK---TTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.++||+|+||.||+|... +++.||||+++.. .......+..|..++..+ +|++|+++++++ ...+..|+||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~-~~~~~~~lV~ 421 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-QTMDRLYFVM 421 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC-BCSSEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE-EeCCEEEEEE
Confidence 345689999999999999865 6889999999753 233456788899999987 699999999988 4556899999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||+++|+|.++++... .+++..+..++.||+.||+||| +.|||||||||+|||++.++.+||+|||+++.......
T Consensus 422 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH-~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 422 EYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQ-SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred eCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 9999999999998764 3889999999999999999999 99999999999999999999999999999986433222
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..|+.++|||||||++|||++|+.||...+
T Consensus 498 -~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 498 -TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp -CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 2334579999999999999999999999999999999999999997654
No 144
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.4e-35 Score=332.90 Aligned_cols=200 Identities=29% Similarity=0.455 Sum_probs=173.5
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.+.++||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++|+||+++++++.. +..++||||+++
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~~~ 345 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSK 345 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTT
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehhcC
Confidence 45678999999999999999888889999997654 346789999999999999999999999843 578999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
|+|.++++... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++............
T Consensus 346 gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 346 GSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp EEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred CcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 99999997542 133789999999999999999999 9999999999999999999999999999998765433222233
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..++..|+|||++....++.++|||||||++|||+| |+.||....
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~ 469 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 469 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 456789999999988899999999999999999999 999997654
No 145
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.4e-34 Score=301.57 Aligned_cols=207 Identities=30% Similarity=0.505 Sum_probs=171.8
Q ss_pred HHHhhcccccccceEEEEEEeCC----CCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLED----GSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
.|.+.++||+|+||.||+|.+.+ ...||+|.+..... ...+.+.+|+.++++++||||+++++++....+..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 34567899999999999998642 22589999875433 34567899999999999999999999986677788999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++|+|.++++... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 99999999999997643 34788999999999999999999 9999999999999999999999999999998765433
Q ss_pred cc---ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCh
Q 041878 691 NT---NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDL 745 (773)
Q Consensus 691 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~ 745 (773)
.. ......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...+..+.
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~ 241 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 241 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence 21 2234457889999999988999999999999999999999 5666766554443
No 146
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.3e-34 Score=301.76 Aligned_cols=198 Identities=24% Similarity=0.391 Sum_probs=165.9
Q ss_pred hcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 540 AEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
.++||+|+||.||+|.. .+++.||||++..........+.+|++++.++ +||||+++++++. ..+..++||||+++|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~ 96 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE-EEDRFYLVFEKMRGG 96 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCTTC
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-eCCEEEEEEEcCCCC
Confidence 36799999999999985 47899999999876666678899999999985 7999999999995 455899999999999
Q ss_pred CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC---eEEeecCCccccccccc---
Q 041878 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN---PRIADFGLSRLMTAAAN--- 691 (773)
Q Consensus 618 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~~~~~~~--- 691 (773)
+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++........
T Consensus 97 ~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (316)
T 2ac3_A 97 SILSHIHKRR---HFNELEASVVVQDVASALDFLH-NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172 (316)
T ss_dssp BHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------
T ss_pred cHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc
Confidence 9999998753 3789999999999999999999 899999999999999998876 99999999876542211
Q ss_pred ---cceeeccCccccccccccCC-----CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 692 ---TNVIATAGTLGYRAPELSKL-----KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 692 ---~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
.......||+.|+|||++.. ..++.++||||+||++|||++|+.||.....
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 231 (316)
T 2ac3_A 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231 (316)
T ss_dssp ---------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence 11223458999999998864 5688999999999999999999999987543
No 147
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.4e-34 Score=307.96 Aligned_cols=205 Identities=28% Similarity=0.443 Sum_probs=172.7
Q ss_pred HHHHhhcccccccceEEEEEEeC--------CCCEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCC
Q 041878 535 LLCATAEIMGKSTYGTAYKATLE--------DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPK 604 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 604 (773)
-.|.+.+.||+|+||.||+|.+. ++..||||+++.... ....++.+|+++++++ +||||+++++++ ...
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-~~~ 113 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-TQD 113 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE-ccC
Confidence 34567899999999999999863 467899999975533 3456789999999999 899999999999 455
Q ss_pred CeEEEEEeecCCCCHHHHHhhcCC-------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC
Q 041878 605 GEKLLVFDFMPKGSLASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE 671 (773)
Q Consensus 605 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~ 671 (773)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||.||| +.||+||||||+||+++.
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA-SQKCIHRDLAARNVLVTE 192 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECT
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCccceEEEcC
Confidence 689999999999999999987542 234789999999999999999999 999999999999999999
Q ss_pred CCCeEEeecCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 672 KTNPRIADFGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 672 ~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...+
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 999999999999876543221 1223357889999999988889999999999999999999 999997654
No 148
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6e-34 Score=297.48 Aligned_cols=197 Identities=28% Similarity=0.418 Sum_probs=170.7
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~ 87 (284)
T 3kk8_A 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCC
T ss_pred hhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-cCCEEEEEEecC
Confidence 45688999999999999865 68999999997543 234567889999999999999999999994 555889999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC---eEEeecCCccccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN---PRIADFGLSRLMTAAAN 691 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~~~~~~~ 691 (773)
++++|.+++.... .+++..+..++.|++.||.||| +.||+||||||+||+++.++. +||+|||.+........
T Consensus 88 ~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 88 TGGELFEDIVARE---FYSEADASHCIQQILESIAYCH-SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp CSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 9999999988753 3789999999999999999999 999999999999999987665 99999999976654332
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...+
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 211 (284)
T 3kk8_A 164 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211 (284)
T ss_dssp --CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc
Confidence 223568999999999999999999999999999999999999997644
No 149
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-34 Score=308.48 Aligned_cols=206 Identities=23% Similarity=0.394 Sum_probs=172.1
Q ss_pred HHHHhhcccccccceEEEEEEe------CCCCEEEEEEecccC-cccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCe
Q 041878 535 LLCATAEIMGKSTYGTAYKATL------EDGSEVAVKRLREKT-TKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGE 606 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 606 (773)
-.|.+.+.||+|+||.||+|.. .++..||||.+.... ....+.+.+|+.+++++ +||||+++++++ ...+.
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-~~~~~ 123 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC-TLSGP 123 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSS
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-eeCCc
Confidence 3456788999999999999985 235679999997543 33457899999999999 899999999999 45568
Q ss_pred EEEEEeecCCCCHHHHHhhcCCC--------------------CccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCC
Q 041878 607 KLLVFDFMPKGSLASFLHARGPE--------------------TIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSN 666 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~N 666 (773)
.++||||+++|+|.+++...... ..+++..++.++.||+.||+||| +.||+||||||+|
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~N 202 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE-FKSCVHRDLAARN 202 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH-HTTEEETTCSGGG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCChhh
Confidence 99999999999999999875321 23789999999999999999999 8999999999999
Q ss_pred EEeCCCCCeEEeecCCccccccccccc-eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 667 VLLDEKTNPRIADFGLSRLMTAAANTN-VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 667 Ill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
|+++.++.+||+|||++.......... .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999998765443322 223357889999999988899999999999999999998 9999977543
No 150
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=302.59 Aligned_cols=194 Identities=28% Similarity=0.501 Sum_probs=163.0
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.+.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||+++
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~~~~ 83 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEG 83 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEECCTT
T ss_pred eeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEcCCC
Confidence 346789999999999999875 788999999643 34678999999999999999999999873 357999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccC---CCceecCCCCCCEEeCCCCC-eEEeecCCcccccccccc
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE---ENMIHGNLTSSNVLLDEKTN-PRIADFGLSRLMTAAANT 692 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~---~~iiH~Dik~~NIll~~~~~-~kl~DfG~a~~~~~~~~~ 692 (773)
|+|.+++........+++..++.++.||++||+||| + +||+||||||+||+++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH-~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-- 160 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-- 160 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHH-TCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHH-hCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc--
Confidence 999999987654445788999999999999999999 6 79999999999999998887 7999999987654321
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 161 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 207 (307)
T 2eva_A 161 --TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 207 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC
T ss_pred --ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC
Confidence 23358999999999998999999999999999999999999997643
No 151
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.1e-34 Score=302.19 Aligned_cols=200 Identities=28% Similarity=0.474 Sum_probs=172.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
|.+.+.||+|+||.||+|...++..||||.++... ...+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMEN 91 (279)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCTT
T ss_pred hhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc--CCCcEEEEecCCC
Confidence 45678999999999999998888899999997543 34678999999999999999999999984 3368999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
++|.+++.... ...+++..+..++.|++.||+||| +.||+||||||+||++++++.+||+|||.+.............
T Consensus 92 ~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 92 GSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIE-ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp CBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 99999997542 123789999999999999999999 9999999999999999999999999999998765443322233
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||...+
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 215 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence 456789999999988889999999999999999999 999997644
No 152
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=299.45 Aligned_cols=197 Identities=25% Similarity=0.310 Sum_probs=163.0
Q ss_pred HHHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc--ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEE
Q 041878 535 LLCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT--KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV 610 (773)
-.|...++||+|+||+||+|.+. +|+.||||++..... ....++..|+..+.++ +|+||+++++++. ..+..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-EGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-eCCEEEEE
Confidence 45667889999999999999875 799999999865432 2334555666666655 8999999999994 55689999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+ +++|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLH-SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 779999988763 34899999999999999999999 8999999999999999999999999999987664332
Q ss_pred ccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 691 NTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
. .....||+.|+|||++.+ .++.++|||||||++|||++|..|+..
T Consensus 212 ~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 212 A--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred C--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2 233458999999998875 789999999999999999999776644
No 153
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=306.58 Aligned_cols=197 Identities=21% Similarity=0.337 Sum_probs=169.9
Q ss_pred HHHhhcccccccceEEEEEEe-CCCCEEEEEEecccCc--------ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCe
Q 041878 536 LCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTT--------KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGE 606 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 606 (773)
+|.+.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++++++||||+++++++. ..+.
T Consensus 25 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~ 103 (335)
T 3dls_A 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE-NQGF 103 (335)
T ss_dssp HEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE-CSSE
T ss_pred ceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-eCCE
Confidence 455678999999999999985 4688999999975431 12346778999999999999999999994 5558
Q ss_pred EEEEEeecCCC-CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 607 KLLVFDFMPKG-SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 607 ~~lV~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
.++||||+.+| +|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLR-LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 99999999777 9999998754 3899999999999999999999 99999999999999999999999999999987
Q ss_pred cccccccceeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
....... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 180 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 180 LERGKLF--YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CCTTCCB--CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred CCCCCce--eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 6544322 23468999999999887776 7899999999999999999999975
No 154
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-34 Score=298.43 Aligned_cols=201 Identities=23% Similarity=0.379 Sum_probs=167.5
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~ 101 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMET 101 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-cCCeEEEEEEe
Confidence 3566799999999999999864 68899999997653 345688999999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcC-CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCccccccc
Q 041878 614 MPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 614 ~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~ 689 (773)
+++|+|.+++.... ....+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH-hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 99999999986541 1344899999999999999999999 9999999999999999 45678999999999865443
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. .....||+.|+|||.+. ..++.++||||+|+++|||++|+.||...+
T Consensus 181 ~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~ 229 (285)
T 3is5_A 181 EH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence 22 23446899999999876 578999999999999999999999997654
No 155
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.2e-34 Score=295.93 Aligned_cols=199 Identities=25% Similarity=0.438 Sum_probs=170.7
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc------ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT------KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
.|.+.+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 84 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE-NKTDVV 84 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-CCCeEE
Confidence 3556789999999999999875 689999999875422 23678999999999999999999999995 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC----CeEEeecCCcc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT----NPRIADFGLSR 684 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~----~~kl~DfG~a~ 684 (773)
+||||+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999998753 3789999999999999999999 99999999999999999887 79999999998
Q ss_pred ccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 685 LMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 685 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....... .....+|+.|+|||.+....++.++||||||+++|||++|+.||...+
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 215 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence 6643322 223458999999999998999999999999999999999999997654
No 156
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.7e-34 Score=299.31 Aligned_cols=196 Identities=26% Similarity=0.439 Sum_probs=162.8
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHc--cCCCceEEeEEEEECC---CCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGK--IHHPNLLALRAYYLGP---KGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~---~~~~~lV~ 611 (773)
|.+.+.||+|+||+||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++... ....++||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 34578999999999999987 5899999998643 34555666666666 7899999999987542 34678999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc-------CCCceecCCCCCCEEeCCCCCeEEeecCCcc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV-------EENMIHGNLTSSNVLLDEKTNPRIADFGLSR 684 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~-------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 684 (773)
||+++|+|.++++.. .+++..+..++.||+.||+|||. +.+|+||||||+|||++.++.+||+|||+++
T Consensus 86 e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 86 HYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp CCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred hhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 999999999999653 48999999999999999999994 6789999999999999999999999999997
Q ss_pred ccccccccc---eeeccCccccccccccCCC------CCCcchhhHHHHHHHHHHHcC----------CCCCCCC
Q 041878 685 LMTAAANTN---VIATAGTLGYRAPELSKLK------NANTKTDVYSLGVIILELLTG----------KSPGEPM 740 (773)
Q Consensus 685 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~el~tg----------~~P~~~~ 740 (773)
......... .....||+.|+|||++.+. .+++++|||||||++|||+|| +.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 665433221 1234699999999998766 455799999999999999999 8888764
No 157
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.5e-34 Score=296.96 Aligned_cols=196 Identities=27% Similarity=0.426 Sum_probs=148.9
Q ss_pred HhhcccccccceEEEEEEe-CCCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 16 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~ 94 (275)
T 2eue_A 16 QIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEY 94 (275)
T ss_dssp CCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSCEEEEEEC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-cCCeEEEEehh
Confidence 4568899999999999985 478999999997542 234568899999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+ ++++.+++.... .+++..+..++.|++.|+.||| +.||+||||||+||++++++.+||+|||++........
T Consensus 95 ~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 167 (275)
T 2eue_A 95 A-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-- 167 (275)
T ss_dssp C-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred c-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCChHhEEECCCCCEEEeecccceeccCccc--
Confidence 9 778888887653 3899999999999999999999 99999999999999999999999999999976544322
Q ss_pred eeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+..+ ++++||||+|+++|||++|+.||...+
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 223458999999999887765 789999999999999999999997644
No 158
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-34 Score=303.03 Aligned_cols=199 Identities=23% Similarity=0.358 Sum_probs=161.8
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc---cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK---GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 114 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYVDMR 114 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEEEEE
Confidence 345789999999999999865 6889999999755332 24678999999999999999999999954 558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.........
T Consensus 115 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 190 (309)
T 2h34_A 115 LINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAH-AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190 (309)
T ss_dssp CCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred ecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence 999999999998754 3789999999999999999999 999999999999999999999999999999876544333
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 334456899999999999899999999999999999999999999764
No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.3e-34 Score=301.10 Aligned_cols=198 Identities=26% Similarity=0.432 Sum_probs=169.4
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
.|.+.+.||+|+||.||+|... +|+.||+|.++.........+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~ 88 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE-STTHYYLVMQLV 88 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc-cCCEEEEEEEcC
Confidence 3456789999999999999865 78999999998665555677899999999999999999999995 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCccccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
++++|.+++.... .+++..+..++.|++.||.||| +.||+||||||+||++ +.++.+||+|||++.......
T Consensus 89 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~- 163 (304)
T 2jam_A 89 SGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLH-ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI- 163 (304)
T ss_dssp CSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT-
T ss_pred CCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc-
Confidence 9999999997754 3789999999999999999999 9999999999999999 788899999999987543321
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...+
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 211 (304)
T 2jam_A 164 --MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211 (304)
T ss_dssp --THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred --cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 123358999999999998999999999999999999999999997643
No 160
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.1e-34 Score=303.16 Aligned_cols=206 Identities=25% Similarity=0.374 Sum_probs=175.1
Q ss_pred HHHHhhcccccccceEEEEEEe------CCCCEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCe
Q 041878 535 LLCATAEIMGKSTYGTAYKATL------EDGSEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGE 606 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 606 (773)
-+|.+.+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++ ...+.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-~~~~~ 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC-TIGGP 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE-ecCCC
Confidence 3456778999999999999984 3467899999975543 3457789999999999 899999999999 45568
Q ss_pred EEEEEeecCCCCHHHHHhhcCC---------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC
Q 041878 607 KLLVFDFMPKGSLASFLHARGP---------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE 671 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~ 671 (773)
.++||||+++|+|.+++..... ...+++..+..++.||+.||.||| +.||+||||||+||+++.
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-SKNCIHRDLAARNILLTH 180 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEET
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCccceEEEcC
Confidence 8999999999999999987542 124899999999999999999999 999999999999999999
Q ss_pred CCCeEEeecCCccccccccccc-eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 672 KTNPRIADFGLSRLMTAAANTN-VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 672 ~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 9999999999998765443322 223346789999999988899999999999999999999 9999977543
No 161
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.3e-34 Score=308.10 Aligned_cols=202 Identities=24% Similarity=0.324 Sum_probs=172.4
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccC-----CCceEEeEEEEECCCCeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-----HPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~~~lV 610 (773)
|.+.++||+|+||+||+|.. .+++.||||+++.. ......+..|+.++++++ ||||+++++++.. .+..++|
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-~~~~~lv 114 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-YDHMCLI 114 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-TTEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-CCeeEEE
Confidence 45678999999999999987 47899999999642 334566788999999987 9999999999954 4589999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC-------------------
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE------------------- 671 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~------------------- 671 (773)
|||+ +++|.+++..... ..+++..+..++.||+.||+||| +.||+||||||+|||++.
T Consensus 115 ~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 115 FEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLR-KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp ECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 9999 9999999987642 34789999999999999999999 999999999999999976
Q ss_pred ------CCCeEEeecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCh
Q 041878 672 ------KTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745 (773)
Q Consensus 672 ------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~ 745 (773)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+.
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 267 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH 267 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH
Confidence 7889999999997644322 234689999999999999999999999999999999999999987654433
Q ss_pred HH
Q 041878 746 PQ 747 (773)
Q Consensus 746 ~~ 747 (773)
..
T Consensus 268 ~~ 269 (360)
T 3llt_A 268 LA 269 (360)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 162
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.6e-34 Score=306.87 Aligned_cols=195 Identities=29% Similarity=0.452 Sum_probs=167.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCc---ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTT---KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|...+.||+|+||+||+|.. .+|+.||||++..... ...+++.+|++++++++||||+++++++.. .+..++|||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 134 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVME 134 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEEEe
Confidence 45678899999999999986 5789999999975432 234578899999999999999999999954 558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|++ |+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 135 ~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 135 YCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp CCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred cCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 997 68888886543 34889999999999999999999 899999999999999999999999999999765432
Q ss_pred ceeeccCccccccccccC---CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSK---LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 257 (348)
T 1u5q_A 208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257 (348)
T ss_dssp --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 2346899999999873 5778999999999999999999999987543
No 163
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.8e-34 Score=296.79 Aligned_cols=197 Identities=26% Similarity=0.432 Sum_probs=168.4
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e 89 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILE 89 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-cCCEEEEEEe
Confidence 345789999999999999865 57799999986432 223567899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++.... .+++..+..++.||+.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH-~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-- 163 (279)
T 3fdn_A 90 YAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCH-SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 163 (279)
T ss_dssp CCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-TTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc--
Confidence 999999999998754 3789999999999999999999 9999999999999999999999999999886543322
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...+
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred -ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 223468999999999998999999999999999999999999997644
No 164
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.6e-34 Score=297.74 Aligned_cols=206 Identities=19% Similarity=0.264 Sum_probs=173.2
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||.||+|.. .+++.||||++..... ..++.+|++++++++|++++..++++....+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-
Confidence 45678999999999999986 5788999998754432 3457889999999999998888888866777889999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCcccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||++ +.++.+||+|||+++........
T Consensus 88 ~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 88 GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 999999998643 34899999999999999999999 9999999999999999 78899999999999876544321
Q ss_pred ------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHH
Q 041878 693 ------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQW 748 (773)
Q Consensus 693 ------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~ 748 (773)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+..+..+.
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 226 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh
Confidence 12244689999999999999999999999999999999999999988655443333
No 165
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.2e-34 Score=305.70 Aligned_cols=206 Identities=25% Similarity=0.438 Sum_probs=170.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCE----EEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSE----VAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
|...++||+|+||+||+|.+. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..++|
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v 92 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLV 92 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC--BSSEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCccEEE
Confidence 356789999999999999864 4554 7888875433 233456788999999999999999999883 3478999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++|+|.+++... ...+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLE-EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHH-HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHH-hCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999764 234788899999999999999999 9999999999999999999999999999998775443
Q ss_pred cc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCChHH
Q 041878 691 NT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLPQ 747 (773)
Q Consensus 691 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~~~ 747 (773)
.. ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......+..+
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 228 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD 228 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH
Confidence 22 2234457889999999998899999999999999999999 999998766554443
No 166
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=295.75 Aligned_cols=200 Identities=27% Similarity=0.467 Sum_probs=152.7
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|.. .+|+.||||.+.... ......+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e 91 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-DSNYVYLVLE 91 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-cCCeEEEEEe
Confidence 34578899999999999986 578999999996432 223477899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 167 (278)
T 3cok_A 92 MCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLH-SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE- 167 (278)
T ss_dssp CCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHH-HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred cCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-
Confidence 999999999998652 34789999999999999999999 99999999999999999999999999999987643322
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 216 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence 1223458999999999998889999999999999999999999998644
No 167
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.9e-34 Score=301.23 Aligned_cols=204 Identities=25% Similarity=0.367 Sum_probs=167.4
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc--cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK--GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
.+.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~ 84 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-RKRRLHLVFEYC 84 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECC
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-cCCeEEEEEEeC
Confidence 45688999999999999875 5899999998654332 2466889999999999999999999995 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+......... .
T Consensus 85 ~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~ 159 (311)
T 4agu_A 85 DHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCH-KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY-Y 159 (311)
T ss_dssp SEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc-c
Confidence 9999999887643 3789999999999999999999 999999999999999999999999999999876533221 2
Q ss_pred eeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHH
Q 041878 695 IATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQ 747 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~ 747 (773)
....+|+.|+|||.+.+ ..++.++||||+|+++|||++|+.||...+..+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 213 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 23468999999998865 678999999999999999999999998765444333
No 168
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.7e-34 Score=296.10 Aligned_cols=195 Identities=34% Similarity=0.543 Sum_probs=158.4
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCc----ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT----KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|...++||+|+||.||+|.+. ++.||||+++.... ...+.+.+|++++++++||||+++++++ ...+..++|||
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e 86 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-LKEPNLCLVME 86 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-CCC--CEEEEE
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-ecCCceEEEEE
Confidence 345689999999999999975 88999999875432 2356789999999999999999999999 45558899999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC---ceecCCCCCCEEeCC--------CCCeEEeecC
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN---MIHGNLTSSNVLLDE--------KTNPRIADFG 681 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~---iiH~Dik~~NIll~~--------~~~~kl~DfG 681 (773)
|+++++|.+++... .+++..+..++.|++.||+||| +.+ |+||||||+||+++. ++.+||+|||
T Consensus 87 ~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH-~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 87 FARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLH-DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp CCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHH-HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred cCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH-hCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 99999999998643 4789999999999999999999 777 999999999999986 6779999999
Q ss_pred CccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 682 LSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 682 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.+........ ....||+.|+|||.+.+..+++++||||+|+++|||++|+.||...+
T Consensus 162 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 218 (271)
T 3dtc_A 162 LAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218 (271)
T ss_dssp C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9986543322 23458999999999988899999999999999999999999997643
No 169
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-33 Score=296.71 Aligned_cols=202 Identities=19% Similarity=0.276 Sum_probs=172.3
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||.||+|.. .+|+.||||++..... ..++.+|+.++++++|++++..+.++....+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 34568899999999999986 5789999999865433 3468899999999999988877777766677889999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCcccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||++ +.++.+||+|||++.........
T Consensus 88 ~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 88 GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 999999998543 34899999999999999999999 9999999999999999 48889999999999876544321
Q ss_pred ------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 041878 693 ------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMD 744 (773)
Q Consensus 693 ------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~ 744 (773)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+..+
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh
Confidence 1234468999999999999999999999999999999999999998755443
No 170
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-34 Score=299.08 Aligned_cols=205 Identities=27% Similarity=0.462 Sum_probs=170.1
Q ss_pred HHHHHhhcccccccceEEEEEEeC-CC---CEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 534 DLLCATAEIMGKSTYGTAYKATLE-DG---SEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 534 ~l~~~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
...+...++||+|+||+||+|.+. ++ ..||+|.+..... ...+.+.+|+.++++++||||+++++++.......+
T Consensus 20 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 334456789999999999999853 23 3699999975433 345778999999999999999999999966555569
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||+.+|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLA-EQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 9999999999999998642 34788999999999999999999 89999999999999999999999999999986644
Q ss_pred ccc---cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCC-CCCCC
Q 041878 689 AAN---TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP-GEPMN 741 (773)
Q Consensus 689 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P-~~~~~ 741 (773)
... .......+|+.|+|||.+.+..++.++||||+|+++|||++|+.| |...+
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~ 233 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID 233 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC
Confidence 321 122234578899999999999999999999999999999996555 44433
No 171
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.9e-33 Score=294.22 Aligned_cols=197 Identities=28% Similarity=0.518 Sum_probs=166.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCccc-------HHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKG-------QKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
|.+.+.||+|+||+||+|.+ .+++.||+|++....... .+.+.+|++++++++||||+++++++. .. .+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~--~~ 97 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH-NP--PR 97 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET-TT--TE
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec-CC--Ce
Confidence 45678999999999999986 478999999996543221 167899999999999999999999983 32 37
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCEEeCCCCC-----eEEeecC
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN--MIHGNLTSSNVLLDEKTN-----PRIADFG 681 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~--iiH~Dik~~NIll~~~~~-----~kl~DfG 681 (773)
+||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH-~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH-TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHH-hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 9999999999999887653 35899999999999999999999 888 999999999999988876 9999999
Q ss_pred CccccccccccceeeccCcccccccccc--CCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC
Q 041878 682 LSRLMTAAANTNVIATAGTLGYRAPELS--KLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743 (773)
Q Consensus 682 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~ 743 (773)
+++.... ......||+.|+|||.+ ....+++++||||+||++|||++|+.||......
T Consensus 175 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 234 (287)
T 4f0f_A 175 LSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234 (287)
T ss_dssp TCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC
T ss_pred ccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc
Confidence 9875432 23345689999999998 4456789999999999999999999999865543
No 172
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.9e-34 Score=317.98 Aligned_cols=199 Identities=21% Similarity=0.356 Sum_probs=154.9
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECCC----CeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK----GEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~~l 609 (773)
|.+.++||+|+||+||+|... +++.||||++... .....+++.+|++++++++||||+++++++.... ...|+
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 456789999999999999864 7899999999653 2334577899999999999999999999985432 46899
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+ +++|.+++... ..+++..+..++.||+.||+||| +.|||||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH-~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 135 VLEIA-DSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVH-SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp EECCC-SEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred EEecc-ccchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHH-hCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 99998 57999999764 34899999999999999999999 999999999999999999999999999999876432
Q ss_pred cc--------------------------cceeeccCcccccccccc-CCCCCCcchhhHHHHHHHHHHHc----------
Q 041878 690 AN--------------------------TNVIATAGTLGYRAPELS-KLKNANTKTDVYSLGVIILELLT---------- 732 (773)
Q Consensus 690 ~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws~Gv~l~el~t---------- 732 (773)
.. .......||+.|+|||++ ....++.++||||+||++|||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~ 289 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA 289 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGG
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccc
Confidence 21 112344689999999976 56679999999999999999999
Q ss_pred -CCCCCCCC
Q 041878 733 -GKSPGEPM 740 (773)
Q Consensus 733 -g~~P~~~~ 740 (773)
|+.||.+.
T Consensus 290 ~~~p~f~g~ 298 (458)
T 3rp9_A 290 DRGPLFPGS 298 (458)
T ss_dssp GCCCSCC--
T ss_pred cccccCCCC
Confidence 66666553
No 173
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-34 Score=306.00 Aligned_cols=196 Identities=20% Similarity=0.335 Sum_probs=162.3
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccCC--CceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHH--PNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++| +||+++++++. ..+..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVME 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-eCCEEEEEEe
Confidence 35678999999999999998889999999997543 2334678999999999987 99999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+ .+++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+|||++ ++.+||+|||+++........
T Consensus 90 ~-~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH-~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 90 C-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp C-CSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred C-CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 5 5889999998753 3789999999999999999999 99999999999999997 577999999999876544322
Q ss_pred -ceeeccCccccccccccCC-----------CCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 693 -NVIATAGTLGYRAPELSKL-----------KNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 693 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 2234569999999998754 6789999999999999999999999975
No 174
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.6e-33 Score=295.93 Aligned_cols=198 Identities=22% Similarity=0.363 Sum_probs=172.1
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
.+.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++. ..+..++||||
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~ 96 (294)
T 2rku_A 18 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEEC
T ss_pred EEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-cCCEEEEEEec
Confidence 45789999999999999875 57899999986542 234567889999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........ .
T Consensus 97 ~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~ 171 (294)
T 2rku_A 97 CRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-R 171 (294)
T ss_dssp CTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc-c
Confidence 99999999988753 3789999999999999999999 99999999999999999999999999999987643322 2
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 219 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 233468999999999998899999999999999999999999997643
No 175
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.3e-34 Score=315.42 Aligned_cols=198 Identities=17% Similarity=0.262 Sum_probs=160.3
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEeccc---CcccHHHHHHHH---HHHHccCCCceEEeE-------EEEEC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK---TTKGQKEFEAEA---AAIGKIHHPNLLALR-------AYYLG 602 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~~~~ 602 (773)
|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ +++..
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~ 154 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence 34568999999999999996 56999999999743 334467889999 555566899999998 66643
Q ss_pred CCC----------------eEEEEEeecCCCCHHHHHhhcCC----CCccCHHHHHHHHHHHHHHHHHhccCCCceecCC
Q 041878 603 PKG----------------EKLLVFDFMPKGSLASFLHARGP----ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNL 662 (773)
Q Consensus 603 ~~~----------------~~~lV~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Di 662 (773)
... ..++||||+ +|+|.+++..... ...+++..++.++.||+.||+||| +.||+||||
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDi 232 (377)
T 3byv_A 155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH-HYGLVHTYL 232 (377)
T ss_dssp TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH-HTTEECSCC
T ss_pred cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH-hCCeecCCC
Confidence 321 378999999 6899999986421 123446888899999999999999 899999999
Q ss_pred CCCCEEeCCCCCeEEeecCCccccccccccceeeccCccccccccccCCC-----------CCCcchhhHHHHHHHHHHH
Q 041878 663 TSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLK-----------NANTKTDVYSLGVIILELL 731 (773)
Q Consensus 663 k~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dvws~Gv~l~el~ 731 (773)
||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 99999999999999999999985332 2234457 999999998877 8999999999999999999
Q ss_pred cCCCCCCCCC
Q 041878 732 TGKSPGEPMN 741 (773)
Q Consensus 732 tg~~P~~~~~ 741 (773)
+|+.||...+
T Consensus 308 tg~~Pf~~~~ 317 (377)
T 3byv_A 308 CADLPITKDA 317 (377)
T ss_dssp HSSCCC----
T ss_pred HCCCCCcccc
Confidence 9999997744
No 176
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.4e-33 Score=302.11 Aligned_cols=199 Identities=22% Similarity=0.360 Sum_probs=172.6
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++|+||+++++++. ..+..++|||
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e 121 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCeEEEEEe
Confidence 345789999999999999875 57899999987542 234567889999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 122 ~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 122 LCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp CCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred cCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 999999999988753 3789999999999999999999 99999999999999999999999999999987643322
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 245 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence 2234568999999999998899999999999999999999999997643
No 177
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=328.41 Aligned_cols=198 Identities=27% Similarity=0.456 Sum_probs=166.6
Q ss_pred ccccccceEEEEEEeC---CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 542 IMGKSTYGTAYKATLE---DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 542 ~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
.||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++||||+++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCC
Confidence 7999999999999864 45679999998653 3356889999999999999999999999954 4689999999999
Q ss_pred CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc--ee
Q 041878 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN--VI 695 (773)
Q Consensus 618 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~--~~ 695 (773)
+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......... ..
T Consensus 421 ~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH-~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 421 PLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLE-EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp BHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred cHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH-HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 999999764 345899999999999999999999 9999999999999999999999999999998765432211 12
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMD 744 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~ 744 (773)
...+++.|+|||++....++.++|||||||++|||+| |+.||...+..+
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~ 547 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence 2345689999999998999999999999999999998 999998765433
No 178
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-33 Score=319.03 Aligned_cols=199 Identities=29% Similarity=0.452 Sum_probs=167.4
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
.|.+.++||+|+||+||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e 116 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-DKRNYYLVME 116 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEe
Confidence 4567889999999999999875 68899999997543 334678899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC---CCeEEeecCCccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMTAA 689 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~a~~~~~~ 689 (773)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||++.. +.+||+|||++......
T Consensus 117 ~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLH-KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999999999988754 3789999999999999999999 9999999999999999764 45999999999876543
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
.. .....||+.|+|||++. ..++.++||||+||++|||++|+.||...+.
T Consensus 193 ~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 242 (494)
T 3lij_A 193 KK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD 242 (494)
T ss_dssp BC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 22 23456999999999876 5699999999999999999999999976543
No 179
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=305.90 Aligned_cols=208 Identities=24% Similarity=0.415 Sum_probs=165.8
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc-cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK-GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.+.||+|+||+||+|... +++.||||+++..... ....+.+|++++++++||||+++++++. ..+..++||||++
T Consensus 5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-TEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-CSSCEEEEEECCS
T ss_pred EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-eCCEEEEEecccc
Confidence 45688999999999999875 7899999999654322 1224567999999999999999999995 4558999999997
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
|+|.+++.... ..+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||+++....... ...
T Consensus 84 -~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 158 (324)
T 3mtl_A 84 -KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH-RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYD 158 (324)
T ss_dssp -EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred -cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-ccc
Confidence 59999988753 34789999999999999999999 99999999999999999999999999999976543322 222
Q ss_pred eccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 041878 696 ATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVAS 751 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~ 751 (773)
...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+.+
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 215 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 3468999999998865 6789999999999999999999999987665444444433
No 180
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-33 Score=318.68 Aligned_cols=198 Identities=27% Similarity=0.397 Sum_probs=169.9
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
+|.+.++||+|+||+||+|... +++.||||++... .......+.+|++++++++||||+++++++. ..+..++|||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e 101 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGE 101 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-cCCEEEEEEE
Confidence 3566789999999999999875 7899999999643 2345678999999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC---CCCCeEEeecCCccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD---EKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~---~~~~~kl~DfG~a~~~~~~ 689 (773)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||++ .++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 102 LYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 999999999987754 3889999999999999999999 99999999999999995 4567999999999866433
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
. ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.+
T Consensus 178 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 226 (486)
T 3mwu_A 178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (486)
T ss_dssp ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 2234569999999999875 59999999999999999999999997654
No 181
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.4e-33 Score=305.34 Aligned_cols=198 Identities=26% Similarity=0.464 Sum_probs=169.6
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc--------cHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK--------GQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGE 606 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 606 (773)
|.+.++||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+.+++++ +||||+++++++. ..+.
T Consensus 96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~ 174 (365)
T 2y7j_A 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE-SSSF 174 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-BSSE
T ss_pred cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe-eCCE
Confidence 445689999999999999975 7999999998754311 135678899999999 7999999999984 4568
Q ss_pred EEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccc
Q 041878 607 KLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 686 (773)
.++||||+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 175 ~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH-~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLH-ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 999999999999999998653 3889999999999999999999 899999999999999999999999999999876
Q ss_pred ccccccceeeccCccccccccccC------CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 687 TAAANTNVIATAGTLGYRAPELSK------LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 687 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 251 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 309 (365)
T 2y7j_A 251 EPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309 (365)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence 54322 23456999999999875 3468899999999999999999999997643
No 182
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-33 Score=304.57 Aligned_cols=210 Identities=24% Similarity=0.352 Sum_probs=173.0
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECC-------CCe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-------KGE 606 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------~~~ 606 (773)
|.+.++||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++... .+.
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 98 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 98 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CE
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCce
Confidence 45678999999999999987 5789999999865432 2356788999999999999999999998653 346
Q ss_pred EEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccc
Q 041878 607 KLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 686 (773)
.++||||+++ +|.+.+.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 99 ~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 99 IYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH-HCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 8999999974 8888776543 34899999999999999999999 999999999999999999999999999999876
Q ss_pred ccccc---cceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q 041878 687 TAAAN---TNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVA 750 (773)
Q Consensus 687 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 750 (773)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....+.
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 242 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 43221 22234568999999998865 568999999999999999999999998765444433333
No 183
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.3e-34 Score=320.13 Aligned_cols=199 Identities=28% Similarity=0.443 Sum_probs=172.2
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
+|.+.++||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++. ..+..++||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~ 105 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVG 105 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEE
Confidence 4566789999999999999875 78999999996542 345678999999999999999999999995 455899999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCcccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~ 688 (773)
||+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||+ +.++.+||+|||+++....
T Consensus 106 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999998653 3889999999999999999999 9999999999999999 5678899999999986654
Q ss_pred ccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||...+.
T Consensus 182 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 232 (484)
T 3nyv_A 182 SKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 232 (484)
T ss_dssp CCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH
Confidence 322 223469999999998865 699999999999999999999999976543
No 184
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.8e-34 Score=293.89 Aligned_cols=196 Identities=24% Similarity=0.420 Sum_probs=167.3
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECC-CCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-KGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~lV~e~ 613 (773)
|.+.+.||+|+||.||+|.+. ++.||||+++... ....+.+.+|+.++++++||||+++++++... .+..++||||
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 356789999999999999985 8899999997543 33456799999999999999999999999554 2578999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN--MIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~--iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
+++|+|.+++.... ...+++..+..++.||+.||+||| +.+ |+||||||+||+++.++.++++|||++......
T Consensus 91 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH-~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~-- 166 (271)
T 3kmu_A 91 MPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-- 166 (271)
T ss_dssp CTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHT-TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT--
T ss_pred cCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHh-cCCCceecCCCccceEEEcCCcceeEEeccceeeeccc--
Confidence 99999999998753 235899999999999999999999 888 999999999999999999999999887543222
Q ss_pred cceeeccCccccccccccCCCCCCc---chhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANT---KTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...+|+.|+|||.+.+..++. ++|||||||++|||++|+.||...+
T Consensus 167 ----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 215 (271)
T 3kmu_A 167 ----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215 (271)
T ss_dssp ----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred ----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 235899999999987655544 7999999999999999999997643
No 185
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-34 Score=307.26 Aligned_cols=195 Identities=25% Similarity=0.380 Sum_probs=162.2
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCC-----CeEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-----GEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~~ 608 (773)
|...+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|++++++++||||+++++++.... ...+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 34568899999999999986 478999999996532 233567889999999999999999999995432 3569
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||+ +++|.++++.. .++...+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 107 lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIH-AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH-HCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 999999 88999999863 3788999999999999999999 99999999999999999999999999999986543
Q ss_pred ccccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
. .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+
T Consensus 181 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 230 (367)
T 1cm8_A 181 E----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230 (367)
T ss_dssp S----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 223468999999998876 789999999999999999999999997654
No 186
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-33 Score=308.03 Aligned_cols=197 Identities=20% Similarity=0.330 Sum_probs=163.8
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccC--CCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIH--HPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++.. .+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~E 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEEEEe
Confidence 45678999999999999998889999999996543 334577899999999997 5999999999954 458999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++........
T Consensus 137 -~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH-~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp -CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHH-TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred -cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 56889999998754 4788899999999999999999 99999999999999995 578999999999876543322
Q ss_pred -ceeeccCccccccccccCC-----------CCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 693 -NVIATAGTLGYRAPELSKL-----------KNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 693 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 270 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhh
Confidence 1234569999999998754 46889999999999999999999999753
No 187
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.7e-34 Score=303.18 Aligned_cols=205 Identities=25% Similarity=0.430 Sum_probs=174.0
Q ss_pred HHHhhcccccccceEEEEEEe------CCCCEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeE
Q 041878 536 LCATAEIMGKSTYGTAYKATL------EDGSEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEK 607 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 607 (773)
.|.+.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|+.+++++ +||||+++++++.......
T Consensus 28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 107 (316)
T 2xir_A 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 107 (316)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCce
Confidence 356778999999999999974 3467899999976543 3356789999999999 6999999999996666678
Q ss_pred EEEEeecCCCCHHHHHhhcCC-------------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC
Q 041878 608 LLVFDFMPKGSLASFLHARGP-------------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN 674 (773)
Q Consensus 608 ~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~ 674 (773)
++||||+++|+|.+++..... ...+++..+..++.||+.||.||| +.||+||||||+||+++.++.
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH-hCCcccccCccceEEECCCCC
Confidence 999999999999999987542 123789999999999999999999 999999999999999999999
Q ss_pred eEEeecCCcccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 675 PRIADFGLSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 675 ~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
+||+|||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||+| |+.||....
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999876543322 2223457889999999988899999999999999999998 999997654
No 188
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-33 Score=313.27 Aligned_cols=196 Identities=23% Similarity=0.394 Sum_probs=162.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEeccc--CcccHHHHHHHHHHHHccCCCceEEeEEEEECCC----CeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK--TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK----GEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~~l 609 (773)
|.+.++||+|+||.||+|... +++.||||++... .....+++.+|++++++++|+||+++++++.... ...|+
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 345789999999999999864 6788999999754 2334578899999999999999999999985543 47899
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||++ |+|.++++.. ..+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH-~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIH-ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp EEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred EEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 999996 6999999864 34899999999999999999999 999999999999999999999999999999876543
Q ss_pred ccc---------------------ceeeccCcccccccccc-CCCCCCcchhhHHHHHHHHHHHcCCCCC
Q 041878 690 ANT---------------------NVIATAGTLGYRAPELS-KLKNANTKTDVYSLGVIILELLTGKSPG 737 (773)
Q Consensus 690 ~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dvws~Gv~l~el~tg~~P~ 737 (773)
... ......||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 221 12455789999999985 5667999999999999999999854444
No 189
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-34 Score=296.46 Aligned_cols=197 Identities=26% Similarity=0.451 Sum_probs=169.2
Q ss_pred cccccccceEEEEEEeC---CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 541 EIMGKSTYGTAYKATLE---DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++||||+++++++. .+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEEEEeCCC
Confidence 48999999999999853 57789999997653 334677999999999999999999999993 3468999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc--ce
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT--NV 694 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~ 694 (773)
++|.+++... ...+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++......... ..
T Consensus 94 ~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 94 GPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp EEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHH-HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 9999999754 234899999999999999999999 999999999999999999999999999999876543321 12
Q ss_pred eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
....+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||...+.
T Consensus 171 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 219 (287)
T 1u59_A 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219 (287)
T ss_dssp CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT
T ss_pred ccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 23346889999999988889999999999999999998 9999977554
No 190
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.7e-34 Score=299.08 Aligned_cols=192 Identities=25% Similarity=0.398 Sum_probs=165.7
Q ss_pred HHhhcccccccceEEEEEEeCC-C-------CEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATLED-G-------SEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~-g-------~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
|.+.+.||+|+||+||+|.... + ..||+|.+........+.+.+|++++++++||||+++++++ ...+..+
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~ 88 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC-VCGDENI 88 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-CCTTCCE
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-EeCCCCE
Confidence 4567899999999999998642 3 46999999877666778899999999999999999999999 4555889
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC--------eEEeec
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN--------PRIADF 680 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~--------~kl~Df 680 (773)
+||||+++|+|.+++.... ..+++..+..++.||+.||.||| +.||+||||||+||+++.++. +||+||
T Consensus 89 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLE-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHh-hCCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 9999999999999998753 34789999999999999999999 999999999999999998887 999999
Q ss_pred CCccccccccccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCC
Q 041878 681 GLSRLMTAAANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPG 737 (773)
Q Consensus 681 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~ 737 (773)
|.+....... ...+|+.|+|||.+.+ ..++.++|||||||++|||++|..|+
T Consensus 166 g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 166 GISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CSCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 9987553322 2347889999999877 77899999999999999999965544
No 191
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-34 Score=301.97 Aligned_cols=205 Identities=27% Similarity=0.481 Sum_probs=165.9
Q ss_pred HHhhcccccccceEEEEEEeC-CCCE----EEEEEeccc-CcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSE----VAVKRLREK-TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
|.+.++||+|+||.||+|.+. +++. ||+|.+... .....+++.+|+.++++++||||+++++++... ..++|
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~v 94 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--TVQLI 94 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS--SEEEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC--CceEE
Confidence 456789999999999999864 4554 577777543 344578899999999999999999999999643 48899
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
+||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp ECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHh-hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 99999999999998753 34889999999999999999999 9999999999999999999999999999998765433
Q ss_pred cc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCChH
Q 041878 691 NT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMDLP 746 (773)
Q Consensus 691 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~~~ 746 (773)
.. ......+|+.|+|||.+.+..++.++||||+||++|||++ |+.||...+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~ 229 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 22 2223456889999999999999999999999999999999 99999876554433
No 192
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.5e-34 Score=328.68 Aligned_cols=196 Identities=27% Similarity=0.440 Sum_probs=165.4
Q ss_pred cccccccceEEEEEEeC---CCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 541 EIMGKSTYGTAYKATLE---DGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++. . +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-A-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-S-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-c-CCEEEEEEccC
Confidence 57999999999999653 467899999976432 34678999999999999999999999994 3 36889999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc--c
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT--N 693 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~ 693 (773)
+|+|.++++... .+++..+..++.||+.||+||| +.+||||||||+|||++.++.+||+|||+++........ .
T Consensus 453 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH-~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 453 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHH-HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 999999998643 4789999999999999999999 999999999999999999999999999999876543321 2
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
.....+|+.|+|||++....++.++|||||||++|||++ |+.||...+.
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~ 578 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 223346789999999998999999999999999999998 9999987554
No 193
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.7e-34 Score=297.35 Aligned_cols=198 Identities=27% Similarity=0.524 Sum_probs=164.2
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
|.+.+.||+|+||.||+|... |+.||||.++... ..+.+.+|++++++++||||+++++++....+..++||||+++
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 99 (278)
T 1byg_A 23 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 99 (278)
T ss_dssp EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred ceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence 456789999999999999875 8899999997543 4678899999999999999999999986666678999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceee
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIA 696 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 696 (773)
++|.+++.... ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........ .
T Consensus 100 ~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----~ 173 (278)
T 1byg_A 100 GSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----T 173 (278)
T ss_dssp EEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred CCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCcceEEEeCCCcEEEeecccccccccccc----C
Confidence 99999998653 223688899999999999999999 99999999999999999999999999999876543221 2
Q ss_pred ccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCC
Q 041878 697 TAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGM 743 (773)
Q Consensus 697 ~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~ 743 (773)
..+++.|+|||.+.+..++.++||||+|+++|||+| |+.||...+..
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 221 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 221 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 347889999999988899999999999999999998 99999765443
No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.1e-34 Score=304.15 Aligned_cols=203 Identities=23% Similarity=0.354 Sum_probs=158.3
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEE-------CCCCe
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYL-------GPKGE 606 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-------~~~~~ 606 (773)
+|.+.++||+|+||.||+|... +++.||||++..........+.+|+.+++++. ||||+++++++. .....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 4567789999999999999864 78999999997766666778999999999996 999999999984 22335
Q ss_pred EEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCEEeCCCCCeEEeecCCcc
Q 041878 607 KLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN--MIHGNLTSSNVLLDEKTNPRIADFGLSR 684 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~--iiH~Dik~~NIll~~~~~~kl~DfG~a~ 684 (773)
.++||||++ |+|.+++........+++..++.++.||+.||+||| +.+ |+||||||+||+++.++.+||+|||+++
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH-TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 789999995 799999876444455899999999999999999999 888 9999999999999999999999999998
Q ss_pred cccccccc-----------ceeeccCcccccccccc---CCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 685 LMTAAANT-----------NVIATAGTLGYRAPELS---KLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 685 ~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
........ ......+|+.|+|||++ .+..++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 256 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence 76543221 11134589999999988 5677899999999999999999999999763
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-33 Score=293.19 Aligned_cols=198 Identities=26% Similarity=0.437 Sum_probs=163.6
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|+.++++++||||+++++++. ..+..++|||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e 91 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-TPTDFFMVME 91 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEE
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-cCCeEEEEEe
Confidence 345789999999999999875 78999999996532 234568899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 92 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 166 (276)
T 2h6d_A 92 YVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 166 (276)
T ss_dssp CCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred ccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc-
Confidence 999999999998754 3789999999999999999999 89999999999999999999999999999987644322
Q ss_pred ceeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....+|+.|+|||.+.+..+ +.++||||+|+++|||++|+.||...+
T Consensus 167 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 215 (276)
T 2h6d_A 167 -LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 223458999999999887765 689999999999999999999997643
No 196
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.9e-33 Score=292.33 Aligned_cols=201 Identities=23% Similarity=0.357 Sum_probs=172.3
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~ 87 (276)
T 2yex_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYC 87 (276)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECC
T ss_pred eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-cCCEEEEEEEec
Confidence 456789999999999999875 78999999997543 334578899999999999999999999995 455889999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc-cc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN-TN 693 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~-~~ 693 (773)
++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........ ..
T Consensus 88 ~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 88 SGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp TTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH-hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999999988753 34889999999999999999999 99999999999999999999999999999986643322 11
Q ss_pred eeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
.....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||.....
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 213 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch
Confidence 234568999999999887665 7799999999999999999999987543
No 197
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.2e-33 Score=293.29 Aligned_cols=197 Identities=26% Similarity=0.442 Sum_probs=171.4
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++. ..+..++|||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e 94 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-DRKRIYLMLE 94 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-cCCEEEEEEE
Confidence 456789999999999999875 57789999996432 223567899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 95 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 95 FAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred eCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 999999999998764 3789999999999999999999 9999999999999999999999999999987554322
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....|++.|+|||.+.+..++.++||||+|+++|||++|+.||...+
T Consensus 169 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 169 -RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp -BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred -cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 223468999999999998999999999999999999999999997643
No 198
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-33 Score=301.61 Aligned_cols=201 Identities=25% Similarity=0.500 Sum_probs=164.1
Q ss_pred HHhhcccccccceEEEEEEeCC-----CCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLED-----GSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
+...++||+|+||.||+|.... +..||||.++.... ....++.+|++++++++||||+++++++ ...+..++|
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~lv 124 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-SKYKPMMII 124 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSSEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-ecCCCcEEE
Confidence 3456889999999999998642 23599999975533 3456789999999999999999999999 555689999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++|+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLA-NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp EECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 99999999999998752 34889999999999999999999 8999999999999999999999999999998765432
Q ss_pred cc--ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 691 NT--NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 691 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
.. ......+|+.|+|||.+....++.++|||||||++|||++ |+.||...+
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 255 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC
Confidence 21 1222346789999999988899999999999999999999 999997643
No 199
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.2e-33 Score=311.69 Aligned_cols=198 Identities=24% Similarity=0.382 Sum_probs=159.7
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC--------cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--------TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEK 607 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 607 (773)
|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++. . +..
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~-~~~ 214 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A-EDY 214 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S-SEE
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c-Cce
Confidence 456789999999999999864 68999999996532 112235889999999999999999999984 3 368
Q ss_pred EEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC---CeEEeecCCcc
Q 041878 608 LLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIADFGLSR 684 (773)
Q Consensus 608 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~---~~kl~DfG~a~ 684 (773)
++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++ .+||+|||+++
T Consensus 215 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH-~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 99999999999999887643 4899999999999999999999 99999999999999997554 59999999998
Q ss_pred ccccccccceeeccCccccccccccC---CCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 685 LMTAAANTNVIATAGTLGYRAPELSK---LKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 685 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
...... ......||+.|+|||++. ...++.++||||+||++|||++|+.||.....
T Consensus 291 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 291 ILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp SCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred ecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 765332 223456899999999875 36788899999999999999999999986443
No 200
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.5e-33 Score=303.72 Aligned_cols=208 Identities=24% Similarity=0.373 Sum_probs=174.0
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCC----CeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK----GEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~~lV 610 (773)
|.+.++||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.... ...++|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 456789999999999999865 678899999975432 33467899999999999999999999995432 468999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||++ |+|.+++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 109 ~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 109 QDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 99996 5999998764 3789999999999999999999 9999999999999999999999999999998765443
Q ss_pred ccc--eeeccCccccccccccC-CCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q 041878 691 NTN--VIATAGTLGYRAPELSK-LKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVA 750 (773)
Q Consensus 691 ~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 750 (773)
... .....||+.|+|||++. ...++.++||||+||++|||++|+.||...+..+..+.+.
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 245 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence 221 23346899999999764 4558999999999999999999999998776555544443
No 201
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.6e-33 Score=316.90 Aligned_cols=198 Identities=31% Similarity=0.440 Sum_probs=168.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-------------ccHHHHHHHHHHHHccCCCceEEeEEEEEC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-------------KGQKEFEAEAAAIGKIHHPNLLALRAYYLG 602 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 602 (773)
|.+.++||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~- 116 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE- 116 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE-
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-
Confidence 456789999999999999865 678999999975421 23567899999999999999999999995
Q ss_pred CCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC---CeEEee
Q 041878 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT---NPRIAD 679 (773)
Q Consensus 603 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~---~~kl~D 679 (773)
..+..++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|
T Consensus 117 ~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 117 DKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLH-KHNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred cCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 5558999999999999999998754 3899999999999999999999 99999999999999999876 599999
Q ss_pred cCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 680 FGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 680 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
||++....... ......||+.|+|||++. ..++.++||||+||++|||++|+.||...+.
T Consensus 193 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 252 (504)
T 3q5i_A 193 FGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND 252 (504)
T ss_dssp CTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99998765432 223456999999999887 5699999999999999999999999976543
No 202
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.5e-34 Score=303.69 Aligned_cols=201 Identities=24% Similarity=0.415 Sum_probs=174.3
Q ss_pred HHHhhcccccccceEEEEEEe-----CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEEC-CCCeEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATL-----EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG-PKGEKLL 609 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~~l 609 (773)
.|.+.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++|+||+++++++.. .....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 345678999999999999984 3678899999987766667789999999999999999999999864 3456889
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999998753 24899999999999999999999 999999999999999999999999999999876543
Q ss_pred ccc--ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 690 ANT--NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 690 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
... ......+|+.|+|||++.+..++.++||||+|+++|||++|+.||..
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 322 12234578889999999888899999999999999999999999854
No 203
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.5e-34 Score=304.26 Aligned_cols=204 Identities=22% Similarity=0.380 Sum_probs=172.0
Q ss_pred HHHhhcccccccceEEEEEEeC------CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE------DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 608 (773)
+|.+.+.||+|+||.||+|... +++.||||.+..... ....++.+|+.++++++||||+++++++ ...+..+
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~ 104 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-SQGQPTL 104 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE-CSSSSCE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE-ccCCccE
Confidence 3566789999999999999754 367899999975433 3455789999999999999999999999 5556889
Q ss_pred EEEeecCCCCHHHHHhhcC-------CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecC
Q 041878 609 LVFDFMPKGSLASFLHARG-------PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG 681 (773)
+||||+++|+|.++++... ....+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH-HCCCccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999997642 1234688999999999999999999 8999999999999999999999999999
Q ss_pred Ccccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 682 LSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 682 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
+++........ ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 245 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC
Confidence 99866443221 1122346889999999988899999999999999999999 899987643
No 204
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.3e-33 Score=299.91 Aligned_cols=199 Identities=23% Similarity=0.366 Sum_probs=165.4
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc--cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK--GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|...++||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++++++||||+++++++. ..+..++||||
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~ 105 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-KKKRWYLVFEF 105 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEEC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-cCCEEEEEEec
Confidence 456789999999999999875 5899999998654332 3456789999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
+++++|.++..... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||.+........ .
T Consensus 106 ~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH-~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 180 (331)
T 4aaa_A 106 VDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCH-SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-V 180 (331)
T ss_dssp CSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred CCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH-HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-c
Confidence 99999988876543 3889999999999999999999 99999999999999999999999999999976644322 2
Q ss_pred eeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+.+. .++.++||||+||++|||++|+.||...+
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 229 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 2234689999999988765 78999999999999999999999997654
No 205
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.5e-33 Score=294.63 Aligned_cols=198 Identities=25% Similarity=0.439 Sum_probs=173.0
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 102 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYL 102 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEEeC
Confidence 45578899999999999986 468999999997553 3446789999999999999999999999954 55899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
++++|.+++... .+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||.+........ ..
T Consensus 103 ~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 176 (303)
T 3a7i_A 103 GGGSALDLLEPG----PLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 176 (303)
T ss_dssp TTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CB
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCChheEEECCCCCEEEeecccceecCcccc-cc
Confidence 999999998753 3789999999999999999999 99999999999999999999999999999987654322 22
Q ss_pred eeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 223 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence 34468999999999998999999999999999999999999997643
No 206
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.3e-34 Score=307.57 Aligned_cols=198 Identities=21% Similarity=0.408 Sum_probs=171.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~ 113 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHM 113 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-ETTEEEEEECCC
T ss_pred ceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-ECCEEEEEEECC
Confidence 455789999999999999875 78999999997653 334567899999999999999999999995 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeCCCCCeEEeecCCccccccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
++++|.+++.... .+++..+..++.|++.||.||| +. ||+||||||+||+++.++.+||+|||++.......
T Consensus 114 ~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh-~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 186 (360)
T 3eqc_A 114 DGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 186 (360)
T ss_dssp TTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH-HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence 9999999998764 3789999999999999999999 64 99999999999999999999999999987654322
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 235 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 2234689999999999999999999999999999999999999986553
No 207
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-33 Score=297.98 Aligned_cols=199 Identities=23% Similarity=0.408 Sum_probs=168.9
Q ss_pred HHhhcccccccceEEEEEEe-----CCCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCC-CeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-----EDGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-GEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~l 609 (773)
+...+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++++++||||+++++++.... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 45678999999999999983 368899999997543 334578999999999999999999999996543 46889
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 103 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhh-cCCcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999999997653 34889999999999999999999 999999999999999999999999999999876544
Q ss_pred ccc--ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCC
Q 041878 690 ANT--NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738 (773)
Q Consensus 690 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~ 738 (773)
... ......+|..|+|||.+.+..++.++||||+|+++|||+||+.|+.
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 321 2223457888999999988889999999999999999999999864
No 208
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=8.9e-33 Score=289.58 Aligned_cols=195 Identities=26% Similarity=0.444 Sum_probs=166.8
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECC---CCeEEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP---KGEKLLVF 611 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---~~~~~lV~ 611 (773)
.+.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++... ....++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 45678999999999999864 67899999987542 33456789999999999999999999988542 34689999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCC--ceecCCCCCCEEeC-CCCCeEEeecCCcccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEEN--MIHGNLTSSNVLLD-EKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~--iiH~Dik~~NIll~-~~~~~kl~DfG~a~~~~~ 688 (773)
||+++++|.+++.... .+++..+..++.||+.||.||| +.+ |+||||||+||+++ .++.+||+|||++.....
T Consensus 109 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHH-cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999998753 3789999999999999999999 888 99999999999998 788999999999975433
Q ss_pred ccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
. ......||+.|+|||.+. ..++.++||||+|+++|||++|+.||...
T Consensus 185 ~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 232 (290)
T 1t4h_A 185 S---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp T---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred c---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence 2 223456899999999876 55899999999999999999999999763
No 209
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-33 Score=309.10 Aligned_cols=199 Identities=23% Similarity=0.401 Sum_probs=162.3
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCC-----eEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG-----EKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~~lV~ 611 (773)
|...++||+|+||+||+|....+..||+|++...... ..+|++++++++||||+++++++..... ..++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 4567899999999999999877777999988643322 2369999999999999999999854332 378999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC-CCCCeEEeecCCcccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD-EKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~-~~~~~kl~DfG~a~~~~~~~ 690 (773)
||++++.+............+++..+..++.||++||+||| +.||+||||||+|||++ .++.+||+|||+++......
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 99987544443332223445899999999999999999999 99999999999999999 78999999999998764333
Q ss_pred ccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 691 NTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
. .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.
T Consensus 197 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 247 (394)
T 4e7w_A 197 P--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247 (394)
T ss_dssp C--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 2 223468999999998865 4589999999999999999999999977653
No 210
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-33 Score=294.71 Aligned_cols=198 Identities=29% Similarity=0.498 Sum_probs=158.2
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.++||+|+||+||+|... ..||||+++... ....+.+.+|++++++++||||+++++++ . .+..++||||+
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~-~~~~~lv~e~~ 101 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T-APQLAIVTQWC 101 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-C-SSSCEEEEECC
T ss_pred eeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-c-CCccEEEEEec
Confidence 456789999999999999864 369999997543 23456789999999999999999999976 3 34689999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc-ccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA-NTN 693 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~-~~~ 693 (773)
++++|.+++.... ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++....... ...
T Consensus 102 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH-~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 102 EGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH-AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred CCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH-hCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 9999999997653 34899999999999999999999 9999999999999999999999999999997654322 222
Q ss_pred eeeccCccccccccccC---CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSK---LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||.+. ...++.++||||+|+++|||++|+.||....
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 229 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc
Confidence 23446899999999886 5678889999999999999999999997643
No 211
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-33 Score=297.39 Aligned_cols=209 Identities=24% Similarity=0.413 Sum_probs=163.8
Q ss_pred HHHHhhcccccccceEEEEEEeC----CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCC---
Q 041878 535 LLCATAEIMGKSTYGTAYKATLE----DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG--- 605 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 605 (773)
-.|.+.+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+.++++++||||+++++++.....
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 34567889999999999999754 34479999997543 3335678999999999999999999999965432
Q ss_pred -eEEEEEeecCCCCHHHHHhhcC---CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecC
Q 041878 606 -EKLLVFDFMPKGSLASFLHARG---PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFG 681 (773)
Q Consensus 606 -~~~lV~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG 681 (773)
..++||||+++|+|.+++.... ....+++..++.++.||+.||.||| +.||+||||||+||+++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS-NRNFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH-TTTCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCcceEEEcCCCcEEEeecC
Confidence 3599999999999999986432 2345899999999999999999999 9999999999999999999999999999
Q ss_pred Ccccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCC
Q 041878 682 LSRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNGMD 744 (773)
Q Consensus 682 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~~~ 744 (773)
++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 257 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH
Confidence 99876543322 2223457889999999998999999999999999999999 889997755443
No 212
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.8e-34 Score=302.44 Aligned_cols=199 Identities=24% Similarity=0.362 Sum_probs=160.3
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc--cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK--GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|.+.++||+|+||+||+|... +++.||||+++..... ....+.+|++++++++||||+++++++. ..+..++||||
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~ 114 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-HNHRLHLIFEY 114 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-ETTEEEEEEEC
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-cCCEEEEEEec
Confidence 456789999999999999854 7889999999754332 2456789999999999999999999995 45589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC-----CCCCeEEeecCCcccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD-----EKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~-----~~~~~kl~DfG~a~~~~~ 688 (773)
++ |+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+|||++ .++.+||+|||+++....
T Consensus 115 ~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 115 AE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCH-SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp CS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred CC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 97 59999998754 3789999999999999999999 89999999999999994 445599999999987643
Q ss_pred ccccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...+.
T Consensus 190 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 243 (329)
T 3gbz_A 190 PIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence 322 22334689999999998764 589999999999999999999999976543
No 213
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.4e-33 Score=297.99 Aligned_cols=196 Identities=26% Similarity=0.425 Sum_probs=166.6
Q ss_pred cccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccC-CCceEEeEEEEECCCCeEEEEEeecCC
Q 041878 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
+.||+|+||.||+|... +++.||+|+++... ......+.+|+.+++++. ||||+++++++. ..+..++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE-NTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCTT
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE-eCCeEEEEEEecCC
Confidence 78999999999999865 68999999997542 334678999999999995 699999999994 55589999999999
Q ss_pred CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC---CCCeEEeecCCccccccccccc
Q 041878 617 GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE---KTNPRIADFGLSRLMTAAANTN 693 (773)
Q Consensus 617 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~~~~ 693 (773)
|+|.+++.... ...+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++.......
T Consensus 114 ~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH-~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~-- 189 (327)
T 3lm5_A 114 GEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLH-QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-- 189 (327)
T ss_dssp EEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred CcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH-HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc--
Confidence 99999986542 345899999999999999999999 999999999999999998 78999999999987643322
Q ss_pred eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 694 VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 694 ~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.....||+.|+|||++....++.++||||+||++|||++|+.||...+
T Consensus 190 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp ----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 233468999999999999999999999999999999999999997644
No 214
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.9e-33 Score=310.20 Aligned_cols=197 Identities=23% Similarity=0.380 Sum_probs=161.0
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECC---CC--eEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP---KG--EKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---~~--~~~lV 610 (773)
|...++||+|+||.||+|.+. +|+.||||++..... ...+|++++++++|+||+++++++... .+ ..++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 456789999999999999975 689999999864322 234699999999999999999988532 12 36799
Q ss_pred EeecCCCCHHHHHhhc-CCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC-CCeEEeecCCcccccc
Q 041878 611 FDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK-TNPRIADFGLSRLMTA 688 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~-~~~kl~DfG~a~~~~~ 688 (773)
|||+++ ++.+.+... .....+++..+..++.||++||+||| +.||+||||||+|||++.+ +.+||+|||+++....
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 999975 676665432 22345899999999999999999999 9999999999999999965 5689999999987643
Q ss_pred ccccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+
T Consensus 210 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~ 261 (420)
T 1j1b_A 210 GEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261 (420)
T ss_dssp TCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 322 2234689999999988654 78999999999999999999999997754
No 215
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1e-33 Score=307.58 Aligned_cols=196 Identities=12% Similarity=0.107 Sum_probs=150.1
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc---ccHHHHHHHHHHHHcc--CCCceEEeE-------EEEECC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT---KGQKEFEAEAAAIGKI--HHPNLLALR-------AYYLGP 603 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~~~ 603 (773)
|...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.+ +|||+++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 346789999999999999865 789999999986543 2345677885555444 699988754 444222
Q ss_pred C----------------CeEEEEEeecCCCCHHHHHhhcCCCCccCHHHH------HHHHHHHHHHHHHhccCCCceecC
Q 041878 604 K----------------GEKLLVFDFMPKGSLASFLHARGPETIVNWATR------MSIAIGIARGLNYLHVEENMIHGN 661 (773)
Q Consensus 604 ~----------------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~al~yLH~~~~iiH~D 661 (773)
. ...++||||++ |+|.+++..... .+++..+ ..++.||+.||+||| +.||+|||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH-~~~ivHrD 219 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQ-SKGLVHGH 219 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTEEETT
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHH-HCCCccCc
Confidence 1 24799999998 899999987522 1344444 677899999999999 99999999
Q ss_pred CCCCCEEeCCCCCeEEeecCCccccccccccceeeccCccccccccccCC--CCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 662 LTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKL--KNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 662 ik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
|||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999998654221 13457799999999987 7799999999999999999999999987
Q ss_pred C
Q 041878 740 M 740 (773)
Q Consensus 740 ~ 740 (773)
.
T Consensus 296 ~ 296 (371)
T 3q60_A 296 V 296 (371)
T ss_dssp C
T ss_pred c
Confidence 5
No 216
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-33 Score=306.05 Aligned_cols=198 Identities=18% Similarity=0.326 Sum_probs=162.8
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCC-----------
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK----------- 604 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----------- 604 (773)
|.+.++||+|+||+||+|.. .+|+.||||++...... ..+|++++++++||||+++++++....
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 45678999999999999986 57899999998654322 246999999999999999999985422
Q ss_pred --------------------------CeEEEEEeecCCCCHHHHHhhc-CCCCccCHHHHHHHHHHHHHHHHHhccCCCc
Q 041878 605 --------------------------GEKLLVFDFMPKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEENM 657 (773)
Q Consensus 605 --------------------------~~~~lV~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~yLH~~~~i 657 (773)
...++||||++ |+|.+.+... .....+++..+..++.||++||+||| +.||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~gi 162 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGI 162 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-TTTE
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCcC
Confidence 23789999997 5888777642 12345899999999999999999999 9999
Q ss_pred eecCCCCCCEEeC-CCCCeEEeecCCccccccccccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCC
Q 041878 658 IHGNLTSSNVLLD-EKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKS 735 (773)
Q Consensus 658 iH~Dik~~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~ 735 (773)
+||||||+||+++ .++.+||+|||+++....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 9999999999998 678899999999987644332 2334689999999987764 58999999999999999999999
Q ss_pred CCCCCCC
Q 041878 736 PGEPMNG 742 (773)
Q Consensus 736 P~~~~~~ 742 (773)
||.+.+.
T Consensus 241 pf~~~~~ 247 (383)
T 3eb0_A 241 LFSGETS 247 (383)
T ss_dssp SSCCSSH
T ss_pred CCCCCCh
Confidence 9977553
No 217
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=293.13 Aligned_cols=198 Identities=27% Similarity=0.436 Sum_probs=168.0
Q ss_pred hcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecCCCC
Q 041878 540 AEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMPKGS 618 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~~g~ 618 (773)
..+||+|+||.||+|.. .+++.||||.+........+.+.+|+.++++++||||+++++++. ..+..++||||+++++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-ENGFIKIFMEQVPGGS 105 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCSEEE
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE-eCCcEEEEEEeCCCCC
Confidence 35899999999999986 468899999998776666788999999999999999999999995 4558999999999999
Q ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC-CCCeEEeecCCccccccccccceeec
Q 041878 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE-KTNPRIADFGLSRLMTAAANTNVIAT 697 (773)
Q Consensus 619 L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~ 697 (773)
|.+++........+++..+..++.||+.||+||| +.||+||||||+||+++. ++.+||+|||.+........ .....
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 183 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH-DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETF 183 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH-hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-ccccc
Confidence 9999987654445678889999999999999999 899999999999999987 88999999999986643221 12234
Q ss_pred cCccccccccccCCC--CCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 698 AGTLGYRAPELSKLK--NANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 698 ~gt~~y~aPE~~~~~--~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
.||+.|+|||++... .++.++||||||+++|||++|+.||...
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 689999999988654 3789999999999999999999999653
No 218
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.2e-33 Score=298.22 Aligned_cols=197 Identities=25% Similarity=0.410 Sum_probs=170.0
Q ss_pred HhhcccccccceEEEEEEeC-----CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECC-CCeEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLE-----DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-KGEKLLV 610 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~lV 610 (773)
.+.+.||+|+||+||++.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++... ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 56789999999999998653 578899999976533 3456789999999999999999999999654 3578999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++|+|.+++.+.. +++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 114 ~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH-~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLH-AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp ECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHH-hCCccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 99999999999998653 789999999999999999999 9999999999999999999999999999998765433
Q ss_pred cc--ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 691 NT--NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 691 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
.. ......+|+.|+|||.+.+..++.++||||+|+++|||+||+.||..
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 21 12234578889999999888899999999999999999999999864
No 219
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.9e-33 Score=309.02 Aligned_cols=211 Identities=18% Similarity=0.268 Sum_probs=174.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.++||+|+||.||+|.. .+++.||||++..... ..++..|+++++.++|++.+..+.++....+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 34568999999999999986 5789999998865433 3457889999999998655555555545666889999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe---CCCCCeEEeecCCcccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL---DEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll---~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+++|.+++.... ..+++..++.++.||+.||+||| +.+||||||||+|||+ +.++.+||+|||+++........
T Consensus 86 g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 86 GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH-HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 999999998643 34899999999999999999999 9999999999999999 68899999999999876544321
Q ss_pred ------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHHHHHH
Q 041878 693 ------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWVASIV 753 (773)
Q Consensus 693 ------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~ 753 (773)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+..+.+.++.
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 229 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh
Confidence 1124569999999999999999999999999999999999999999877666555554443
No 220
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-33 Score=304.30 Aligned_cols=196 Identities=21% Similarity=0.304 Sum_probs=159.6
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCC-----CeEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-----GEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~~ 608 (773)
|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.... ...+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 456789999999999999864 68899999997532 234567889999999999999999999995443 2689
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||++ |+|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 107 lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 107 IVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHH-HCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 9999996 578888863 2788999999999999999999 99999999999999999999999999999986543
Q ss_pred ccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+
T Consensus 180 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 180 SF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 2233468999999999998999999999999999999999999997654
No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=296.43 Aligned_cols=202 Identities=26% Similarity=0.426 Sum_probs=169.4
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEEC---CCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG---PKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|.. .+++.||||++........+.+.+|++++++++||||+++++++.. .....++|||
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 45678999999999999986 5789999999977666667789999999999999999999999863 2347889999
Q ss_pred ecCCCCHHHHHhhcC-CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 613 FMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
|+++|+|.+++.... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||.+........
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH-AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 999999999998642 2345899999999999999999999 89999999999999999999999999999876532211
Q ss_pred c--------ceeeccCccccccccccCCCC---CCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 692 T--------NVIATAGTLGYRAPELSKLKN---ANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 692 ~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
. ......||+.|+|||.+.... +++++||||||+++|||++|+.||..
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 1 112234799999999887544 68899999999999999999999854
No 222
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.3e-33 Score=302.73 Aligned_cols=199 Identities=27% Similarity=0.385 Sum_probs=161.7
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccCcc-----------cHHHHHHHHHHHHccCCCceEEeEEEEECCC--
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTK-----------GQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-- 604 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 604 (773)
.+.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+++++++....
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (362)
T 3pg1_A 25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104 (362)
T ss_dssp EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTT
T ss_pred EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCC
Confidence 456899999999999999888999999999653221 1378899999999999999999999985422
Q ss_pred --CeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCC
Q 041878 605 --GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGL 682 (773)
Q Consensus 605 --~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~ 682 (773)
...++||||++ |+|.+++... ...+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||+
T Consensus 105 ~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 180 (362)
T 3pg1_A 105 AMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILLADNNDITICDFNL 180 (362)
T ss_dssp TCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred CcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH-HCcCEecCCChHHEEEcCCCCEEEEecCc
Confidence 36799999997 6898888754 335899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 683 SRLMTAAANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 683 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
++....... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 181 ~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 181 AREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp -----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 975443322 233468999999998876 6789999999999999999999999976553
No 223
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.2e-34 Score=295.62 Aligned_cols=203 Identities=23% Similarity=0.380 Sum_probs=169.9
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEEC-CCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLG-PKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.. .....++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 345688999999999999875 78999999997543 3345678999999999999999999998754 3457899999
Q ss_pred ecCCCCHHHHHhhcC-CCCccCHHHHHHHHHHHHHHHHHhccCCC-----ceecCCCCCCEEeCCCCCeEEeecCCcccc
Q 041878 613 FMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEEN-----MIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~yLH~~~~-----iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 686 (773)
|+++++|.+++.... ....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||.+...
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH-RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh-cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999999997643 2344899999999999999999999 777 999999999999999999999999998766
Q ss_pred ccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 687 TAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 687 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+
T Consensus 167 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 167 NHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp ---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 433211 123358999999999988899999999999999999999999997654
No 224
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=303.25 Aligned_cols=198 Identities=21% Similarity=0.297 Sum_probs=162.2
Q ss_pred HHhhcccccccceEEEEEEeC----CCCEEEEEEecccCcc-----------cHHHHHHHHHHHHccCCCceEEeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE----DGSEVAVKRLREKTTK-----------GQKEFEAEAAAIGKIHHPNLLALRAYYL 601 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~~~ 601 (773)
|.+.+.||+|+||.||+|... ++..||||+....... ....+.+|+..++.++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 456789999999999999875 5788999998754322 1234667888999999999999999986
Q ss_pred CC---CCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC--CeE
Q 041878 602 GP---KGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT--NPR 676 (773)
Q Consensus 602 ~~---~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~--~~k 676 (773)
.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++ .+|
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIH-ENEYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEESSSTTSEE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-hCCeeCCCcCHHHEEEccCCCCcEE
Confidence 52 45789999999 999999998754 4899999999999999999999 89999999999999999887 999
Q ss_pred EeecCCcccccccccc------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 677 IADFGLSRLMTAAANT------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 677 l~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
|+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999999876543221 11334689999999999988999999999999999999999999965
No 225
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-33 Score=301.32 Aligned_cols=200 Identities=26% Similarity=0.395 Sum_probs=165.5
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc-----cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK-----GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
+|.+.+.||+|+||.||+|... +|+.||||++...... ....+.+|++++++++||||+++++++ ...+..++
T Consensus 11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~l 89 (346)
T 1ua2_A 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF-GHKSNISL 89 (346)
T ss_dssp --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE-CCTTCCEE
T ss_pred ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE-eeCCceEE
Confidence 3567789999999999999875 6899999999753221 124678999999999999999999999 55668999
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++ +|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLH-QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHH-HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999975 8998887643 34778889999999999999999 999999999999999999999999999999876433
Q ss_pred cccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. ......+|+.|+|||++.+ ..++.++||||+||++|||++|..||.+.+
T Consensus 166 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~ 217 (346)
T 1ua2_A 166 NR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS 217 (346)
T ss_dssp CC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence 22 2234568999999998865 458999999999999999999999987654
No 226
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-33 Score=305.55 Aligned_cols=196 Identities=27% Similarity=0.391 Sum_probs=151.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECC-----CCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-----KGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~~ 608 (773)
|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... ....+
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 45678999999999999985 468899999996532 23456788999999999999999999998543 14679
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+|+||+ +++|.++++.. .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 111 lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred EEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH-HCCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 999999 78999988752 3889999999999999999999 99999999999999999999999999999986543
Q ss_pred ccccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
. .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.
T Consensus 185 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 235 (367)
T 2fst_X 185 E----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235 (367)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred c----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 2 223468999999998876 6789999999999999999999999976553
No 227
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-33 Score=296.56 Aligned_cols=199 Identities=27% Similarity=0.434 Sum_probs=166.5
Q ss_pred Hhhc-ccccccceEEEEEEe---CCCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEE
Q 041878 538 ATAE-IMGKSTYGTAYKATL---EDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 538 ~~~~-~lG~G~fg~Vy~~~~---~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
.+.+ .||+|+||.||+|.+ .+++.||||+++.... ...+++.+|++++++++||||+++++++ . .+..++||
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~-~~~~~lv~ 96 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E-AESWMLVM 96 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E-SSSEEEEE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C-CCCcEEEE
Confidence 4445 899999999999964 2467899999975432 2356799999999999999999999998 3 34789999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 97 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 97 EMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLE-ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp ECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred EeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHH-hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 9999999999998753 3789999999999999999999 99999999999999999999999999999987654432
Q ss_pred cc--eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 041878 692 TN--VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMNG 742 (773)
Q Consensus 692 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~~ 742 (773)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...+.
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 226 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 21 122346789999999988889999999999999999999 9999976543
No 228
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-32 Score=300.74 Aligned_cols=324 Identities=17% Similarity=0.151 Sum_probs=253.5
Q ss_pred cCCCCCCCCCCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcc
Q 041878 68 LRSWNDSGVGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLF 147 (773)
Q Consensus 68 l~sW~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 147 (773)
+++|.. +.+ |++.|.+..|....+. +............-..++++++|++++|.++...+..+..+++|++|+|+
T Consensus 3 ~~~~~~-~~~-C~~~~~~~~c~~~~~~---i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQP-EYK-CIDSNLQYDCVFYDVH---IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CC-EEC-BCC------EEEESCE---ECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCC-ccc-eehhhhhhccceeeee---eecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 577854 334 4445777777422222 22222222222223457899999999999996555557899999999999
Q ss_pred cCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeecccccccccc
Q 041878 148 NNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSV 227 (773)
Q Consensus 148 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 227 (773)
+|++++..+..|+.+++|++|+|++|.+++..|..+.++++|++|+|++|+++...+..+.++++|++|++++|++++..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 99999888889999999999999999999888888999999999999999999666666799999999999999999877
Q ss_pred CCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCccc
Q 041878 228 PNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVT 307 (773)
Q Consensus 228 p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~ 307 (773)
+..+..+. +|++|++++|.+++. .+..+++|+.|++++|.+++. ...++|++|++++|.++.. |..
T Consensus 158 ~~~~~~l~-----~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~ 223 (390)
T 3o6n_A 158 DDTFQATT-----SLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP 223 (390)
T ss_dssp TTTTSSCT-----TCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC
T ss_pred hhhccCCC-----CCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc
Confidence 77776554 899999999999975 366788999999999999852 3446899999999999855 332
Q ss_pred ccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccC
Q 041878 308 FTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLT 387 (773)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 387 (773)
..++|+.|++++|++++. ..+..+++|++|++++|.+++..|..+..+++|++|+|++|++++ +|..+..+++|+
T Consensus 224 --~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~ 298 (390)
T 3o6n_A 224 --VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLK 298 (390)
T ss_dssp --CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCC
T ss_pred --ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCC
Confidence 247999999999999875 578999999999999999999999999999999999999999995 566778899999
Q ss_pred EEEeecccCCCCCchhhh--ccCCCCCCCCC
Q 041878 388 SFNVSYNNLSGSVPPLLS--KKFNSSSFVGN 416 (773)
Q Consensus 388 ~L~ls~N~l~g~~p~~~~--~~~~~~~~~~n 416 (773)
.|+|++|++++ +|..+. ..+....+.+|
T Consensus 299 ~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N 328 (390)
T 3o6n_A 299 VLDLSHNHLLH-VERNQPQFDRLENLYLDHN 328 (390)
T ss_dssp EEECCSSCCCC-CGGGHHHHTTCSEEECCSS
T ss_pred EEECCCCccee-cCccccccCcCCEEECCCC
Confidence 99999999984 555432 23333344454
No 229
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-34 Score=305.95 Aligned_cols=197 Identities=19% Similarity=0.281 Sum_probs=167.9
Q ss_pred HHhhcccccccceEEEEEEeCC---------CCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEE------------
Q 041878 537 CATAEIMGKSTYGTAYKATLED---------GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLA------------ 595 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~------------ 595 (773)
|.+.+.||+|+||.||+|.... ++.||||.+... ..+.+|++++++++||||++
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 4567899999999999998753 789999998643 46788999999999999887
Q ss_pred ---eEEEEECCCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC
Q 041878 596 ---LRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672 (773)
Q Consensus 596 ---l~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~ 672 (773)
+++++....+..++||||+ +++|.+++.... ...+++..+..++.||+.||+||| +.||+||||||+||+++.+
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLH-ENEYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH-HTTCBCSCCCGGGEEEETT
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCCHHHEEEcCC
Confidence 6777765567899999999 999999998752 234899999999999999999999 8999999999999999999
Q ss_pred C--CeEEeecCCcccccccccc------ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 673 T--NPRIADFGLSRLMTAAANT------NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 673 ~--~~kl~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 8 8999999999876543321 1123468999999999999899999999999999999999999998754
No 230
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-32 Score=292.93 Aligned_cols=196 Identities=25% Similarity=0.387 Sum_probs=161.0
Q ss_pred HHHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHcc--CCCceEEeEEEEECCC---CeEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI--HHPNLLALRAYYLGPK---GEKLLV 610 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~---~~~~lV 610 (773)
.|.+.+.||+|+||.||+|... ++.||||++... ....+..|.+++... +||||+++++++.... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 4567899999999999999876 899999998543 234445566665554 8999999999986543 578999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC--------CceecCCCCCCEEeCCCCCeEEeecCC
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE--------NMIHGNLTSSNVLLDEKTNPRIADFGL 682 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~--------~iiH~Dik~~NIll~~~~~~kl~DfG~ 682 (773)
|||+++|+|.++++.. .+++..++.++.|++.||+||| +. ||+||||||+||+++.++.+||+|||+
T Consensus 114 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH-~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 114 TDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLH-TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH-SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH-HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 9999999999999764 3889999999999999999999 77 999999999999999999999999999
Q ss_pred ccccccccccc---eeeccCccccccccccCCCCCCcc------hhhHHHHHHHHHHHcC----------CCCCCCC
Q 041878 683 SRLMTAAANTN---VIATAGTLGYRAPELSKLKNANTK------TDVYSLGVIILELLTG----------KSPGEPM 740 (773)
Q Consensus 683 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dvws~Gv~l~el~tg----------~~P~~~~ 740 (773)
+.......... .....||+.|+|||++.+..++.+ +|||||||++|||+|| +.||...
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 97664433221 123469999999999887766655 9999999999999999 7777653
No 231
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-32 Score=293.70 Aligned_cols=192 Identities=19% Similarity=0.343 Sum_probs=166.9
Q ss_pred HHHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEECC-CCeEEEEEe
Q 041878 536 LCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGP-KGEKLLVFD 612 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~-~~~~~lV~e 612 (773)
.|.+.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++... ....++|||
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred ceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 356678999999999999985 57899999999643 3577899999999997 99999999999654 447899999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCC-CeEEeecCCccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKT-NPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~-~~kl~DfG~a~~~~~~~~ 691 (773)
|+++++|.++++. ++...+..++.||+.||+||| +.||+||||||+|||++.++ .+||+|||+++.......
T Consensus 114 ~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 114 HVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp CCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred ccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHH-hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999998864 688899999999999999999 99999999999999999777 799999999986654332
Q ss_pred cceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
.....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||..
T Consensus 187 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 187 --YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp --CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred --cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 233468999999998876 6789999999999999999999999954
No 232
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-33 Score=296.04 Aligned_cols=200 Identities=24% Similarity=0.414 Sum_probs=167.7
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||.||+|... +++.||+|++........+++.+|++++++++||||+++++++.. .+..++||||++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 99 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIEFCP 99 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEECCT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEEeCC
Confidence 456788999999999999875 589999999987766677889999999999999999999999954 458999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
+++|.+++.... ..+++..+..++.||+.||.||| +.|++||||||+||+++.++.+||+|||++........ ...
T Consensus 100 ~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 175 (302)
T 2j7t_A 100 GGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLH-SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ-KRD 175 (302)
T ss_dssp TEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-C--
T ss_pred CCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh-cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-ccc
Confidence 999999987643 34889999999999999999999 89999999999999999999999999998764332211 122
Q ss_pred eccCcccccccccc-----CCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELS-----KLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 696 ~~~gt~~y~aPE~~-----~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...||+.|+|||.+ ....++.++||||||+++|||++|+.||...+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 34589999999987 46778999999999999999999999997654
No 233
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.9e-32 Score=291.08 Aligned_cols=285 Identities=26% Similarity=0.416 Sum_probs=242.9
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
..++.|+++++.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|+++. +| .+..+++|++|+|
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l 117 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYL 117 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEEC
Confidence 467889999988874 33 48889999999999999986443 8999999999999999985 33 6899999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +.. +++|++|++++|
T Consensus 118 ~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~-----l~~L~~L~l~~n 187 (347)
T 4fmz_A 118 NEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IAN-----LTDLYSLSLNYN 187 (347)
T ss_dssp TTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGG-----CTTCSEEECTTS
T ss_pred cCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hcc-----CCCCCEEEccCC
Confidence 99999854 44 8899999999999997664444 48899999999999999885543 333 348999999999
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcch
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPE 330 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 330 (773)
.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++. .
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 259 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--N 259 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--G
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--h
Confidence 9986654 8889999999999999986544 8889999999999999986554 88899999999999999774 5
Q ss_pred hhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 331 GLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 331 ~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
.+..+++|++|++++|++++. +.+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 688899999999999999864 458899999999999999999889999999999999999999998766
No 234
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=306.64 Aligned_cols=199 Identities=26% Similarity=0.426 Sum_probs=153.9
Q ss_pred hcccccccceEEEEEEeC---CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEEC-CCCeEEEEEeecC
Q 041878 540 AEIMGKSTYGTAYKATLE---DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG-PKGEKLLVFDFMP 615 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~~lV~e~~~ 615 (773)
+++||+|+||+||+|... +++.||||++.... ....+.+|+.++++++||||+++++++.. .....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999865 57889999996543 34578899999999999999999999864 3557899999996
Q ss_pred CCCHHHHHhhcC------CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe----CCCCCeEEeecCCccc
Q 041878 616 KGSLASFLHARG------PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL----DEKTNPRIADFGLSRL 685 (773)
Q Consensus 616 ~g~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll----~~~~~~kl~DfG~a~~ 685 (773)
|+|.+++.... ....+++..++.++.||+.||+||| +.||+||||||+|||+ +.++.+||+|||+++.
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH-~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH-hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 58888876431 1224889999999999999999999 9999999999999999 6778999999999987
Q ss_pred cccccc--cceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 686 MTAAAN--TNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 686 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 241 (405)
T 3rgf_A 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241 (405)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred cCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence 654322 22234568999999998876 4589999999999999999999999976543
No 235
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.2e-33 Score=318.05 Aligned_cols=178 Identities=19% Similarity=0.178 Sum_probs=150.2
Q ss_pred CCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCC
Q 041878 82 GWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGN 161 (773)
Q Consensus 82 ~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 161 (773)
.|.|+ |+ +++++++ .+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|++
T Consensus 5 ~~~~~-c~--------~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 72 (549)
T 2z81_A 5 DASGV-CD--------GRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS 72 (549)
T ss_dssp CTTSE-EE--------CTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCce-EE--------CCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc
Confidence 39888 83 4556666 5666554 79999999999999999999999999999999999999988899999
Q ss_pred CCCCCEEEccCCCCCCCCccccccccccceeecccccccc-cCCccccCCCccceeeccccccccccC-CcccccccCcc
Q 041878 162 CPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLG-SIPLSLTRLPSLSVLALQHNNLSGSVP-NNWGVLAGNKS 239 (773)
Q Consensus 162 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~~~~ 239 (773)
+++|++|+|++|.+++..|..++++++|++|+|++|++++ ..|..+.++++|++|++++|++.+.+| ..+..+.
T Consensus 73 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~---- 148 (549)
T 2z81_A 73 LGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT---- 148 (549)
T ss_dssp CTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC----
T ss_pred cccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc----
Confidence 9999999999999998877789999999999999999987 467889999999999999999555555 4565544
Q ss_pred cccceeeccccccccccCccCCCCCCccEEECCCCcc
Q 041878 240 YQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKI 276 (773)
Q Consensus 240 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 276 (773)
+|++|++++|.+++..|..++.+++|++|++++|.+
T Consensus 149 -~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 149 -SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp -EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred -ccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 899999999999998888887655555444444443
No 236
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.6e-33 Score=308.62 Aligned_cols=198 Identities=22% Similarity=0.302 Sum_probs=168.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHcc------CCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKI------HHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~~~l 609 (773)
|.+.++||+|+||.||+|... +++.||||+++.. .....++.+|+++++.+ +|+||+++++++. ..+..++
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~-~~~~~~l 176 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT-FRNHICM 176 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-ETTEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-cCCeEEE
Confidence 456789999999999999865 5889999999753 23356778888888887 4679999999994 4558999
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC--eEEeecCCccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN--PRIADFGLSRLMT 687 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~--~kl~DfG~a~~~~ 687 (773)
||||++ ++|.+++.... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +||+|||++....
T Consensus 177 v~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH-HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 999995 69999998754 234899999999999999999999 899999999999999999987 9999999997543
Q ss_pred cccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC
Q 041878 688 AAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743 (773)
Q Consensus 688 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~ 743 (773)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||...+..
T Consensus 254 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 254 QR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp CC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred Cc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 32 22346899999999999999999999999999999999999999776543
No 237
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.2e-33 Score=292.43 Aligned_cols=201 Identities=21% Similarity=0.381 Sum_probs=160.4
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|.. .+|+.||||++.... .....++.+|+.++++++||||+++++++.. .+..++|||
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 112 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVLE 112 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEEEe
Confidence 45678999999999999986 578999999997532 3345678899999999999999999999954 558999999
Q ss_pred ecCCCCHHHHHhhcC-CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 613 FMPKGSLASFLHARG-PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
|+++++|.+++.... ....++...+..++.||+.||.||| +.|++||||||+||+++.++.+||+|||++........
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH-SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh-hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 999999999997532 2345789999999999999999999 99999999999999999999999999999876543322
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
......+++.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 192 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 192 -AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred -cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 122345899999999999899999999999999999999999999754
No 238
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8e-33 Score=291.10 Aligned_cols=198 Identities=27% Similarity=0.411 Sum_probs=169.4
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC---------cccHHHHHHHHHHHHccC-CCceEEeEEEEECCCC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT---------TKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKG 605 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 605 (773)
|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++. ||||+++++++. ..+
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~ 97 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-TNT 97 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSS
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec-cCC
Confidence 345688999999999999875 68899999996543 122456789999999996 999999999994 456
Q ss_pred eEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 606 EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 606 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
..++||||+++++|.+++.... .+++..+..++.||+.||.||| +.|++||||||+||+++.++.+||+|||.+..
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 8999999999999999998753 3789999999999999999999 99999999999999999999999999999987
Q ss_pred cccccccceeeccCccccccccccC------CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSK------LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...... .....+|+.|+|||++. ...++.++||||+|+++|||++|+.||...+
T Consensus 174 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 174 LDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 654322 23346899999999874 4578899999999999999999999997643
No 239
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-33 Score=300.83 Aligned_cols=203 Identities=23% Similarity=0.371 Sum_probs=171.5
Q ss_pred HHhhcccccccceEEEEEEeCC-C-----CEEEEEEecccCc-ccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATLED-G-----SEVAVKRLREKTT-KGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~-g-----~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 608 (773)
|.+.+.||+|+||.||+|.... + ..||+|.+..... ...+.+.+|+.+++++ +||||+++++++ ...+..+
T Consensus 48 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-~~~~~~~ 126 (333)
T 2i1m_A 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC-THGGPVL 126 (333)
T ss_dssp EEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSCE
T ss_pred ceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-ecCCceE
Confidence 4567899999999999998642 2 4799999976533 3456789999999999 899999999999 5556899
Q ss_pred EEEeecCCCCHHHHHhhcCC-----------CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEE
Q 041878 609 LVFDFMPKGSLASFLHARGP-----------ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRI 677 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl 677 (773)
+||||+++|+|.+++..... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA-SKNCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGCEEEGGGEEEB
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh-cCCcccCCcccceEEECCCCeEEE
Confidence 99999999999999976421 234789999999999999999999 899999999999999999999999
Q ss_pred eecCCccccccccccc-eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 678 ADFGLSRLMTAAANTN-VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 678 ~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
+|||++.......... .....+|+.|+|||.+.+..++.++|||||||++|||+| |..||....
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999998665433222 223346789999999988899999999999999999999 999997654
No 240
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.5e-33 Score=299.10 Aligned_cols=203 Identities=26% Similarity=0.388 Sum_probs=166.9
Q ss_pred HHhhcccccccceEEEEEEe------CCCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL------EDGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
|.+.+.||+|+||.||+|.+ .++..||||.+.... .....++.+|+.++++++||||+++++++ ...+..++
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~l 110 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-LQSLPRFI 110 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSSCEE
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-cCCCCcEE
Confidence 45678999999999999984 256789999997543 34456789999999999999999999999 45558899
Q ss_pred EEeecCCCCHHHHHhhcCC----CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC---CCeEEeecCC
Q 041878 610 VFDFMPKGSLASFLHARGP----ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGL 682 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~ 682 (773)
||||+++++|.+++..... ...+++..++.++.||+.||.||| +.||+||||||+||+++.+ ..+||+|||+
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH-~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh-hCCeecCcCCHhHEEEecCCCcceEEECcccc
Confidence 9999999999999987642 244889999999999999999999 9999999999999999944 4599999999
Q ss_pred cccccccccc-ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 683 SRLMTAAANT-NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 683 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
+......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 250 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence 8765433221 2223457889999999988899999999999999999998 999997644
No 241
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.1e-33 Score=290.29 Aligned_cols=197 Identities=18% Similarity=0.305 Sum_probs=166.1
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEeccc--CcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREK--TTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
.|.+.+.||+|+||+||+|... +++.||+|+++.. ......++.+|+..+.++ +||||+++++++. ..+..++||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~-~~~~~~lv~ 90 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA-EDDHMLIQN 90 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-ETTEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-cCCeEEEEE
Confidence 3556789999999999999875 7899999999754 233456788999999999 8999999999994 455899999
Q ss_pred eecCCCCHHHHHhhcCC-CCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC------------------
Q 041878 612 DFMPKGSLASFLHARGP-ETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK------------------ 672 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~------------------ 672 (773)
||+++++|.+++..... ...+++..+..++.||+.||+||| +.||+||||||+||+++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEC--------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH-hCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 99999999999986521 234789999999999999999999 9999999999999999844
Q ss_pred -CCeEEeecCCccccccccccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 673 -TNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 673 -~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
..+||+|||.+....... ...||+.|+|||.+.+. .+++++|||||||++|||++|..|+..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 233 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN 233 (289)
T ss_dssp CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred ceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 479999999988765432 23489999999998765 567899999999999999999987643
No 242
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=7.2e-33 Score=294.90 Aligned_cols=199 Identities=25% Similarity=0.383 Sum_probs=165.1
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc--------ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCe
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT--------KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGE 606 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 606 (773)
.|.+.+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++.. . .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~-~ 88 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E-D 88 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES-S-S
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC-C-c
Confidence 3566789999999999999865 578999999864321 123458899999999999999999999853 3 4
Q ss_pred EEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC---eEEeecCCc
Q 041878 607 KLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN---PRIADFGLS 683 (773)
Q Consensus 607 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a 683 (773)
.++||||+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++. +||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 899999999999999987643 4789999999999999999999 999999999999999987665 999999999
Q ss_pred cccccccccceeeccCcccccccccc---CCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 684 RLMTAAANTNVIATAGTLGYRAPELS---KLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 684 ~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
+....... .....||+.|+|||++ ....++.++|||||||++|||++|+.||.....
T Consensus 165 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (322)
T 2ycf_A 165 KILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224 (322)
T ss_dssp EECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred eecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence 87643321 1234589999999986 356789999999999999999999999986543
No 243
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.6e-33 Score=291.45 Aligned_cols=195 Identities=25% Similarity=0.471 Sum_probs=168.2
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEEC------------
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG------------ 602 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------------ 602 (773)
.|...+.||+|+||.||+|... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 3456789999999999999875 78999999997543 356789999999999999999998743
Q ss_pred ---CCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEee
Q 041878 603 ---PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIAD 679 (773)
Q Consensus 603 ---~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~D 679 (773)
.....++||||+++++|.+++.... ...+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIH-SKKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCHHHEEEcCCCCEEECc
Confidence 1235789999999999999997653 234889999999999999999999 89999999999999999999999999
Q ss_pred cCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCC
Q 041878 680 FGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGE 738 (773)
Q Consensus 680 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~ 738 (773)
||++........ .....+|+.|+|||.+.+..++.++||||||+++|||++|..|+.
T Consensus 166 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 166 FGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp CTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred chhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999987654322 223458999999999998899999999999999999999998864
No 244
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-32 Score=315.67 Aligned_cols=296 Identities=18% Similarity=0.166 Sum_probs=249.5
Q ss_pred cCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccce
Q 041878 112 SQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYR 191 (773)
Q Consensus 112 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 191 (773)
..+++++.|++++|.++...+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 35789999999999999776667899999999999999999888889999999999999999999888888999999999
Q ss_pred eecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEEC
Q 041878 192 LNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISL 271 (773)
Q Consensus 192 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 271 (773)
|+|++|.+++..+..|.++++|++|+|++|.+++..|..++.+. +|++|+|++|.+++.... .+++|+.|++
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~---~l~~L~~L~l 199 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT-----SLQNLQLSSNRLTHVDLS---LIPSLFHANV 199 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT-----TCCEEECTTSCCSBCCGG---GCTTCSEEEC
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCC-----cCcEEECcCCCCCCcChh---hhhhhhhhhc
Confidence 99999999977777789999999999999999988887777655 899999999999976433 3445555555
Q ss_pred CCCcccCC------------------CCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhc
Q 041878 272 SHNKIVGP------------------IPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLE 333 (773)
Q Consensus 272 ~~N~l~~~------------------~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 333 (773)
++|.+++. ++..+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..+.
T Consensus 200 ~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 200 SYNLLSTLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp CSSCCSEEECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred ccCccccccCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 55544431 11111 2578999999999986 46788999999999999999999999999
Q ss_pred cccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhhhccCCCCCC
Q 041878 334 RLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLSKKFNSSSF 413 (773)
Q Consensus 334 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~ 413 (773)
.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++..+..+ ..+....+
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~L~~L~l 352 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTH-HTLKNLTL 352 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTT-CCCSEEEC
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhc-CCCCEEEe
Confidence 99999999999999996 5777888999999999999999 688889999999999999999987543333 44555567
Q ss_pred CCCCCCCCC
Q 041878 414 VGNLQLCGY 422 (773)
Q Consensus 414 ~~n~~~c~~ 422 (773)
.+|+..|.+
T Consensus 353 ~~N~~~~~~ 361 (597)
T 3oja_B 353 SHNDWDCNS 361 (597)
T ss_dssp CSSCEEHHH
T ss_pred eCCCCCChh
Confidence 788777654
No 245
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-33 Score=299.20 Aligned_cols=201 Identities=28% Similarity=0.511 Sum_probs=166.4
Q ss_pred HHhhcccccccceEEEEEEeC-CCCE--EEEEEecccC-cccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSE--VAVKRLREKT-TKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~ 611 (773)
|.+.+.||+|+||.||+|... ++.. ||+|.++... ....+.+.+|+++++++ +||||+++++++. ..+..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~ 105 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAI 105 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-ETTEEEEEE
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee-eCCceEEEE
Confidence 456789999999999999864 5554 4999987542 33456789999999999 8999999999994 455899999
Q ss_pred eecCCCCHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEe
Q 041878 612 DFMPKGSLASFLHARG-------------PETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIA 678 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~ 678 (773)
||+++|+|.+++.... ....+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECGGGCEEEC
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH-hCCccCCCCccceEEEcCCCeEEEc
Confidence 9999999999998653 1235899999999999999999999 9999999999999999999999999
Q ss_pred ecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 679 DFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 679 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
|||+++...... ......+++.|+|||.+....++.++||||+||++|||+| |+.||...+
T Consensus 185 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 246 (327)
T 1fvr_A 185 DFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246 (327)
T ss_dssp CTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc
Confidence 999987543222 1223347889999999988889999999999999999998 999997644
No 246
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.2e-33 Score=300.16 Aligned_cols=199 Identities=19% Similarity=0.343 Sum_probs=170.6
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCccc-----------------HHHHHHHHHHHHccCCCceEEeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKG-----------------QKEFEAEAAAIGKIHHPNLLALRAY 599 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l~~~ 599 (773)
|.+.+.||+|+||.||+|.. +|+.||||.+....... .+.+.+|++++++++||||++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 111 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEE
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 45678999999999999998 89999999996432211 1789999999999999999999999
Q ss_pred EECCCCeEEEEEeecCCCCHHHH------HhhcCCCCccCHHHHHHHHHHHHHHHHHhccC-CCceecCCCCCCEEeCCC
Q 041878 600 YLGPKGEKLLVFDFMPKGSLASF------LHARGPETIVNWATRMSIAIGIARGLNYLHVE-ENMIHGNLTSSNVLLDEK 672 (773)
Q Consensus 600 ~~~~~~~~~lV~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~-~~iiH~Dik~~NIll~~~ 672 (773)
+.. .+..++||||+++|+|.++ +.... ...+++..+..++.||+.||.||| + .||+||||||+||+++.+
T Consensus 112 ~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH-~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 112 ITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIH-NEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp EES-SSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHH-HTSCEECCCCCGGGEEECTT
T ss_pred Eee-CCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHh-ccCCEeecCCChHhEEEcCC
Confidence 954 4589999999999999998 54421 345899999999999999999999 7 999999999999999999
Q ss_pred CCeEEeecCCccccccccccceeeccCccccccccccCCC-CCCc-chhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 673 TNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLK-NANT-KTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 673 ~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
+.+||+|||.+...... ......||+.|+|||.+.+. .++. ++||||+|+++|||++|+.||.....
T Consensus 189 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp SCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred CcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 99999999999875433 23345689999999998877 6666 99999999999999999999986543
No 247
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.4e-33 Score=291.48 Aligned_cols=200 Identities=29% Similarity=0.432 Sum_probs=167.1
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
.+.+.||+|+||.||+|... +|+.||||+++.... .....+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~ 84 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECC
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-cCCceEEEEEcc
Confidence 45688999999999999875 789999999865432 23467889999999999999999999995 455899999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccce
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNV 694 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 694 (773)
+ ++|.+++.... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||.+......... .
T Consensus 85 ~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-~ 160 (299)
T 2r3i_A 85 H-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT-Y 160 (299)
T ss_dssp S-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC-T
T ss_pred c-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHH-HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc-c
Confidence 7 69999998754 234788999999999999999999 899999999999999999999999999998765433211 1
Q ss_pred eeccCccccccccccCCCC-CCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 695 IATAGTLGYRAPELSKLKN-ANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 695 ~~~~gt~~y~aPE~~~~~~-~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
....+|+.|+|||.+.+.. ++.++|||||||++|||+||+.||...+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 209 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209 (299)
T ss_dssp TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH
Confidence 2345799999999887655 79999999999999999999999976553
No 248
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=299.68 Aligned_cols=193 Identities=32% Similarity=0.516 Sum_probs=156.3
Q ss_pred HhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHH--HHHccCCCceEEeEEEEEC----CCCeEEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAA--AIGKIHHPNLLALRAYYLG----PKGEKLLVF 611 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~--~l~~l~h~niv~l~~~~~~----~~~~~~lV~ 611 (773)
.+.+.||+|+||.||+|+. +++.||||++.... ...+..|.+ .+..++|+||+++++.+.. .....++||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred heeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 4568999999999999987 58999999996432 333444444 4556899999999976532 223568999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC---------CceecCCCCCCEEeCCCCCeEEeecCC
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE---------NMIHGNLTSSNVLLDEKTNPRIADFGL 682 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~---------~iiH~Dik~~NIll~~~~~~kl~DfG~ 682 (773)
||+++|+|.++++... .++..+..++.||+.||+||| +. ||+||||||+|||++.++.+||+|||+
T Consensus 92 e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH-~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 92 EYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLH-TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp CCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHH-CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHH-hhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 9999999999998753 488899999999999999999 77 999999999999999999999999999
Q ss_pred ccccccccc-------cceeeccCccccccccccCC-------CCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 683 SRLMTAAAN-------TNVIATAGTLGYRAPELSKL-------KNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 683 a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 987653221 11223469999999999876 4567789999999999999999887654
No 249
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=291.01 Aligned_cols=198 Identities=25% Similarity=0.444 Sum_probs=168.3
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|.+.+.||+|+||.||+|... +|+.||+|.+.... ...++.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 107 (314)
T 3com_A 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVMEYCG 107 (314)
T ss_dssp EEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEeecCC
Confidence 345788999999999999875 58999999997543 45678999999999999999999999954 558999999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccccee
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVI 695 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 695 (773)
+++|.+++.... ..+++..+..++.||+.||.||| +.|++||||||+||+++.++.+||+|||.+........ ...
T Consensus 108 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~ 183 (314)
T 3com_A 108 AGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLH-FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KRN 183 (314)
T ss_dssp TEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CBC
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-ccC
Confidence 999999997542 34789999999999999999999 99999999999999999999999999999976643322 223
Q ss_pred eccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 696 ATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 696 ~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
...||+.|+|||.+.+..++.++||||||+++|||++|+.||...+
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 229 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 3468999999999998899999999999999999999999997643
No 250
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=298.37 Aligned_cols=200 Identities=23% Similarity=0.442 Sum_probs=171.6
Q ss_pred HHhhcccccccceEEEEEEe-----CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCC-CeEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-----EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPK-GEKLLV 610 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~lV 610 (773)
+.+.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++.... ...++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 45678999999999999984 368899999998766666778999999999999999999999985433 367999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 123 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp ECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH-hCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 99999999999998753 34789999999999999999999 9999999999999999999999999999998765433
Q ss_pred ccc--eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 691 NTN--VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 691 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
... .....++..|+|||.+.+..++.++||||||+++|||+||+.||..
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 211 1223467789999999888899999999999999999999998763
No 251
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=6e-33 Score=295.06 Aligned_cols=200 Identities=24% Similarity=0.330 Sum_probs=162.1
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEEC-------------
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG------------- 602 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------------- 602 (773)
|.+.+.||+|+||.||+|... +++.||+|++........+++.+|++++++++||||+++++++..
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 345688999999999999876 588999999987666667789999999999999999999998742
Q ss_pred CCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC-CCCCeEEeecC
Q 041878 603 PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD-EKTNPRIADFG 681 (773)
Q Consensus 603 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~-~~~~~kl~DfG 681 (773)
.....++||||++ |+|.++++.. .++...+..++.||+.||+||| +.||+||||||+||+++ +++.+||+|||
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIH-SANVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH-HTTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred ccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHH-hCCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 2347799999997 6999998753 3788999999999999999999 99999999999999997 56789999999
Q ss_pred Cccccccccc--cceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 682 LSRLMTAAAN--TNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 682 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
+++....... .......+|+.|+|||.+.. ..++.++|||||||++|||++|+.||...+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 230 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH
Confidence 9987643221 11223457899999998754 6789999999999999999999999986553
No 252
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.98 E-value=1.4e-32 Score=290.22 Aligned_cols=201 Identities=21% Similarity=0.388 Sum_probs=167.9
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccC----cccHHHHHHHHHHHHccCCCceEEeEEEEECC-CCeEEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT----TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP-KGEKLLVF 611 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~lV~ 611 (773)
.+.+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++... ....++||
T Consensus 8 ~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (305)
T 2wtk_C 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM 87 (305)
T ss_dssp CCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEE
T ss_pred eEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEe
Confidence 45688999999999999864 68899999997542 23467899999999999999999999998543 44789999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||++++ |.+++.... ...+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 88 e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH-~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 164 (305)
T 2wtk_C 88 EYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLH-SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164 (305)
T ss_dssp ECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred hhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHH-HCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence 999876 878777643 345899999999999999999999 99999999999999999999999999999987653322
Q ss_pred -cceeeccCccccccccccCCCC--CCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 -TNVIATAGTLGYRAPELSKLKN--ANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 -~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||...+
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 2223456899999999887644 3789999999999999999999997643
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.1e-32 Score=294.09 Aligned_cols=201 Identities=26% Similarity=0.425 Sum_probs=164.5
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECC-----CCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGP-----KGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-----~~~~~l 609 (773)
|.+.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++... .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 34578999999999999986 478999999996543 3457889999999999 799999999999653 457899
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++|+|.+++.... ...++...+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH-QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp EEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred EEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 999999999999998753 234788999999999999999999 899999999999999999999999999998765432
Q ss_pred cccceeeccCccccccccccC-----CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSK-----LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 183 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 183 VG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 21 122346899999999886 5678999999999999999999999997643
No 254
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.98 E-value=1.6e-32 Score=287.24 Aligned_cols=198 Identities=27% Similarity=0.403 Sum_probs=169.3
Q ss_pred HHHhhcccccccceEEEEEEeC-CCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 536 LCATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
+|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++. ..+..++|||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e 101 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGE 101 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-CCCeEEEEEE
Confidence 3556789999999999999875 78999999986542 345678999999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC---CCeEEeecCCccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMTAA 689 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~a~~~~~~ 689 (773)
|+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.+ +.+||+|||++......
T Consensus 102 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 102 LYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH-KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred ccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 999999999987653 3789999999999999999999 9999999999999999764 46999999998865433
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. .....+|+.|+|||.+.+ .++.++||||+|+++|||++|+.||...+
T Consensus 178 ~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (287)
T 2wei_A 178 TK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (287)
T ss_dssp SS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence 22 223347899999998875 48999999999999999999999997654
No 255
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.98 E-value=1.9e-33 Score=296.46 Aligned_cols=203 Identities=26% Similarity=0.440 Sum_probs=153.0
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|... +++.||||++.... ....+++.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 95 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWLVMKLL 95 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEEEEECC
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEEEehhc
Confidence 346789999999999999864 68999999986543 3345678899999999999999999999954 45899999999
Q ss_pred CCCCHHHHHhhc-----CCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 615 PKGSLASFLHAR-----GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 615 ~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
++++|.+++... .....+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 999999998752 12345899999999999999999999 899999999999999999999999999998765433
Q ss_pred cc----cceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 690 AN----TNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 690 ~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
.. .......||+.|+|||.+.. ..++.++||||+|+++|||++|+.||...+
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 231 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence 21 11223468999999998865 568999999999999999999999997644
No 256
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=8.2e-32 Score=289.94 Aligned_cols=281 Identities=26% Similarity=0.365 Sum_probs=245.1
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|+++.+++. ++ +.++++|++|+|++|.+++. +.+..+++|++|+|++|++++..+ +..+++|++|++
T Consensus 66 ~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEEC
Confidence 4789999999999864 33 99999999999999999863 469999999999999999996543 899999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +.. +++|+.|++++|
T Consensus 140 ~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~-----l~~L~~L~l~~n 209 (347)
T 4fmz_A 140 GANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LAS-----LTSLHYFTAYVN 209 (347)
T ss_dssp TTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGG-----CTTCCEEECCSS
T ss_pred CCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccC-----CCccceeecccC
Confidence 999776554 448999999999999999986544 8899999999999999985433 333 348999999999
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcch
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPE 330 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 330 (773)
.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|++|++++|++++. .
T Consensus 210 ~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~ 281 (347)
T 4fmz_A 210 QITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--S 281 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--G
T ss_pred CCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--h
Confidence 9997665 8899999999999999996544 89999999999999999864 4688999999999999999875 4
Q ss_pred hhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCC
Q 041878 331 GLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 331 ~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 397 (773)
.+..+++|+.|++++|++++..+..++.+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 282 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 282 VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 68899999999999999999999999999999999999999997666 889999999999999985
No 257
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.98 E-value=1.3e-32 Score=293.49 Aligned_cols=201 Identities=27% Similarity=0.406 Sum_probs=168.4
Q ss_pred HHhhcccccccceEEEEEEe--CCCCEEEEEEecccCc--ccHHHHHHHHHHHHcc---CCCceEEeEEEEEC----CCC
Q 041878 537 CATAEIMGKSTYGTAYKATL--EDGSEVAVKRLREKTT--KGQKEFEAEAAAIGKI---HHPNLLALRAYYLG----PKG 605 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----~~~ 605 (773)
|.+.+.||+|+||.||+|.. .+|+.||+|+++.... .....+.+|+.+++++ +||||+++++++.. ...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 45678999999999999987 4678899999865322 2234566777777766 89999999999852 344
Q ss_pred eEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 606 EKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 606 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
..++||||++ |+|.+++.... ...+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH-~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred eEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 7899999997 69999998754 234789999999999999999999 99999999999999999999999999999986
Q ss_pred cccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 170 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (326)
T 1blx_A 170 YSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224 (326)
T ss_dssp CCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 64332 22334689999999999988999999999999999999999999976554
No 258
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.98 E-value=9.6e-33 Score=299.79 Aligned_cols=195 Identities=26% Similarity=0.388 Sum_probs=162.7
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCC-----eEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG-----EKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~~ 608 (773)
|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++..... ..+
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 456788999999999999864 688999999975432 235678899999999999999999999954332 239
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||++ ++|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 124 lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIH-SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH-HCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 9999997 688887743 2789999999999999999999 89999999999999999999999999999976543
Q ss_pred ccccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
. .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 197 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 247 (371)
T 4exu_A 197 E----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247 (371)
T ss_dssp -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred C----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 2 233468999999998876 7889999999999999999999999976553
No 259
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=5.6e-33 Score=322.08 Aligned_cols=202 Identities=22% Similarity=0.395 Sum_probs=168.4
Q ss_pred HHHHhhcccccccceEEEEEEeCC----CCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 535 LLCATAEIMGKSTYGTAYKATLED----GSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
-.+.+.+.||+|+||.||+|.+.. +..||||.++.... ...+.+.+|+.++++++||||+++++++ .. +..++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~-~~~~l 467 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TE-NPVWI 467 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CS-SSCEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ec-CceEE
Confidence 345677899999999999998642 45799999875433 3346799999999999999999999998 33 46899
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++|+|.++++... ..+++..+..++.||+.||.||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH-~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH-hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 999999999999998653 34789999999999999999999 899999999999999999999999999999876544
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
.........+|+.|+|||.+....++.++|||||||++|||++ |..||.+.+
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 597 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 4333334457889999999988899999999999999999997 999997654
No 260
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=1.3e-32 Score=294.86 Aligned_cols=206 Identities=19% Similarity=0.328 Sum_probs=172.1
Q ss_pred HHhhcccccccceEEEEEEe--CCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCc------eEEeEEEEECCCCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATL--EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN------LLALRAYYLGPKGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~~~ 608 (773)
|.+.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++. ..+..+
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~-~~~~~~ 93 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE-HHGHIC 93 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE-ETTEEE
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc-cCCcEE
Confidence 45678999999999999986 36789999999643 234567889999999987664 999999984 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC-----------------
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE----------------- 671 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~----------------- 671 (773)
+||||+ +++|.+++.... ...+++..+..++.||+.||+||| +.||+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH-~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLH-SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 999999 899999998764 234789999999999999999999 999999999999999987
Q ss_pred --CCCeEEeecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHH
Q 041878 672 --KTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWV 749 (773)
Q Consensus 672 --~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~ 749 (773)
++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred ccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 6689999999997643322 2346899999999999899999999999999999999999999876654444433
Q ss_pred HH
Q 041878 750 AS 751 (773)
Q Consensus 750 ~~ 751 (773)
.+
T Consensus 247 ~~ 248 (339)
T 1z57_A 247 ER 248 (339)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 261
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=1.8e-32 Score=300.85 Aligned_cols=201 Identities=20% Similarity=0.257 Sum_probs=169.2
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccC--------CCceEEeEEEEEC---CC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH--------HPNLLALRAYYLG---PK 604 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~---~~ 604 (773)
|.+.++||+|+||+||+|.. .+++.||||+++.. ....+.+.+|++++++++ |+||+++++++.. ..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 56678999999999999986 46889999999643 334567889999999996 7889999999852 34
Q ss_pred CeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeCCCC----------
Q 041878 605 GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLDEKT---------- 673 (773)
Q Consensus 605 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~~~~---------- 673 (773)
...++||||+ ++++.+++.... ...+++..++.++.||+.||+||| ++ ||+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH-~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 118 THICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLH-TKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH-HTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred ceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH-HhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 4789999999 667777766543 244899999999999999999999 77 999999999999999775
Q ss_pred ---------------------------------------CeEEeecCCccccccccccceeeccCccccccccccCCCCC
Q 041878 674 ---------------------------------------NPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNA 714 (773)
Q Consensus 674 ---------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 714 (773)
.+||+|||.+...... .....||+.|+|||++.+..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCCC
Confidence 7999999999876433 223468999999999998899
Q ss_pred CcchhhHHHHHHHHHHHcCCCCCCCCCCCCh
Q 041878 715 NTKTDVYSLGVIILELLTGKSPGEPMNGMDL 745 (773)
Q Consensus 715 ~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~ 745 (773)
+.++|||||||++|||+||+.||...+..+.
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~ 301 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEY 301 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSS
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCccccc
Confidence 9999999999999999999999988765543
No 262
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.98 E-value=3.5e-32 Score=292.19 Aligned_cols=198 Identities=27% Similarity=0.407 Sum_probs=166.9
Q ss_pred HHHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHc--cCCCceEEeEEEEECCC---CeEEEE
Q 041878 536 LCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGK--IHHPNLLALRAYYLGPK---GEKLLV 610 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---~~~~lV 610 (773)
.|.+.+.||+|+||.||+|... |+.||||++... ....+.+|+++++. ++||||+++++++.... ...++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 4556789999999999999874 899999999643 35677888888887 78999999999996554 278999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc-------CCCceecCCCCCCEEeCCCCCeEEeecCCc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV-------EENMIHGNLTSSNVLLDEKTNPRIADFGLS 683 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~-------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a 683 (773)
|||+++|+|.+++.+. .+++..++.++.|++.||+|||. +.+|+||||||+||+++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 9999999999999864 37899999999999999999994 578999999999999999999999999999
Q ss_pred ccccccccc---ceeeccCccccccccccCCC------CCCcchhhHHHHHHHHHHHcC----------CCCCCCCC
Q 041878 684 RLMTAAANT---NVIATAGTLGYRAPELSKLK------NANTKTDVYSLGVIILELLTG----------KSPGEPMN 741 (773)
Q Consensus 684 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~el~tg----------~~P~~~~~ 741 (773)
......... ......||+.|+|||++.+. .++.++|||||||++|||+|| ..||....
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 876544322 12334689999999988765 234689999999999999999 78887643
No 263
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.98 E-value=1.2e-31 Score=300.50 Aligned_cols=282 Identities=30% Similarity=0.454 Sum_probs=153.4
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.+++..+ +.++++|++|+|++|.+++..+ ++.+++|++|+|++|++++..+ +.++++|++|+|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 357777888777775443 7777888888888887775544 7777888888888887775433 777777888888
Q ss_pred cCCCCCCCCccccccccc---------------------cceeecccccccccCCccccCCCccceeeccccccccccCC
Q 041878 171 SNNALIGAIPPSLANSTR---------------------LYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPN 229 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~---------------------L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 229 (773)
++|.+++ ++ .+..+++ |++|++++|.+++. ..+..+++|++|++++|++++..|
T Consensus 142 ~~n~l~~-~~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 216 (466)
T 1o6v_A 142 SSNTISD-IS-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP- 216 (466)
T ss_dssp EEEEECC-CG-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCCccCC-Ch-hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-
Confidence 7777764 22 2444444 44444444444321 123344444444444444443322
Q ss_pred cccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCccccc
Q 041878 230 NWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFT 309 (773)
Q Consensus 230 ~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 309 (773)
++. +++|+.|++++|.+++. ..+..+++|+.|++++|++++..+ +..+++|++|++++|.+++..+ +.
T Consensus 217 -~~~-----l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~ 284 (466)
T 1o6v_A 217 -LGI-----LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LA 284 (466)
T ss_dssp -GGG-----CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GT
T ss_pred -ccc-----cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--cc
Confidence 111 12444555555544432 234444555555555555544322 4455555555555555553332 44
Q ss_pred ccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEE
Q 041878 310 NITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSF 389 (773)
Q Consensus 310 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 389 (773)
.+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 55555555555555544333 4455555555555555554433 44555555555555555543 345555555555
Q ss_pred EeecccCCCCCc
Q 041878 390 NVSYNNLSGSVP 401 (773)
Q Consensus 390 ~ls~N~l~g~~p 401 (773)
++++|++++..|
T Consensus 359 ~l~~n~l~~~~~ 370 (466)
T 1o6v_A 359 SAGHNQISDLTP 370 (466)
T ss_dssp ECCSSCCCBCGG
T ss_pred eCCCCccCccch
Confidence 555555555444
No 264
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=1.6e-32 Score=296.18 Aligned_cols=198 Identities=22% Similarity=0.339 Sum_probs=166.2
Q ss_pred HhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHHHHHccCCCceEEeEEEEECC----CCeEEEEE
Q 041878 538 ATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAAAIGKIHHPNLLALRAYYLGP----KGEKLLVF 611 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~~~~~lV~ 611 (773)
.+.+.||+|+||.||+|... +|+.||||++..... ....++.+|++++++++||||+++++++... ....++||
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 45688999999999999865 688999999975432 3356788999999999999999999988543 25789999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
||++ ++|.+++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 94 e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH-~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (353)
T 2b9h_A 94 ELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLH-GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167 (353)
T ss_dssp CCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred eccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH-HCCeecCCCCHHHeEEcCCCcEEEEecccccccccccc
Confidence 9996 6999998763 3789999999999999999999 99999999999999999999999999999987653221
Q ss_pred c---------ceeeccCccccccccccC-CCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 692 T---------NVIATAGTLGYRAPELSK-LKNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 692 ~---------~~~~~~gt~~y~aPE~~~-~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
. ......||+.|+|||++. ...++.++||||+||++|||++|+.||.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 112346899999999765 4778999999999999999999999997655
No 265
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.98 E-value=9.7e-33 Score=289.18 Aligned_cols=198 Identities=24% Similarity=0.386 Sum_probs=152.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcc-cH-HHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK-GQ-KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|.+.+.||+|+||.||+|.. .+|+.||||+++..... .. ..+.++...++.++||||+++++++. ..+..++||||
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~ 87 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-REGDVWICMEL 87 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSSEEEEEEC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-ccCCEEEEEeh
Confidence 45678999999999999986 47889999999754322 22 33445555688889999999999995 45589999999
Q ss_pred cCCCCHHHHHhhc-CCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeCCCCCeEEeecCCccccccccc
Q 041878 614 MPKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 614 ~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~ 691 (773)
++ |+|.+++... .....+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||++........
T Consensus 88 ~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 88 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp CS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-HHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred hc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh-hcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 97 5888887652 12345899999999999999999999 76 999999999999999999999999999987654322
Q ss_pred cceeeccCcccccccccc----CCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELS----KLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
. ....||+.|+|||.+ ....++.++||||+||++|||++|+.||..
T Consensus 166 ~--~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 166 K--DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred c--cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 2 233589999999985 566789999999999999999999999975
No 266
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.98 E-value=4.6e-33 Score=291.79 Aligned_cols=200 Identities=27% Similarity=0.419 Sum_probs=160.5
Q ss_pred HHhhcccccccceEEEEEEeC--CCC--EEEEEEecccC---cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE--DGS--EVAVKRLREKT---TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~--~g~--~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~l 609 (773)
|.+.+.||+|+||+||+|.+. +++ .||||+++... ....+++.+|++++++++||||+++++++.. . ..++
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-~~~~ 97 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-P-PMKM 97 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-SCEE
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-C-Ccee
Confidence 456789999999999999853 333 68999987542 3345788999999999999999999999853 3 4889
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
|+||+++++|.+++.... ..+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 98 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH-~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHH-HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHH-hCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 999999999999998752 34789999999999999999999 999999999999999999999999999999876543
Q ss_pred cccc--eeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 041878 690 ANTN--VIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLT-GKSPGEPMN 741 (773)
Q Consensus 690 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~~ 741 (773)
.... .....+|+.|+|||.+....++.++||||||+++|||++ |+.||...+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 229 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC
Confidence 3221 223457889999999988889999999999999999999 999997654
No 267
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=1.3e-32 Score=295.19 Aligned_cols=198 Identities=25% Similarity=0.407 Sum_probs=163.5
Q ss_pred HhhcccccccceEEEEEEe-CCCCEEEEEEecccC-cccHHHHHHHHHH-HHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 538 ATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKT-TKGQKEFEAEAAA-IGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 538 ~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
...+.||+|+||.||+|.. .+|+.||||+++... .....++..|+.. ++.++||||+++++++.. .+..++||||+
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~~ 132 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICMELM 132 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-SSCEEEEECCC
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-CCcEEEEHHHh
Confidence 4568899999999999986 578999999997543 2334556666665 778899999999999954 45899999999
Q ss_pred CCCCHHHHHhhc-CCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 615 PKGSLASFLHAR-GPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 615 ~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
++ +|.+++... .....+++..+..++.||+.||+||| +. ||+||||||+||+++.++.+||+|||+++.......
T Consensus 133 ~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH-~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 209 (340)
T 3an0_A 133 DT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA- 209 (340)
T ss_dssp SE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH-HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH-
T ss_pred hC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh-hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc-
Confidence 75 999988753 12345899999999999999999999 65 999999999999999999999999999986643221
Q ss_pred ceeeccCccccccccccC----CCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSK----LKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~----~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
.....||+.|+|||++. ...++.++|||||||++|||+||+.||...
T Consensus 210 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~ 260 (340)
T 3an0_A 210 -KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260 (340)
T ss_dssp -HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred -cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 22346899999999864 447899999999999999999999999753
No 268
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.98 E-value=7.4e-34 Score=299.69 Aligned_cols=195 Identities=28% Similarity=0.428 Sum_probs=150.0
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHc--cCCCceEEeEEEEECCCC---eEEEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGK--IHHPNLLALRAYYLGPKG---EKLLVF 611 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~---~~~lV~ 611 (773)
|.+.+.||+|+||.||+|.+. |+.||||++... ....+.+|.+++.. ++||||+++++++..... ..++||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 345789999999999999875 899999998643 34567778888887 789999999999865442 679999
Q ss_pred eecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc-------CCCceecCCCCCCEEeCCCCCeEEeecCCcc
Q 041878 612 DFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV-------EENMIHGNLTSSNVLLDEKTNPRIADFGLSR 684 (773)
Q Consensus 612 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~-------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 684 (773)
||+++|+|.+++++. .+++..+..++.|++.||+|||. +.+|+||||||+||+++.++.+||+|||++.
T Consensus 81 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 81 DYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred eccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 999999999999764 26778889999999999999994 6799999999999999999999999999997
Q ss_pred cccccccc---ceeeccCccccccccccCCC------CCCcchhhHHHHHHHHHHHcC----------CCCCCC
Q 041878 685 LMTAAANT---NVIATAGTLGYRAPELSKLK------NANTKTDVYSLGVIILELLTG----------KSPGEP 739 (773)
Q Consensus 685 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dvws~Gv~l~el~tg----------~~P~~~ 739 (773)
........ ......||+.|+|||++.+. .+++++|||||||++|||+|| ..||..
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 66543322 12233699999999998765 344689999999999999999 778765
No 269
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=4e-32 Score=296.20 Aligned_cols=199 Identities=23% Similarity=0.325 Sum_probs=166.7
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccC-CC-----ceEEeEEEEECCCCeEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HP-----NLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~~~l 609 (773)
|.+.++||+|+||+||+|... +++.||||+++.. .....++..|+.+++.++ |+ +++++++++.. .+..++
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~l 133 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCL 133 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEEEE
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCceEE
Confidence 456789999999999999865 6788999999743 233567788999998885 55 49999999854 458999
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc-CCCceecCCCCCCEEeC--CCCCeEEeecCCcccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV-EENMIHGNLTSSNVLLD--EKTNPRIADFGLSRLM 686 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~-~~~iiH~Dik~~NIll~--~~~~~kl~DfG~a~~~ 686 (773)
||||++ |+|.+++..... ..+++..+..++.||+.||.|||. +.||+||||||+|||++ .++.+||+|||+++..
T Consensus 134 v~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp EEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 999996 599999987542 348999999999999999999994 47999999999999995 4778999999999876
Q ss_pred ccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC
Q 041878 687 TAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743 (773)
Q Consensus 687 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~ 743 (773)
... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...+..
T Consensus 212 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 212 GQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp TCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 432 22346899999999999999999999999999999999999999876543
No 270
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=2.6e-32 Score=295.47 Aligned_cols=202 Identities=22% Similarity=0.346 Sum_probs=153.7
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECCCC------eEEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG------EKLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~~l 609 (773)
|.+.+.||+|+||.||+|... +|+.||||++..... ....+.+|++.++.++||||+++++++..... ..++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l 103 (360)
T 3e3p_A 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV 103 (360)
T ss_dssp EEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence 445788999999999999874 689999999865432 23456778888999999999999999854321 2789
Q ss_pred EEeecCCCCHHHHHhh-cCCCCccCHHHHHHHHHHHHHHHHHhcc-CCCceecCCCCCCEEeCC-CCCeEEeecCCcccc
Q 041878 610 VFDFMPKGSLASFLHA-RGPETIVNWATRMSIAIGIARGLNYLHV-EENMIHGNLTSSNVLLDE-KTNPRIADFGLSRLM 686 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~al~yLH~-~~~iiH~Dik~~NIll~~-~~~~kl~DfG~a~~~ 686 (773)
||||+++ +|.+.+.. ......+++..+..++.|++.|+.|||. +.||+||||||+|||++. ++.+||+|||+++..
T Consensus 104 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp EEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred Eeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 9999976 55544443 2234457889999999999999999994 689999999999999997 889999999999876
Q ss_pred ccccccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 687 TAAANTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 687 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.
T Consensus 183 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 183 SPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp CTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 54332 2344689999999988654 489999999999999999999999987554
No 271
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=5.2e-31 Score=307.48 Aligned_cols=312 Identities=21% Similarity=0.224 Sum_probs=253.2
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.+++..+..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 36889999999999877888999999999999999999887888999999999999999999887788999999999999
Q ss_pred cCCCCCC-CCccccccccccceeecccccccccCCccccCCC--------------------------------------
Q 041878 171 SNNALIG-AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLP-------------------------------------- 211 (773)
Q Consensus 171 s~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-------------------------------------- 211 (773)
++|.+++ .+|..++.+++|++|+|++|++++..+..+..+.
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccc
Confidence 9999985 4678889999999999999988765444332211
Q ss_pred --------------------------------------------------------------------------------
Q 041878 212 -------------------------------------------------------------------------------- 211 (773)
Q Consensus 212 -------------------------------------------------------------------------------- 211 (773)
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence
Q ss_pred -------------ccceeeccccccccccCCccccc--------------ccCcccccceeecccccccc----------
Q 041878 212 -------------SLSVLALQHNNLSGSVPNNWGVL--------------AGNKSYQLQFLNLDHNLIAG---------- 254 (773)
Q Consensus 212 -------------~L~~L~L~~N~l~~~~p~~~~~l--------------~~~~~~~L~~L~L~~n~l~~---------- 254 (773)
+|+.|++.+|.+.+..+..+..+ ....+++|+.|++++|.+..
T Consensus 316 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 316 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp CEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhh
Confidence 12222222222221111100000 00123456666666655431
Q ss_pred ---------------------------------------c-cCccCCCCCCccEEECCCCcccCCCCCCcCcccccceec
Q 041878 255 ---------------------------------------T-IPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLD 294 (773)
Q Consensus 255 ---------------------------------------~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 294 (773)
. .+..+..+++++.++++.|++.+..+..+..+++|++|+
T Consensus 396 ~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~ 475 (635)
T 4g8a_A 396 TISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 475 (635)
T ss_dssp CSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred hhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 1 123456778899999999999999999999999999999
Q ss_pred ccccccc-ccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCc
Q 041878 295 LSYNAIG-GSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFT 373 (773)
Q Consensus 295 Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (773)
|++|.+. +..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 476 Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCC
T ss_pred hhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCC
Confidence 9999854 467889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhcc-CccCEEEeecccCCCCCch
Q 041878 374 GEISPSLASL-ANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 374 ~~~~~~~~~l-~~L~~L~ls~N~l~g~~p~ 402 (773)
+..|..+..+ ++|+.|+|++|+|+|.+.-
T Consensus 556 ~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 556 TSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp BCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999988 6899999999999998863
No 272
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.3e-31 Score=282.15 Aligned_cols=291 Identities=19% Similarity=0.226 Sum_probs=252.0
Q ss_pred CCCCCCCCCCCCCCCcceEeeC-----------CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCC
Q 041878 69 RSWNDSGVGACSGGWAGIKCVK-----------GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGF 137 (773)
Q Consensus 69 ~sW~~~~~~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~ 137 (773)
..|.......|.|.|+.+.|.. ..++.|+|+++.+++..+..+.++++|++|+|++|.+++..|..++.
T Consensus 19 ~~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (330)
T 1xku_A 19 EPMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP 98 (330)
T ss_dssp ---CCCCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT
T ss_pred ccccCCCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC
Confidence 4453323344555689999942 36788999999999888889999999999999999999988999999
Q ss_pred CCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccc--cCCccccCCCccce
Q 041878 138 LPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLG--SIPLSLTRLPSLSV 215 (773)
Q Consensus 138 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~ 215 (773)
+++|++|+|++|+++ .+|..+. ++|++|++++|.+++..+..+.++++|++|+|++|.+.. ..+..+.++++|++
T Consensus 99 l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~ 175 (330)
T 1xku_A 99 LVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSY 175 (330)
T ss_dssp CTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCE
T ss_pred CCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCE
Confidence 999999999999999 6676665 899999999999998888889999999999999999964 77888999999999
Q ss_pred eeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceecc
Q 041878 216 LALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDL 295 (773)
Q Consensus 216 L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 295 (773)
|++++|+++. +|..+. ++|++|++++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|
T Consensus 176 L~l~~n~l~~-l~~~~~-------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 247 (330)
T 1xku_A 176 IRIADTNITT-IPQGLP-------PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247 (330)
T ss_dssp EECCSSCCCS-CCSSCC-------TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred EECCCCcccc-CCcccc-------ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEEC
Confidence 9999999984 555432 48999999999999999999999999999999999999888889999999999999
Q ss_pred ccccccccCcccccccccCceEEccCCCCCCCcchhhcc------ccccccccccCccccc--ccccccCCCCcCceeec
Q 041878 296 SYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLER------LQNLTVLNLKNNQFKG--HIPETIGNISGINQLDL 367 (773)
Q Consensus 296 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~------l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~L 367 (773)
++|+++ .+|..+..+++|++|++++|++++..+..+.. .+.|+.|++++|.+.. ..|..+..+.+|+.++|
T Consensus 248 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L 326 (330)
T 1xku_A 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 326 (330)
T ss_dssp CSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC
T ss_pred CCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEe
Confidence 999999 78888999999999999999999888777754 3789999999999864 56788999999999999
Q ss_pred CCcc
Q 041878 368 SEND 371 (773)
Q Consensus 368 ~~N~ 371 (773)
++|+
T Consensus 327 ~~N~ 330 (330)
T 1xku_A 327 GNYK 330 (330)
T ss_dssp ----
T ss_pred cccC
Confidence 9985
No 273
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.4e-32 Score=288.68 Aligned_cols=285 Identities=22% Similarity=0.249 Sum_probs=183.1
Q ss_pred CCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCC--C
Q 041878 77 GACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSG--S 154 (773)
Q Consensus 77 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~ 154 (773)
+.|.|.|.+|.|.... ++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++. .
T Consensus 3 ~~C~C~~~~l~c~~~~----------l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKG----------LT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp TTCEEETTEEECCSSC----------CS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CCCeeCCCEEEcCCCC----------cc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 3565668888885433 22 2333222 567777777777775444456777777777777777762 2
Q ss_pred CCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCC-ccccCCCccceeeccccccccccCCcccc
Q 041878 155 IPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIP-LSLTRLPSLSVLALQHNNLSGSVPNNWGV 233 (773)
Q Consensus 155 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 233 (773)
.|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|++++
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-------- 140 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-------- 140 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE--------
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc--------
Confidence 3455566777777777777776 455566667777777777776664433 345555555555555555554
Q ss_pred cccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccC-CCCCCcCcccccceeccccccccccCcccccccc
Q 041878 234 LAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVG-PIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNIT 312 (773)
Q Consensus 234 l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 312 (773)
..+..+..+++|++|++++|++++ .+|..+..+++|++|+|++|++++..|..+..++
T Consensus 141 ---------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 199 (306)
T 2z66_A 141 ---------------------AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 199 (306)
T ss_dssp ---------------------CSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred ---------------------cchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC
Confidence 444555566666666666666665 4566666666777777777777666666666677
Q ss_pred cCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCC-cCceeecCCccCccCCC--chhhccCccCEE
Q 041878 313 SLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNIS-GINQLDLSENDFTGEIS--PSLASLANLTSF 389 (773)
Q Consensus 313 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L 389 (773)
+|++|+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|++|+|++|++++... .....+...+.+
T Consensus 200 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~ 279 (306)
T 2z66_A 200 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQL 279 (306)
T ss_dssp TCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGG
T ss_pred CCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhh
Confidence 777777777777666666677777777777777777777777777774 77888888887776432 112223444555
Q ss_pred EeecccCCCCCchhh
Q 041878 390 NVSYNNLSGSVPPLL 404 (773)
Q Consensus 390 ~ls~N~l~g~~p~~~ 404 (773)
.+..|.+.|..|..+
T Consensus 280 ~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 280 LVEVERMECATPSDK 294 (306)
T ss_dssp BSCGGGCBEEESGGG
T ss_pred hccccccccCCchhh
Confidence 666777777777655
No 274
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=3.5e-31 Score=283.03 Aligned_cols=283 Identities=20% Similarity=0.264 Sum_probs=250.1
Q ss_pred CCCCCCCCcceEeeC-----------CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceE
Q 041878 76 VGACSGGWAGIKCVK-----------GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGV 144 (773)
Q Consensus 76 ~~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 144 (773)
...|.|.|+.+.|.. ..++.|+|+++.+++..+..+.++++|++|+|++|.+++..|..++.+++|++|
T Consensus 28 p~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 107 (332)
T 2ft3_A 28 PFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107 (332)
T ss_dssp CSSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEE
T ss_pred CCCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEE
Confidence 344555699999952 368899999999998888899999999999999999999889999999999999
Q ss_pred EcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeeccccccc--ccCCccccCCCccceeeccccc
Q 041878 145 YLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLL--GSIPLSLTRLPSLSVLALQHNN 222 (773)
Q Consensus 145 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~--~~~~~~l~~l~~L~~L~L~~N~ 222 (773)
+|++|+++ .+|..+. ++|++|+|++|.+++..+..+.++++|++|++++|.++ +..+..+..+ +|++|++++|+
T Consensus 108 ~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 108 YISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp ECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSB
T ss_pred ECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCC
Confidence 99999999 6776665 89999999999999776777999999999999999996 4778888888 99999999999
Q ss_pred cccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccc
Q 041878 223 LSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGG 302 (773)
Q Consensus 223 l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 302 (773)
+++ +|..+. ++|++|++++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 184 l~~-l~~~~~-------~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 254 (332)
T 2ft3_A 184 LTG-IPKDLP-------ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS- 254 (332)
T ss_dssp CSS-CCSSSC-------SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCc-cCcccc-------CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-
Confidence 995 555443 38999999999999999999999999999999999999888889999999999999999999
Q ss_pred cCcccccccccCceEEccCCCCCCCcchhhcc------ccccccccccCcccc--cccccccCCCCcCceeecCCcc
Q 041878 303 SFPVTFTNITSLVSLNLENNRLGNKIPEGLER------LQNLTVLNLKNNQFK--GHIPETIGNISGINQLDLSEND 371 (773)
Q Consensus 303 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~------l~~L~~L~ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~ 371 (773)
.+|..+..+++|+.|++++|++++..+..+.. ..+|+.|++++|.+. +..|..+..+++|+.|+|++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 78888999999999999999999888777765 367999999999988 6778889999999999999985
No 275
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=7e-31 Score=292.19 Aligned_cols=253 Identities=21% Similarity=0.182 Sum_probs=157.7
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|+++.+++. | .++.+++|++|+|++|.+++. | ++.+++|++|+|++|++++. | ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4567777777777763 3 577777888888888877763 3 77777788888888777764 3 777777888888
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++ +| ++.+++|++|++++|++++. .+.++++|++|++++|+..+.++ ++. +++|++|++++|
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~--~~~-----l~~L~~L~ls~n 180 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTP-----QTQLTTLDCSFN 180 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC--CTT-----CTTCCEEECCSS
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc--ccc-----CCcCCEEECCCC
Confidence 8777775 33 67777777777777777753 26667777777777775443431 222 236666666666
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcch
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPE 330 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 330 (773)
.+++. | ++.+++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++|+.|++++|++++..+.
T Consensus 181 ~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 181 KITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred cccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 66653 2 55666666666666666653 25666666666666666665 33 55666666666666666655444
Q ss_pred hhcccc-------ccccccccCcccccccccccCCCCcCceeecCCccCccC
Q 041878 331 GLERLQ-------NLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGE 375 (773)
Q Consensus 331 ~l~~l~-------~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 375 (773)
.+..+. +|+.|++++|.+.+.+| ++.+++|+.|+|++|.+.+.
T Consensus 252 ~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~ 301 (457)
T 3bz5_A 252 TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYL 301 (457)
T ss_dssp TCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCE
T ss_pred HCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccce
Confidence 444333 34444555554444443 23444444444444444333
No 276
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=294.75 Aligned_cols=195 Identities=26% Similarity=0.388 Sum_probs=162.6
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc--ccHHHHHHHHHHHHccCCCceEEeEEEEECCCC-----eEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT--KGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKG-----EKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~~ 608 (773)
|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++..... ..+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 345688999999999999864 689999999975432 235678899999999999999999999954432 359
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTA 688 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~ 688 (773)
+||||++ ++|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 106 lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH-~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIH-SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHH-HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred EEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 9999997 688877643 2789999999999999999999 99999999999999999999999999999976543
Q ss_pred ccccceeeccCccccccccccCC-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 689 AANTNVIATAGTLGYRAPELSKL-KNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 689 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
. .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 179 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 229 (353)
T 3coi_A 179 E----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229 (353)
T ss_dssp ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH
T ss_pred C----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 2 223468999999998876 6789999999999999999999999976553
No 277
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=7.6e-32 Score=284.10 Aligned_cols=192 Identities=24% Similarity=0.445 Sum_probs=158.2
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECC------------
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP------------ 603 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------------ 603 (773)
|.+.+.||+|+||.||+|... +|+.||||++... ....+.+.+|+.++++++||||+++++++...
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (303)
T 1zy4_A 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKK 86 (303)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------C
T ss_pred chhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccccc
Confidence 456789999999999999864 7899999999643 23456789999999999999999999988542
Q ss_pred CCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCc
Q 041878 604 KGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLS 683 (773)
Q Consensus 604 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a 683 (773)
.+..++||||+++|+|.++++... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||.+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH-~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 87 KSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp EEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHH-HTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred CCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHH-hCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 346789999999999999998643 34788899999999999999999 899999999999999999999999999999
Q ss_pred ccccccc-------------ccceeeccCccccccccccCCC-CCCcchhhHHHHHHHHHHHc
Q 041878 684 RLMTAAA-------------NTNVIATAGTLGYRAPELSKLK-NANTKTDVYSLGVIILELLT 732 (773)
Q Consensus 684 ~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvws~Gv~l~el~t 732 (773)
....... ........||+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 8654321 1112334689999999998754 78999999999999999998
No 278
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=6.1e-32 Score=289.27 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=141.7
Q ss_pred hcccccccceEEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccCCCceEEeEEEEECC---CCeEEEEEeecC
Q 041878 540 AEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNLLALRAYYLGP---KGEKLLVFDFMP 615 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---~~~~~lV~e~~~ 615 (773)
.++||+|+||.||+|... +|+.||||++... .....+....++.++||||+++++++... ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 457999999999999875 6899999999642 22223333445677899999999998542 335789999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC---CCeEEeecCCcccccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK---TNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~---~~~kl~DfG~a~~~~~~~~~ 692 (773)
+|+|.+++.+.. ...+++.++..++.||+.||.||| +.||+||||||+||+++.+ +.+||+|||++.......
T Consensus 110 gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH-~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~-- 185 (336)
T 3fhr_A 110 GGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-- 185 (336)
T ss_dssp TEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHH-HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccc--
Confidence 999999998754 245899999999999999999999 8999999999999999864 459999999997654322
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~ 743 (773)
.....+|+.|+|||++....++.++||||+||++|||++|+.||......
T Consensus 186 -~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 235 (336)
T 3fhr_A 186 -LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ 235 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred -cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch
Confidence 22345899999999998888999999999999999999999999775543
No 279
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=1e-31 Score=289.96 Aligned_cols=206 Identities=21% Similarity=0.325 Sum_probs=169.9
Q ss_pred HHhhcccccccceEEEEEEeC-CC-CEEEEEEecccCcccHHHHHHHHHHHHccCCCc------eEEeEEEEECCCCeEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DG-SEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN------LLALRAYYLGPKGEKL 608 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~~~ 608 (773)
|.+.+.||+|+||+||+|... ++ +.||+|+++.. ......+.+|+.++++++|++ ++.+++++. ..+..+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~ 98 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN-FHGHMC 98 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE-ETTEEE
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee-eCCeEE
Confidence 456789999999999999864 44 68999999643 234567888999999998765 888888884 455899
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEe-------------------
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLL------------------- 669 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll------------------- 669 (773)
+||||+ ++++.+++.... ...+++..+..++.||+.||+||| +.||+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH-~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH-TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH-HCCcccCCCCHHHEEEecccccccccccccccccc
Confidence 999999 678888777653 234899999999999999999999 9999999999999999
Q ss_pred CCCCCeEEeecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCChHHHH
Q 041878 670 DEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGMDLPQWV 749 (773)
Q Consensus 670 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~~~~~~~ 749 (773)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 567889999999997643322 2346899999999999999999999999999999999999999876654443433
Q ss_pred HH
Q 041878 750 AS 751 (773)
Q Consensus 750 ~~ 751 (773)
.+
T Consensus 252 ~~ 253 (355)
T 2eu9_A 252 EK 253 (355)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 280
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=1.1e-30 Score=292.84 Aligned_cols=279 Identities=31% Similarity=0.421 Sum_probs=172.3
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|++.++++.. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++..+ ++++++|++|+|
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 467889999998874 44 48899999999999999997654 9999999999999999997665 999999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeec---------------------cccccccccCC
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLAL---------------------QHNNLSGSVPN 229 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L---------------------~~N~l~~~~p~ 229 (773)
++|.+++. +. +.++++|++|+|++|.+++. + .+..+++|++|++ ++|++++. +
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~- 193 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI-S- 193 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-G-
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-h-
Confidence 99999864 43 89999999999999999853 2 3555555555555 44444321 1
Q ss_pred cccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCccccc
Q 041878 230 NWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFT 309 (773)
Q Consensus 230 ~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 309 (773)
.+.. +++|++|++++|.+++..+ ++.+++|+.|++++|++++. ..+..+++|++|++++|.+++..+ +.
T Consensus 194 ~l~~-----l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 194 VLAK-----LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp GGGG-----CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred hhcc-----CCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 1111 2244444444444444333 34444455555555544432 234444555555555555543332 44
Q ss_pred ccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEE
Q 041878 310 NITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSF 389 (773)
Q Consensus 310 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 389 (773)
.+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 45555555555555544333 4445555555555555544322 4445555555555555554333 4445555555
Q ss_pred EeecccCCC
Q 041878 390 NVSYNNLSG 398 (773)
Q Consensus 390 ~ls~N~l~g 398 (773)
++++|++++
T Consensus 337 ~l~~n~l~~ 345 (466)
T 1o6v_A 337 FFYNNKVSD 345 (466)
T ss_dssp ECCSSCCCC
T ss_pred ECCCCccCC
Confidence 555555544
No 281
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=1.3e-30 Score=289.96 Aligned_cols=275 Identities=19% Similarity=0.200 Sum_probs=238.1
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.+++. + ++.+++|++|+|++|.+++. + ++.+++|++|+|++|++++ +| ++.+++|++|+|
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 5788999999999984 3 89999999999999999975 3 8999999999999999997 44 899999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++. + ++.+++|++|++++|+..+.+ .+..+++|++|++++|++++ +| +.. +++|+.|++++|
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~-----l~~L~~L~l~~N 201 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQ-----NKLLNRLNCDTN 201 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTT-----CTTCCEEECCSS
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--ccc-----CCCCCEEECcCC
Confidence 99999974 3 889999999999999766565 48899999999999999996 34 333 448999999999
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccc-------cCceEEccCCC
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNIT-------SLVSLNLENNR 323 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-------~L~~L~Ls~N~ 323 (773)
.+++. .++.+++|+.|++++|++++ +| +..+++|++|++++|++++..+..+.+++ +|+.|++++|+
T Consensus 202 ~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~ 275 (457)
T 3bz5_A 202 NITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNT 275 (457)
T ss_dssp CCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCT
T ss_pred cCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCc
Confidence 99976 48899999999999999997 56 88999999999999999987666665554 56777777777
Q ss_pred CCCCcchhhccccccccccccCccccccccc--------ccCCCCcCceeecCCccCccCCCchhhccCccCEEEeeccc
Q 041878 324 LGNKIPEGLERLQNLTVLNLKNNQFKGHIPE--------TIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNN 395 (773)
Q Consensus 324 l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~--------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~ 395 (773)
+.+.+| ++.+++|+.|++++|.+.+.+|. .+.++++|+.|+|++|++++. + +..+++|+.|++++|+
T Consensus 276 ~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~ 350 (457)
T 3bz5_A 276 QLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAH 350 (457)
T ss_dssp TCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred cCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCC
Confidence 777666 56789999999999998877765 356778999999999999984 3 8899999999999999
Q ss_pred CCC
Q 041878 396 LSG 398 (773)
Q Consensus 396 l~g 398 (773)
++|
T Consensus 351 l~~ 353 (457)
T 3bz5_A 351 IQD 353 (457)
T ss_dssp CCB
T ss_pred CCC
Confidence 998
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=3e-32 Score=310.01 Aligned_cols=201 Identities=26% Similarity=0.440 Sum_probs=172.6
Q ss_pred HHHhhcccccccceEEEEEEe-CCCCEEEEEEeccc-CcccHHHHHHHHHHHHccCCCceEEeEEEEEC-----CCCeEE
Q 041878 536 LCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREK-TTKGQKEFEAEAAAIGKIHHPNLLALRAYYLG-----PKGEKL 608 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~~~ 608 (773)
.|.+.++||+|+||.||+|.. .+|+.||||+++.. .....+.+.+|++++++++||||+++++++.. ..+..+
T Consensus 15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~ 94 (676)
T 3qa8_A 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94 (676)
T ss_dssp --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence 356789999999999999986 46899999998754 33345678999999999999999999998733 145779
Q ss_pred EEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCC---eEEeecCCccc
Q 041878 609 LVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTN---PRIADFGLSRL 685 (773)
Q Consensus 609 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~---~kl~DfG~a~~ 685 (773)
+||||+++|+|.+++........+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||.+..
T Consensus 95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH-s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH-ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH-HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 99999999999999987654455888899999999999999999 899999999999999997765 89999999987
Q ss_pred cccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
...... .....||+.|+|||.+.+..++.++||||+||++|||++|+.||.+
T Consensus 174 ~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 174 LDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp TTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 654332 2335689999999999999999999999999999999999999964
No 283
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=9.5e-32 Score=285.04 Aligned_cols=197 Identities=20% Similarity=0.337 Sum_probs=161.7
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccC--CCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIH--HPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++.. .+..++|||
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~e 108 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME 108 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEEEEEe
Confidence 45678999999999999998889999999997543 334567899999999997 5999999999954 558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||++++ +.+||+|||++.........
T Consensus 109 -~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH-~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 109 -CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH-QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp -CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred -cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 55889999998753 4788999999999999999999 899999999999999965 78999999999876543321
Q ss_pred -ceeeccCccccccccccCC-----------CCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 693 -NVIATAGTLGYRAPELSKL-----------KNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 693 -~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
......||+.|+|||.+.. ..++.++||||||+++|||++|+.||...
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence 1223468999999998765 47888999999999999999999999753
No 284
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=6.5e-32 Score=299.17 Aligned_cols=196 Identities=24% Similarity=0.346 Sum_probs=153.6
Q ss_pred hhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 539 TAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
..++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++. ..+..++||||++ |
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSET-TDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEE-CSSEEEEEECCCS-E
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEe-cCCeEEEEEecCC-C
Confidence 35789999999998777678999999998643 245678899999986 8999999999984 4558999999995 6
Q ss_pred CHHHHHhhcCCCCc----cCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC-------------CCeEEeec
Q 041878 618 SLASFLHARGPETI----VNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK-------------TNPRIADF 680 (773)
Q Consensus 618 ~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~-------------~~~kl~Df 680 (773)
+|.+++........ .++..++.++.||+.||+||| +.||+||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH-HCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99999987542111 123345789999999999999 9999999999999999754 47999999
Q ss_pred CCcccccccccc---ceeeccCccccccccccCC-------CCCCcchhhHHHHHHHHHHHc-CCCCCCCC
Q 041878 681 GLSRLMTAAANT---NVIATAGTLGYRAPELSKL-------KNANTKTDVYSLGVIILELLT-GKSPGEPM 740 (773)
Q Consensus 681 G~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dvws~Gv~l~el~t-g~~P~~~~ 740 (773)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||...
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 999877543321 1223469999999998865 678999999999999999999 99999653
No 285
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=4.4e-32 Score=288.44 Aligned_cols=195 Identities=19% Similarity=0.375 Sum_probs=165.6
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcc------cHHHHHHHHHHHHccC--CCceEEeEEEEECCCCeE
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK------GQKEFEAEAAAIGKIH--HPNLLALRAYYLGPKGEK 607 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~ 607 (773)
|.+.+.||+|+||.||+|.. .+++.||||.+...... ....+.+|+.++++++ |+||+++++++. ..+..
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~-~~~~~ 123 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE-RPDSF 123 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-CSSEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe-cCCcE
Confidence 34678999999999999985 46889999999754322 2345678999999996 599999999995 45589
Q ss_pred EEEEeecCC-CCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC-CCCCeEEeecCCccc
Q 041878 608 LLVFDFMPK-GSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD-EKTNPRIADFGLSRL 685 (773)
Q Consensus 608 ~lV~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~-~~~~~kl~DfG~a~~ 685 (773)
++|+||+.+ ++|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+||+++ +++.+||+|||+++.
T Consensus 124 ~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH-HCCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 999999976 89999998754 3789999999999999999999 99999999999999999 778999999999987
Q ss_pred cccccccceeeccCccccccccccCCCCC-CcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 686 MTAAANTNVIATAGTLGYRAPELSKLKNA-NTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 686 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
..... .....||+.|+|||++....+ +.++||||||+++|||++|+.||..
T Consensus 200 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 200 LKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred ccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 65332 223458999999998876665 6789999999999999999999975
No 286
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=289.52 Aligned_cols=280 Identities=19% Similarity=0.220 Sum_probs=203.2
Q ss_pred CCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCC
Q 041878 81 GGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIG 160 (773)
Q Consensus 81 ~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 160 (773)
|.|.|+ | ++++++++ .+|..+. ++|++|+|++|++++..+..+..+++|++|+|++|++++..|..|+
T Consensus 30 C~~~~~-c--------~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 30 CDRNGI-C--------KGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp ECTTSE-E--------ECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred CCCCeE-e--------eCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 348876 6 34556665 4565554 4899999999999987777899999999999999999988888899
Q ss_pred CCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCC-ccccCCCccceeeccccc-cccccCCcccccccCc
Q 041878 161 NCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIP-LSLTRLPSLSVLALQHNN-LSGSVPNNWGVLAGNK 238 (773)
Q Consensus 161 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~~~ 238 (773)
++++|++|+|++|.+++..+..+.++++|++|+|++|+++...+ ..+.++++|++|++++|+ +++..
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~----------- 166 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ----------- 166 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC-----------
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccC-----------
Confidence 99999999999999986555558889999999999998885433 467778888888888774 44332
Q ss_pred ccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEE
Q 041878 239 SYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLN 318 (773)
Q Consensus 239 ~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 318 (773)
+..+..+++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|+
T Consensus 167 ------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 228 (353)
T 2z80_A 167 ------------------RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLE 228 (353)
T ss_dssp ------------------TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEE
T ss_pred ------------------HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEE
Confidence 33455555666666666666655566666666666666666666533333344466666666
Q ss_pred ccCCCCCCCcchhhc---cccccccccccCccccc----ccccccCCCCcCceeecCCccCccCCCch-hhccCccCEEE
Q 041878 319 LENNRLGNKIPEGLE---RLQNLTVLNLKNNQFKG----HIPETIGNISGINQLDLSENDFTGEISPS-LASLANLTSFN 390 (773)
Q Consensus 319 Ls~N~l~~~~~~~l~---~l~~L~~L~ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~ 390 (773)
+++|++++..+..+. ....++.+++++|.+++ .+|..+..+++|++|+|++|+++ .+|.. +..+++|+.|+
T Consensus 229 L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~ 307 (353)
T 2z80_A 229 LRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIW 307 (353)
T ss_dssp EESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEE
Confidence 666666655444332 24556666666666665 47788899999999999999999 55655 58999999999
Q ss_pred eecccCCCCCch
Q 041878 391 VSYNNLSGSVPP 402 (773)
Q Consensus 391 ls~N~l~g~~p~ 402 (773)
|++|+++|.+|.
T Consensus 308 L~~N~~~~~~~~ 319 (353)
T 2z80_A 308 LHTNPWDCSCPR 319 (353)
T ss_dssp CCSSCBCCCHHH
T ss_pred eeCCCccCcCCC
Confidence 999999999874
No 287
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=8.9e-32 Score=287.12 Aligned_cols=198 Identities=26% Similarity=0.428 Sum_probs=146.4
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCc-ccHHHHHHHHH-HHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-KGQKEFEAEAA-AIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|...+.||+|+||.||+|... +|+.||||+++.... ....++..|+. +++.++||||+++++++.. .+..++||||
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~e~ 102 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICMEL 102 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEEee
Confidence 345688999999999999874 788999999976532 33445666666 7777899999999999954 4589999999
Q ss_pred cCCCCHHHHHhhc--CCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 614 MPKGSLASFLHAR--GPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 614 ~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
+++ +|.+++... .....+++..+..++.|++.||.||| +. ||+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK-ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH-HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh-ccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 975 888877642 12345889999999999999999999 77 99999999999999999999999999998664332
Q ss_pred ccceeeccCcccccccccc----CCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 691 NTNVIATAGTLGYRAPELS----KLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
. .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 181 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 181 A--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred c--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 2 2233589999999998 566789999999999999999999999975
No 288
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=292.65 Aligned_cols=198 Identities=24% Similarity=0.375 Sum_probs=161.3
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEeec
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDFM 614 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~~ 614 (773)
|.+.+.||+|+||.||+|.... .||+|+++... ....+.+.+|+.++++++|+||+++++++.. .+..++||||+
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~iv~e~~ 111 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIITSLC 111 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-SSCEEEECBCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCceEEEeecc
Confidence 3467899999999999998753 59999987542 2234567889999999999999999999954 45799999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc----
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA---- 690 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~---- 690 (773)
++++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++ ++.+||+|||++.......
T Consensus 112 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH-~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 112 KGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLH-AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp CSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHH-HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred cCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 9999999997653 34788999999999999999999 99999999999999998 6799999999987653211
Q ss_pred ccceeeccCccccccccccCC---------CCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 041878 691 NTNVIATAGTLGYRAPELSKL---------KNANTKTDVYSLGVIILELLTGKSPGEPMN 741 (773)
Q Consensus 691 ~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~ 741 (773)
........||+.|+|||.+.. ..++.++||||||+++|||++|+.||....
T Consensus 188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 247 (319)
T 2y4i_B 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247 (319)
T ss_dssp CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112223458999999998764 457889999999999999999999997644
No 289
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=8.8e-32 Score=292.73 Aligned_cols=200 Identities=22% Similarity=0.305 Sum_probs=164.6
Q ss_pred HHHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHHHccC-----------CCceEEeEEEEECC
Q 041878 536 LCATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-----------HPNLLALRAYYLGP 603 (773)
Q Consensus 536 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~~ 603 (773)
+|.+.+.||+|+||+||+|.. .+++.||||++... ......+.+|+.++++++ |+||+++++++...
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 345678999999999999986 57889999999643 234567889999999887 88999999998543
Q ss_pred C---CeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeC------CCC
Q 041878 604 K---GEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLD------EKT 673 (773)
Q Consensus 604 ~---~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~------~~~ 673 (773)
. ...++||||+ +++|.+++.... ...+++..+..++.||+.||+||| +. ||+||||||+|||++ ..+
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH-~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMH-RRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH-HTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHH-hcCCEEecCCChHHeEEeccCCCcCcc
Confidence 2 2678999999 899999998753 234889999999999999999999 76 999999999999994 444
Q ss_pred CeEEeecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC
Q 041878 674 NPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNGM 743 (773)
Q Consensus 674 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~~ 743 (773)
.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...+..
T Consensus 176 ~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 241 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241 (373)
T ss_dssp EEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC------
T ss_pred eEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccc
Confidence 79999999998664322 2346899999999999889999999999999999999999999876543
No 290
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=9.1e-32 Score=285.05 Aligned_cols=195 Identities=21% Similarity=0.392 Sum_probs=162.4
Q ss_pred HHhhcccccccceEEEEEEe-CCCCEEEEEEecccCcc------cHHHHHHHHHHHHcc----CCCceEEeEEEEECCCC
Q 041878 537 CATAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTK------GQKEFEAEAAAIGKI----HHPNLLALRAYYLGPKG 605 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~~~~~~~ 605 (773)
|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.+++++ +|+||+++++++. ..+
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~-~~~ 111 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE-TQE 111 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe-cCC
Confidence 45678999999999999986 46889999999654322 223456799999998 8999999999984 455
Q ss_pred eEEEEEee-cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeC-CCCCeEEeecCCc
Q 041878 606 EKLLVFDF-MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLD-EKTNPRIADFGLS 683 (773)
Q Consensus 606 ~~~lV~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~-~~~~~kl~DfG~a 683 (773)
..++|+|| +++++|.+++.+.. .+++..+..++.||+.||+||| +.||+||||||+||+++ .++.+||+|||++
T Consensus 112 ~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 112 GFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCH-SRGVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp -CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH-HHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred eEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH-HCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 78999999 78999999998754 3789999999999999999999 89999999999999999 7889999999999
Q ss_pred cccccccccceeeccCccccccccccCCCCCC-cchhhHHHHHHHHHHHcCCCCCCC
Q 041878 684 RLMTAAANTNVIATAGTLGYRAPELSKLKNAN-TKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 684 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
....... .....||+.|+|||++.+..+. .++||||+|+++|||++|+.||..
T Consensus 188 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 188 ALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp EECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred hhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 8765432 2234589999999988766664 589999999999999999999975
No 291
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1e-31 Score=287.76 Aligned_cols=192 Identities=19% Similarity=0.179 Sum_probs=161.0
Q ss_pred HHHHhhcccccccceEEEEEEeCCCCEEEEEEecccC--------cccHHHHHHHHHHHHccC---------CCceEEeE
Q 041878 535 LLCATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKT--------TKGQKEFEAEAAAIGKIH---------HPNLLALR 597 (773)
Q Consensus 535 l~~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l~ 597 (773)
-.|.+.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|+.++++++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4578889999999999999988 68999999997542 223478899999999886 88888887
Q ss_pred EEEEC-----------------------------CCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHH
Q 041878 598 AYYLG-----------------------------PKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGL 648 (773)
Q Consensus 598 ~~~~~-----------------------------~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al 648 (773)
+++.. ..+..++||||+++|++.+.+.+ ..+++..++.++.||+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 76531 25689999999999977766643 3378999999999999999
Q ss_pred HHhccCCCceecCCCCCCEEeCCCC--------------------CeEEeecCCccccccccccceeeccCccccccccc
Q 041878 649 NYLHVEENMIHGNLTSSNVLLDEKT--------------------NPRIADFGLSRLMTAAANTNVIATAGTLGYRAPEL 708 (773)
Q Consensus 649 ~yLH~~~~iiH~Dik~~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~ 708 (773)
+|||++.||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||+
T Consensus 175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~ 248 (336)
T 2vuw_A 175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDL 248 (336)
T ss_dssp HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGG
T ss_pred HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhh
Confidence 9999558999999999999999887 8999999999866432 2358999999999
Q ss_pred cCCCCCCcchhhHHHHHH-HHHHHcCCCCCC
Q 041878 709 SKLKNANTKTDVYSLGVI-ILELLTGKSPGE 738 (773)
Q Consensus 709 ~~~~~~~~~~Dvws~Gv~-l~el~tg~~P~~ 738 (773)
+.+.. +.++||||+|++ .+++++|..||.
T Consensus 249 ~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 249 FTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp GCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred hcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 98666 889999998777 778999999984
No 292
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=294.71 Aligned_cols=195 Identities=21% Similarity=0.358 Sum_probs=153.1
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEEEEeecC
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
|...++||+|+||+||.....+|+.||||++...... .+.+|+++++++ +||||+++++++. .....++||||++
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~E~~~ 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEK-DRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEE-ETTEEEEEEECCS
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEe-cCCEEEEEEECCC
Confidence 3456899999999976555667999999999654332 356799999999 7999999999984 4558899999996
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC-----CCCeEEeecCCcccccccc
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE-----KTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~-----~~~~kl~DfG~a~~~~~~~ 690 (773)
|+|.+++..... ......+..++.||+.||+||| +.||+||||||+||+++. ...+||+|||+++......
T Consensus 102 -g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 102 -ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp -EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHH-HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred -CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHH-HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 699999987542 1333455789999999999999 999999999999999953 2358899999998765432
Q ss_pred c--cceeeccCccccccccccC---CCCCCcchhhHHHHHHHHHHHc-CCCCCCC
Q 041878 691 N--TNVIATAGTLGYRAPELSK---LKNANTKTDVYSLGVIILELLT-GKSPGEP 739 (773)
Q Consensus 691 ~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dvws~Gv~l~el~t-g~~P~~~ 739 (773)
. .......||+.|+|||++. ...++.++||||+||++|||+| |..||..
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 2 2223456999999999987 4667889999999999999999 9999864
No 293
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=286.46 Aligned_cols=274 Identities=19% Similarity=0.203 Sum_probs=219.0
Q ss_pred CcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeeccc
Q 041878 117 LRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSY 196 (773)
Q Consensus 117 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~ 196 (773)
....++++|+++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 345788888888 5666554 5889999999999876666888899999999999998877777888888888888888
Q ss_pred ccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccC-ccCCCCCCccEEECCCC-
Q 041878 197 NSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP-VSLGKLGLLQEISLSHN- 274 (773)
Q Consensus 197 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N- 274 (773)
|++++..+..+.++++|++|+|++|++++ ..+ ..+..+++|++|++++|
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-----------------------------l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKT-----------------------------LGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSS-----------------------------SCSSCSCTTCTTCCEEEEEESS
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcc-----------------------------cCchhhhccCCCCcEEECCCCc
Confidence 88886555557777777777777777662 112 35778889999999999
Q ss_pred cccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccc
Q 041878 275 KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPE 354 (773)
Q Consensus 275 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~ 354 (773)
.+.+..+..|.++++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+.
T Consensus 161 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 240 (353)
T 2z80_A 161 TFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFS 240 (353)
T ss_dssp SCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC
T ss_pred cccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccc
Confidence 47766778899999999999999999999999999999999999999999655555566799999999999999986655
Q ss_pred ccC---CCCcCceeecCCccCcc----CCCchhhccCccCEEEeecccCCCCCchhhhc---cCCCCCCCCCCCCCCCC
Q 041878 355 TIG---NISGINQLDLSENDFTG----EISPSLASLANLTSFNVSYNNLSGSVPPLLSK---KFNSSSFVGNLQLCGYS 423 (773)
Q Consensus 355 ~~~---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---~~~~~~~~~n~~~c~~~ 423 (773)
.+. ....++.++|++|.+++ .+|..+..+++|+.|++++|+++ .+|..... .+....+.+|+..|.++
T Consensus 241 ~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 241 ELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 443 46678899999999887 47788899999999999999999 57765323 33344677888877554
No 294
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.9e-30 Score=289.62 Aligned_cols=240 Identities=20% Similarity=0.199 Sum_probs=155.6
Q ss_pred ccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCcccccc
Q 041878 106 RISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLAN 185 (773)
Q Consensus 106 ~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~ 185 (773)
.+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|.+++..+..+..
T Consensus 68 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 145 (452)
T 3zyi_A 68 EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 145 (452)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSS
T ss_pred ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcc
Confidence 3454443 57888888888888888888888888888888888888777788888888888888888888666666788
Q ss_pred ccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCC
Q 041878 186 STRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGL 265 (773)
Q Consensus 186 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~ 265 (773)
+++|++|+|++|+++...+..+.++++|++|+|++|+..+.+ .+..|..+++
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i----------------------------~~~~~~~l~~ 197 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI----------------------------SEGAFEGLFN 197 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE----------------------------CTTTTTTCTT
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcccc----------------------------ChhhccCCCC
Confidence 888888888888887666666777777777777764322222 2234556666
Q ss_pred ccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccC
Q 041878 266 LQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKN 345 (773)
Q Consensus 266 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~ 345 (773)
|+.|+|++|++++. | .+..+++|++|+|++|.+++..|..|..+++|+.|+|++|+++
T Consensus 198 L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-------------------- 255 (452)
T 3zyi_A 198 LKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS-------------------- 255 (452)
T ss_dssp CCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCC--------------------
T ss_pred CCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCc--------------------
Confidence 77777777766642 3 3455555555555555555554555555555555555554444
Q ss_pred cccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 346 NQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 346 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
+..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|+|.+.+.
T Consensus 256 ----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 256 ----LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ----EECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ----eECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 4444444555555555555555554444445555555555555555555443
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.9e-31 Score=278.59 Aligned_cols=251 Identities=23% Similarity=0.280 Sum_probs=208.3
Q ss_pred cEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCC--Cccccccccccceeecc
Q 041878 118 RKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGA--IPPSLANSTRLYRLNLS 195 (773)
Q Consensus 118 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~Ls 195 (773)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46778888877 4565443 6788888888888855445578888888888888888732 35566667777777777
Q ss_pred cccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccC-ccCCCCCCccEEECCCC
Q 041878 196 YNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP-VSLGKLGLLQEISLSHN 274 (773)
Q Consensus 196 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N 274 (773)
+|.++ .+|..+..+++|++|++++|+++ +..+ ..+..+++|++|++++|
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~-----------------------------~~~~~~~~~~l~~L~~L~l~~n 136 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLK-----------------------------QMSEFSVFLSLRNLIYLDISHT 136 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEE-----------------------------SSTTTTTTTTCTTCCEEECTTS
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCccc-----------------------------ccccchhhhhccCCCEEECCCC
Confidence 77776 34555666666666666666655 3322 46788899999999999
Q ss_pred cccCCCCCCcCcccccceeccccccccc-cCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccc
Q 041878 275 KIVGPIPDELGKLSKLQKLDLSYNAIGG-SFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIP 353 (773)
Q Consensus 275 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~ 353 (773)
++.+..+..+..+++|++|++++|.+++ ..|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++..+
T Consensus 137 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 137 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp CCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred cCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 9999899999999999999999999987 688999999999999999999999889999999999999999999998888
Q ss_pred cccCCCCcCceeecCCccCccCCCchhhccC-ccCEEEeecccCCCCCc
Q 041878 354 ETIGNISGINQLDLSENDFTGEISPSLASLA-NLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 354 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~g~~p 401 (773)
..+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|+++|.++
T Consensus 217 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 217 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred hhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 8899999999999999999999999999984 99999999999998765
No 296
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.7e-31 Score=312.76 Aligned_cols=190 Identities=20% Similarity=0.313 Sum_probs=160.7
Q ss_pred HHhhcccccccceEEEEEEeC--CCCEEEEEEecccC-cccHHHHHHHHHHHHccCCCceEEeEEEEECCCCe----EEE
Q 041878 537 CATAEIMGKSTYGTAYKATLE--DGSEVAVKRLREKT-TKGQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGE----KLL 609 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----~~l 609 (773)
|.+.++||+|+||.||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++...... .|+
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~l 161 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYI 161 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEE
Confidence 456789999999999999875 68899999986543 33456788999999999999999999999654321 699
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||+++++|.+++.. .+++.+++.++.||+.||.||| +.|||||||||+|||++.+ .+||+|||+++.....
T Consensus 162 v~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH-~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 162 VMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH-SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp EEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred EEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH-HCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 9999999999987754 3899999999999999999999 9999999999999999886 8999999999865433
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
....||+.|+|||++.+. ++.++|||||||++|||++|..||..
T Consensus 235 -----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 235 -----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp -----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred -----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence 234689999999988654 48899999999999999999999875
No 297
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=6.7e-31 Score=279.06 Aligned_cols=196 Identities=23% Similarity=0.395 Sum_probs=146.5
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc-cH-HHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEee
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK-GQ-KEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFDF 613 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e~ 613 (773)
|...+.||+|+||.||+|... +|+.||||++...... .. +.+.++..+++.++||||+++++++.. .+..++||||
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 105 (318)
T 2dyl_A 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAMEL 105 (318)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEEec
Confidence 456789999999999999875 7899999999755332 22 334455567888899999999999954 4589999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC-CceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEE-NMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
+ ++.+..+.... ...+++..+..++.||+.||.||| ++ ||+||||||+||+++.++.+||+|||++........
T Consensus 106 ~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH-~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (318)
T 2dyl_A 106 M-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLK-EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA- 180 (318)
T ss_dssp C-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred c-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH-hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-
Confidence 9 55666655543 234789999999999999999999 74 999999999999999999999999999876543322
Q ss_pred ceeeccCccccccccccC-----CCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSK-----LKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
.....+|+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 181 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 181 -KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 22345899999999884 56788999999999999999999999975
No 298
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=6.7e-30 Score=266.89 Aligned_cols=263 Identities=22% Similarity=0.230 Sum_probs=187.5
Q ss_pred ceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCC
Q 041878 85 GIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPN 164 (773)
Q Consensus 85 gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 164 (773)
+..|.....+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|+.+++
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 81 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81 (285)
T ss_dssp TCEEECSSSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CceECCCCCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccC
Confidence 34465444456777777776 345433 468999999999999888888999999999999999999888889999999
Q ss_pred CCEEEccCCC-CCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccc
Q 041878 165 LQTLDLSNNA-LIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQ 243 (773)
Q Consensus 165 L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~ 243 (773)
|++|+|++|. ++...|..+..+++|++|+|++|++++..+..+.++++|++|++++|++++..+..+..+. +|+
T Consensus 82 L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-----~L~ 156 (285)
T 1ozn_A 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG-----NLT 156 (285)
T ss_dssp CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----TCC
T ss_pred CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCC-----Ccc
Confidence 9999999997 7766688889999999999999999988888888888999999988888855544444333 667
Q ss_pred eeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCC
Q 041878 244 FLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNR 323 (773)
Q Consensus 244 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 323 (773)
+|+|++|.+++..+..+..+++|+.|+|++|++++..|..|..+++|++|++++|++++..+..+..+++|+.|++++|+
T Consensus 157 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 236 (285)
T 1ozn_A 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (285)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCC
Confidence 77777777666655566666667777777776666666666666666666666666665555556666666666666666
Q ss_pred CCCCcchhhccccccccccccCccccccccccc
Q 041878 324 LGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI 356 (773)
Q Consensus 324 l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 356 (773)
+....+.. .-...|+.+..+.+.+....|..+
T Consensus 237 ~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 237 WVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp EECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 65433221 111234444455555555555544
No 299
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=1.5e-30 Score=271.55 Aligned_cols=171 Identities=14% Similarity=0.106 Sum_probs=146.8
Q ss_pred HHhhcccccccceEEEEEEeC-CCCEEEEEEecccCcc---cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEEEe
Q 041878 537 CATAEIMGKSTYGTAYKATLE-DGSEVAVKRLREKTTK---GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLVFD 612 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV~e 612 (773)
|.+.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+..+++++||||+++++++. ..+..|+|||
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e 111 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH-TRAGGLVVAE 111 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE-ECCcEEEEEE
Confidence 455689999999999999875 5899999999765432 2467899999999999999999999995 4558999999
Q ss_pred ecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccccc
Q 041878 613 FMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANT 692 (773)
Q Consensus 613 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~ 692 (773)
|+++++|.+++++. ....++.+++.|++.||+||| +.||+||||||+|||++.++.+||+++|
T Consensus 112 ~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH-~~givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 112 WIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAH-RAGVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred ecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHH-HCCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 99999999999643 245567889999999999999 9999999999999999999999998443
Q ss_pred ceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 041878 693 NVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPMNG 742 (773)
Q Consensus 693 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~~~ 742 (773)
|++ .++.++|||||||++|||+||+.||...+.
T Consensus 175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 333 378899999999999999999999987543
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=4.3e-30 Score=273.56 Aligned_cols=286 Identities=19% Similarity=0.221 Sum_probs=182.3
Q ss_pred HHhCCCCCCCcCCCCCC-CCCCCCCCCcceEeeCCCEEEEEcCCCCcccc----cCccc--cCCCCCcEEEccCCccccc
Q 041878 58 KHDLIDPHGFLRSWNDS-GVGACSGGWAGIKCVKGQVIAIQLPWRRLGGR----ISEKI--SQLHALRKLSLHDNLLAGP 130 (773)
Q Consensus 58 k~~~~~~~~~l~sW~~~-~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~----i~~~l--~~l~~L~~L~L~~n~l~~~ 130 (773)
+.++.|+...+.+|... ..++|. |.+.-|....- .-.-+...|. ++..+ ...++++.|+|++|.++ .
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~--~~~~w~~~~~~---~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~ 95 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNR--WHSAWRQANSN---NPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-Q 95 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTT--HHHHHHHHTTT---CTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-S
T ss_pred cccCchHHHHHHHHHHhccCCchh--hhhhhcccccc---cccccccCCcchhhhHHHHhcccccceeEEEccCCCch-h
Confidence 44555666678888532 235555 87776621100 0001111111 11111 12355666666666665 4
Q ss_pred CCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCC
Q 041878 131 VPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRL 210 (773)
Q Consensus 131 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l 210 (773)
+|..+..+++|++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..+.++++|++|+|++|++.+
T Consensus 96 lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~--------- 164 (328)
T 4fcg_A 96 FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELT--------- 164 (328)
T ss_dssp CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCC---------
T ss_pred cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcc---------
Confidence 5555555566666666666555 55555555555555555555555 445555555555555555554444
Q ss_pred CccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCccccc
Q 041878 211 PSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKL 290 (773)
Q Consensus 211 ~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 290 (773)
.+|..++.. ..+..+..+++|++|+|++|+++ .+|..+..+++|
T Consensus 165 ---------------~~p~~~~~~--------------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L 208 (328)
T 4fcg_A 165 ---------------ELPEPLAST--------------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL 208 (328)
T ss_dssp ---------------CCCSCSEEE--------------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC
T ss_pred ---------------ccChhHhhc--------------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC
Confidence 444333211 01223555667777777777777 667777777888
Q ss_pred ceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCc
Q 041878 291 QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEN 370 (773)
Q Consensus 291 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 370 (773)
++|+|++|++++ +|..+..+++|++|+|++|++.+.+|..+..+++|++|++++|++.+.+|..++++++|++|+|++|
T Consensus 209 ~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 287 (328)
T 4fcg_A 209 KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC 287 (328)
T ss_dssp CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTC
T ss_pred CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCC
Confidence 888888888874 5556778888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCccCCCchhhccCccCEEEeecccCC
Q 041878 371 DFTGEISPSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 371 ~l~~~~~~~~~~l~~L~~L~ls~N~l~ 397 (773)
++.+.+|..+..+++|+.+++..|.+.
T Consensus 288 ~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 288 VNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CchhhccHHHhhccCceEEeCCHHHHH
Confidence 888888888888888888888877654
No 301
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.7e-30 Score=285.87 Aligned_cols=195 Identities=17% Similarity=0.234 Sum_probs=151.9
Q ss_pred hhcccccccceEEEEEEe-CCCCEEEEEEecccCc---ccHHHHHHHHHHHHccCC-Cce----------E-----Ee--
Q 041878 539 TAEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTT---KGQKEFEAEAAAIGKIHH-PNL----------L-----AL-- 596 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~h-~ni----------v-----~l-- 596 (773)
..++||+|+||+||+|.+ .+|+.||||+++.... ...+.+.+|+.+++.++| +|. + .+
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 467899999999999985 5799999999974322 336789999999999987 221 1 11
Q ss_pred ----EEEEECC----CCeEEEEEeecCCCCHHHHHhhc----CCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCC
Q 041878 597 ----RAYYLGP----KGEKLLVFDFMPKGSLASFLHAR----GPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664 (773)
Q Consensus 597 ----~~~~~~~----~~~~~lV~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~ 664 (773)
..+.... ....+++|+++ +++|.++++.. .....+++..++.++.||++||+||| +.||+||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~iiHrDiKp 239 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH-HYGLVHTYLRP 239 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH-HTTEECSCCCG
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCccc
Confidence 1111111 12356777766 78999988522 22345788899999999999999999 99999999999
Q ss_pred CCEEeCCCCCeEEeecCCccccccccccceeeccCcccccccccc----------CCCCCCcchhhHHHHHHHHHHHcCC
Q 041878 665 SNVLLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELS----------KLKNANTKTDVYSLGVIILELLTGK 734 (773)
Q Consensus 665 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dvws~Gv~l~el~tg~ 734 (773)
+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||+||+
T Consensus 240 ~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~ 314 (413)
T 3dzo_A 240 VDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314 (413)
T ss_dssp GGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred ceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence 9999999999999999998765433 233457 999999988 6667889999999999999999999
Q ss_pred CCCCCC
Q 041878 735 SPGEPM 740 (773)
Q Consensus 735 ~P~~~~ 740 (773)
.||...
T Consensus 315 ~Pf~~~ 320 (413)
T 3dzo_A 315 LPNTDD 320 (413)
T ss_dssp CCCCTT
T ss_pred CCCCCc
Confidence 999874
No 302
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=5.1e-29 Score=276.89 Aligned_cols=271 Identities=25% Similarity=0.366 Sum_probs=171.7
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
..++.|++++|.+++ +|+. +++|++|++++|.+++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 467778888887776 5543 3677777777777774 2221 1577888888887775 66 4777788888888
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++ +|..+ ++|++|++++|++++ +| .+.++++|++|++++|++++ +|... .+|++|++++|
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--------~~L~~L~l~~n 225 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--------LSLESIVAGNN 225 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--------TTCCEEECCSS
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--------CcccEEECcCC
Confidence 8887774 55433 477777888777775 45 47777777777777777774 33321 25777777777
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCC--Cc
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGN--KI 328 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~ 328 (773)
.++ .+| .++.+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|+.|++++|++++ ..
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~ 295 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSEL 295 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCC
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCc
Confidence 776 444 36677777777777777764 3432 2456666666666654 3322 2445555555555544 22
Q ss_pred chhhc-------------cc-cccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecc
Q 041878 329 PEGLE-------------RL-QNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYN 394 (773)
Q Consensus 329 ~~~l~-------------~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 394 (773)
|..+. .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|++++|
T Consensus 296 ~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N 367 (454)
T 1jl5_A 296 PPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYN 367 (454)
T ss_dssp CTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSS
T ss_pred CCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCC
Confidence 22111 22 467777777777774 4443 467777777777777 3554 3567777777777
Q ss_pred cCCC--CCchhh
Q 041878 395 NLSG--SVPPLL 404 (773)
Q Consensus 395 ~l~g--~~p~~~ 404 (773)
++++ .+|..+
T Consensus 368 ~l~~l~~ip~~l 379 (454)
T 1jl5_A 368 PLREFPDIPESV 379 (454)
T ss_dssp CCSSCCCCCTTC
T ss_pred CCCcCCCChHHH
Confidence 7777 566544
No 303
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=8.1e-30 Score=291.89 Aligned_cols=287 Identities=26% Similarity=0.351 Sum_probs=237.1
Q ss_pred CcCCCCCCCCCCCCCCCcce--------EeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCC
Q 041878 67 FLRSWNDSGVGACSGGWAGI--------KCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFL 138 (773)
Q Consensus 67 ~l~sW~~~~~~~c~~~w~gv--------~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 138 (773)
..++|.. +.++|. |.|. .|....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .+
T Consensus 11 ~w~~W~~-~~~~~~--~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 11 VWSAWRR-AAPAEE--SRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp HHHHHHH-TCCGGG--HHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHh-cCCcch--hccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 3466743 334444 8653 334456899999999998 7887776 89999999999999 4665 67
Q ss_pred CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeec
Q 041878 139 PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLAL 218 (773)
Q Consensus 139 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 218 (773)
++|++|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|++|+|++|++++ +|.. +++|++|+|
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~L 148 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSV 148 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEEC
Confidence 99999999999999 5665 78999999999999985 555 57889999999999985 5543 489999999
Q ss_pred cccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccc
Q 041878 219 QHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYN 298 (773)
Q Consensus 219 ~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 298 (773)
++|++++ +|.. ..+|+.|++++|.+++. | ..+++|+.|++++|++++ +|.. +++|+.|++++|
T Consensus 149 s~N~l~~-l~~~--------~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N 211 (622)
T 3g06_A 149 SDNQLAS-LPAL--------PSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNN 211 (622)
T ss_dssp CSSCCSC-CCCC--------CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred cCCcCCC-cCCc--------cCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCC
Confidence 9999985 4432 23799999999999964 4 457899999999999996 5543 478999999999
Q ss_pred cccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCc
Q 041878 299 AIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISP 378 (773)
Q Consensus 299 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 378 (773)
.++ .+|.. +++|+.|+|++|++++ +| ..+++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+ .+|.
T Consensus 212 ~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~ 278 (622)
T 3g06_A 212 RLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPE 278 (622)
T ss_dssp CCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCG
T ss_pred ccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCH
Confidence 999 45543 4899999999999987 44 56689999999999999 5665 6789999999999999 7899
Q ss_pred hhhccCccCEEEeecccCCCCCchhhh
Q 041878 379 SLASLANLTSFNVSYNNLSGSVPPLLS 405 (773)
Q Consensus 379 ~~~~l~~L~~L~ls~N~l~g~~p~~~~ 405 (773)
.+..+++|+.|+|++|++++.+|..+.
T Consensus 279 ~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 279 SLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp GGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred HHhhccccCEEEecCCCCCCcCHHHHH
Confidence 999999999999999999998887663
No 304
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=7.3e-30 Score=283.71 Aligned_cols=251 Identities=24% Similarity=0.312 Sum_probs=130.0
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCC-------------ceEEcccCccCCCCCC
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNL-------------RGVYLFNNRLSGSIPP 157 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-------------~~L~L~~n~l~~~~p~ 157 (773)
.+++.++++++++ |.+|+.++++++|++|++++|.+.|.+|..++.+++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4577788888888 7888888888888888888888888888888877653 677777777664 332
Q ss_pred CCCCCCCCCEEEccCCCCCCCCccccc----------------cc-cccceeecccccccccCCccccCCCccceeeccc
Q 041878 158 SIGNCPNLQTLDLSNNALIGAIPPSLA----------------NS-TRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQH 220 (773)
Q Consensus 158 ~l~~l~~L~~L~Ls~N~l~~~~~~~l~----------------~l-~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 220 (773)
. .++|++|+|++|.+++ +|..+. .+ ++|++|+|++|++++ +| .+.++++|++|++++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDN 162 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred C---cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCC
Confidence 1 2455555665555553 333210 11 355666666666654 44 356666666666666
Q ss_pred cccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccc
Q 041878 221 NNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI 300 (773)
Q Consensus 221 N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 300 (773)
|++++ +|..+ .+|++|++++|.+++ +| .++.+++|+.|++++|++++ +|... ++|++|++++|.+
T Consensus 163 N~l~~-lp~~~--------~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l 227 (454)
T 1jl5_A 163 NSLKK-LPDLP--------PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNIL 227 (454)
T ss_dssp SCCSC-CCCCC--------TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCC
T ss_pred CcCcc-cCCCc--------ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcC
Confidence 66653 33321 156666666666665 33 45666666666666666654 33322 3566666666666
Q ss_pred cccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCcc
Q 041878 301 GGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTG 374 (773)
Q Consensus 301 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (773)
+ .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|+.|++++|++++
T Consensus 228 ~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 228 E-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp S-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred C-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 5 444 25566666666666666654 2221 2455555555555553 3332 2455555555555554
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.2e-29 Score=278.68 Aligned_cols=251 Identities=21% Similarity=0.218 Sum_probs=178.0
Q ss_pred CcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeeccc
Q 041878 117 LRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSY 196 (773)
Q Consensus 117 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~ 196 (773)
.+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456788888887 4665553 6788888888888877778888888888888888888877677777777777777777
Q ss_pred ccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcc
Q 041878 197 NSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKI 276 (773)
Q Consensus 197 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 276 (773)
|+++...+..+.++++|++|+|++|+++. ..+..|..+++|+.|++++|+.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----------------------------~~~~~~~~l~~L~~L~l~~~~~ 183 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIES-----------------------------IPSYAFNRVPSLMRLDLGELKK 183 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCE-----------------------------ECTTTTTTCTTCCEEECCCCTT
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcce-----------------------------eCHhHHhcCCcccEEeCCCCCC
Confidence 77775555556666666666665555542 2233455566666666666322
Q ss_pred cCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccccc
Q 041878 277 VGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI 356 (773)
Q Consensus 277 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 356 (773)
.+.+ .+..|..+++|++|+|++|++++. | .+..+++|+.|+|++|++++..|..|
T Consensus 184 l~~i-----------------------~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~ 238 (452)
T 3zyi_A 184 LEYI-----------------------SEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSF 238 (452)
T ss_dssp CCEE-----------------------CTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGG
T ss_pred cccc-----------------------ChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccc
Confidence 2222 222344445555555555555432 2 35667778888888888888888999
Q ss_pred CCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhhh--ccCCCCCCCCCCCCCCCCC
Q 041878 357 GNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLLS--KKFNSSSFVGNLQLCGYSP 424 (773)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~~~~~~~~~~n~~~c~~~~ 424 (773)
.++++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..+..+. ..+....+.+|+..|++..
T Consensus 239 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 239 HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred cCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 9999999999999999999999999999999999999999976554432 2344456789999888764
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=5.1e-29 Score=276.96 Aligned_cols=252 Identities=20% Similarity=0.219 Sum_probs=188.3
Q ss_pred CCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecc
Q 041878 116 ALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLS 195 (773)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls 195 (773)
..+.++.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678888888888 5676554 688889999999988888888889999999999998887777888888888888888
Q ss_pred cccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCC-
Q 041878 196 YNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHN- 274 (773)
Q Consensus 196 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N- 274 (773)
+|+++...+..|..+++|++|+|++|+++... +..|..+++|++|+|++|
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~-----------------------------~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIP-----------------------------SYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEEC-----------------------------TTTTTTCTTCCEEECCCCT
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccC-----------------------------HHHhhhCcccCEeCCCCCC
Confidence 88888666667778888888888777776433 334455555666666653
Q ss_pred cccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccc
Q 041878 275 KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPE 354 (773)
Q Consensus 275 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~ 354 (773)
.+....+..|.++++|++|+|++|+++ .+| .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+.
T Consensus 172 ~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 249 (440)
T 3zyj_A 172 RLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERN 249 (440)
T ss_dssp TCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred CcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChh
Confidence 333233335666666666666666666 333 356667777777777777777777777777778888888888877777
Q ss_pred ccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 355 TIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 355 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
.|.++++|+.|+|++|++++..+..+..+++|+.|+|++|+|.+.+.
T Consensus 250 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 250 AFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp SSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred hhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 88888888888888888887777777888888888888888877665
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.5e-29 Score=264.15 Aligned_cols=254 Identities=26% Similarity=0.287 Sum_probs=163.1
Q ss_pred cEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccc
Q 041878 118 RKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYN 197 (773)
Q Consensus 118 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N 197 (773)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|.+++..|..+..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57788888877 445433 467888888888888766677888888888888888888776777888888888888888
Q ss_pred c-ccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcc
Q 041878 198 S-LLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKI 276 (773)
Q Consensus 198 ~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 276 (773)
. ++...+..+..+++|++|++++|++++..| ..+..+++|++|++++|++
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-----------------------------~~~~~l~~L~~L~l~~n~l 141 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGP-----------------------------GLFRGLAALQYLYLQDNAL 141 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCT-----------------------------TTTTTCTTCCEEECCSSCC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECH-----------------------------hHhhCCcCCCEEECCCCcc
Confidence 6 665556777777777777777777664444 3444555555555555555
Q ss_pred cCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccccc
Q 041878 277 VGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI 356 (773)
Q Consensus 277 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 356 (773)
++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|++++..|..+..+++|+.|++++|++++..+..+
T Consensus 142 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 221 (285)
T 1ozn_A 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL 221 (285)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHH
T ss_pred cccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHc
Confidence 54444445555555555555555554444455555666666666666655555666666666666666666665555556
Q ss_pred CCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchhh
Q 041878 357 GNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPLL 404 (773)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~ 404 (773)
..+++|+.|+|++|++....+.. .....++.+..+.|.+.|..|..+
T Consensus 222 ~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 222 APLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp TTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 66666666666666666433321 112234445566677777777654
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3e-31 Score=280.82 Aligned_cols=253 Identities=19% Similarity=0.195 Sum_probs=182.8
Q ss_pred CCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCC-CCCccccc-------cccccceeecccccccccCCccc-
Q 041878 137 FLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALI-GAIPPSLA-------NSTRLYRLNLSYNSLLGSIPLSL- 207 (773)
Q Consensus 137 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~l~-------~l~~L~~L~Ls~N~l~~~~~~~l- 207 (773)
..++|++|++++|.+ .+|..+... |++|+|++|.+. ..+|..+. ++++|++|+|++|++++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 344555555555555 444444333 555666666652 33444443 56666666666666666666654
Q ss_pred -cCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCC--CCCCc
Q 041878 208 -TRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGP--IPDEL 284 (773)
Q Consensus 208 -~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~l 284 (773)
..+++|++|+|++|++++. |..++.+.....++|++|+|++|.+++..+..|+.+++|++|+|++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 6666777777777777655 5555554222224788888888888888888888999999999999988764 23333
Q ss_pred --Ccccccceeccccccccc---cCcccccccccCceEEccCCCCCCCcc-hhhccccccccccccCcccccccccccCC
Q 041878 285 --GKLSKLQKLDLSYNAIGG---SFPVTFTNITSLVSLNLENNRLGNKIP-EGLERLQNLTVLNLKNNQFKGHIPETIGN 358 (773)
Q Consensus 285 --~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~ls~N~l~~~~~~~~~~ 358 (773)
..+++|++|+|++|++++ .....+..+++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 788899999999999983 222345677899999999999988775 45667899999999999998 7788776
Q ss_pred CCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCC
Q 041878 359 ISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGS 399 (773)
Q Consensus 359 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~ 399 (773)
++|++|+|++|++++. |. +..+++|+.|+|++|+|++.
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 8999999999999976 55 88999999999999999863
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=9.2e-29 Score=274.93 Aligned_cols=243 Identities=23% Similarity=0.265 Sum_probs=186.3
Q ss_pred CCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCC
Q 041878 99 PWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGA 178 (773)
Q Consensus 99 ~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 178 (773)
.+.+++ .+|..+. +.++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|.++..
T Consensus 51 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~ 127 (440)
T 3zyj_A 51 VRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTI 127 (440)
T ss_dssp CSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSC
T ss_pred CCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCee
Confidence 334444 4565554 6899999999999999999999999999999999999988889999999999999999999977
Q ss_pred CccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCc
Q 041878 179 IPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPV 258 (773)
Q Consensus 179 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~ 258 (773)
.+..|..+++|++|+|++|+++...+..|.++++|++|+|++|+..+.++ +.
T Consensus 128 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~----------------------------~~ 179 (440)
T 3zyj_A 128 PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS----------------------------EG 179 (440)
T ss_dssp CTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC----------------------------TT
T ss_pred CHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC----------------------------cc
Confidence 67789999999999999999998888889999999999999855433333 23
Q ss_pred cCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccc
Q 041878 259 SLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNL 338 (773)
Q Consensus 259 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 338 (773)
.|..+++|++|+|++|+++. +| .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 180 ~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 180 AFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp TTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred hhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 45555666666666666663 33 35666666666666666666666666666777777777777766666666677777
Q ss_pred ccccccCcccccccccccCCCCcCceeecCCccCcc
Q 041878 339 TVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTG 374 (773)
Q Consensus 339 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (773)
+.|+|++|++++..+..+..+++|+.|+|++|++..
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 777777777776666666777777777777777663
No 310
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=4.6e-29 Score=262.50 Aligned_cols=171 Identities=22% Similarity=0.355 Sum_probs=146.5
Q ss_pred hcccccccceEEEEEEe-CCCCEEEEEEecccCcccHHHHHHHHHHH-HccCCCceEEeEEEEEC---CCCeEEEEEeec
Q 041878 540 AEIMGKSTYGTAYKATL-EDGSEVAVKRLREKTTKGQKEFEAEAAAI-GKIHHPNLLALRAYYLG---PKGEKLLVFDFM 614 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~---~~~~~~lV~e~~ 614 (773)
.++||+|+||.||+|.. .+++.||+|+++. ...+.+|+.++ +..+||||+++++++.. .....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 37799999999999986 4789999999953 34567888888 55689999999999854 244689999999
Q ss_pred CCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCC---CCCeEEeecCCccccccccc
Q 041878 615 PKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDE---KTNPRIADFGLSRLMTAAAN 691 (773)
Q Consensus 615 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~---~~~~kl~DfG~a~~~~~~~~ 691 (773)
++|+|.+++.... ...+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||++....
T Consensus 98 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH-~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 98 DGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp CSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHH-HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 9999999998754 235899999999999999999999 999999999999999998 7889999999886432
Q ss_pred cceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 041878 692 TNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEPM 740 (773)
Q Consensus 692 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~~ 740 (773)
+..++.++||||+||++|||++|+.||...
T Consensus 172 -------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 172 -------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp -------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred -------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 234678999999999999999999999754
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=9.2e-31 Score=277.05 Aligned_cols=267 Identities=23% Similarity=0.281 Sum_probs=180.5
Q ss_pred cCCCCCCCCCCCCCCCcc--eEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCccc-ccCCCCCC-------C
Q 041878 68 LRSWNDSGVGACSGGWAG--IKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLA-GPVPWSLG-------F 137 (773)
Q Consensus 68 l~sW~~~~~~~c~~~w~g--v~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~-~~~~~~l~-------~ 137 (773)
..+|.. ...|.. +.. +.|...+++.++++++.+ .+|..+... |+.|+|++|.++ +.+|..+. +
T Consensus 21 ~~~~~~--~~~c~~-~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~ 93 (312)
T 1wwl_A 21 KPDWSS--AFNCLG-AADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLG 93 (312)
T ss_dssp SCCGGG--GGGSSS-CSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHT
T ss_pred ccchHH--Hhhhhc-cccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcC
Confidence 456743 223332 444 455556677788888888 778777655 899999999984 56676665 7
Q ss_pred CCCCceEEcccCccCCCCCCCC--CCCCCCCEEEccCCCCCCCCccccccc-----cccceeecccccccccCCccccCC
Q 041878 138 LPNLRGVYLFNNRLSGSIPPSI--GNCPNLQTLDLSNNALIGAIPPSLANS-----TRLYRLNLSYNSLLGSIPLSLTRL 210 (773)
Q Consensus 138 l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~Ls~N~l~~~~~~~l~~l 210 (773)
+++|++|+|++|++++.+|..+ +.+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..+..+.++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 8999999999999998888876 8999999999999999876 8888877 889999999999998888889999
Q ss_pred Cccceeecccccccccc--CCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCC--CC-CCcC
Q 041878 211 PSLSVLALQHNNLSGSV--PNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGP--IP-DELG 285 (773)
Q Consensus 211 ~~L~~L~L~~N~l~~~~--p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p-~~l~ 285 (773)
++|++|+|++|++.+.+ +..+ .+..+++|++|+|++|++++. ++ ..+.
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~---------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 225 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISAL---------------------------CPLKFPTLQVLALRNAGMETPSGVCSALAA 225 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHS---------------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHH
T ss_pred CCCCEEECCCCCcCcchHHHHHH---------------------------HhccCCCCCEEECCCCcCcchHHHHHHHHh
Confidence 99999999999877542 2111 113344455555555544421 11 1223
Q ss_pred cccccceeccccccccccCc-ccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCce
Q 041878 286 KLSKLQKLDLSYNAIGGSFP-VTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQ 364 (773)
Q Consensus 286 ~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 364 (773)
.+++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++
T Consensus 226 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~ 300 (312)
T 1wwl_A 226 ARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGN 300 (312)
T ss_dssp TTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEE
T ss_pred cCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCE
Confidence 34455555555555554443 33444556666666666665 4444444 5666666666666654 44 667777777
Q ss_pred eecCCccCcc
Q 041878 365 LDLSENDFTG 374 (773)
Q Consensus 365 L~L~~N~l~~ 374 (773)
|+|++|++++
T Consensus 301 L~L~~N~l~~ 310 (312)
T 1wwl_A 301 LSLKGNPFLD 310 (312)
T ss_dssp EECTTCTTTC
T ss_pred EeccCCCCCC
Confidence 7777777764
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=6.4e-31 Score=278.93 Aligned_cols=264 Identities=22% Similarity=0.230 Sum_probs=169.9
Q ss_pred cEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccc
Q 041878 118 RKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYN 197 (773)
Q Consensus 118 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N 197 (773)
+.++++.+.+.......+..+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..+ +..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344444555443333334445555666666666555555555566666666666666554332 555666666666666
Q ss_pred cccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCccc
Q 041878 198 SLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIV 277 (773)
Q Consensus 198 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 277 (773)
++++.. ..++|++|++++|++++..+.. .++|++|++++|.+++..+..++.+++|++|+|++|+++
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~--------~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 157 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCSR--------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEECC--------CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCccc--------cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC
Confidence 655321 2256666666666666444332 125777777777777666667777777777888877777
Q ss_pred CCCCCCcC-cccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccccc
Q 041878 278 GPIPDELG-KLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI 356 (773)
Q Consensus 278 ~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 356 (773)
+..+..+. .+++|++|+|++|.+++. + ....+++|++|+|++|++++.. ..+..+++|+.|++++|+++ .+|..+
T Consensus 158 ~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~ 233 (317)
T 3o53_A 158 TVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKAL 233 (317)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTC
T ss_pred cccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHh
Confidence 66555553 567788888888877754 2 2234778888888888886543 34777888888888888887 467778
Q ss_pred CCCCcCceeecCCccCc-cCCCchhhccCccCEEEee-cccCCCCC
Q 041878 357 GNISGINQLDLSENDFT-GEISPSLASLANLTSFNVS-YNNLSGSV 400 (773)
Q Consensus 357 ~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ls-~N~l~g~~ 400 (773)
..+++|+.|+|++|++. +.+|..+..+++|+.|+++ .+.++|..
T Consensus 234 ~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~ 279 (317)
T 3o53_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQN 279 (317)
T ss_dssp CCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSS
T ss_pred hcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCc
Confidence 88888888888888887 6677777788888888877 33444433
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=5.4e-30 Score=271.80 Aligned_cols=272 Identities=21% Similarity=0.203 Sum_probs=231.4
Q ss_pred eCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEE
Q 041878 89 VKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTL 168 (773)
Q Consensus 89 ~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 168 (773)
+..+....+++.+.+...+...+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 8 ~g~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L 85 (317)
T 3o53_A 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTL 85 (317)
T ss_dssp ETTEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEE
T ss_pred CcCceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEE
Confidence 34456667788888876666666778899999999999998888899999999999999999997665 9999999999
Q ss_pred EccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecc
Q 041878 169 DLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLD 248 (773)
Q Consensus 169 ~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~ 248 (773)
+|++|.+++. ...++|++|++++|++++..+. .+++|++|++++|++++..+..++.+. +|++|+|+
T Consensus 86 ~Ls~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~-----~L~~L~Ls 152 (317)
T 3o53_A 86 DLNNNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRS-----RVQYLDLK 152 (317)
T ss_dssp ECCSSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGS-----SEEEEECT
T ss_pred ECcCCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccC-----CCCEEECC
Confidence 9999999843 2448999999999999876544 367899999999999987776776554 89999999
Q ss_pred ccccccccCccCC-CCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCC
Q 041878 249 HNLIAGTIPVSLG-KLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNK 327 (773)
Q Consensus 249 ~n~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 327 (773)
+|.+++..+..+. .+++|++|+|++|++++. + ....+++|++|+|++|++++. |..+..+++|+.|+|++|+++ .
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~ 228 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-L 228 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-E
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-c
Confidence 9999998887774 789999999999999865 3 234589999999999999955 455999999999999999997 5
Q ss_pred cchhhccccccccccccCcccc-cccccccCCCCcCceeecCCc-cCccCCCch
Q 041878 328 IPEGLERLQNLTVLNLKNNQFK-GHIPETIGNISGINQLDLSEN-DFTGEISPS 379 (773)
Q Consensus 328 ~~~~l~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~ 379 (773)
+|..+..+++|+.|++++|++. +.+|..+..+++|+.|++++| .+.|..|..
T Consensus 229 l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 7888999999999999999999 888999999999999999944 577665544
No 314
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-29 Score=284.42 Aligned_cols=235 Identities=23% Similarity=0.247 Sum_probs=123.8
Q ss_pred CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeec
Q 041878 139 PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLAL 218 (773)
Q Consensus 139 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 218 (773)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 345555555555554444455555555555555555543332 4455555555555555442211 145555555
Q ss_pred cccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcC-cccccceecccc
Q 041878 219 QHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELG-KLSKLQKLDLSY 297 (773)
Q Consensus 219 ~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~ 297 (773)
++|.+++..+..+ ++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++..|..+. .+++|++|+|++
T Consensus 107 ~~N~l~~~~~~~l--------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~ 178 (487)
T 3oja_A 107 ANNNISRVSCSRG--------QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (487)
T ss_dssp CSSCCCCEEECCC--------SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred cCCcCCCCCcccc--------CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCC
Confidence 5555554333211 2455555555555555555555556666666666666655555554 455666666666
Q ss_pred ccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCc-cCC
Q 041878 298 NAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFT-GEI 376 (773)
Q Consensus 298 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~ 376 (773)
|.|++..+ +..+++|+.|+|++|++++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++. +.+
T Consensus 179 N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 179 NFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp SCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred Cccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcch
Confidence 66654422 2235566666666666654333 35556666666666666663 4555666666666666666665 444
Q ss_pred CchhhccCccCEEEee
Q 041878 377 SPSLASLANLTSFNVS 392 (773)
Q Consensus 377 ~~~~~~l~~L~~L~ls 392 (773)
|..+..++.|+.++++
T Consensus 255 ~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 255 RDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHHHHhCCCCcEEecc
Confidence 5555555555555443
No 315
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=3.4e-31 Score=296.76 Aligned_cols=307 Identities=23% Similarity=0.211 Sum_probs=141.8
Q ss_pred CEEEEEcCCCCccc----ccCccccCCCCCcEEEccCCcccccCCCCC-CCCC----CCceEEcccCccCC----CCCCC
Q 041878 92 QVIAIQLPWRRLGG----RISEKISQLHALRKLSLHDNLLAGPVPWSL-GFLP----NLRGVYLFNNRLSG----SIPPS 158 (773)
Q Consensus 92 ~v~~l~l~~~~l~~----~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l-~~l~----~L~~L~L~~n~l~~----~~p~~ 158 (773)
+++.|+|++|++++ .++..+..+++|++|+|++|.+++..+..+ ..++ +|++|+|++|+++. .++..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 34445555555543 234445555555555555555543222111 1122 45555555555552 33455
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccc-----ccccceeecccccccccC----CccccCCCccceeeccccccccccCC
Q 041878 159 IGNCPNLQTLDLSNNALIGAIPPSLAN-----STRLYRLNLSYNSLLGSI----PLSLTRLPSLSVLALQHNNLSGSVPN 229 (773)
Q Consensus 159 l~~l~~L~~L~Ls~N~l~~~~~~~l~~-----l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~p~ 229 (773)
+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++++.. +..+..+++|++|++++|.+++..+.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 555555555555555554332222221 334555555555555422 33344455555555555555433322
Q ss_pred cccccccCcccccceeeccccccccc----cCccCCCCCCccEEECCCCcccCCC-----CCCcCcccccceeccccccc
Q 041878 230 NWGVLAGNKSYQLQFLNLDHNLIAGT----IPVSLGKLGLLQEISLSHNKIVGPI-----PDELGKLSKLQKLDLSYNAI 300 (773)
Q Consensus 230 ~~~~l~~~~~~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~-----p~~l~~l~~L~~L~Ls~N~l 300 (773)
.+........++|++|++++|.+++. ++..+..+++|++|++++|++++.. +..+..+++|++|++++|.+
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l 268 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 22211101112455555555555542 2344444555555555555554321 11122344555555555555
Q ss_pred ccc----CcccccccccCceEEccCCCCCCCcchhhccc-----cccccccccCcccccc----cccccCCCCcCceeec
Q 041878 301 GGS----FPVTFTNITSLVSLNLENNRLGNKIPEGLERL-----QNLTVLNLKNNQFKGH----IPETIGNISGINQLDL 367 (773)
Q Consensus 301 ~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~L 367 (773)
++. ++..+..+++|++|++++|++++..+..+... ++|+.|++++|.+++. ++..+..+++|++|+|
T Consensus 269 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 348 (461)
T 1z7x_W 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQI 348 (461)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEc
Confidence 532 34444445555555555555544333333322 3555555555555443 3334444455555555
Q ss_pred CCccCccCCCchhhc-----cCccCEEEeecccCCC
Q 041878 368 SENDFTGEISPSLAS-----LANLTSFNVSYNNLSG 398 (773)
Q Consensus 368 ~~N~l~~~~~~~~~~-----l~~L~~L~ls~N~l~g 398 (773)
++|++++..+..+.. .++|+.|+|++|++++
T Consensus 349 s~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 349 SNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp CSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred cCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 555555443333332 3455555555555543
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.6e-28 Score=275.71 Aligned_cols=251 Identities=22% Similarity=0.217 Sum_probs=212.9
Q ss_pred CCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCC
Q 041878 100 WRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAI 179 (773)
Q Consensus 100 ~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 179 (773)
..++...+......+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++.
T Consensus 19 ~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l- 95 (487)
T 3oja_A 19 DSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL- 95 (487)
T ss_dssp TTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-
T ss_pred hhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-
Confidence 333333333333445589999999999998888899999999999999999997766 99999999999999999843
Q ss_pred ccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCcc
Q 041878 180 PPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVS 259 (773)
Q Consensus 180 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~ 259 (773)
| ..++|++|+|++|.+++..+. .+++|+.|+|++|++++..|..++.+. +|++|+|++|.+++..|..
T Consensus 96 ~----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~L~~L~Ls~N~l~~~~~~~ 163 (487)
T 3oja_A 96 L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRS-----RVQYLDLKLNEIDTVNFAE 163 (487)
T ss_dssp E----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGS-----SEEEEECTTSCCCEEEGGG
T ss_pred C----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCC-----CCCEEECCCCCCCCcChHH
Confidence 2 338999999999999976554 468899999999999988887777655 8999999999999988888
Q ss_pred CC-CCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccc
Q 041878 260 LG-KLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNL 338 (773)
Q Consensus 260 l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 338 (773)
+. .+++|+.|+|++|.+++..+ +..+++|++|+|++|.|++..| .+..+++|+.|+|++|++++ +|..+..+++|
T Consensus 164 l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L 239 (487)
T 3oja_A 164 LAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNL 239 (487)
T ss_dssp GGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTC
T ss_pred HhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCC
Confidence 86 79999999999999997632 4468999999999999997544 58999999999999999985 77789999999
Q ss_pred ccccccCcccc-cccccccCCCCcCceeecCC
Q 041878 339 TVLNLKNNQFK-GHIPETIGNISGINQLDLSE 369 (773)
Q Consensus 339 ~~L~ls~N~l~-~~~~~~~~~l~~L~~L~L~~ 369 (773)
+.|++++|.+. +.+|..+..++.|+.|+++.
T Consensus 240 ~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 240 EHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp CEEECTTCCBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred CEEEcCCCCCcCcchHHHHHhCCCCcEEeccc
Confidence 99999999998 78888899999999998863
No 317
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=1.6e-30 Score=291.31 Aligned_cols=304 Identities=20% Similarity=0.184 Sum_probs=244.2
Q ss_pred CCEEEEEcCCCCcccccCcccc-CCC----CCcEEEccCCcccc----cCCCCCCCCCCCceEEcccCccCCCCCCCC--
Q 041878 91 GQVIAIQLPWRRLGGRISEKIS-QLH----ALRKLSLHDNLLAG----PVPWSLGFLPNLRGVYLFNNRLSGSIPPSI-- 159 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~-~l~----~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l-- 159 (773)
.+++.|+|++|.+++..+..+. .++ +|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 4688999999999876554443 355 69999999999984 568889999999999999999885444333
Q ss_pred ---CCCCCCCEEEccCCCCCCCC----ccccccccccceeecccccccccCCcccc-----CCCccceeeccccccccc-
Q 041878 160 ---GNCPNLQTLDLSNNALIGAI----PPSLANSTRLYRLNLSYNSLLGSIPLSLT-----RLPSLSVLALQHNNLSGS- 226 (773)
Q Consensus 160 ---~~l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~- 226 (773)
...++|++|+|++|.+++.. +..+..+++|++|+|++|.++...+..+. ..++|++|++++|++++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 23678999999999998643 55667789999999999999865444443 367999999999999864
Q ss_pred ---cCCcccccccCcccccceeecccccccccc-----CccCCCCCCccEEECCCCcccCC----CCCCcCcccccceec
Q 041878 227 ---VPNNWGVLAGNKSYQLQFLNLDHNLIAGTI-----PVSLGKLGLLQEISLSHNKIVGP----IPDELGKLSKLQKLD 294 (773)
Q Consensus 227 ---~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~-----~~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~ 294 (773)
++..+.. +++|++|++++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|++|+
T Consensus 216 ~~~l~~~l~~-----~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 290 (461)
T 1z7x_W 216 CRDLCGIVAS-----KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELS 290 (461)
T ss_dssp HHHHHHHHHH-----CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHHh-----CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEE
Confidence 3444433 348999999999988643 33344688999999999999864 566777889999999
Q ss_pred cccccccccCccccccc-----ccCceEEccCCCCCCC----cchhhccccccccccccCcccccccccccCC-----CC
Q 041878 295 LSYNAIGGSFPVTFTNI-----TSLVSLNLENNRLGNK----IPEGLERLQNLTVLNLKNNQFKGHIPETIGN-----IS 360 (773)
Q Consensus 295 Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~ 360 (773)
|++|.+++..+..+... ++|++|++++|.+++. ++..+..+++|++|++++|++++..+..+.. .+
T Consensus 291 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 291 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 99999987655555443 6999999999999876 4666778899999999999998766655543 78
Q ss_pred cCceeecCCccCcc----CCCchhhccCccCEEEeecccCCCC
Q 041878 361 GINQLDLSENDFTG----EISPSLASLANLTSFNVSYNNLSGS 399 (773)
Q Consensus 361 ~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~ls~N~l~g~ 399 (773)
+|++|+|++|.+++ .+|..+..+++|+.|++++|++++.
T Consensus 371 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 371 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 99999999999997 7888889999999999999999864
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.1e-28 Score=280.69 Aligned_cols=185 Identities=17% Similarity=0.081 Sum_probs=128.3
Q ss_pred ccccccceEEEEEE-eCCCCEEEEEEecccC----------cccHHHHHHHHHHHHcc-CCCceEEeEEEEECCCCeEEE
Q 041878 542 IMGKSTYGTAYKAT-LEDGSEVAVKRLREKT----------TKGQKEFEAEAAAIGKI-HHPNLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 542 ~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~l 609 (773)
-.+.|++|.+..+. ..-|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++ +..+..||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-ed~~~~yL 319 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-ENAQSGWL 319 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-ECSSEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-EECCEEEE
Confidence 35667777666654 3458899999997542 12245799999999999 699999999999 55669999
Q ss_pred EEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccc
Q 041878 610 VFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAA 689 (773)
Q Consensus 610 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~ 689 (773)
||||++|++|.+++.+.++ ++.. +|+.||+.||+|+| ++|||||||||+|||+++++.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH-~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALE-KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EEECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHH-HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EEecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHH-HCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999999987653 4443 58999999999999 999999999999999999999999999999876543
Q ss_pred cccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCC
Q 041878 690 ANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736 (773)
Q Consensus 690 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P 736 (773)
.. .....+||+.|||||++.+ .+..++|+||+|++++++.++..|
T Consensus 393 ~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred Cc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 32 2234569999999999874 467789999999998887665444
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=6.5e-26 Score=234.56 Aligned_cols=217 Identities=24% Similarity=0.279 Sum_probs=150.3
Q ss_pred CCCCCCCcceEee-CCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCC
Q 041878 77 GACSGGWAGIKCV-KGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSI 155 (773)
Q Consensus 77 ~~c~~~w~gv~c~-~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 155 (773)
+.|. |.|+.|. .+.++.+++++++++ .+|..+. +.|++|+|++|++++..+..|..+++|++|+|++|+++...
T Consensus 3 ~~C~--~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 3 ALCK--KDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCBG--GGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred ccCC--CCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 4565 9998884 344566777777777 3555443 56777777777777666667777777777777777777555
Q ss_pred CCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccc
Q 041878 156 PPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLA 235 (773)
Q Consensus 156 p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 235 (773)
+..|.++++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~----------- 146 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ----------- 146 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-----------
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-----------
Confidence 555677777777777777777555555666777777777777776655555666666666666666555
Q ss_pred cCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCc
Q 041878 236 GNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLV 315 (773)
Q Consensus 236 ~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 315 (773)
+..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 147 ------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (270)
T 2o6q_A 147 ------------------SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLK 208 (270)
T ss_dssp ------------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred ------------------ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCC
Confidence 33344566677777777777777766666677777888888888887766666677788888
Q ss_pred eEEccCCCCCCC
Q 041878 316 SLNLENNRLGNK 327 (773)
Q Consensus 316 ~L~Ls~N~l~~~ 327 (773)
.|+|++|++...
T Consensus 209 ~L~l~~N~~~c~ 220 (270)
T 2o6q_A 209 MLQLQENPWDCT 220 (270)
T ss_dssp EEECCSSCBCCS
T ss_pred EEEecCCCeeCC
Confidence 888888887543
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=6.2e-26 Score=235.60 Aligned_cols=227 Identities=22% Similarity=0.231 Sum_probs=166.1
Q ss_pred eEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccc
Q 041878 143 GVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNN 222 (773)
Q Consensus 143 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 222 (773)
.++..+.+++ .+|..+. ++|++|+|++|.+++..+..+.++++|++|+|++|++++..+..+.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4555666665 5565543 467777777777776655577777777777777777776555566666666666666666
Q ss_pred cccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccc
Q 041878 223 LSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGG 302 (773)
Q Consensus 223 l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 302 (773)
+++ ..+..|..+++|++|++++|++++..+..+..+++|++|++++|.+++
T Consensus 88 l~~-----------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 88 IQS-----------------------------LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp CCE-----------------------------ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred cCc-----------------------------cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce
Confidence 653 334556666777777777777776655567777777777777777775
Q ss_pred c-CcccccccccCceEEccCCCCCCCcchhhccccccc----cccccCcccccccccccCCCCcCceeecCCccCccCCC
Q 041878 303 S-FPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLT----VLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEIS 377 (773)
Q Consensus 303 ~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~----~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 377 (773)
. +|..+..+++|++|++++|++++..+..+..+++|+ .|++++|++++..+..+ ...+|+.|+|++|++++..+
T Consensus 139 ~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~ 217 (276)
T 2z62_A 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPD 217 (276)
T ss_dssp CCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCT
T ss_pred ecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCH
Confidence 3 577777788888888888888777777777777777 78889999886555444 44589999999999997777
Q ss_pred chhhccCccCEEEeecccCCCCCch
Q 041878 378 PSLASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 378 ~~~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
..+..+++|+.|+|++|+++|.+|.
T Consensus 218 ~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 218 GIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp TTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred hHhcccccccEEEccCCcccccCCc
Confidence 7788999999999999999998873
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1e-25 Score=233.97 Aligned_cols=225 Identities=23% Similarity=0.251 Sum_probs=183.2
Q ss_pred EEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeeccccc
Q 041878 119 KLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNS 198 (773)
Q Consensus 119 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 198 (773)
.++..+.+++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..+..+.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4666666776 5676553 689999999999998877899999999999999999997777889999999999999999
Q ss_pred ccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccC
Q 041878 199 LLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVG 278 (773)
Q Consensus 199 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 278 (773)
+++..+..+.++++|++|++++|++++.. +..++.+++|++|++++|++++
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-----------------------------~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLE-----------------------------NFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCST-----------------------------TCCCTTCTTCCEEECCSSCCCC
T ss_pred cCccChhhhcCCccccEEECCCCCccccC-----------------------------chhcccCCCCCEEECcCCccce
Confidence 99888888999999999988888877432 2345666777777787777776
Q ss_pred C-CCCCcCcccccceeccccccccccCcccccccccCc----eEEccCCCCCCCcchhhccccccccccccCcccccccc
Q 041878 279 P-IPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLV----SLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIP 353 (773)
Q Consensus 279 ~-~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~ 353 (773)
. +|..+..+++|++|+|++|++++..+..+..+++|+ +|++++|++++..+..+. ..+|+.|++++|++++..+
T Consensus 139 ~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~ 217 (276)
T 2z62_A 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPD 217 (276)
T ss_dssp CCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCT
T ss_pred ecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCH
Confidence 3 577788888888888888888877777777777777 888899988765555444 3489999999999997767
Q ss_pred cccCCCCcCceeecCCccCccCC
Q 041878 354 ETIGNISGINQLDLSENDFTGEI 376 (773)
Q Consensus 354 ~~~~~l~~L~~L~L~~N~l~~~~ 376 (773)
..+..+++|+.|+|++|++++..
T Consensus 218 ~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 218 GIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp TTTTTCCSCCEEECCSSCBCCCT
T ss_pred hHhcccccccEEEccCCcccccC
Confidence 77889999999999999998654
No 322
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=4.3e-25 Score=252.78 Aligned_cols=248 Identities=25% Similarity=0.340 Sum_probs=209.6
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|++|.++ .+|. .+++|++|+|++|.|++ +|. .+++|++|+|++|++++ +|. .+++|++|+|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 47889999999998 5665 67999999999999984 665 78999999999999995 554 6789999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|++++ +|. ..++|+.|++++|
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~--------~~~~L~~L~Ls~N 191 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LPM--------LPSGLQELSVSDN 191 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--------CCTTCCEEECCSS
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Ccc--------cCCCCcEEECCCC
Confidence 9999984 6654 4899999999999985 443 35789999999999995 552 2348999999999
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcch
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPE 330 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 330 (773)
.+++. |. .+++|+.|++++|.++. +|.. +++|++|+|++|+|++ +| ..+++|+.|+|++|+|+. +|.
T Consensus 192 ~l~~l-~~---~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~ 258 (622)
T 3g06_A 192 QLASL-PT---LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM 258 (622)
T ss_dssp CCSCC-CC---CCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC
T ss_pred CCCCC-CC---ccchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc
Confidence 99963 33 24789999999999994 5543 4789999999999996 55 456899999999999985 444
Q ss_pred hhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccC
Q 041878 331 GLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLA 384 (773)
Q Consensus 331 ~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 384 (773)
.+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.+|..+..++
T Consensus 259 ---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 ---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 6789999999999999 7899999999999999999999999998888765
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=6.4e-26 Score=234.84 Aligned_cols=224 Identities=25% Similarity=0.271 Sum_probs=112.9
Q ss_pred CCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecc
Q 041878 116 ALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLS 195 (773)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls 195 (773)
.+..+++.++.+.... .+..+++|+.|++++|.++. + +.++.+++|++|+|++|.+++. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 3444555555554332 24455666666666666652 2 2356666666666666666542 355666666666666
Q ss_pred cccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCc
Q 041878 196 YNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNK 275 (773)
Q Consensus 196 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~ 275 (773)
+|++++..+..+.++++|++|+|++|++++..+..++.+. +|++|++++|.+++..+..+..+++|+.|++++|+
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-----~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 168 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLT-----NLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQ 168 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-----TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCC-----CCCEEECCCCccCccCHHHhccCccCCEEECCCCC
Confidence 6666655555556666666666666655533332222222 34444444444443334444455555555555555
Q ss_pred ccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccc
Q 041878 276 IVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPET 355 (773)
Q Consensus 276 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~ 355 (773)
+++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|..
T Consensus 169 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 169 LQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred cCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 5544444445555555555555555544444444455555555555544322 223444444444444444444
Q ss_pred cC
Q 041878 356 IG 357 (773)
Q Consensus 356 ~~ 357 (773)
++
T Consensus 242 ~~ 243 (272)
T 3rfs_A 242 AG 243 (272)
T ss_dssp TS
T ss_pred cc
Confidence 43
No 324
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=2.6e-27 Score=256.07 Aligned_cols=261 Identities=22% Similarity=0.231 Sum_probs=153.6
Q ss_pred EEcCCCCcccccCccccCCCCCcEEEccCCcccccCC----CCCCCCC-CCceEEcccCccCCCCCCCCCCC-----CCC
Q 041878 96 IQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVP----WSLGFLP-NLRGVYLFNNRLSGSIPPSIGNC-----PNL 165 (773)
Q Consensus 96 l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~----~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~L 165 (773)
.+|++++++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..++.+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3556666666666655555556666666666665444 4455555 56666666666655544444443 556
Q ss_pred CEEEccCCCCCCCCccccccc-----cccceeecccccccccCCcccc----C-CCccceeeccccccccccCCcccccc
Q 041878 166 QTLDLSNNALIGAIPPSLANS-----TRLYRLNLSYNSLLGSIPLSLT----R-LPSLSVLALQHNNLSGSVPNNWGVLA 235 (773)
Q Consensus 166 ~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~Ls~N~l~~~~~~~l~----~-l~~L~~L~L~~N~l~~~~p~~~~~l~ 235 (773)
++|+|++|.+++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~------ 156 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD------ 156 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH------
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH------
Confidence 666666666554444433322 4555555555555543333221 2 13444444444444422211
Q ss_pred cCcccccceeeccccccccccCccCCCCC-CccEEECCCCcccCCCCCCcCc----c-cccceecccccccccc----Cc
Q 041878 236 GNKSYQLQFLNLDHNLIAGTIPVSLGKLG-LLQEISLSHNKIVGPIPDELGK----L-SKLQKLDLSYNAIGGS----FP 305 (773)
Q Consensus 236 ~~~~~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~Ls~N~l~~~----~~ 305 (773)
.++..+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.|++. ++
T Consensus 157 -------------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~ 217 (362)
T 3goz_A 157 -------------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELA 217 (362)
T ss_dssp -------------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred -------------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHH
Confidence 1222333343 6777777777777655543333 3 5788888888887753 34
Q ss_pred ccccc-cccCceEEccCCCCCCCcch----hhccccccccccccCccccc-------ccccccCCCCcCceeecCCccCc
Q 041878 306 VTFTN-ITSLVSLNLENNRLGNKIPE----GLERLQNLTVLNLKNNQFKG-------HIPETIGNISGINQLDLSENDFT 373 (773)
Q Consensus 306 ~~~~~-l~~L~~L~Ls~N~l~~~~~~----~l~~l~~L~~L~ls~N~l~~-------~~~~~~~~l~~L~~L~L~~N~l~ 373 (773)
..+.. .++|++|+|++|++++..+. .+..+++|+.|++++|.+.+ .++..+..+++|+.|||++|++.
T Consensus 218 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 218 YIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 44544 35888888888888776653 34566888888888888443 23456778888888999999888
Q ss_pred cCCCchhh
Q 041878 374 GEISPSLA 381 (773)
Q Consensus 374 ~~~~~~~~ 381 (773)
+..+..+.
T Consensus 298 ~~~~~~~~ 305 (362)
T 3goz_A 298 PSHSIPIS 305 (362)
T ss_dssp GGGCHHHH
T ss_pred CcchHHHH
Confidence 76555444
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.5e-24 Score=222.61 Aligned_cols=206 Identities=24% Similarity=0.301 Sum_probs=153.2
Q ss_pred CCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccc
Q 041878 164 NLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQ 243 (773)
Q Consensus 164 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~ 243 (773)
+++++++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------- 74 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ------------------- 74 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-------------------
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-------------------
Confidence 5677888888777 4665544 46777777777777655566666666666666666665
Q ss_pred eeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCC
Q 041878 244 FLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNR 323 (773)
Q Consensus 244 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 323 (773)
...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 75 ----------~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 75 ----------TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ----------CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ----------eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 2333445666777777777777776656666777777777777777777666777777788888888888
Q ss_pred CCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 324 LGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 324 l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
+++..+..+..+++|+.|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++.+.++
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 777666667788888888888888887666778888888899999998887666678888899999999999988765
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.1e-25 Score=230.93 Aligned_cols=223 Identities=20% Similarity=0.230 Sum_probs=155.8
Q ss_pred CCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeecc
Q 041878 140 NLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQ 219 (773)
Q Consensus 140 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 219 (773)
++..+++..+.+.... .+..+++|+.|++++|.++. + ..+..+++|++|+|++|++++. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 4445555555555332 34566777777777777652 2 3466666777777777766542 244555555555555
Q ss_pred ccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceecccccc
Q 041878 220 HNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNA 299 (773)
Q Consensus 220 ~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 299 (773)
+|++ ++..+..+..+++|++|+|++|++++..+..|..+++|++|++++|+
T Consensus 94 ~n~l-----------------------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 144 (272)
T 3rfs_A 94 GNQL-----------------------------QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQ 144 (272)
T ss_dssp TSCC-----------------------------CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCcc-----------------------------CccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCc
Confidence 5554 44445556677777777777777776666667777777778887777
Q ss_pred ccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCch
Q 041878 300 IGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPS 379 (773)
Q Consensus 300 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 379 (773)
+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|+|++|++.+.
T Consensus 145 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 220 (272)
T 3rfs_A 145 LQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 220 (272)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC----
T ss_pred cCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc----
Confidence 7766666677778888888888888777777777888888888888888877777778888888888888888754
Q ss_pred hhccCccCEEEeecccCCCCCchhh
Q 041878 380 LASLANLTSFNVSYNNLSGSVPPLL 404 (773)
Q Consensus 380 ~~~l~~L~~L~ls~N~l~g~~p~~~ 404 (773)
+++|+.|+++.|.++|.+|..+
T Consensus 221 ---~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 221 ---CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp ---TTTTHHHHHHHHHTGGGBBCTT
T ss_pred ---CcHHHHHHHHHHhCCCcccCcc
Confidence 4467888888888888888765
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.7e-24 Score=226.01 Aligned_cols=136 Identities=24% Similarity=0.242 Sum_probs=85.7
Q ss_pred CCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccccccc
Q 041878 263 LGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342 (773)
Q Consensus 263 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 342 (773)
+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+..+++|+.|+
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 344455555555554 3444455555555555555555555455555666666666666666655555566666666666
Q ss_pred ccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCC
Q 041878 343 LKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSV 400 (773)
Q Consensus 343 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~ 400 (773)
|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+.+|+.|+|++|+|.+.+
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 6666666554555666777777777777777 56666667777888888888887765
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=234.73 Aligned_cols=226 Identities=20% Similarity=0.257 Sum_probs=137.8
Q ss_pred CCcEEEccCCcccccCCC---CCCCCCCCceEEcccCccCCCCCCCC--CCCCCCCEEEccCCCCCCCCc----cccccc
Q 041878 116 ALRKLSLHDNLLAGPVPW---SLGFLPNLRGVYLFNNRLSGSIPPSI--GNCPNLQTLDLSNNALIGAIP----PSLANS 186 (773)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~---~l~~l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~~----~~l~~l 186 (773)
.++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ +.+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467777777766531100 11234668888888888888888877 788888888888888886544 334567
Q ss_pred cccceeecccccccccCCccccCCCccceeeccccccccc--cCCcccccccCcccccceeeccccccccccCccCCCCC
Q 041878 187 TRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGS--VPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLG 264 (773)
Q Consensus 187 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~ 264 (773)
++|++|+|++|++++..+..+..+++|++|+|++|++.+. ++. +..+..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---------------------------~~~~~~l~ 197 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMA---------------------------ALCPHKFP 197 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHT---------------------------TSCTTSSC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhH---------------------------HHhhhcCC
Confidence 8888888888888877777888888888888888887542 111 11123344
Q ss_pred CccEEECCCCcccCCCCC----CcCcccccceeccccccccccCccccccc---ccCceEEccCCCCCCCcchhhccccc
Q 041878 265 LLQEISLSHNKIVGPIPD----ELGKLSKLQKLDLSYNAIGGSFPVTFTNI---TSLVSLNLENNRLGNKIPEGLERLQN 337 (773)
Q Consensus 265 ~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~l~~l~~ 337 (773)
+|++|+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++
T Consensus 198 ~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 198 AIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp CCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred CCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 44444444444431 111 12344455555555555554444444443 45566666666655 3444442 56
Q ss_pred cccccccCcccccccccccCCCCcCceeecCCccCcc
Q 041878 338 LTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTG 374 (773)
Q Consensus 338 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (773)
|+.|+|++|++++. |. +..+++|+.|+|++|+++.
T Consensus 274 L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 274 LRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 66666666666643 22 4566777777777777763
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.5e-24 Score=224.73 Aligned_cols=116 Identities=26% Similarity=0.209 Sum_probs=75.9
Q ss_pred ccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccc
Q 041878 258 VSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQN 337 (773)
Q Consensus 258 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 337 (773)
..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+++...+..+..+++
T Consensus 94 ~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 173 (290)
T 1p9a_G 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLEN 173 (290)
T ss_dssp CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTT
T ss_pred hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCC
Confidence 34445555566666666665554555666666666666666666555555666666666666666666555555666777
Q ss_pred cccccccCcccccccccccCCCCcCceeecCCccCcc
Q 041878 338 LTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTG 374 (773)
Q Consensus 338 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (773)
|+.|+|++|+++ .+|..+..+++|+.|+|++|++..
T Consensus 174 L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 174 LDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 777777777776 667777777788888888888764
No 330
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=9.5e-26 Score=255.18 Aligned_cols=184 Identities=16% Similarity=0.230 Sum_probs=143.9
Q ss_pred hhcccccccceEEEEEEeCCCCEEEEEEecccCcc--------cHHHHHHHHHHHHccCCCceEEeEEEEECCCCeEEEE
Q 041878 539 TAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTK--------GQKEFEAEAAAIGKIHHPNLLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~lV 610 (773)
..++||+|+||.||+|.. .++.+|+|+....... ..+++.+|++++++++||||+++..++. ..+..++|
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-~~~~~~lV 417 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV-DLDNKRIM 417 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE-ETTTTEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE-eCCccEEE
Confidence 357899999999999954 4788999987543211 1345899999999999999995555553 33467999
Q ss_pred EeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCcccccccc
Q 041878 611 FDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAA 690 (773)
Q Consensus 611 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~ 690 (773)
|||+++++|.++++. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH-~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH-KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH-HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH-HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 4578999999999999 999999999999999999 99999999999875543
Q ss_pred ccc------eeeccCccccccccccCC--CCCCcchhhHHHHHHHHHHHcCCCCCC
Q 041878 691 NTN------VIATAGTLGYRAPELSKL--KNANTKTDVYSLGVIILELLTGKSPGE 738 (773)
Q Consensus 691 ~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws~Gv~l~el~tg~~P~~ 738 (773)
... .....||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221 124469999999999876 667888999999999999888887764
No 331
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=4e-27 Score=257.12 Aligned_cols=257 Identities=19% Similarity=0.255 Sum_probs=122.7
Q ss_pred cCccccCCCCCcEEEccCCccccc----CCCCCCCCCCCceEEcccC---ccCCCCCCCC-------CCCCCCCEEEccC
Q 041878 107 ISEKISQLHALRKLSLHDNLLAGP----VPWSLGFLPNLRGVYLFNN---RLSGSIPPSI-------GNCPNLQTLDLSN 172 (773)
Q Consensus 107 i~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~Ls~ 172 (773)
++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 445555666666666666666543 2333555666666666654 3333444333 4555555555555
Q ss_pred CCCCC----CCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecc
Q 041878 173 NALIG----AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLD 248 (773)
Q Consensus 173 N~l~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~ 248 (773)
|.+++ .+|..+..+++|++|+|++|.+++..+..+... |.. +..|++++.. ++|++|+|+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~--l~~~~~~~~~------------~~L~~L~L~ 167 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQE--LAVNKKAKNA------------PPLRSIICG 167 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHH--HHHHHHHHTC------------CCCCEEECC
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHH--HhhhhhcccC------------CCCcEEECC
Confidence 55554 234444455555555555555442222211110 000 0000000000 133333333
Q ss_pred ccccc-cccC---ccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccc---cCcccccccccCceEEccC
Q 041878 249 HNLIA-GTIP---VSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGG---SFPVTFTNITSLVSLNLEN 321 (773)
Q Consensus 249 ~n~l~-~~~~---~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~ 321 (773)
+|.++ +..+ ..+..+++|++|+|++|+++.. | ..+..+..+++|+.|+|++
T Consensus 168 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~----------------------g~~~l~~~~l~~~~~L~~L~Ls~ 225 (386)
T 2ca6_A 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE----------------------GIEHLLLEGLAYCQELKVLDLQD 225 (386)
T ss_dssp SSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH----------------------HHHHHHHTTGGGCTTCCEEECCS
T ss_pred CCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh----------------------HHHHHHHHHhhcCCCccEEECcC
Confidence 33333 1111 2333344455555555544410 1 1222444445555555555
Q ss_pred CCCC----CCcchhhccccccccccccCcccccc----ccccc--CCCCcCceeecCCccCcc----CCCchh-hccCcc
Q 041878 322 NRLG----NKIPEGLERLQNLTVLNLKNNQFKGH----IPETI--GNISGINQLDLSENDFTG----EISPSL-ASLANL 386 (773)
Q Consensus 322 N~l~----~~~~~~l~~l~~L~~L~ls~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L 386 (773)
|.++ ..+|..+..+++|+.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|
T Consensus 226 n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L 305 (386)
T 2ca6_A 226 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL 305 (386)
T ss_dssp SCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTC
T ss_pred CCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCc
Confidence 5543 33444455555555555555555543 34444 336666667777766665 355555 446777
Q ss_pred CEEEeecccCCCCCc
Q 041878 387 TSFNVSYNNLSGSVP 401 (773)
Q Consensus 387 ~~L~ls~N~l~g~~p 401 (773)
+.|+|++|++++..|
T Consensus 306 ~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 306 LFLELNGNRFSEEDD 320 (386)
T ss_dssp CEEECTTSBSCTTSH
T ss_pred eEEEccCCcCCcchh
Confidence 777777777776664
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.3e-26 Score=248.04 Aligned_cols=232 Identities=19% Similarity=0.186 Sum_probs=149.0
Q ss_pred CCcceEeeCCCEEEEEcCCCCcccccCccccCC--CCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCC-CCCC
Q 041878 82 GWAGIKCVKGQVIAIQLPWRRLGGRISEKISQL--HALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGS-IPPS 158 (773)
Q Consensus 82 ~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~p~~ 158 (773)
.|.++.|+...++.++++++.+. +..+..+ +.++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~ 113 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGI 113 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHH
T ss_pred HHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHH
Confidence 39888887666788999988776 4556666 8899999999998877665 55788899999998888765 7777
Q ss_pred CCCCCCCCEEEccCCCCCCCCccccccccccceeecccc-ccccc-CCccccCCCccceeecccc-ccccc-cCCccccc
Q 041878 159 IGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYN-SLLGS-IPLSLTRLPSLSVLALQHN-NLSGS-VPNNWGVL 234 (773)
Q Consensus 159 l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N-~l~~~-~~~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l 234 (773)
+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..
T Consensus 114 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~- 192 (336)
T 2ast_B 114 LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAH- 192 (336)
T ss_dssp HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHH-
T ss_pred HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHh-
Confidence 888888888888888888777778888888888888888 57652 5666777788888888888 77643 2222221
Q ss_pred ccCccc-ccceeecccc--ccc-cccCccCCCCCCccEEECCCCc-ccCCCCCCcCcccccceecccccc-ccccCcccc
Q 041878 235 AGNKSY-QLQFLNLDHN--LIA-GTIPVSLGKLGLLQEISLSHNK-IVGPIPDELGKLSKLQKLDLSYNA-IGGSFPVTF 308 (773)
Q Consensus 235 ~~~~~~-~L~~L~L~~n--~l~-~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~~ 308 (773)
++ +|++|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|. ++......+
T Consensus 193 ----l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 193 ----VSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp ----SCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred ----cccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 22 4555555555 233 2333344444555555555554 333334444444444444444442 221111233
Q ss_pred cccccCceEEccCC
Q 041878 309 TNITSLVSLNLENN 322 (773)
Q Consensus 309 ~~l~~L~~L~Ls~N 322 (773)
..+++|+.|++++|
T Consensus 269 ~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 269 GEIPTLKTLQVFGI 282 (336)
T ss_dssp GGCTTCCEEECTTS
T ss_pred hcCCCCCEEeccCc
Confidence 44444444444444
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=2.7e-26 Score=248.07 Aligned_cols=261 Identities=18% Similarity=0.152 Sum_probs=170.8
Q ss_pred EEccCCcccccCCCCCCCCCCCceEEcccCccCCCCC----CCCCCCC-CCCEEEccCCCCCCCCccccccc-----ccc
Q 041878 120 LSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIP----PSIGNCP-NLQTLDLSNNALIGAIPPSLANS-----TRL 189 (773)
Q Consensus 120 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~~~~l~~l-----~~L 189 (773)
+.|+.|+++|.+|..+...++|++|+|++|++++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4556666666666555555556666666666664444 4455555 56666666666655555555443 555
Q ss_pred ceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCcc----CCC-CC
Q 041878 190 YRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVS----LGK-LG 264 (773)
Q Consensus 190 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~----l~~-l~ 264 (773)
++|+|++|++++..+..+. .......++|++|+|++|.+++..+.. +.. .+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~------------------------~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 138 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELV------------------------KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPA 138 (362)
T ss_dssp CEEECCSSCGGGSCHHHHH------------------------HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCT
T ss_pred cEEECcCCcCChHHHHHHH------------------------HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCC
Confidence 5555555555544433222 211000024445555555544433332 333 25
Q ss_pred CccEEECCCCcccCCCCC----CcCccc-ccceeccccccccccCcccccc----c-ccCceEEccCCCCCCCc----ch
Q 041878 265 LLQEISLSHNKIVGPIPD----ELGKLS-KLQKLDLSYNAIGGSFPVTFTN----I-TSLVSLNLENNRLGNKI----PE 330 (773)
Q Consensus 265 ~L~~L~L~~N~l~~~~p~----~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~----~~ 330 (773)
+|++|+|++|++++..+. .+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|++++.. +.
T Consensus 139 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 899999999998864433 334454 9999999999999877765554 4 69999999999998753 44
Q ss_pred hhcc-ccccccccccCcccccccc----cccCCCCcCceeecCCccCccCCCc-------hhhccCccCEEEeecccCCC
Q 041878 331 GLER-LQNLTVLNLKNNQFKGHIP----ETIGNISGINQLDLSENDFTGEISP-------SLASLANLTSFNVSYNNLSG 398 (773)
Q Consensus 331 ~l~~-l~~L~~L~ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~L~ls~N~l~g 398 (773)
.+.. .++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.+..+. .+..+++|+.||+++|++.+
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 5555 4599999999999997554 4467889999999999996654433 45677889999999999987
Q ss_pred CCchhh
Q 041878 399 SVPPLL 404 (773)
Q Consensus 399 ~~p~~~ 404 (773)
..+..+
T Consensus 299 ~~~~~~ 304 (362)
T 3goz_A 299 SHSIPI 304 (362)
T ss_dssp GGCHHH
T ss_pred cchHHH
Confidence 755443
No 334
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.6e-26 Score=252.25 Aligned_cols=239 Identities=20% Similarity=0.279 Sum_probs=154.4
Q ss_pred cCCCCCCCCCCCceEEcccCccCCC----CCCCCCCCCCCCEEEccCCC---CCCCCcccc-------ccccccceeecc
Q 041878 130 PVPWSLGFLPNLRGVYLFNNRLSGS----IPPSIGNCPNLQTLDLSNNA---LIGAIPPSL-------ANSTRLYRLNLS 195 (773)
Q Consensus 130 ~~~~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~---l~~~~~~~l-------~~l~~L~~L~Ls 195 (773)
.++..+..+++|++|+|++|++++. ++..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3455566667777777777776654 23335566777777776643 333444433 344555555555
Q ss_pred cccccc----cCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEEC
Q 041878 196 YNSLLG----SIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISL 271 (773)
Q Consensus 196 ~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 271 (773)
+|.+++ .++..+..+++|++|+|++|.+++..+..+.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~--------------------------------------- 143 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA--------------------------------------- 143 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHH---------------------------------------
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHH---------------------------------------
Confidence 555543 2333444444444444444444322221111
Q ss_pred CCCcccCCCCCCcCcc---------cccceecccccccc-ccCc---ccccccccCceEEccCCCCCC-----Ccchhhc
Q 041878 272 SHNKIVGPIPDELGKL---------SKLQKLDLSYNAIG-GSFP---VTFTNITSLVSLNLENNRLGN-----KIPEGLE 333 (773)
Q Consensus 272 ~~N~l~~~~p~~l~~l---------~~L~~L~Ls~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~l~ 333 (773)
..+..+ ++|++|+|++|+++ +.++ ..+..+++|++|+|++|+++. ..+..+.
T Consensus 144 ----------~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~ 213 (386)
T 2ca6_A 144 ----------RALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA 213 (386)
T ss_dssp ----------HHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGG
T ss_pred ----------HHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhh
Confidence 111111 56777777777776 3334 467788999999999999973 3444888
Q ss_pred cccccccccccCcccc----cccccccCCCCcCceeecCCccCccC----CCchhhc--cCccCEEEeecccCCC----C
Q 041878 334 RLQNLTVLNLKNNQFK----GHIPETIGNISGINQLDLSENDFTGE----ISPSLAS--LANLTSFNVSYNNLSG----S 399 (773)
Q Consensus 334 ~l~~L~~L~ls~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~--l~~L~~L~ls~N~l~g----~ 399 (773)
.+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ++..+.. +++|+.|+|++|++++ .
T Consensus 214 ~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~ 293 (386)
T 2ca6_A 214 YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 293 (386)
T ss_dssp GCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHH
T ss_pred cCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHH
Confidence 9999999999999997 67888999999999999999999976 5566643 8999999999999998 4
Q ss_pred Cchhhhcc---CCCCCCCCCC
Q 041878 400 VPPLLSKK---FNSSSFVGNL 417 (773)
Q Consensus 400 ~p~~~~~~---~~~~~~~~n~ 417 (773)
+|..+... +....+.+|.
T Consensus 294 l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 294 LKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHHHHHHHCTTCCEEECTTSB
T ss_pred HHHHHHhcCCCceEEEccCCc
Confidence 77765333 3333444553
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2e-23 Score=213.34 Aligned_cols=182 Identities=21% Similarity=0.238 Sum_probs=156.0
Q ss_pred ccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccc
Q 041878 212 SLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQ 291 (773)
Q Consensus 212 ~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 291 (773)
+.++++++++.++ .+|..+. .+|+.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~-------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 86 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP-------ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC-------TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred CCeEEecCCCCcc-ccCCCCC-------CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCC
Confidence 4556666666666 4454332 2678888888888888888888999999999999999988888889999999
Q ss_pred eeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCcc
Q 041878 292 KLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEND 371 (773)
Q Consensus 292 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 371 (773)
+|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+
T Consensus 87 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 99999999998888888999999999999999988888888999999999999999997777789999999999999999
Q ss_pred CccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 372 FTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 372 l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
+++..+..+..+++|+.|+|++|+|+|..+
T Consensus 167 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 167 LQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 998888889999999999999999998743
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.6e-23 Score=212.32 Aligned_cols=196 Identities=18% Similarity=0.175 Sum_probs=129.4
Q ss_pred CCcEEEccCCcccccCCCCCCCCCCCceEEcccCc-cCCCCCCCCCCCCCCCEEEccC-CCCCCCCccccccccccceee
Q 041878 116 ALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNR-LSGSIPPSIGNCPNLQTLDLSN-NALIGAIPPSLANSTRLYRLN 193 (773)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~ 193 (773)
+|++|+|++|++++..+..|..+++|++|+|++|+ ++...+..|.++++|++|+|++ |.+++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78888888888887777778888888888888886 7755556778888888888887 788766666777778888888
Q ss_pred cccccccccCCccccCCCccc---eeecccc-ccccccCCcccccccCcccccceeeccccccccccCccCCCCCCcc-E
Q 041878 194 LSYNSLLGSIPLSLTRLPSLS---VLALQHN-NLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQ-E 268 (773)
Q Consensus 194 Ls~N~l~~~~~~~l~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~-~ 268 (773)
|++|++++ +|. +..+++|+ +|++++| +++ +..+..|..+++|+ .
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-----------------------------~i~~~~~~~l~~L~~~ 160 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-----------------------------SIPVNAFQGLCNETLT 160 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-----------------------------EECTTTTTTTBSSEEE
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchh-----------------------------hcCcccccchhcceeE
Confidence 88887775 444 55555555 5555555 554 34444555566666 6
Q ss_pred EECCCCcccCCCCCCcCcccccceecccccc-ccccCccccccc-ccCceEEccCCCCCCCcchhhccccccccccccCc
Q 041878 269 ISLSHNKIVGPIPDELGKLSKLQKLDLSYNA-IGGSFPVTFTNI-TSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346 (773)
Q Consensus 269 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N 346 (773)
|++++|+++. +|......++|++|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 161 L~l~~n~l~~-i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 161 LKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp EECCSCCCCE-ECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred EEcCCCCCcc-cCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 6666666663 33322222566666666663 665555566666 6666666666666543333 4556666666654
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.6e-24 Score=224.18 Aligned_cols=205 Identities=20% Similarity=0.179 Sum_probs=154.2
Q ss_pred cccceeecccccccccCCccc--cCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCC
Q 041878 187 TRLYRLNLSYNSLLGSIPLSL--TRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLG 264 (773)
Q Consensus 187 ~~L~~L~Ls~N~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~ 264 (773)
++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+. +.......+++|++|+|++|.+++..+..++.++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~-~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSW-LAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSS-HHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhh-hHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 445555555555555555554 5555555556665555543331 1111111234788888888888878888899999
Q ss_pred CccEEECCCCcccCC----CCCCcCcccccceeccccccccccCcc----cccccccCceEEccCCCCCCCcchhhccc-
Q 041878 265 LLQEISLSHNKIVGP----IPDELGKLSKLQKLDLSYNAIGGSFPV----TFTNITSLVSLNLENNRLGNKIPEGLERL- 335 (773)
Q Consensus 265 ~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l- 335 (773)
+|++|+|++|++.+. .+..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998652 23445789999999999999973 333 35788999999999999999988888777
Q ss_pred --cccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCC
Q 041878 336 --QNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSG 398 (773)
Q Consensus 336 --~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g 398 (773)
++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|+|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 7787775 8999999999999964 33 6788999999999999974
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=2e-25 Score=238.80 Aligned_cols=253 Identities=19% Similarity=0.210 Sum_probs=177.4
Q ss_pred CCcEEEccCCcccccCCCCCCCC--CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCC-Ccccccccccccee
Q 041878 116 ALRKLSLHDNLLAGPVPWSLGFL--PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGA-IPPSLANSTRLYRL 192 (773)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L 192 (773)
.++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +.++++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4678888887776 3445555 7788888888888766554 55678888888888877654 66667777788888
Q ss_pred ecccccccccCCccccCCCccceeecccc-ccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEEC
Q 041878 193 NLSYNSLLGSIPLSLTRLPSLSVLALQHN-NLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISL 271 (773)
Q Consensus 193 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 271 (773)
+|++|++++..+..+..+++|++|+|++| .+++. .++..+..+++|++|++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~----------------------------~l~~~~~~~~~L~~L~l 175 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF----------------------------ALQTLLSSCSRLDELNL 175 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH----------------------------HHHHHHHHCTTCCEEEC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH----------------------------HHHHHHhcCCCCCEEcC
Confidence 88887777666777777777777777777 45532 12233445566677777
Q ss_pred CCC-cccCC-CCCCcCccc-ccceeccccc--ccc-ccCcccccccccCceEEccCCC-CCCCcchhhcccccccccccc
Q 041878 272 SHN-KIVGP-IPDELGKLS-KLQKLDLSYN--AIG-GSFPVTFTNITSLVSLNLENNR-LGNKIPEGLERLQNLTVLNLK 344 (773)
Q Consensus 272 ~~N-~l~~~-~p~~l~~l~-~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~ls 344 (773)
++| .+++. ++..+..++ +|++|++++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|+++
T Consensus 176 ~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~ 255 (336)
T 2ast_B 176 SWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS 255 (336)
T ss_dssp CCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred CCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCC
Confidence 776 66543 445566666 7777777777 444 3556667778888888888888 777777788888888888888
Q ss_pred Ccc-cccccccccCCCCcCceeecCCccCccCCCchhhcc-CccCEEEeecccCCCCCchhh
Q 041878 345 NNQ-FKGHIPETIGNISGINQLDLSENDFTGEISPSLASL-ANLTSFNVSYNNLSGSVPPLL 404 (773)
Q Consensus 345 ~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~ls~N~l~g~~p~~~ 404 (773)
+|. +.......++++++|+.|+|++| ++.. .+..+ ..|..|++++|++++..|+..
T Consensus 256 ~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 256 RCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred CCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcc
Confidence 884 33333346778899999999988 4432 33333 347777899999999888765
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.6e-23 Score=212.45 Aligned_cols=198 Identities=18% Similarity=0.230 Sum_probs=165.6
Q ss_pred CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCC-CCCCCccccccccccceeeccc-ccccccCCccccCCCcccee
Q 041878 139 PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNA-LIGAIPPSLANSTRLYRLNLSY-NSLLGSIPLSLTRLPSLSVL 216 (773)
Q Consensus 139 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L 216 (773)
++|++|+|++|++++..+..|+++++|++|+|++|. ++...+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 489999999999997777789999999999999997 8766666888999999999998 89987777788888888888
Q ss_pred eccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCcc---EEECCCC-cccCCCCCCcCcccccc-
Q 041878 217 ALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQ---EISLSHN-KIVGPIPDELGKLSKLQ- 291 (773)
Q Consensus 217 ~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~- 291 (773)
++++|++++ +| . +..+++|+ +|++++| ++++..+..|..+++|+
T Consensus 111 ~l~~n~l~~-lp-----------------------------~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 111 GIFNTGLKM-FP-----------------------------D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL 159 (239)
T ss_dssp EEEEECCCS-CC-----------------------------C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEE
T ss_pred eCCCCCCcc-cc-----------------------------c-cccccccccccEEECCCCcchhhcCcccccchhccee
Confidence 888888763 33 2 44555565 9999999 99987778899999999
Q ss_pred eeccccccccccCcccccccccCceEEccCCC-CCCCcchhhccc-cccccccccCcccccccccccCCCCcCceeecCC
Q 041878 292 KLDLSYNAIGGSFPVTFTNITSLVSLNLENNR-LGNKIPEGLERL-QNLTVLNLKNNQFKGHIPETIGNISGINQLDLSE 369 (773)
Q Consensus 292 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 369 (773)
+|++++|+++...+..+.. ++|+.|++++|+ +++..+..+..+ ++|+.|++++|++++ +|.. .+++|+.|++++
T Consensus 160 ~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 160 TLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp EEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred EEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 9999999999444445555 899999999995 987778889999 999999999999995 4544 678999999988
Q ss_pred cc
Q 041878 370 ND 371 (773)
Q Consensus 370 N~ 371 (773)
+.
T Consensus 236 ~~ 237 (239)
T 2xwt_C 236 TW 237 (239)
T ss_dssp C-
T ss_pred cc
Confidence 74
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4.6e-23 Score=210.66 Aligned_cols=188 Identities=24% Similarity=0.246 Sum_probs=90.1
Q ss_pred CcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCC
Q 041878 83 WAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNC 162 (773)
Q Consensus 83 w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 162 (773)
|.|++|..+ .+.+++++++++ .+|..+. +.|+.|+|++|.+++..+..+..+++|++|+|++|++++..|..|..+
T Consensus 7 ~~gC~C~~~-~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 82 (251)
T 3m19_A 7 VTGCTCNEG-KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL 82 (251)
T ss_dssp HHSSEEEGG-GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred CCceEcCCC-CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccC
Confidence 899999521 123555555554 3333332 344455555555544444444444444444444444444444444444
Q ss_pred CCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCccccc
Q 041878 163 PNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQL 242 (773)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L 242 (773)
++|++|+|++| ++++..+..+..+++|++|+|++|++++..
T Consensus 83 ~~L~~L~L~~n------------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------- 123 (251)
T 3m19_A 83 TELGTLGLANN------------------------QLASLPLGVFDHLTQLDKLYLGGNQLKSLP--------------- 123 (251)
T ss_dssp TTCCEEECTTS------------------------CCCCCCTTTTTTCTTCCEEECCSSCCCCCC---------------
T ss_pred CcCCEEECCCC------------------------cccccChhHhcccCCCCEEEcCCCcCCCcC---------------
Confidence 44444444444 444333344444444444444444443221
Q ss_pred ceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCC
Q 041878 243 QFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENN 322 (773)
Q Consensus 243 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 322 (773)
+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|
T Consensus 124 --------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 189 (251)
T 3m19_A 124 --------------SGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189 (251)
T ss_dssp --------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred --------------hhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCC
Confidence 222333444444444444444433334455555555555555555444445555555555555555
Q ss_pred CCCCC
Q 041878 323 RLGNK 327 (773)
Q Consensus 323 ~l~~~ 327 (773)
+++..
T Consensus 190 ~~~c~ 194 (251)
T 3m19_A 190 QFDCS 194 (251)
T ss_dssp CBCTT
T ss_pred ceeCC
Confidence 55443
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=1.4e-23 Score=237.16 Aligned_cols=211 Identities=24% Similarity=0.354 Sum_probs=130.0
Q ss_pred cCCCCCCCCCCCCC---CCcce-EeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCce
Q 041878 68 LRSWNDSGVGACSG---GWAGI-KCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRG 143 (773)
Q Consensus 68 l~sW~~~~~~~c~~---~w~gv-~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 143 (773)
+.+|.. +.++|.. .|.|+ .|..++++.|+|+++++++ +|+.+. ++|++|+|++|+|+ .+| ..+++|++
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 456744 4566743 38898 7876677777777777776 666553 67777777777777 455 44667777
Q ss_pred EEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeecccccc
Q 041878 144 VYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNL 223 (773)
Q Consensus 144 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l 223 (773)
|+|++|+|++ +|. +.+ +|++|+|++|.|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|++
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 7777777775 555 544 67777777777764 444 45666666666666664 333 344555555555555
Q ss_pred ccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCccccc-------ceeccc
Q 041878 224 SGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKL-------QKLDLS 296 (773)
Q Consensus 224 ~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-------~~L~Ls 296 (773)
++ +| . |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|+
T Consensus 173 ~~-lp-----------------------------~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls 215 (571)
T 3cvr_A 173 TF-LP-----------------------------E-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCR 215 (571)
T ss_dssp SC-CC-----------------------------C-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECC
T ss_pred CC-cc-----------------------------h-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecC
Confidence 43 33 2 33 55666666666665 3444 433 44 667777
Q ss_pred cccccccCcccccccccCceEEccCCCCCCCcchhhcccc
Q 041878 297 YNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQ 336 (773)
Q Consensus 297 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 336 (773)
+|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+.
T Consensus 216 ~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 216 ENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp SSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred CCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 77666 4566666667777777777777666666665543
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.2e-22 Score=218.20 Aligned_cols=247 Identities=19% Similarity=0.137 Sum_probs=159.9
Q ss_pred CCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCC-
Q 041878 79 CSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPP- 157 (773)
Q Consensus 79 c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~- 157 (773)
|.|.|..|.|+.. +++ .||..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|.
T Consensus 7 C~C~~~~v~C~~~----------~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 7 CHCSNRVFLCQES----------KVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp SEEETTEEEEEST----------TCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred cEeeCCEEEecCC----------CCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 5555777888643 344 455544 25789999999999976667889999999999999998766654
Q ss_pred CCCCCCCCCE-EEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccc-cccccccCCcccccc
Q 041878 158 SIGNCPNLQT-LDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQH-NNLSGSVPNNWGVLA 235 (773)
Q Consensus 158 ~l~~l~~L~~-L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 235 (773)
.|.++++|++ +++++|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 5788888775 66677888877788888899999999999998876666677777777888765 455543333333322
Q ss_pred cCcccccceeeccccccccccCccCCCCCCccEEECCC-CcccCCCCCCcCcccccceeccccccccccCcccccccccC
Q 041878 236 GNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSH-NKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSL 314 (773)
Q Consensus 236 ~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 314 (773)
..++.|+|++|+|+.+.+.. ....+|++|++++ |.++...++.|..+++|++|||++|+|+...+..+. +|
T Consensus 154 ----~~l~~L~L~~N~i~~i~~~~-f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L 225 (350)
T 4ay9_X 154 ----FESVILWLNKNGIQEIHNSA-FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NL 225 (350)
T ss_dssp ----SSCEEEECCSSCCCEECTTS-STTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TC
T ss_pred ----hhhhhhccccccccCCChhh-ccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cc
Confidence 24666777777776443333 3445666666664 444433334566666677777777666644333333 34
Q ss_pred ceEEccCCCCCCCcchhhccccccccccccCcc
Q 041878 315 VSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQ 347 (773)
Q Consensus 315 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~ 347 (773)
+.|.+.++.--..+| .+..+++|+.++++++.
T Consensus 226 ~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 226 KKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred hHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 444433333223334 25556666666665544
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=8.4e-23 Score=215.24 Aligned_cols=195 Identities=26% Similarity=0.410 Sum_probs=126.3
Q ss_pred ccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccc
Q 041878 111 ISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLY 190 (773)
Q Consensus 111 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 190 (773)
+.++++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++ + +.+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCC
Confidence 3467778888888888774 34 57778888888888888875444 7888888888888888774 3 3577788888
Q ss_pred eeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEE
Q 041878 191 RLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEIS 270 (773)
Q Consensus 191 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 270 (773)
+|+|++|++++. + .+..+++|++|++++|++++..+ +.. +++|++|+|++|.+++..+ +..+++|+.|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~-----l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 179 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAG-----LTNLQYLSIGNAQVSDLTP--LANLSKLTTLK 179 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGG-----CTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccC-----CCCccEEEccCCcCCCChh--hcCCCCCCEEE
Confidence 888888887753 3 26777777777777777764322 222 2256666666666654333 55666666666
Q ss_pred CCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCC
Q 041878 271 LSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGN 326 (773)
Q Consensus 271 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 326 (773)
+++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 180 l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 180 ADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 66666654322 5555566666666666654332 5555556666666655543
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=2.7e-22 Score=215.51 Aligned_cols=216 Identities=20% Similarity=0.186 Sum_probs=149.4
Q ss_pred cEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCc-cccccccccce-eecc
Q 041878 118 RKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIP-PSLANSTRLYR-LNLS 195 (773)
Q Consensus 118 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~-L~Ls 195 (773)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+..|+++++|++|+|++|.+.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 46788888888 677766 4689999999999996555679999999999999999876655 46788888775 5677
Q ss_pred cccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccc-cccccccCccCCCCC-CccEEECCC
Q 041878 196 YNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDH-NLIAGTIPVSLGKLG-LLQEISLSH 273 (773)
Q Consensus 196 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~-n~l~~~~~~~l~~l~-~L~~L~L~~ 273 (773)
+|+++...|..|.++++|++|++++|+++...+..+.. ..++..|++.+ |.++...+..|..+. .++.|+|++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~-----~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH-----SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCC-----BSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcc-----cchhhhhhhccccccccccccchhhcchhhhhhcccc
Confidence 89999888889999999999999999998554433322 22566777754 456655555666654 567777777
Q ss_pred CcccCCCCCCcCcccccceecccc-ccccccCcccccccccCceEEccCCCCCCCcchhhcccccccccc
Q 041878 274 NKIVGPIPDELGKLSKLQKLDLSY-NAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342 (773)
Q Consensus 274 N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 342 (773)
|+|+. +|.......+|++|++++ |.++...+..|..+++|+.|+|++|+|+...+..+.++++|+.++
T Consensus 164 N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~ 232 (350)
T 4ay9_X 164 NGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 232 (350)
T ss_dssp SCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTT
T ss_pred ccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhcc
Confidence 77764 333334445677777654 455533334566666666666666666554444444444444433
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1e-22 Score=214.64 Aligned_cols=208 Identities=24% Similarity=0.360 Sum_probs=106.0
Q ss_pred EEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccc
Q 041878 120 LSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSL 199 (773)
Q Consensus 120 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 199 (773)
+.+..+.+++.+ .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++. +. +..+++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcC
Confidence 344444444322 23345666666666666663 33 456666666666666666532 22 55556666666665555
Q ss_pred cccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCC
Q 041878 200 LGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGP 279 (773)
Q Consensus 200 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 279 (773)
++. ..+..+++|++|+|++|+++ +.. .+..+++|++|++++|++++.
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~-----------------------------~~~--~l~~l~~L~~L~l~~n~l~~~ 144 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQIT-----------------------------DVT--PLAGLSNLQVLYLDLNQITNI 144 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCC-----------------------------CCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCc--hhhcCCCCCCEEECCCCCCC-----------------------------Cch--hhcCCCCCCEEECCCCccCcC
Confidence 431 12334444444444444333 211 144555666666666665543
Q ss_pred CCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCC
Q 041878 280 IPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNI 359 (773)
Q Consensus 280 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l 359 (773)
.+ +..+++|++|+|++|+++ +..+ +..+++|+.|++++|++++..+ +..+
T Consensus 145 ~~--l~~l~~L~~L~l~~n~l~------------------------~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l 194 (308)
T 1h6u_A 145 SP--LAGLTNLQYLSIGNAQVS------------------------DLTP--LANLSKLTTLKADDNKISDISP--LASL 194 (308)
T ss_dssp GG--GGGCTTCCEEECCSSCCC------------------------CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred cc--ccCCCCccEEEccCCcCC------------------------CChh--hcCCCCCCEEECCCCccCcChh--hcCC
Confidence 22 445555555555555554 3222 4444445555555555443322 4555
Q ss_pred CcCceeecCCccCccCCCchhhccCccCEEEeecccCCC
Q 041878 360 SGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSG 398 (773)
Q Consensus 360 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g 398 (773)
++|++|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 195 ~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 195 PNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 566666666666654332 5556666666666666654
No 346
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.87 E-value=3.4e-24 Score=247.73 Aligned_cols=305 Identities=14% Similarity=0.085 Sum_probs=194.3
Q ss_pred CCEEEEEcCCCCcccc----cCccccCCCCCcEEEccCCccc----ccCCCCCCCCCCCceEEcccCccCC---------
Q 041878 91 GQVIAIQLPWRRLGGR----ISEKISQLHALRKLSLHDNLLA----GPVPWSLGFLPNLRGVYLFNNRLSG--------- 153 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~----i~~~l~~l~~L~~L~L~~n~l~----~~~~~~l~~l~~L~~L~L~~n~l~~--------- 153 (773)
..++.|+|++|.+++. ++..+..+++|++|+|++|.++ +.++..+..+++|++|+|++|.+.+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~ 243 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAA 243 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCT
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhh
Confidence 3566677777766544 3334455666667777666665 2333344556666666666666553
Q ss_pred -----------------CCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCC-ccccCCCccce
Q 041878 154 -----------------SIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIP-LSLTRLPSLSV 215 (773)
Q Consensus 154 -----------------~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~ 215 (773)
..+..+..+++|+.|+++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|++
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~ 322 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEV 322 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCE
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCE
Confidence 2223344455555555555432 2455666667777777777777654333 33567777777
Q ss_pred eeccccccccccCCcccccccCcccccceeecc-----------ccccccccCcc-CCCCCCccEEECCCCcccCCCCCC
Q 041878 216 LALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLD-----------HNLIAGTIPVS-LGKLGLLQEISLSHNKIVGPIPDE 283 (773)
Q Consensus 216 L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~-----------~n~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~ 283 (773)
|+++ |.+.......+. ..+++|++|+++ .|.+++..... ...+++|++|+++.|++++..+..
T Consensus 323 L~L~-~~~~~~~l~~~~----~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 323 LETR-NVIGDRGLEVLA----QYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp EEEE-GGGHHHHHHHHH----HHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred Eecc-CccCHHHHHHHH----HhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 7777 333322211111 123368888888 35665432222 345778888888888887665555
Q ss_pred cCc-ccccceeccc----ccccccc-----CcccccccccCceEEccCC--CCCCCcchhhcc-ccccccccccCccccc
Q 041878 284 LGK-LSKLQKLDLS----YNAIGGS-----FPVTFTNITSLVSLNLENN--RLGNKIPEGLER-LQNLTVLNLKNNQFKG 350 (773)
Q Consensus 284 l~~-l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~l~~-l~~L~~L~ls~N~l~~ 350 (773)
+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++| .+++..+..+.. +++|++|++++|++++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 554 7788888886 6677753 3444667888888888754 366666666554 7889999999998886
Q ss_pred -ccccccCCCCcCceeecCCccCccCC-CchhhccCccCEEEeecccCCCCCc
Q 041878 351 -HIPETIGNISGINQLDLSENDFTGEI-SPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 351 -~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
.++..+..+++|++|+|++|.+++.. +..+..+++|+.|+|++|++++.-.
T Consensus 478 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~ 530 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQ 530 (592)
T ss_dssp HHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCT
T ss_pred HHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHH
Confidence 34555678888999999999887553 3444568889999999999876533
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=4.5e-22 Score=197.10 Aligned_cols=201 Identities=22% Similarity=0.187 Sum_probs=157.6
Q ss_pred CCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCC
Q 041878 77 GACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIP 156 (773)
Q Consensus 77 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 156 (773)
+.|.|.|.+|.|.... ++ .+|..+ .++|++|+|++|.+++..+..+..+++|++|+|++|++++..+
T Consensus 3 ~~C~C~~~~v~c~~~~----------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG----------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp TTCEEETTEEECCSSC----------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEECCCEEEecCCC----------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 3566669999996432 22 233333 3588999999999997777778899999999999999997767
Q ss_pred CCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCccccccc
Q 041878 157 PSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAG 236 (773)
Q Consensus 157 ~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 236 (773)
..|..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+..+.
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~- 148 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT- 148 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT-
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCC-
Confidence 7788999999999999999876666788899999999999999977777788999999999999999866555555444
Q ss_pred CcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcc
Q 041878 237 NKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPV 306 (773)
Q Consensus 237 ~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 306 (773)
+|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++. ++..|...+..+.
T Consensus 149 ----~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~~~~~ 203 (208)
T 2o6s_A 149 ----SLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP----DSAKCSGSGKPVR 203 (208)
T ss_dssp ----TCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT----TCSBBTTTCCBGG
T ss_pred ----CccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC----CccccccCCCcce
Confidence 89999999997764 4567899999999999999988887755 5555555444443
No 348
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=6.3e-23 Score=212.66 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=113.7
Q ss_pred hhcccccccceEEEEEEeCCCCEEEEEEecccCc------------------ccHHHHHHHHHHHHccCCCceEEeEEEE
Q 041878 539 TAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT------------------KGQKEFEAEAAAIGKIHHPNLLALRAYY 600 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~l~~~~ 600 (773)
+.+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 4589999999999999987799999999964321 12456899999999999 4 5555555
Q ss_pred ECCCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeec
Q 041878 601 LGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADF 680 (773)
Q Consensus 601 ~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~Df 680 (773)
.. +..++||||+++|+|.+ +.. .....++.||+.|+.||| +.||+||||||+|||++ ++.+||+||
T Consensus 171 ~~--~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH-~~giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 171 AW--EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY-HRGIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp EE--ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH-HTTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred ec--cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH-HCCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 22 35699999999999988 422 123469999999999999 99999999999999999 999999999
Q ss_pred CCccccccccccceeeccCccccccccccC
Q 041878 681 GLSRLMTAAANTNVIATAGTLGYRAPELSK 710 (773)
Q Consensus 681 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~ 710 (773)
|+|+. +..++|||.+.
T Consensus 237 G~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 237 PQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp TTCEE--------------TTSTTHHHHHH
T ss_pred CCCeE--------------CCCCCHHHHHH
Confidence 99863 34578899764
No 349
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.86 E-value=3.7e-24 Score=247.48 Aligned_cols=306 Identities=10% Similarity=0.077 Sum_probs=207.4
Q ss_pred CEEEEEcCCCC-ccc-ccCccccCCCCCcEEEccCCccccc----CCCCCCCCCCCceEEcccCccCC----CCCCCCCC
Q 041878 92 QVIAIQLPWRR-LGG-RISEKISQLHALRKLSLHDNLLAGP----VPWSLGFLPNLRGVYLFNNRLSG----SIPPSIGN 161 (773)
Q Consensus 92 ~v~~l~l~~~~-l~~-~i~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~----~~p~~l~~ 161 (773)
+++.|+|+++. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48899998876 221 2334445889999999999998765 33445678999999999999983 34455678
Q ss_pred CCCCCEEEccCCCCCCCCccccccccccceeeccccccc--------------------------ccCCccccCCCccce
Q 041878 162 CPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLL--------------------------GSIPLSLTRLPSLSV 215 (773)
Q Consensus 162 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~--------------------------~~~~~~l~~l~~L~~ 215 (773)
+++|++|+|++|.+.+ +|..+.++++|++|+++.+... ..+|..+..+++|++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRK 297 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCE
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcE
Confidence 9999999999999874 6677777788888887643221 233444555666666
Q ss_pred eeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCC-----------CcccCC-CCCC
Q 041878 216 LALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSH-----------NKIVGP-IPDE 283 (773)
Q Consensus 216 L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-----------N~l~~~-~p~~ 283 (773)
|+|++|.+++.....+ ...+++|++|+++++-..+.++..+..+++|++|+|++ |.+++. ++..
T Consensus 298 L~Ls~~~l~~~~~~~~----~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l 373 (592)
T 3ogk_B 298 LDLLYALLETEDHCTL----IQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIAL 373 (592)
T ss_dssp EEETTCCCCHHHHHHH----HTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHH
T ss_pred EecCCCcCCHHHHHHH----HHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHH
Confidence 6666666543322110 01233666666663322223333334567777777773 455432 1222
Q ss_pred cCcccccceeccccccccccCcccccc-cccCceEEcc----CCCCCCC-----cchhhccccccccccccCcc--cccc
Q 041878 284 LGKLSKLQKLDLSYNAIGGSFPVTFTN-ITSLVSLNLE----NNRLGNK-----IPEGLERLQNLTVLNLKNNQ--FKGH 351 (773)
Q Consensus 284 l~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~l~~l~~L~~L~ls~N~--l~~~ 351 (773)
+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++.
T Consensus 374 ~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~ 453 (592)
T 3ogk_B 374 AQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDL 453 (592)
T ss_dssp HHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHH
T ss_pred HhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHH
Confidence 344678888888888888766666665 7888888886 6777764 44456678889999987543 6666
Q ss_pred cccccC-CCCcCceeecCCccCccC-CCchhhccCccCEEEeecccCCCCCch
Q 041878 352 IPETIG-NISGINQLDLSENDFTGE-ISPSLASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 352 ~~~~~~-~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
.+..++ .+++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++....
T Consensus 454 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 454 GLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 555554 378899999999998863 445567789999999999998755333
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.5e-21 Score=220.75 Aligned_cols=95 Identities=24% Similarity=0.357 Sum_probs=47.4
Q ss_pred CCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccccccc
Q 041878 263 LGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342 (773)
Q Consensus 263 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 342 (773)
+++|+.|+|++|++++ +|. |. ++|++|+|++|+|+ .+|. +.. +| ....+.|+.|+
T Consensus 159 l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~ 213 (571)
T 3cvr_A 159 PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFR 213 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEE
T ss_pred CCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEe
Confidence 4556666666666664 444 43 55666666666665 3333 322 33 00011125555
Q ss_pred ccCcccccccccccCCCCcCceeecCCccCccCCCchhhcc
Q 041878 343 LKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASL 383 (773)
Q Consensus 343 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 383 (773)
|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 214 Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 214 CRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 5555555 345555555556666666666655555555544
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=9.1e-21 Score=187.65 Aligned_cols=179 Identities=22% Similarity=0.137 Sum_probs=125.2
Q ss_pred cEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccc
Q 041878 118 RKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYN 197 (773)
Q Consensus 118 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N 197 (773)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|.+++..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46778888877 455444 468999999999999777777889999999999999998666666788999999999999
Q ss_pred cccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCccc
Q 041878 198 SLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIV 277 (773)
Q Consensus 198 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 277 (773)
++++..+..+.++++|++|+|++|++++..+..+..+. +|++|+|++|.+++..+..+..+++|+.|++++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLT-----QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCC-----cCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 99877677778888888888888888755444343332 5666666666666555555555666666666666554
Q ss_pred CCCCCCcCcccccceeccccccccccCccccccc
Q 041878 278 GPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNI 311 (773)
Q Consensus 278 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 311 (773)
+. +++|++|+++.|+++|.+|..++.+
T Consensus 162 ~~-------~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 162 CT-------CPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CC-------TTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred cC-------CCCHHHHHHHHHhCCceeeccCccc
Confidence 32 2345555555555555555554443
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=4.9e-22 Score=233.04 Aligned_cols=229 Identities=22% Similarity=0.206 Sum_probs=99.2
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcCCCCCCCCCCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccC
Q 041878 46 VTQADYQSLRAIKHDLID-PHGFLRSWNDSGVGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHD 124 (773)
Q Consensus 46 ~~~~~~~~L~~~k~~~~~-~~~~l~sW~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~ 124 (773)
....++++|.++..+... ......+|.......+. |.++.++.++++.++|.++.+... +. ..|+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGT--ATNSAVSTPLTPKIELFANGKDEA-NQ-----ALLQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCcccc--CCCceecCCccceEEeeCCCCCcc-hh-----hHhhcCccCc
Confidence 456788999999887642 22334566442233333 999999888999999988887752 32 2345566666
Q ss_pred CcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCC
Q 041878 125 NLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIP 204 (773)
Q Consensus 125 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 204 (773)
|.|.+ ++++.|++. ..|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|
T Consensus 201 ~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp 263 (727)
T 4b8c_D 201 YSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELP 263 (727)
T ss_dssp ------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCC
T ss_pred ccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccC
Confidence 65552 344455555 55666667777777777777766 56666666777777777777776 666
Q ss_pred ccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCc
Q 041878 205 LSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDEL 284 (773)
Q Consensus 205 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l 284 (773)
..+.++++|++|+|++|+|+ .+|..++.+. +|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+
T Consensus 264 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~-----~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 264 AEIKNLSNLRVLDLSHNRLT-SLPAELGSCF-----QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp GGGGGGTTCCEEECTTSCCS-SCCSSGGGGT-----TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred hhhhCCCCCCEEeCcCCcCC-ccChhhcCCC-----CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 66666777777777777766 5555554433 4555555555554 445556666667777777777766666555
Q ss_pred Ccccc-cceeccccccccccCcc
Q 041878 285 GKLSK-LQKLDLSYNAIGGSFPV 306 (773)
Q Consensus 285 ~~l~~-L~~L~Ls~N~l~~~~~~ 306 (773)
..+.. +..|+|++|.+++.+|.
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCCC
T ss_pred hhcchhhhHHhhccCcccCcCcc
Confidence 44322 23456666666666554
No 353
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.84 E-value=7.1e-23 Score=232.81 Aligned_cols=204 Identities=20% Similarity=0.216 Sum_probs=165.5
Q ss_pred CCCCCCCEEEccCCCCCCCCccccccccccceeeccccc-------------ccccCCccccCCCccceee-cccccccc
Q 041878 160 GNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNS-------------LLGSIPLSLTRLPSLSVLA-LQHNNLSG 225 (773)
Q Consensus 160 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~-------------l~~~~~~~l~~l~~L~~L~-L~~N~l~~ 225 (773)
..+++|+.|+|++|.++ .+|..++++++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56777888888888876 677788888888888876664 5566777888888888888 7777664
Q ss_pred ccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCc
Q 041878 226 SVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFP 305 (773)
Q Consensus 226 ~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 305 (773)
.|..+.+.+|.++...+. .|+.|+|++|++++ +|. |+.+++|+.|+|++|+|+ .+|
T Consensus 424 ---------------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp 479 (567)
T 1dce_A 424 ---------------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALP 479 (567)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCC
T ss_pred ---------------hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccc
Confidence 577788888888765432 48899999999986 676 899999999999999998 778
Q ss_pred ccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccc-ccccCCCCcCceeecCCccCccCCCch---hh
Q 041878 306 VTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHI-PETIGNISGINQLDLSENDFTGEISPS---LA 381 (773)
Q Consensus 306 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~ 381 (773)
..++.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++..|.. +.
T Consensus 480 ~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 557 (567)
T 1dce_A 480 PALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAE 557 (567)
T ss_dssp GGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHH
T ss_pred hhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHH
Confidence 899999999999999999987 56 7889999999999999999876 889999999999999999998765532 34
Q ss_pred ccCccCEEEe
Q 041878 382 SLANLTSFNV 391 (773)
Q Consensus 382 ~l~~L~~L~l 391 (773)
.+++|+.|++
T Consensus 558 ~lp~L~~L~l 567 (567)
T 1dce_A 558 MLPSVSSILT 567 (567)
T ss_dssp HCTTCSEEEC
T ss_pred HCcccCccCC
Confidence 4788888864
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=2.3e-20 Score=186.31 Aligned_cols=157 Identities=20% Similarity=0.259 Sum_probs=127.9
Q ss_pred ceeeccccccccccCccCCCCCCccEEECCCCcccCCCC-CCcCcccccceeccccccccccCcccccccccCceEEccC
Q 041878 243 QFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIP-DELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLEN 321 (773)
Q Consensus 243 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 321 (773)
+.+++++|.++. +|..+. ..+++|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 456666666653 344332 345788888888876644 4577888888888888888877777888888888888888
Q ss_pred CCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 322 NRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 322 N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
|++++..+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|+|+|.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88888888888888899999999999998888889999999999999999998889999999999999999999998887
Q ss_pred h
Q 041878 402 P 402 (773)
Q Consensus 402 ~ 402 (773)
-
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 4
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3.6e-20 Score=184.82 Aligned_cols=156 Identities=23% Similarity=0.312 Sum_probs=110.4
Q ss_pred ceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCC
Q 041878 243 QFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENN 322 (773)
Q Consensus 243 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 322 (773)
+.+++++|+++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 344555555552 233332 45667777777776655556667777777777777777666777777777777777777
Q ss_pred CCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 323 RLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 323 ~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
+|+...+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|.+.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 7766656666777777777777777777777778888888888888888887777778888888888888888877665
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.2e-22 Score=231.00 Aligned_cols=204 Identities=22% Similarity=0.222 Sum_probs=175.7
Q ss_pred CCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCC-------------CCCCCccccccccccceee-cccccccc
Q 041878 136 GFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNA-------------LIGAIPPSLANSTRLYRLN-LSYNSLLG 201 (773)
Q Consensus 136 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-------------l~~~~~~~l~~l~~L~~L~-Ls~N~l~~ 201 (773)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56788888888888887 788888888888888887765 5667788899999999999 7887653
Q ss_pred cCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCC
Q 041878 202 SIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIP 281 (773)
Q Consensus 202 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 281 (773)
+|+.+.+++|.++...+. .|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|
T Consensus 424 ----------~L~~l~l~~n~i~~l~~~-----------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp 479 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEYA-----------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALP 479 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHHT-----------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCC
T ss_pred ----------hhhhhhhhcccccccCcc-----------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccc
Confidence 677888999998843321 58999999999997 465 999999999999999999 789
Q ss_pred CCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCc-chhhccccccccccccCcccccccccc---cC
Q 041878 282 DELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKI-PEGLERLQNLTVLNLKNNQFKGHIPET---IG 357 (773)
Q Consensus 282 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~ls~N~l~~~~~~~---~~ 357 (773)
..|+.+++|++|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++..|.. +.
T Consensus 480 ~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 557 (567)
T 1dce_A 480 PALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAE 557 (567)
T ss_dssp GGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHH
T ss_pred hhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHH
Confidence 999999999999999999996 66 8999999999999999999987 999999999999999999999765532 23
Q ss_pred CCCcCceeec
Q 041878 358 NISGINQLDL 367 (773)
Q Consensus 358 ~l~~L~~L~L 367 (773)
.+++|+.|++
T Consensus 558 ~lp~L~~L~l 567 (567)
T 1dce_A 558 MLPSVSSILT 567 (567)
T ss_dssp HCTTCSEEEC
T ss_pred HCcccCccCC
Confidence 4889999875
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.5e-20 Score=215.04 Aligned_cols=172 Identities=29% Similarity=0.419 Sum_probs=81.2
Q ss_pred cCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccce
Q 041878 112 SQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYR 191 (773)
Q Consensus 112 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 191 (773)
.+|++|+.|+|++|.+.. ++ .+..+++|++|+|++|+|++..| +..+++|++|+|++|.+++ + +.+..+++|++
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-L-SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-C-hhhccCCCCCE
Confidence 445555555555555542 22 35555555555555555554333 5555555555555555543 2 24455555555
Q ss_pred eecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEEC
Q 041878 192 LNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISL 271 (773)
Q Consensus 192 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 271 (773)
|+|++|++++. ..+..+++|+.|+|++|+++ +. ..+..+++|+.|+|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~-----------------------------~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKIT-----------------------------DI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCC-----------------------------CC--GGGGSCTTCSEEEC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccC-----------------------------Cc--hhhcccCCCCEEEC
Confidence 55555555431 23444444444444444444 22 23444444444444
Q ss_pred CCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCC
Q 041878 272 SHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGN 326 (773)
Q Consensus 272 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 326 (773)
++|++++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++++
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 4444443333 44444444444444444432 134444444444444444443
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=9.8e-20 Score=208.22 Aligned_cols=169 Identities=27% Similarity=0.333 Sum_probs=129.4
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEc
Q 041878 91 GQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDL 170 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 170 (773)
.+++.|+|+++.+.. ++ .+..+++|+.|+|++|.|++..+ +..+++|++|+|++|+|++ +| .+..+++|++|+|
T Consensus 43 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 467789999998875 33 68999999999999999997655 9999999999999999995 33 7999999999999
Q ss_pred cCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeecccc
Q 041878 171 SNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHN 250 (773)
Q Consensus 171 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n 250 (773)
++|.+++ + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..| +.. +++|+.|+|++|
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~-----l~~L~~L~Ls~N 185 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAG-----LTKLQNLYLSKN 185 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTT-----CTTCCEEECCSS
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hcc-----CCCCCEEECcCC
Confidence 9999985 3 5689999999999999999865 677888888888888888875443 222 224555555555
Q ss_pred ccccccCccCCCCCCccEEECCCCcccC
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVG 278 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 278 (773)
.|++. ..+..+++|+.|+|++|++.+
T Consensus 186 ~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 186 HISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55543 234445555555555555543
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.9e-20 Score=198.68 Aligned_cols=180 Identities=24% Similarity=0.255 Sum_probs=135.9
Q ss_pred ceeeccccccccccCCcccccccCcccccceeeccccccccccCccCC-CCCCccEEECCCCcccCCCCCCcCcccccce
Q 041878 214 SVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLG-KLGLLQEISLSHNKIVGPIPDELGKLSKLQK 292 (773)
Q Consensus 214 ~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 292 (773)
+.+++++|+++ .+|..+. ..++.|+|++|.|++..+..+. .+++|+.|+|++|+|++..+..|..+++|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~-------~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 92 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP-------SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRY 92 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC-------TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CEEEeCCCCcC-ccCccCC-------CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCE
Confidence 34555555555 3443322 1466677777777766666676 7788888888888888777777888888888
Q ss_pred eccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCccccccccccc---CCCCcCceeecCC
Q 041878 293 LDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETI---GNISGINQLDLSE 369 (773)
Q Consensus 293 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~---~~l~~L~~L~L~~ 369 (773)
|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++
T Consensus 93 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 93 LDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCS
T ss_pred EECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCC
Confidence 8888888887777778888888888888888887778888888888888888888886544444 5789999999999
Q ss_pred ccCccCCCchhhccCc--cCEEEeecccCCCCCc
Q 041878 370 NDFTGEISPSLASLAN--LTSFNVSYNNLSGSVP 401 (773)
Q Consensus 370 N~l~~~~~~~~~~l~~--L~~L~ls~N~l~g~~p 401 (773)
|+|++..+..+..++. |+.|+|++|+|.+.+.
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999766677888877 4889999999988764
No 360
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.81 E-value=2e-22 Score=233.01 Aligned_cols=303 Identities=16% Similarity=0.118 Sum_probs=166.3
Q ss_pred CCEEEEEcCCCCcccccCcccc-CCCCCcEEEccCC-ccccc-CCCCCCCCCCCceEEcccCccCCCCCCCC----CCCC
Q 041878 91 GQVIAIQLPWRRLGGRISEKIS-QLHALRKLSLHDN-LLAGP-VPWSLGFLPNLRGVYLFNNRLSGSIPPSI----GNCP 163 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~~i~~~l~-~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~p~~l----~~l~ 163 (773)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 5788999999998887777776 6899999999998 56543 44445578999999999999886554444 3677
Q ss_pred CCCEEEccCCC--CCCC-Cccccccccccceeecccc-cccccCCccccCCCccceeeccccc-------cc--------
Q 041878 164 NLQTLDLSNNA--LIGA-IPPSLANSTRLYRLNLSYN-SLLGSIPLSLTRLPSLSVLALQHNN-------LS-------- 224 (773)
Q Consensus 164 ~L~~L~Ls~N~--l~~~-~~~~l~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~L~~N~-------l~-------- 224 (773)
+|++|+|++|. +... ++..+..+++|++|+|++| .+. .++..+..+++|++|+++.+. +.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 99999999887 2211 1112245688999999888 333 255555556666666544331 00
Q ss_pred -----------cccCCcccccccCcccccceeeccccccccccC-ccCCCCCCccEEECCCCcccCC-CCCCcCc-----
Q 041878 225 -----------GSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP-VSLGKLGLLQEISLSHNKIVGP-IPDELGK----- 286 (773)
Q Consensus 225 -----------~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~-~p~~l~~----- 286 (773)
......+.... ..+++|++|+|++|.+++... ..+..+++|+.|++++| +.+. ++.....
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~-~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVY-SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGH-HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred CCCcccccCCcccchhhHHHHH-HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 00000010000 023366666666666554322 22345556666666655 2211 1111112
Q ss_pred -----------------------------ccccceeccccccccccCccccc-ccccCceEEcc--C----CCCCCCc--
Q 041878 287 -----------------------------LSKLQKLDLSYNAIGGSFPVTFT-NITSLVSLNLE--N----NRLGNKI-- 328 (773)
Q Consensus 287 -----------------------------l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~-- 328 (773)
+++|++|+++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 34444444444444443333332 34555555555 2 3333211
Q ss_pred ---chhhccccccccccccCcccccccccccCC-CCcCceeecCCccCccCCCchh-hccCccCEEEeecccCC
Q 041878 329 ---PEGLERLQNLTVLNLKNNQFKGHIPETIGN-ISGINQLDLSENDFTGEISPSL-ASLANLTSFNVSYNNLS 397 (773)
Q Consensus 329 ---~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~ls~N~l~ 397 (773)
+..+..+++|+.|++++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|+++
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 11234445555555544 444433333433 5556666666666654444333 44566666666666653
No 361
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.81 E-value=4e-22 Score=230.43 Aligned_cols=302 Identities=15% Similarity=0.147 Sum_probs=196.5
Q ss_pred CCEEEEEcCCC-Ccccc-cCccccCCCCCcEEEccCCcccccCCCC----CCCCCCCceEEcccCc--cCCC-CCCCCCC
Q 041878 91 GQVIAIQLPWR-RLGGR-ISEKISQLHALRKLSLHDNLLAGPVPWS----LGFLPNLRGVYLFNNR--LSGS-IPPSIGN 161 (773)
Q Consensus 91 ~~v~~l~l~~~-~l~~~-i~~~l~~l~~L~~L~L~~n~l~~~~~~~----l~~l~~L~~L~L~~n~--l~~~-~p~~l~~ 161 (773)
.+++.|+|+++ .++.. ++..+.++++|++|+|++|.+++..+.. ...+++|++|+|++|. ++.. ++..+.+
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~ 209 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR 209 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHh
Confidence 46788888887 55543 4444557889999999998877644333 3467788888888886 2211 1112244
Q ss_pred CCCCCEEEccCCCCCCCCccccc------------------------------------------------------ccc
Q 041878 162 CPNLQTLDLSNNALIGAIPPSLA------------------------------------------------------NST 187 (773)
Q Consensus 162 l~~L~~L~Ls~N~l~~~~~~~l~------------------------------------------------------~l~ 187 (773)
+++|++|+|++|...+.++..+. .++
T Consensus 210 ~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~ 289 (594)
T 2p1m_B 210 CPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCS 289 (594)
T ss_dssp CTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHT
T ss_pred CCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhC
Confidence 67888888887721111222222 345
Q ss_pred ccceeecccccccccC-CccccCCCccceeeccccccccccCCcccccccCcccccceeecc---------ccccccccC
Q 041878 188 RLYRLNLSYNSLLGSI-PLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLD---------HNLIAGTIP 257 (773)
Q Consensus 188 ~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~---------~n~l~~~~~ 257 (773)
+|++|+|++|.+++.. ...+..+++|++|++++| ++......+. ..+++|++|++. .+.+++...
T Consensus 290 ~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~----~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l 364 (594)
T 2p1m_B 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLA----STCKDLRELRVFPSEPFVMEPNVALTEQGL 364 (594)
T ss_dssp TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHH----HHCTTCCEEEEECSCTTCSSCSSCCCHHHH
T ss_pred CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHH----HhCCCCCEEEEecCcccccccCCCCCHHHH
Confidence 5666666666654322 222345566666666655 3211111111 113367777773 344544333
Q ss_pred ccCC-CCCCccEEECCCCcccCCCCCCcC-cccccceeccc--c----cccccc-----CcccccccccCceEEccCCCC
Q 041878 258 VSLG-KLGLLQEISLSHNKIVGPIPDELG-KLSKLQKLDLS--Y----NAIGGS-----FPVTFTNITSLVSLNLENNRL 324 (773)
Q Consensus 258 ~~l~-~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l 324 (773)
..+. .+++|+.|+++.|++++.....+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .+
T Consensus 365 ~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l 443 (594)
T 2p1m_B 365 VSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LL 443 (594)
T ss_dssp HHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SC
T ss_pred HHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cc
Confidence 3333 367888888888888765444444 47899999999 4 566632 223367789999999987 77
Q ss_pred CCCcchhhcc-ccccccccccCccccccccccc-CCCCcCceeecCCccCccCCCc-hhhccCccCEEEeecccCCC
Q 041878 325 GNKIPEGLER-LQNLTVLNLKNNQFKGHIPETI-GNISGINQLDLSENDFTGEISP-SLASLANLTSFNVSYNNLSG 398 (773)
Q Consensus 325 ~~~~~~~l~~-l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~g 398 (773)
++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++.... .+..+++|+.|++++|+++.
T Consensus 444 ~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 444 TDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred cHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 7777777776 8999999999999987666655 6789999999999999765554 34458999999999999843
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.8e-20 Score=195.54 Aligned_cols=82 Identities=24% Similarity=0.415 Sum_probs=36.5
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCcccccccccccee
Q 041878 113 QLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRL 192 (773)
Q Consensus 113 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 192 (773)
++++|++|++++|.++.. + .+..+++|++|+|++|++++..+ ++++++|++|+|++|.+++ + +.+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEE
Confidence 444455555555544422 2 24444445555555544443322 4444444444444444442 1 124444444444
Q ss_pred eccccccc
Q 041878 193 NLSYNSLL 200 (773)
Q Consensus 193 ~Ls~N~l~ 200 (773)
+|++|+++
T Consensus 118 ~L~~n~i~ 125 (291)
T 1h6t_A 118 SLEHNGIS 125 (291)
T ss_dssp ECTTSCCC
T ss_pred ECCCCcCC
Confidence 44444443
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1e-19 Score=189.77 Aligned_cols=190 Identities=31% Similarity=0.331 Sum_probs=111.5
Q ss_pred cEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccc
Q 041878 118 RKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYN 197 (773)
Q Consensus 118 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N 197 (773)
..+.+..+.+++.. .+..+++|++|++++|.++.. + .++.+++|++|+|++|.+++.. . +..+++|++|+|++|
T Consensus 27 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~-~-l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK-P-LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCc-c-cccCCCCCEEECCCC
Confidence 33444444444322 234566666666666666633 2 3666666666666666666432 2 666666666666666
Q ss_pred cccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCccc
Q 041878 198 SLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIV 277 (773)
Q Consensus 198 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 277 (773)
++++ + ..+..+++|++|+|++|++++. +.+.. +++|++|++++|.+++. ..+..+++|+.|++++|+++
T Consensus 101 ~l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~-----l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 101 KVKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVH-----LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp CCCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGG-----CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred cCCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcC-----CCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 6654 2 2366666666666666666642 22322 23566666666666654 45666666666666666666
Q ss_pred CCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCc
Q 041878 278 GPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKI 328 (773)
Q Consensus 278 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 328 (773)
+..+ +..+++|++|+|++|.+++. + .+..+++|+.|++++|+++...
T Consensus 170 ~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 170 DIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECCC
T ss_pred cchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCCc
Confidence 5433 66666677777777766643 3 3666667777777777665543
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.3e-19 Score=179.09 Aligned_cols=160 Identities=25% Similarity=0.290 Sum_probs=112.3
Q ss_pred CCCCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCC
Q 041878 75 GVGACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGS 154 (773)
Q Consensus 75 ~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 154 (773)
+.+.|. |.+|.|...+ ++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|+..
T Consensus 15 ~~~~Cs--~~~v~c~~~~----------l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSCS--GTTVDCRSKR----------HA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEEE--TTEEECTTSC----------CS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEEe--CCEeEccCCC----------cC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 345555 9999996433 22 4444333 7788888888888877777788888888888888888765
Q ss_pred CCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCccccc
Q 041878 155 IPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVL 234 (773)
Q Consensus 155 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 234 (773)
.+..|..+++|++|+|++|.|++..+..+..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~---------- 148 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK---------- 148 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC----------
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC----------
Confidence 5566778888888888888887665566677777777777777777 55666666666666666666555
Q ss_pred ccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCC
Q 041878 235 AGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGP 279 (773)
Q Consensus 235 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 279 (773)
+..+..|..+++|+.|+|++|.+...
T Consensus 149 -------------------~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 149 -------------------SIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp -------------------CCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred -------------------ccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 33344566777788888888887743
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=4.4e-19 Score=178.17 Aligned_cols=157 Identities=22% Similarity=0.252 Sum_probs=126.3
Q ss_pred ccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEcc
Q 041878 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLE 320 (773)
Q Consensus 241 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 320 (773)
+.+.+++++++++. +|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 35566666666663 343332 678888888888887777788888888888888888876666677888888888888
Q ss_pred CCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCC
Q 041878 321 NNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSV 400 (773)
Q Consensus 321 ~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~ 400 (773)
+|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++|.+
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 88888777777888888888888888888 77888888999999999999999777777888999999999999999887
Q ss_pred c
Q 041878 401 P 401 (773)
Q Consensus 401 p 401 (773)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 6
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.8e-19 Score=178.31 Aligned_cols=155 Identities=21% Similarity=0.260 Sum_probs=123.2
Q ss_pred eeeccccccccccCCcccccccCcccccceeeccccccccccC-ccCCCCCCccEEECCCCcccCCCCCCcCccccccee
Q 041878 215 VLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIP-VSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKL 293 (773)
Q Consensus 215 ~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 293 (773)
.+++++|.++ .+|..+. ..+++|+|++|.+++..+ ..|..+++|+.|+|++|++++..+..|..+++|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~-------~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP-------QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp EEECCSSCCS-SCCSCCC-------TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred EeEeCCCCcc-cCccCCC-------CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 4555555555 3443332 145667777777766644 457788888888888888887777788888889999
Q ss_pred ccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCc
Q 041878 294 DLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFT 373 (773)
Q Consensus 294 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (773)
+|++|+|++..+..|..+++|++|+|++|++++..|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++.
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 99999988888888888899999999999998888888889999999999999999888889999999999999999998
Q ss_pred cCCC
Q 041878 374 GEIS 377 (773)
Q Consensus 374 ~~~~ 377 (773)
+..+
T Consensus 167 c~c~ 170 (220)
T 2v70_A 167 CNCY 170 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 7544
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=4.8e-19 Score=190.96 Aligned_cols=176 Identities=27% Similarity=0.247 Sum_probs=107.6
Q ss_pred ceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccc-cccccceeecccccccccCCccccCCCccceeeccc
Q 041878 142 RGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLA-NSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQH 220 (773)
Q Consensus 142 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 220 (773)
+.+++++|+++ .+|..+. +.+++|+|++|.|++..+..+. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57788888877 4665543 3577788888877766666665 777777777777777766666666666666666666
Q ss_pred cccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccc
Q 041878 221 NNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAI 300 (773)
Q Consensus 221 N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 300 (773)
|++++.. +..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|
T Consensus 98 N~l~~~~-----------------------------~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 148 (361)
T 2xot_A 98 NHLHTLD-----------------------------EFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148 (361)
T ss_dssp SCCCEEC-----------------------------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcCCcCC-----------------------------HHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcC
Confidence 6665333 33445555555566666655555555555556666666666666
Q ss_pred cccCcccc---cccccCceEEccCCCCCCCcchhhccccc--cccccccCcccc
Q 041878 301 GGSFPVTF---TNITSLVSLNLENNRLGNKIPEGLERLQN--LTVLNLKNNQFK 349 (773)
Q Consensus 301 ~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~--L~~L~ls~N~l~ 349 (773)
++..+..| ..+++|+.|+|++|+|+...+..+..++. |+.|+|++|.+.
T Consensus 149 ~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 149 SRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 54333333 44566666666666666555555555554 255555555554
No 368
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.3e-18 Score=173.58 Aligned_cols=124 Identities=21% Similarity=0.212 Sum_probs=74.2
Q ss_pred cCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCC
Q 041878 98 LPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIG 177 (773)
Q Consensus 98 l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 177 (773)
+++++++ .+|..+. +.|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|.|+.
T Consensus 18 c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 94 (220)
T 2v9t_B 18 CRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE 94 (220)
T ss_dssp CTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCC
T ss_pred cCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCc
Confidence 3444444 3444333 567777777777776666666777777777777777766666666666777777777766664
Q ss_pred CCccccccccccceeecccccccccCCccccCCCccceeeccccccc
Q 041878 178 AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLS 224 (773)
Q Consensus 178 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 224 (773)
..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 95 l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 95 LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 44444555666666666666665555555555555555444444444
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=3.5e-19 Score=182.82 Aligned_cols=170 Identities=25% Similarity=0.267 Sum_probs=92.2
Q ss_pred CCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCcccccccccccee
Q 041878 113 QLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRL 192 (773)
Q Consensus 113 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 192 (773)
++.++..+++++|.+++.. .+..+++|++|++++|+++ .+| .++.+++|++|+|++|.+++. +. +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEE
Confidence 3455666666666666432 4566667777777777666 344 566667777777777776643 33 6666666666
Q ss_pred ecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECC
Q 041878 193 NLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLS 272 (773)
Q Consensus 193 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 272 (773)
+|++|++++ ++.. .. ++|++|+|++|++++. + .+.. +++|++|+|++|.+++. + .+..+++|+.|+|+
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~-----l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~ 158 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIH-----LKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLH 158 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTT-----CTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECT
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcC-----cccccEEECCCCcCCCC-h-HHccCCCCCEEECC
Confidence 666666664 2221 11 5555555555555532 1 1221 22444444444444433 1 34445555555555
Q ss_pred CCcccCCCCCCcCcccccceeccccccccc
Q 041878 273 HNKIVGPIPDELGKLSKLQKLDLSYNAIGG 302 (773)
Q Consensus 273 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 302 (773)
+|++++. ..+..+++|+.|++++|.+++
T Consensus 159 ~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 159 GNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 5555543 345555555555555555543
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2.9e-19 Score=183.47 Aligned_cols=171 Identities=27% Similarity=0.249 Sum_probs=119.1
Q ss_pred CCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCcccee
Q 041878 137 FLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVL 216 (773)
Q Consensus 137 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 216 (773)
.+.++..+++++|.+++. + .+..+++|++|++++|.++ .++ .+..+++|++|+|++|++++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 567788889999999854 3 6888999999999999998 455 78899999999999999986554 8889999999
Q ss_pred eccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccc
Q 041878 217 ALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLS 296 (773)
Q Consensus 217 ~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 296 (773)
+|++|++++ +|.... .+|++|+|++|.+++. ..+..+++|+.|+|++|++++. + .+..+++|++|+|+
T Consensus 91 ~L~~N~l~~-l~~~~~-------~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~ 158 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS-------ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLH 158 (263)
T ss_dssp ECCSSCCSC-CTTCCC-------SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECT
T ss_pred ECCCCccCC-cCcccc-------CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECC
Confidence 999999885 332111 3566666666666653 2466666666666666666643 2 45555666666666
Q ss_pred cccccccCcccccccccCceEEccCCCCCCC
Q 041878 297 YNAIGGSFPVTFTNITSLVSLNLENNRLGNK 327 (773)
Q Consensus 297 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 327 (773)
+|++++. ..+..+++|+.|++++|+++..
T Consensus 159 ~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 159 GNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 6666544 4455555555555555555443
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=4.4e-19 Score=208.01 Aligned_cols=223 Identities=22% Similarity=0.244 Sum_probs=103.8
Q ss_pred CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeec
Q 041878 139 PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLAL 218 (773)
Q Consensus 139 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 218 (773)
++++.|+|.+|.+.. ++.. .|+.++|+.|.|.+ ++++.|++. ..+..+..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA-----LLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chhh-----HhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 456777777777774 2322 24444555544432 233334433 34555566666666666
Q ss_pred cccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccc
Q 041878 219 QHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYN 298 (773)
Q Consensus 219 ~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 298 (773)
++|++. .+|..+..+. +|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|+ .+|..|+.+++|++|+|++|
T Consensus 232 s~n~l~-~l~~~~~~l~-----~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N 303 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYD-----FLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDN 303 (727)
T ss_dssp TTSCCS-CCCGGGGGCC-----SCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSS
T ss_pred CCCCCC-CCChhhcCCC-----CCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCC
Confidence 666665 4444443332 5666666666666 56677778888888888888888 67888888888888888888
Q ss_pred cccccCcccccccccCceEEccCCCCCCCcchhhcccc-ccccccccCcccccccccccCCCCcCceeecCCc-------
Q 041878 299 AIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQ-NLTVLNLKNNQFKGHIPETIGNISGINQLDLSEN------- 370 (773)
Q Consensus 299 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N------- 370 (773)
.|+ .+|..|..+++|+.|+|++|+|++.+|..+..+. .+..|+|++|.+++.+|.. |+.|++++|
T Consensus 304 ~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~ 376 (727)
T 4b8c_D 304 MVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREY 376 (727)
T ss_dssp CCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------
T ss_pred CCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccccccc
Confidence 887 6677788888888888888888888888776653 2345788888888887764 455666666
Q ss_pred -cCccCCCchhhccCccCEEEeecccCC
Q 041878 371 -DFTGEISPSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 371 -~l~~~~~~~~~~l~~L~~L~ls~N~l~ 397 (773)
.+.+..+..+..+..+....+++|-+.
T Consensus 377 ~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 377 DSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -------------------------CCC
T ss_pred CCccccccchhhcccccceeeeeccccc
Confidence 333333444445555556666666554
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=2.5e-18 Score=167.59 Aligned_cols=155 Identities=21% Similarity=0.318 Sum_probs=111.3
Q ss_pred cEEECCCCcccCCCCCCcCcccccceeccccccccccCcc-cccccccCceEEccCCCCCCCcchhhccccccccccccC
Q 041878 267 QEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPV-TFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKN 345 (773)
Q Consensus 267 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~ 345 (773)
+.|++++|+++ .+|..+.. +|++|++++|+|++..+. .|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56666666665 45554443 677777777777755553 477777888888888888777777788888888888888
Q ss_pred cccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCchh-hhccCCCCCCCCCCCCCCCCC
Q 041878 346 NQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPPL-LSKKFNSSSFVGNLQLCGYSP 424 (773)
Q Consensus 346 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~~~~~~~~~~n~~~c~~~~ 424 (773)
|++++..+..|.++++|++|+|++|++++..|..+..+++|+.|+|++|+|+|.++.. +...+....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 8888777777888888888888888888888888888888888888888888887743 222222223445555565554
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.2e-18 Score=168.81 Aligned_cols=151 Identities=12% Similarity=0.256 Sum_probs=108.2
Q ss_pred ccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEcc
Q 041878 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLE 320 (773)
Q Consensus 241 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 320 (773)
+|+.|++++|.++ .++ .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|++|+++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4556666666555 223 46667777777777776652 3467777788888888888877677777788888888888
Q ss_pred CCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCC
Q 041878 321 NNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSG 398 (773)
Q Consensus 321 ~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g 398 (773)
+|++++..+..+..+++|++|++++|++.+.+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 888877777778888888888888887333445 57888888888888888885 33 67788888888888888754
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.1e-18 Score=178.55 Aligned_cols=135 Identities=16% Similarity=0.210 Sum_probs=104.3
Q ss_pred hhcccccccceEEEEEEe-CCCCE--EEEEEecccCcc------------------------cHHHHHHHHHHHHccCCC
Q 041878 539 TAEIMGKSTYGTAYKATL-EDGSE--VAVKRLREKTTK------------------------GQKEFEAEAAAIGKIHHP 591 (773)
Q Consensus 539 ~~~~lG~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~~------------------------~~~~~~~E~~~l~~l~h~ 591 (773)
+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+..+++++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999987 67888 999987543111 113678899999999887
Q ss_pred ce--EEeEEEEECCCCeEEEEEeecCC-C----CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCC
Q 041878 592 NL--LALRAYYLGPKGEKLLVFDFMPK-G----SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTS 664 (773)
Q Consensus 592 ni--v~l~~~~~~~~~~~~lV~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~ 664 (773)
++ ...+.. ...++||||+.+ | +|.++.... ++..+..++.|++.|+.|||.+.||+||||||
T Consensus 131 ~i~~p~~~~~-----~~~~lVmE~~g~~g~~~~~L~~~~~~~------~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp 199 (258)
T 1zth_A 131 GVSVPQPYTY-----MKNVLLMEFIGEDELPAPTLVELGREL------KELDVEGIFNDVVENVKRLYQEAELVHADLSE 199 (258)
T ss_dssp TCCCCCEEEE-----ETTEEEEECCEETTEECCBHHHHGGGG------GGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred CCCCCeEEEc-----CCCEEEEEecCCCCCccccHHHHhhcc------ChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 54 333332 256899999942 4 677664431 23346789999999999999678999999999
Q ss_pred CCEEeCCCCCeEEeecCCcccc
Q 041878 665 SNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 665 ~NIll~~~~~~kl~DfG~a~~~ 686 (773)
+|||++. .++|+|||+|...
T Consensus 200 ~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEESS--SEEECCCTTCEET
T ss_pred HHEEEcC--cEEEEECcccccC
Confidence 9999998 8999999999754
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.6e-18 Score=167.26 Aligned_cols=153 Identities=19% Similarity=0.298 Sum_probs=97.7
Q ss_pred cCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccce
Q 041878 112 SQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYR 191 (773)
Q Consensus 112 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 191 (773)
+++++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45667777777777776 444 56677777777777775542 235666777777777777776656666777777777
Q ss_pred eecccccccccCCccccCCCccceeeccccc-cccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEE
Q 041878 192 LNLSYNSLLGSIPLSLTRLPSLSVLALQHNN-LSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEIS 270 (773)
Q Consensus 192 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 270 (773)
|+|++|++++..+..+..+++|++|++++|+ ++ .+ + .+..+++|+.|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~-----------------------------~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DI-----------------------------M-PLKTLPELKSLN 165 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CC-----------------------------G-GGGGCSSCCEEE
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-cc-----------------------------H-hhcCCCCCCEEE
Confidence 7777777766666666666666666666665 33 22 2 345556666666
Q ss_pred CCCCcccCCCCCCcCcccccceecccccccc
Q 041878 271 LSHNKIVGPIPDELGKLSKLQKLDLSYNAIG 301 (773)
Q Consensus 271 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 301 (773)
+++|++++ ++ .+..+++|++|++++|++.
T Consensus 166 l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 166 IQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666664 22 5666667777777777665
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=4.9e-18 Score=165.47 Aligned_cols=157 Identities=22% Similarity=0.310 Sum_probs=110.4
Q ss_pred ceeeccccccccccCccCCCCCCccEEECCCCcccCCCCC-CcCcccccceeccccccccccCcccccccccCceEEccC
Q 041878 243 QFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPD-ELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLEN 321 (773)
Q Consensus 243 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 321 (773)
+++++++|+++ .+|..+.. +|++|++++|++++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45566666664 33443332 677777777777765554 477777888888888888877777788888888888888
Q ss_pred CCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCch-hhccCccCEEEeecccCCCCC
Q 041878 322 NRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPS-LASLANLTSFNVSYNNLSGSV 400 (773)
Q Consensus 322 N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~ls~N~l~g~~ 400 (773)
|+|++..+..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+.. +. ..++...+..+...+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCCC
Confidence 8887777777888888888888888888888888888888888888888888765522 11 11222344556666666
Q ss_pred chhh
Q 041878 401 PPLL 404 (773)
Q Consensus 401 p~~~ 404 (773)
|..+
T Consensus 166 P~~l 169 (192)
T 1w8a_A 166 PSKV 169 (192)
T ss_dssp STTT
T ss_pred ChHH
Confidence 6554
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=7.4e-18 Score=179.23 Aligned_cols=103 Identities=14% Similarity=0.057 Sum_probs=82.6
Q ss_pred ccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccc-cccccCcccccccccccCCCCcCcee
Q 041878 287 LSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLT-VLNLKNNQFKGHIPETIGNISGINQL 365 (773)
Q Consensus 287 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L 365 (773)
+++|+.|+|++|+++...+..|.++++|++|+|.+| ++...+..|.++.+|+ .+++.+ .++...+..|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 577888888888888666677888888888888887 6666677788888888 888887 6776667888888888888
Q ss_pred ecCCccCccCCCchhhccCccCEEEe
Q 041878 366 DLSENDFTGEISPSLASLANLTSFNV 391 (773)
Q Consensus 366 ~L~~N~l~~~~~~~~~~l~~L~~L~l 391 (773)
++++|.++...+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 88888888777778888888888763
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1e-16 Score=153.96 Aligned_cols=139 Identities=24% Similarity=0.223 Sum_probs=116.4
Q ss_pred CCCCCCCcceEeeCCCEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCC
Q 041878 77 GACSGGWAGIKCVKGQVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIP 156 (773)
Q Consensus 77 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 156 (773)
+.|.|.|.++.|... +++ .+|..+ .++|++|+|++|.+++..+..+..+++|++|+|++|++++..+
T Consensus 3 ~~C~C~~~~l~~~~~----------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK----------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp TTCEEETTEEECCSS----------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEeCCCEEEecCC----------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 346556888888543 333 234333 3689999999999998777788999999999999999997777
Q ss_pred CCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccC
Q 041878 157 PSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVP 228 (773)
Q Consensus 157 ~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 228 (773)
..|+.+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|++++..|
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 778999999999999999997777778999999999999999997777778899999999999999986654
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.3e-16 Score=155.43 Aligned_cols=132 Identities=20% Similarity=0.292 Sum_probs=107.2
Q ss_pred cEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCc
Q 041878 267 QEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNN 346 (773)
Q Consensus 267 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N 346 (773)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46677777776 4555443 47788888888887 66677888888888888888888877788888888888888888
Q ss_pred ccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCch
Q 041878 347 QFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+.-
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 88888788888999999999999999976667788899999999999999887653
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.5e-16 Score=151.38 Aligned_cols=132 Identities=23% Similarity=0.252 Sum_probs=93.0
Q ss_pred CCccEEECCCCccc-CCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccccccc
Q 041878 264 GLLQEISLSHNKIV-GPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342 (773)
Q Consensus 264 ~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 342 (773)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55667777777766 55666666777777777777777654 5666677777777777777666666666677777777
Q ss_pred ccCccccccc-ccccCCCCcCceeecCCccCccCCC---chhhccCccCEEEeecccCC
Q 041878 343 LKNNQFKGHI-PETIGNISGINQLDLSENDFTGEIS---PSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 343 ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~ls~N~l~ 397 (773)
+++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777777532 2667777778888888888775554 46777788888888887765
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=9.6e-17 Score=152.72 Aligned_cols=135 Identities=27% Similarity=0.285 Sum_probs=107.9
Q ss_pred ccceeeccccccc-cccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEc
Q 041878 241 QLQFLNLDHNLIA-GTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL 319 (773)
Q Consensus 241 ~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 319 (773)
+|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 5777777777776 56677777788888888888888865 67888888888888888888777877778888999999
Q ss_pred cCCCCCCCc-chhhccccccccccccCcccccccc---cccCCCCcCceeecCCccCccCCCc
Q 041878 320 ENNRLGNKI-PEGLERLQNLTVLNLKNNQFKGHIP---ETIGNISGINQLDLSENDFTGEISP 378 (773)
Q Consensus 320 s~N~l~~~~-~~~l~~l~~L~~L~ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~~ 378 (773)
++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999887753 3778888899999999999886554 47888999999999999887 3443
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.4e-16 Score=148.21 Aligned_cols=127 Identities=21% Similarity=0.276 Sum_probs=72.3
Q ss_pred CCccEEECCCCccc-CCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccccccc
Q 041878 264 GLLQEISLSHNKIV-GPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLN 342 (773)
Q Consensus 264 ~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 342 (773)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34455555555554 44444445555555555555555533 4455555555555555555555555555566666666
Q ss_pred ccCcccccc-cccccCCCCcCceeecCCccCccCCC---chhhccCccCEEEee
Q 041878 343 LKNNQFKGH-IPETIGNISGINQLDLSENDFTGEIS---PSLASLANLTSFNVS 392 (773)
Q Consensus 343 ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~ls 392 (773)
+++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 33556666666666776666665544 456666777776665
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=6.1e-16 Score=148.54 Aligned_cols=134 Identities=20% Similarity=0.298 Sum_probs=96.2
Q ss_pred ccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccC
Q 041878 266 LQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKN 345 (773)
Q Consensus 266 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~ 345 (773)
.+.+++++|+++. +|..+. ++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3455666666653 343332 4666777777777655555666777777777777777766666677777778888888
Q ss_pred cccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCch
Q 041878 346 NQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVPP 402 (773)
Q Consensus 346 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p~ 402 (773)
|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|+++|.+|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 887766666778888888888888888866666677888899999999999888773
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=7e-16 Score=150.14 Aligned_cols=127 Identities=28% Similarity=0.238 Sum_probs=109.9
Q ss_pred EEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCC
Q 041878 95 AIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNA 174 (773)
Q Consensus 95 ~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 174 (773)
.+++++++++ .+|..+. +.|++|+|++|.|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3556666666 5565543 58999999999998 678899999999999999999998888889999999999999999
Q ss_pred CCCCCccccccccccceeecccccccccCCccccCCCccceeecccccccc
Q 041878 175 LIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSG 225 (773)
Q Consensus 175 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 225 (773)
|++..+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 998888889999999999999999997777788899999999999999874
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2.6e-16 Score=146.43 Aligned_cols=128 Identities=26% Similarity=0.303 Sum_probs=111.4
Q ss_pred cccceeeccccccc-cccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEE
Q 041878 240 YQLQFLNLDHNLIA-GTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLN 318 (773)
Q Consensus 240 ~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 318 (773)
++|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 36888888888887 67788888999999999999999865 7788999999999999999987888888899999999
Q ss_pred ccCCCCCCC-cchhhccccccccccccCcccccccc---cccCCCCcCceeecCC
Q 041878 319 LENNRLGNK-IPEGLERLQNLTVLNLKNNQFKGHIP---ETIGNISGINQLDLSE 369 (773)
Q Consensus 319 Ls~N~l~~~-~~~~l~~l~~L~~L~ls~N~l~~~~~---~~~~~l~~L~~L~L~~ 369 (773)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999874 45889999999999999999997665 5788999999999874
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=5.1e-16 Score=165.03 Aligned_cols=243 Identities=14% Similarity=0.099 Sum_probs=155.6
Q ss_pred CCCCcEEEccCCccc--ccCCCCCCCCCCCceEEcccCccCCCCCCCCCC--------CCCCCEEEccCCCCCCCCcccc
Q 041878 114 LHALRKLSLHDNLLA--GPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGN--------CPNLQTLDLSNNALIGAIPPSL 183 (773)
Q Consensus 114 l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~--------l~~L~~L~Ls~N~l~~~~~~~l 183 (773)
+++|+.|||++|+|. ......+ +.++.+.+..|.|. +..|.+ +++|+.|+|.+ .++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 788999999999887 2222122 22344444444332 233444 66666666666 5554445556
Q ss_pred ccccccceeecccccccccCCccccCCCccceeeccccccc----c----------------------ccCCcccccccC
Q 041878 184 ANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLS----G----------------------SVPNNWGVLAGN 237 (773)
Q Consensus 184 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~----~----------------------~~p~~~~~l~~~ 237 (773)
.++++|+.|++++|.+....+..|.++.++..+.+..+... . .++..+... ..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~-~~ 199 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKA-GL 199 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHT-TC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhc-cc
Confidence 66666666666666665555555555555555554442210 0 001000000 00
Q ss_pred cccccceeeccccccccccCccC-CCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCc-
Q 041878 238 KSYQLQFLNLDHNLIAGTIPVSL-GKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLV- 315 (773)
Q Consensus 238 ~~~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~- 315 (773)
...++..+.+.++-.. .....+ ..+++|+.|+|++|+++...+.+|.++++|+.|+|++| ++...+.+|.++++|+
T Consensus 200 ~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 200 QPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAG 277 (329)
T ss_dssp CGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred CccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccE
Confidence 1224455555544221 111111 23688999999999998777778999999999999988 7767778899999999
Q ss_pred eEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeec
Q 041878 316 SLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDL 367 (773)
Q Consensus 316 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 367 (773)
.|++.+ .++...+..|.++++|+.|++++|+++...+..|.++++|+.++.
T Consensus 278 ~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 278 TLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999988 777777889999999999999999999777889999999998864
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=8.4e-17 Score=170.59 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=99.5
Q ss_pred HHhhcccccccceEEEEEEeCCCCEEEEEEecccCc--------------ccHH--------HHHHHHHHHHccCCCceE
Q 041878 537 CATAEIMGKSTYGTAYKATLEDGSEVAVKRLREKTT--------------KGQK--------EFEAEAAAIGKIHHPNLL 594 (773)
Q Consensus 537 ~~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~--------~~~~E~~~l~~l~h~niv 594 (773)
|++.+.||+|+||.||+|...+|+.||||+++.... .... ....|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345788999999999999998999999998753210 0001 123466777777554432
Q ss_pred --EeEEEEECCCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCC
Q 041878 595 --ALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEK 672 (773)
Q Consensus 595 --~l~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~ 672 (773)
..++.. ..++||||++|++|.++... .....++.||+.++.||| +.|||||||||.|||++++
T Consensus 177 vp~p~~~~-----~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH-~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 177 VPEPIAQS-----RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLA-KHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp CCCEEEEE-----TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHH-HTTEECSCCSTTSEEEEEE
T ss_pred CCeeeecc-----CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHH-HCCCcCCCCCHHHEEEeCC
Confidence 222221 34799999999888654321 123467899999999999 8999999999999999887
Q ss_pred CC----------eEEeecCCcccccc
Q 041878 673 TN----------PRIADFGLSRLMTA 688 (773)
Q Consensus 673 ~~----------~kl~DfG~a~~~~~ 688 (773)
+. +.|+||+.+.....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CCcccccccccceEEEEeCCcccCCC
Confidence 73 89999998765543
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=2e-14 Score=156.14 Aligned_cols=263 Identities=11% Similarity=0.081 Sum_probs=136.6
Q ss_pred CCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeec
Q 041878 115 HALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNL 194 (773)
Q Consensus 115 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 194 (773)
..++.+.+.+ .++..-..+|.++ +|+.++|..| ++..-..+|.++ +|+.++|.+ .++...+.+|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4555555543 3443445555554 5666666554 443444445553 466666654 444444455666666666666
Q ss_pred ccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccEEECCCC
Q 041878 195 SYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHN 274 (773)
Q Consensus 195 s~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N 274 (773)
++|+++......|. ..+|+.+.|..+ ++..-...|. .+.+|+.+++..| ++.+...+|.+ .+|+.+.+ .|
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~-----~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~ 257 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFL-----KTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PN 257 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTT-----TCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ET
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhh-----CCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CC
Confidence 66666543333333 455666655533 3322222222 2225555555543 44444444554 45555555 33
Q ss_pred cccCCCCCCcCcccccceecccccccc-----ccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccc
Q 041878 275 KIVGPIPDELGKLSKLQKLDLSYNAIG-----GSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFK 349 (773)
Q Consensus 275 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~ 349 (773)
.++.....+|.++++|+.+++.+|.+. ...+..|.++++|+.+.|. |.++......|.++++|+.++|..| ++
T Consensus 258 ~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 258 GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 344344455555666666666555443 2334455666666666665 3354444555666666666666433 44
Q ss_pred cccccccCCCCcCceeecCCccCccCCCchhhccC-ccCEEEeeccc
Q 041878 350 GHIPETIGNISGINQLDLSENDFTGEISPSLASLA-NLTSFNVSYNN 395 (773)
Q Consensus 350 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~ 395 (773)
......|.++ +|+.|++++|.+....+..|.+++ +++.|++..|.
T Consensus 336 ~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 336 QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 4445556666 666666666665544445555553 45566555443
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1.9e-14 Score=156.25 Aligned_cols=248 Identities=11% Similarity=0.079 Sum_probs=204.5
Q ss_pred ccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccc
Q 041878 109 EKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTR 188 (773)
Q Consensus 109 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 188 (773)
.++.+. +|+.+.|.++ ++.....+|.++ +|+.+.|.+ .++..-+..|.+|++|+.++|++|.++.....+|. ..+
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 456664 7999999876 776777888885 799999986 77766778899999999999999999965555666 689
Q ss_pred cceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCccE
Q 041878 189 LYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQE 268 (773)
Q Consensus 189 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 268 (773)
|+.+.|..+ ++......|.++++|+.+++..| ++..-...|.. .+|+.+.+ .+.++.+...+|.++++|+.
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~------~~L~~i~l-p~~i~~I~~~aF~~c~~L~~ 275 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE------SGITTVKL-PNGVTNIASRAFYYCPELAE 275 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT------CCCSEEEE-ETTCCEECTTTTTTCTTCCE
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc------CCccEEEe-CCCccEEChhHhhCCCCCCE
Confidence 999999855 77677888999999999999875 55344444433 37999999 56678788899999999999
Q ss_pred EECCCCccc-----CCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccc
Q 041878 269 ISLSHNKIV-----GPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNL 343 (773)
Q Consensus 269 L~L~~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l 343 (773)
+++.+|.+. ...+.+|.++++|+.++|. +.++......|.++++|+.|.|.+| ++......|.++ +|+.|++
T Consensus 276 l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l 352 (401)
T 4fdw_A 276 VTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKV 352 (401)
T ss_dssp EEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEE
T ss_pred EEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEE
Confidence 999998875 3556789999999999999 5588777889999999999999665 777777889999 9999999
Q ss_pred cCcccccccccccCCCC-cCceeecCCccCc
Q 041878 344 KNNQFKGHIPETIGNIS-GINQLDLSENDFT 373 (773)
Q Consensus 344 s~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 373 (773)
++|.+....+..|.+++ +++.|++..+.+.
T Consensus 353 ~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 353 EGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 99999877777788885 7889999887654
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=4.9e-17 Score=159.27 Aligned_cols=150 Identities=23% Similarity=0.323 Sum_probs=117.8
Q ss_pred cceeeccccccccccCc------cCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCc
Q 041878 242 LQFLNLDHNLIAGTIPV------SLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLV 315 (773)
Q Consensus 242 L~~L~L~~n~l~~~~~~------~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 315 (773)
++.++++.+.+++..|. .+..+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 34444444444444333 77788889999999999886 66 8888899999999999998 6777788889999
Q ss_pred eEEccCCCCCCCcchhhccccccccccccCcccccccc-cccCCCCcCceeecCCccCccCCCch----------hhccC
Q 041878 316 SLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIP-ETIGNISGINQLDLSENDFTGEISPS----------LASLA 384 (773)
Q Consensus 316 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~----------~~~l~ 384 (773)
.|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|++++.+|.. +..++
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~ 174 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLP 174 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCS
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCC
Confidence 99999999976 44 68889999999999999985433 57888999999999999998776653 77889
Q ss_pred ccCEEEeecccCCC
Q 041878 385 NLTSFNVSYNNLSG 398 (773)
Q Consensus 385 ~L~~L~ls~N~l~g 398 (773)
+|+.|| +|.++.
T Consensus 175 ~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 175 NLKKLD--GMPVDV 186 (198)
T ss_dssp SCSEEC--CGGGTT
T ss_pred CcEEEC--CcccCH
Confidence 999886 777654
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=6.9e-15 Score=140.95 Aligned_cols=132 Identities=21% Similarity=0.224 Sum_probs=94.1
Q ss_pred CCCCCCccEEECCCCcccCCCCCCcCccc-ccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccc
Q 041878 260 LGKLGLLQEISLSHNKIVGPIPDELGKLS-KLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNL 338 (773)
Q Consensus 260 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 338 (773)
+.++.+|+.|++++|+++. +|. +..+. +|++|++++|.|++. ..+..+++|+.|+|++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4456667777777777773 343 44444 777777777777754 567777777777777777776554555777788
Q ss_pred ccccccCccccccccc--ccCCCCcCceeecCCccCccCCCch----hhccCccCEEEeecccCC
Q 041878 339 TVLNLKNNQFKGHIPE--TIGNISGINQLDLSENDFTGEISPS----LASLANLTSFNVSYNNLS 397 (773)
Q Consensus 339 ~~L~ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~ls~N~l~ 397 (773)
++|++++|+++ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888888875 4454 6778888888888888887 44553 788888888888888754
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.4e-16 Score=155.96 Aligned_cols=127 Identities=26% Similarity=0.310 Sum_probs=96.6
Q ss_pred ccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEcc
Q 041878 241 QLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLE 320 (773)
Q Consensus 241 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 320 (773)
+|++|+|++|.+++ +| .+..+++|+.|++++|+++ .+|..+..+++|++|++++|++++ +| .+..+++|+.|+++
T Consensus 49 ~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 49 ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 44555555555544 33 5666777888888888887 567777777889999999998885 44 68888999999999
Q ss_pred CCCCCCCcc-hhhccccccccccccCcccccccccc----------cCCCCcCceeecCCccCcc
Q 041878 321 NNRLGNKIP-EGLERLQNLTVLNLKNNQFKGHIPET----------IGNISGINQLDLSENDFTG 374 (773)
Q Consensus 321 ~N~l~~~~~-~~l~~l~~L~~L~ls~N~l~~~~~~~----------~~~l~~L~~L~L~~N~l~~ 374 (773)
+|++++..+ ..+..+++|++|++++|.+.+.+|.. +..+++|+.|| +|.++.
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 124 NNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 999976543 57888999999999999998776653 78899999887 777764
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.5e-14 Score=138.52 Aligned_cols=110 Identities=21% Similarity=0.185 Sum_probs=71.2
Q ss_pred cccCCCCCcEEEccCCcccccCCCCCCCC-CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccc
Q 041878 110 KISQLHALRKLSLHDNLLAGPVPWSLGFL-PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTR 188 (773)
Q Consensus 110 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 188 (773)
.+.++++|+.|+|++|.++. +|. +..+ ++|++|+|++|+|++. +.++.+++|++|+|++|.+++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34566677777777777773 343 3333 3777777777777754 56677777777777777777443344467777
Q ss_pred cceeecccccccccCCc--cccCCCccceeeccccccc
Q 041878 189 LYRLNLSYNSLLGSIPL--SLTRLPSLSVLALQHNNLS 224 (773)
Q Consensus 189 L~~L~Ls~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~ 224 (773)
|++|+|++|+++ .+|. .+..+++|+.|++++|+++
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 777777777775 3443 5666666666666666665
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=6.2e-14 Score=133.34 Aligned_cols=108 Identities=24% Similarity=0.311 Sum_probs=71.2
Q ss_pred ceeccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCc
Q 041878 291 QKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSEN 370 (773)
Q Consensus 291 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 370 (773)
+.|++++|.|+ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44455555544 2333332 45666666666666666666666666666666667666555556677777777777777
Q ss_pred cCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 371 DFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 371 ~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
+|++..+..+..+++|+.|+|++|+|++.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776666667778888888888888887765
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.9e-13 Score=129.92 Aligned_cols=102 Identities=22% Similarity=0.184 Sum_probs=60.6
Q ss_pred EEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCC
Q 041878 96 IQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNAL 175 (773)
Q Consensus 96 l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 175 (773)
+++++++++. +|..+. +.|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 14 l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 4455555553 444442 5666666666666666566666666666666666666655555556666666666666666
Q ss_pred CCCCccccccccccceeeccccccc
Q 041878 176 IGAIPPSLANSTRLYRLNLSYNSLL 200 (773)
Q Consensus 176 ~~~~~~~l~~l~~L~~L~Ls~N~l~ 200 (773)
++..+..|..+++|++|+|++|.+.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 6444445556666666666666554
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=3.3e-13 Score=128.75 Aligned_cols=103 Identities=22% Similarity=0.260 Sum_probs=59.3
Q ss_pred EEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCC
Q 041878 95 AIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNA 174 (773)
Q Consensus 95 ~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 174 (773)
.+++++++++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666653 4454443 566666666666665556566666666666666666665444445566666666666666
Q ss_pred CCCCCccccccccccceeeccccccc
Q 041878 175 LIGAIPPSLANSTRLYRLNLSYNSLL 200 (773)
Q Consensus 175 l~~~~~~~l~~l~~L~~L~Ls~N~l~ 200 (773)
|++..+..|..+++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 65443334555555555555555554
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=2e-13 Score=130.20 Aligned_cols=90 Identities=22% Similarity=0.288 Sum_probs=52.0
Q ss_pred ccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEe
Q 041878 312 TSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNV 391 (773)
Q Consensus 312 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 391 (773)
++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34445555555554444555555555555555555555444444566666666666666666544445666667777777
Q ss_pred ecccCCCCCc
Q 041878 392 SYNNLSGSVP 401 (773)
Q Consensus 392 s~N~l~g~~p 401 (773)
++|+|.+..+
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 7777766544
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.39 E-value=4.6e-15 Score=159.57 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=27.9
Q ss_pred ccccccCceEEccCCCCCCCc----chhhccccccccccccCcccccccccccCCC---C--cCceee--cCCccCc
Q 041878 308 FTNITSLVSLNLENNRLGNKI----PEGLERLQNLTVLNLKNNQFKGHIPETIGNI---S--GINQLD--LSENDFT 373 (773)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l---~--~L~~L~--L~~N~l~ 373 (773)
+..+++|++|+|++|.|++.. +..+...++|++|+|++|.|++.....+..+ . .|+.+. +..|.++
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 334445555555555554322 2223334555555555555554333333221 1 155565 5566655
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=6.9e-15 Score=158.22 Aligned_cols=65 Identities=14% Similarity=0.215 Sum_probs=28.7
Q ss_pred ccccccccccccCcccccc----cccccCCCCcCceeecCCccCccCC----CchhhccCccCEEEeecccCC
Q 041878 333 ERLQNLTVLNLKNNQFKGH----IPETIGNISGINQLDLSENDFTGEI----SPSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 333 ~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~ls~N~l~ 397 (773)
..+++|++|+|++|.+++. ++..+...++|+.|+|++|.|+... +..+...++|+.|+|++|.|+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3344444444444444431 1333344445555555555554321 122223345555555555554
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.36 E-value=2.7e-11 Score=131.89 Aligned_cols=284 Identities=12% Similarity=0.059 Sum_probs=184.7
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCcc--------------------
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRL-------------------- 151 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l-------------------- 151 (773)
.++.+.|+. +++..-..++.++++|+.++|.++ ++.....+|.++.+|+.+.+..+--
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~ 149 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEG 149 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCcc
Confidence 466666653 344333455677777777777644 4444455666666666665543310
Q ss_pred -CCCCCCCCCCCCCCCEEEccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCc
Q 041878 152 -SGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNN 230 (773)
Q Consensus 152 -~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 230 (773)
...-...|.++++|+.+.+.++. .......|.++++|+.+.+..| ++......+.++..|+.+.+..+... +.+.
T Consensus 150 ~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~ 225 (394)
T 4fs7_A 150 VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDF 225 (394)
T ss_dssp CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTT
T ss_pred ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehh
Confidence 00112345566666666665443 2234455666666666666554 33344455666666666666554432 1111
Q ss_pred ccccccCcccccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccc
Q 041878 231 WGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTN 310 (773)
Q Consensus 231 ~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 310 (773)
. ....+|+.+.+..+ ++......+..+..|+.+.+..+... .....|..+..++.+.+..+.+. ...|..
T Consensus 226 ~-----~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~ 295 (394)
T 4fs7_A 226 A-----LSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYG 295 (394)
T ss_dssp T-----TTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTT
T ss_pred h-----cccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccc
Confidence 1 11235777776543 34455667788888888888877554 45667888888888887766543 346788
Q ss_pred cccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEE
Q 041878 311 ITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFN 390 (773)
Q Consensus 311 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 390 (773)
+.+|+.+.+.++ ++......|.++.+|+.++|.++ ++......|.++.+|+.+++..| ++.....+|.++.+|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 899999999765 65566778999999999999754 66566788999999999999877 7766778899999999999
Q ss_pred eecc
Q 041878 391 VSYN 394 (773)
Q Consensus 391 ls~N 394 (773)
+..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 8755
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3e-12 Score=136.90 Aligned_cols=108 Identities=25% Similarity=0.280 Sum_probs=82.8
Q ss_pred CCCCcceEeeCCCEEEEEcCCC-CcccccCccccCCCCCcEEEccC-CcccccCCCCCCCCCCCceEEcccCccCCCCCC
Q 041878 80 SGGWAGIKCVKGQVIAIQLPWR-RLGGRISEKISQLHALRKLSLHD-NLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPP 157 (773)
Q Consensus 80 ~~~w~gv~c~~~~v~~l~l~~~-~l~~~i~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 157 (773)
.|.|.+|.|. ++ ++++ +|. |..+++|++|+|++ |.|++..+..|+.|++|++|+|++|+|++..|.
T Consensus 7 ~C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 7 PHGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp CSSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred cccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 4447777774 33 5553 777 88888888888886 888887778888888888888888888888888
Q ss_pred CCCCCCCCCEEEccCCCCCCCCccccccccccceeeccccccc
Q 041878 158 SIGNCPNLQTLDLSNNALIGAIPPSLANSTRLYRLNLSYNSLL 200 (773)
Q Consensus 158 ~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 200 (773)
.|+++++|++|+|++|+|++..+..+..++ |++|+|.+|.+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 888888888888888888855555555554 788888777776
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=8.1e-12 Score=133.52 Aligned_cols=93 Identities=22% Similarity=0.243 Sum_probs=49.0
Q ss_pred ccccccCceEEccC-CCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCcc
Q 041878 308 FTNITSLVSLNLEN-NRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANL 386 (773)
Q Consensus 308 ~~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 386 (773)
+..+++|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444455555555555555555555555555555555555555555544444444443 6
Q ss_pred CEEEeecccCCCCCc
Q 041878 387 TSFNVSYNNLSGSVP 401 (773)
Q Consensus 387 ~~L~ls~N~l~g~~p 401 (773)
+.|+|.+|+|.+.+.
T Consensus 106 ~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 106 QELVLSGNPLHCSCA 120 (347)
T ss_dssp CEEECCSSCCCCCGG
T ss_pred eEEEeeCCCccCCCc
Confidence 666666666665544
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.17 E-value=5e-10 Score=121.74 Aligned_cols=272 Identities=8% Similarity=0.114 Sum_probs=145.3
Q ss_pred ccccCCC-CCcEEEccCCcccccCCCCCCCCCCCceEEcccCc---cCCCCCCCCCCCCCCCEEEccCCCCCCCCccccc
Q 041878 109 EKISQLH-ALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNR---LSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLA 184 (773)
Q Consensus 109 ~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~ 184 (773)
.++.++. .|+.+.+.++ ++.+-..+|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++.....++.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3455553 4666666543 554556666667777777666553 44333455666666666666543 3333344556
Q ss_pred cccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCC
Q 041878 185 NSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLG 264 (773)
Q Consensus 185 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~ 264 (773)
.+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++..-...|. ..+|+.+.+..+-. .....+|..+.
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~------~~~l~~i~ip~~~~-~i~~~af~~c~ 205 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT------GTALTQIHIPAKVT-RIGTNAFSECF 205 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT------TCCCSEEEECTTCC-EECTTTTTTCT
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEecccccc------ccceeEEEECCccc-ccccchhhhcc
Confidence 6666666666533 22233445555666666655443 2211111111 11344444433221 12223333333
Q ss_pred CccEEECCCC------------------------------------cccCCCCCCcCcccccceeccccccccccCcccc
Q 041878 265 LLQEISLSHN------------------------------------KIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTF 308 (773)
Q Consensus 265 ~L~~L~L~~N------------------------------------~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 308 (773)
+|+......+ .++..-..+|.++.+|+.+.+..+..+ .....|
T Consensus 206 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF 284 (394)
T 4gt6_A 206 ALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAF 284 (394)
T ss_dssp TCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTT
T ss_pred ccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccc
Confidence 3333322211 111122345666677777777654332 445566
Q ss_pred cccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCE
Q 041878 309 TNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTS 388 (773)
Q Consensus 309 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 388 (773)
.++++|+.+.+. +.++......|.++.+|+.++|..+ ++......|.++.+|+.+.|..+ ++.....+|.++.+|+.
T Consensus 285 ~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~ 361 (394)
T 4gt6_A 285 MNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNN 361 (394)
T ss_dssp TTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCE
T ss_pred ccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCE
Confidence 777777777775 4454455556777777777777654 55445566777777777777544 55455567777777777
Q ss_pred EEeeccc
Q 041878 389 FNVSYNN 395 (773)
Q Consensus 389 L~ls~N~ 395 (773)
+++.+|.
T Consensus 362 i~~~~~~ 368 (394)
T 4gt6_A 362 IEYSGSR 368 (394)
T ss_dssp EEESSCH
T ss_pred EEECCce
Confidence 7777654
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.15 E-value=5.4e-10 Score=121.53 Aligned_cols=269 Identities=10% Similarity=0.019 Sum_probs=153.4
Q ss_pred CccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCcccccccc
Q 041878 108 SEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANST 187 (773)
Q Consensus 108 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 187 (773)
..++.++++|+.+.|.. .++..-..+|.++++|+.++|.++ ++..-...|.++.+|+.+.+..+ +......+|.+..
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 45688899999999975 477667788999999999999765 55455567888888888877654 2223333343333
Q ss_pred ccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccccccccccCccCCCCCCcc
Q 041878 188 RLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDHNLIAGTIPVSLGKLGLLQ 267 (773)
Q Consensus 188 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 267 (773)
.+........ .......|.++++|+.+.+.++-.+ .....| ..+.+|+.+.+..| ++.+....|.++..|+
T Consensus 141 ~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F-----~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 141 FKEITIPEGV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLF-----SGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp CSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTT-----TTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred ccccccCccc--cccchhhhcccCCCcEEecCCccce-eccccc-----cCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 2222221111 1122334555555555555433211 111111 12224555555443 3333344444444444
Q ss_pred EEECCCCcc---------------------cCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCC
Q 041878 268 EISLSHNKI---------------------VGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGN 326 (773)
Q Consensus 268 ~L~L~~N~l---------------------~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 326 (773)
.+.+..+.. +......+..+..|+.+.+..+... .....|..+..++.+.+..+.+
T Consensus 212 ~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i-- 288 (394)
T 4fs7_A 212 NMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV-- 288 (394)
T ss_dssp BCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE--
T ss_pred eeecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee--
Confidence 444443322 2122334555566666666555333 4445566666666666655433
Q ss_pred CcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecc
Q 041878 327 KIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYN 394 (773)
Q Consensus 327 ~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 394 (773)
....+..+.+|+.+.+.++ ++......|.++.+|+.++|.++ ++.....+|.++.+|+.+++..|
T Consensus 289 -~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 289 -PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp -CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred -ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 2235666777787777654 55455667778888888888644 66555677888888888877654
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.14 E-value=1.6e-09 Score=117.77 Aligned_cols=286 Identities=12% Similarity=0.187 Sum_probs=185.8
Q ss_pred EEEEEcCCCCcccccCccccCCCCCcEEEccCCc---ccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEE
Q 041878 93 VIAIQLPWRRLGGRISEKISQLHALRKLSLHDNL---LAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLD 169 (773)
Q Consensus 93 v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~---l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 169 (773)
++++.++. .++..-..++.++++|+.+.+.+|. ++.....+|.++.+|+.+.+..+ ++..-...|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 44555543 2333335567888999999988764 66566778888999998887654 4435556788899999999
Q ss_pred ccCCCCCCCCccccccccccceeecccccccccCCccccCCCccceeeccccccccccCCcccccccCcccccceeeccc
Q 041878 170 LSNNALIGAIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKSYQLQFLNLDH 249 (773)
Q Consensus 170 Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~~~L~~L~L~~ 249 (773)
+..+ +.......+..+.+|+.+.+..+ ++......|. ..+|+.+.+..+-.. .....|.. +.++.......
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~-----c~~l~~~~~~~ 214 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSE-----CFALSTITSDS 214 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTT-----CTTCCEEEECC
T ss_pred ccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhh-----ccccceecccc
Confidence 9754 34355667888888999888765 4433344444 356888877654322 11222211 11222221111
Q ss_pred ------------------------------------cccccccCccCCCCCCccEEECCCCcccCCCCCCcCccccccee
Q 041878 250 ------------------------------------NLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKL 293 (773)
Q Consensus 250 ------------------------------------n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 293 (773)
+.++.+...+|.++..|+.+.+.++..+ ....+|.++++|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i 293 (394)
T 4gt6_A 215 ESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDI 293 (394)
T ss_dssp SSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEE
T ss_pred cccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccc
Confidence 2233344557788888999988766544 556678888899999
Q ss_pred ccccccccccCcccccccccCceEEccCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCc
Q 041878 294 DLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFT 373 (773)
Q Consensus 294 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (773)
.+. +.++......|.++.+|+.+.|..+ ++......|.++.+|+.+.+..+ ++......|.++.+|+.+++.+|...
T Consensus 294 ~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 294 EFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp ECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred cCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 886 5566566678888999999999765 65566678889999999999654 66566778889999999999888654
Q ss_pred cCCCchhhccCccCEEEeecccC
Q 041878 374 GEISPSLASLANLTSFNVSYNNL 396 (773)
Q Consensus 374 ~~~~~~~~~l~~L~~L~ls~N~l 396 (773)
. ..+....+|+.+.+..|.+
T Consensus 371 ~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 371 W---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp H---HTCBCCCCC----------
T ss_pred h---hhhhccCCCCEEEeCCCCE
Confidence 2 3556677788887766654
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=6.1e-11 Score=121.26 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=103.1
Q ss_pred hcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEECCCCeEEEEEeecCCCC
Q 041878 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPKGS 618 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~lV~e~~~~g~ 618 (773)
...++.|+.+.||++... ++.+++|............+.+|+++++.+. +..+.++++++. ..+..|+||||++|.+
T Consensus 19 ~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 19 VKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-HDGWSNLLMSEADGVL 96 (263)
T ss_dssp EECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-ETTEEEEEEECCSSEE
T ss_pred EeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-cCCceEEEEEecCCee
Confidence 456777888999999754 6899999987532233456889999999885 566778888874 4568899999999999
Q ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccC--------------------------------------------
Q 041878 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHVE-------------------------------------------- 654 (773)
Q Consensus 619 L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~-------------------------------------------- 654 (773)
|.+.... ......++.++++++..||.-
T Consensus 97 l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 97 CSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 9875321 112246788899999999940
Q ss_pred --------------CCceecCCCCCCEEeCCCCCeEEeecCCcc
Q 041878 655 --------------ENMIHGNLTSSNVLLDEKTNPRIADFGLSR 684 (773)
Q Consensus 655 --------------~~iiH~Dik~~NIll~~~~~~kl~DfG~a~ 684 (773)
..++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876556799999774
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.08 E-value=1.6e-11 Score=130.78 Aligned_cols=59 Identities=20% Similarity=0.380 Sum_probs=31.0
Q ss_pred ccccceecccccccccc----CcccccccccCceEEccCCCCCCCcchhhcc-ccccccccccCcc
Q 041878 287 LSKLQKLDLSYNAIGGS----FPVTFTNITSLVSLNLENNRLGNKIPEGLER-LQNLTVLNLKNNQ 347 (773)
Q Consensus 287 l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~ls~N~ 347 (773)
+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.+++.....+.. + ...+++++|+
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 45566666666655542 2233344566666666666665444333333 2 2445666665
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.05 E-value=1.8e-11 Score=130.39 Aligned_cols=206 Identities=15% Similarity=0.178 Sum_probs=109.8
Q ss_pred CCEEEEEcCCCCccc-c-------cCccccCCCCCcEEEccCCccc---------ccCCCCCCCCCCCceEEcccCccCC
Q 041878 91 GQVIAIQLPWRRLGG-R-------ISEKISQLHALRKLSLHDNLLA---------GPVPWSLGFLPNLRGVYLFNNRLSG 153 (773)
Q Consensus 91 ~~v~~l~l~~~~l~~-~-------i~~~l~~l~~L~~L~L~~n~l~---------~~~~~~l~~l~~L~~L~L~~n~l~~ 153 (773)
.+|+.|.+....+.| . +.+++.++++|+.|.+.++... +.+...+..+|+|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457777777555543 2 2344567788888888664321 112233445566777776665211
Q ss_pred CCCCCCCCCCCCCEEEccCCCCCCCCccccc--cccccceeeccc--ccccccCCccccCCCccceeeccccccccccCC
Q 041878 154 SIPPSIGNCPNLQTLDLSNNALIGAIPPSLA--NSTRLYRLNLSY--NSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPN 229 (773)
Q Consensus 154 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~Ls~--N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 229 (773)
.++. +. +++|++|+|..|.+.......+. .+++|++|+|+. |...+... ..
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~-----------------------~~ 240 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD-----------------------MN 240 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC-----------------------GG
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh-----------------------HH
Confidence 1222 22 56666666666665433222333 456666666542 11111000 00
Q ss_pred cccc-cccCcccccceeeccccccccccCccC---CCCCCccEEECCCCcccCC----CCCCcCcccccceecccccccc
Q 041878 230 NWGV-LAGNKSYQLQFLNLDHNLIAGTIPVSL---GKLGLLQEISLSHNKIVGP----IPDELGKLSKLQKLDLSYNAIG 301 (773)
Q Consensus 230 ~~~~-l~~~~~~~L~~L~L~~n~l~~~~~~~l---~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 301 (773)
.+.. +....+++|++|+|.+|.+++..+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.++
T Consensus 241 ~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 241 VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 0000 000122356666666665553222222 2467888888888888753 3444566788999999999887
Q ss_pred ccCcccccccccCceEEccCCC
Q 041878 302 GSFPVTFTNITSLVSLNLENNR 323 (773)
Q Consensus 302 ~~~~~~~~~l~~L~~L~Ls~N~ 323 (773)
......+...- ...+++++|+
T Consensus 321 d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHHHHc-CCEEEecCCc
Confidence 65444444311 4668888887
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.01 E-value=4.4e-10 Score=114.60 Aligned_cols=126 Identities=15% Similarity=0.164 Sum_probs=93.5
Q ss_pred ccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCc--eEEeEEEEECCCCeEEEEEeecCCCCHHH
Q 041878 544 GKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN--LLALRAYYLGPKGEKLLVFDFMPKGSLAS 621 (773)
Q Consensus 544 G~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~lV~e~~~~g~L~~ 621 (773)
+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.+ +.+++++.. ..+..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT-EAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-CSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc-CCCCCEEEEEecCCcccC-
Confidence 355669999998777889999997643 2345788999999886544 455777764 445789999999998883
Q ss_pred HHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCC----------------------------------------------
Q 041878 622 FLHARGPETIVNWATRMSIAIGIARGLNYLHVEE---------------------------------------------- 655 (773)
Q Consensus 622 ~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~---------------------------------------------- 655 (773)
... .+ ...++.++++.+..|| ..
T Consensus 104 -~~~------~~---~~~~~~~l~~~l~~lh-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 -SSH------LA---PAEKVSIMADAMRRLH-TLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp -TSC------CC---HHHHHHHHHHHHHHHT-TSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred -cCc------CC---HhHHHHHHHHHHHHHh-CCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 11 1256677788888888 32
Q ss_pred ------------CceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 656 ------------NMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 656 ------------~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
+++|+|++|.||++++++.+.|+|||.+..
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 299999999999998776677999998753
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=2.7e-09 Score=114.46 Aligned_cols=140 Identities=15% Similarity=0.198 Sum_probs=102.8
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEec--ccC-cccHHHHHHHHHHHHccCC--CceEEeEEEEECCC--CeEEEEEee
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLR--EKT-TKGQKEFEAEAAAIGKIHH--PNLLALRAYYLGPK--GEKLLVFDF 613 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~--~~~~lV~e~ 613 (773)
+.++.|.++.||+.... +..+++|+.. ... .....++.+|+.+++.+.+ ..+.+++.++.... +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56899999999999876 4678888875 322 1234578889999999974 45778888874332 458999999
Q ss_pred cCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc----------------------------------------
Q 041878 614 MPKGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV---------------------------------------- 653 (773)
Q Consensus 614 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~---------------------------------------- 653 (773)
++|..+.+.. ...++..++..++.+++++|..||.
T Consensus 123 v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9988774311 1225677788899999999999993
Q ss_pred -----------------CCCceecCCCCCCEEeCCCCC--eEEeecCCcccc
Q 041878 654 -----------------EENMIHGNLTSSNVLLDEKTN--PRIADFGLSRLM 686 (773)
Q Consensus 654 -----------------~~~iiH~Dik~~NIll~~~~~--~kl~DfG~a~~~ 686 (773)
...++|||+++.||+++.++. +.|+||+.+..-
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 146899999999999998764 689999988753
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.79 E-value=1.3e-09 Score=114.02 Aligned_cols=184 Identities=20% Similarity=0.190 Sum_probs=115.3
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCc--eEEeEEEEECCC--CeEEEEEeecC
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPN--LLALRAYYLGPK--GEKLLVFDFMP 615 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~--~~~~lV~e~~~ 615 (773)
+.++.|....||+.. ..+++|..... .....+.+|+++++.+. +.. +.+.+....... ...|+|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458899999999873 56888986432 34567899999998884 322 334444331111 13588999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc------------------------------------------
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV------------------------------------------ 653 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~------------------------------------------ 653 (773)
|.++.+.... .++..++..++.++++.+..||.
T Consensus 100 G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9888653322 14555666667777777776662
Q ss_pred ---------------CCCceecCCCCCCEEeCC--CCCeEEeecCCccccccccccceeeccCccccccccccCC-----
Q 041878 654 ---------------EENMIHGNLTSSNVLLDE--KTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKL----- 711 (773)
Q Consensus 654 ---------------~~~iiH~Dik~~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~----- 711 (773)
...++|+|++|.||++++ ...+.++||+.+........-.... ....-..|+....
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~--~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLM--EDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTC--CTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHH--hhccccCHHHHHHHHHHc
Confidence 024799999999999998 4557899999886543211100000 0000012221100
Q ss_pred CCC---------CcchhhHHHHHHHHHHHcCCCCC
Q 041878 712 KNA---------NTKTDVYSLGVIILELLTGKSPG 737 (773)
Q Consensus 712 ~~~---------~~~~Dvws~Gv~l~el~tg~~P~ 737 (773)
+.. ....+.|+++.++|++.+|..+|
T Consensus 253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111 12368999999999999998775
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.76 E-value=2.6e-07 Score=99.65 Aligned_cols=274 Identities=9% Similarity=0.031 Sum_probs=158.3
Q ss_pred CccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCCCCCcccccccc
Q 041878 108 SEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALIGAIPPSLANST 187 (773)
Q Consensus 108 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 187 (773)
..++.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|+.+++..+- +......+.+.
T Consensus 62 ~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~- 135 (379)
T 4h09_A 62 EANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS- 135 (379)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-
T ss_pred HHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-ccccccccccc-
Confidence 345666666666666543 444445556655 4555555432 33222233433 356666665442 21222333332
Q ss_pred ccceeecccccccccCCccccCCCccceeeccccccccccCCccc-------ccccCcccccceeeccccccccccCccC
Q 041878 188 RLYRLNLSYNSLLGSIPLSLTRLPSLSVLALQHNNLSGSVPNNWG-------VLAGNKSYQLQFLNLDHNLIAGTIPVSL 260 (773)
Q Consensus 188 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-------~l~~~~~~~L~~L~L~~n~l~~~~~~~l 260 (773)
+|+.+.+..+ ++......+..+.+++.+.+..+........... .........+..+.+..+. .......+
T Consensus 136 ~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f 213 (379)
T 4h09_A 136 SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGF 213 (379)
T ss_dssp CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTT
T ss_pred eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeeccc
Confidence 4444444332 3323445566666777666655443211110000 0000111133333333222 22444566
Q ss_pred CCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEccCCCCCCCcchhhcccccccc
Q 041878 261 GKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTV 340 (773)
Q Consensus 261 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 340 (773)
....+|+.+.+..+ +.......|..+..|+.+.+..+ ++......|.++.+|+.+.+..+ +.......|..+.+|+.
T Consensus 214 ~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 214 SYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred ccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 67778888887655 33344567778888888888765 55555677888888888888654 54555567888888888
Q ss_pred ccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeec
Q 041878 341 LNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSY 393 (773)
Q Consensus 341 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 393 (773)
+.+.++.++......|.++.+|+.+.|..+ ++.....+|.++.+|+.+.+..
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 888888887666778888888988888755 6655567788888888876643
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.75 E-value=2.5e-10 Score=115.29 Aligned_cols=66 Identities=33% Similarity=0.409 Sum_probs=28.6
Q ss_pred CCCCCCEEEccCCCCCC--CCccccccccccceeecccccccccCCccccCCC--ccceeeccccccccccC
Q 041878 161 NCPNLQTLDLSNNALIG--AIPPSLANSTRLYRLNLSYNSLLGSIPLSLTRLP--SLSVLALQHNNLSGSVP 228 (773)
Q Consensus 161 ~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~--~L~~L~L~~N~l~~~~p 228 (773)
++++|++|+|++|.|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 34444444444444443 2233334444455555555544432 1112222 45555555555544333
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.60 E-value=1.7e-06 Score=93.23 Aligned_cols=275 Identities=9% Similarity=0.034 Sum_probs=175.7
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCcEEEccCCcccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEcc
Q 041878 92 QVIAIQLPWRRLGGRISEKISQLHALRKLSLHDNLLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLS 171 (773)
Q Consensus 92 ~v~~l~l~~~~l~~~i~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 171 (773)
.++.+.|+.+ ++..-..++.++ .|+.+.+..+ ++.....+|... +|+.+.+..+- +..-...|.+. +|+.+.+.
T Consensus 70 ~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~ 143 (379)
T 4h09_A 70 NMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGAT-TEIGNYIFYNS-SVKRIVIP 143 (379)
T ss_dssp TCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTTC-CEECTTTTTTC-CCCEEEEC
T ss_pred CCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCcc-ccccccccccc-eeeeeecc
Confidence 4666777543 443334556665 6778777653 554445566654 79999997653 32333344444 57776665
Q ss_pred CCCCCCCCccccccccccceeecccccccc------------cCCccccCCCccceeeccccccccccCCcccccccCcc
Q 041878 172 NNALIGAIPPSLANSTRLYRLNLSYNSLLG------------SIPLSLTRLPSLSVLALQHNNLSGSVPNNWGVLAGNKS 239 (773)
Q Consensus 172 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~------------~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~~ 239 (773)
.+ ++......+....+++.+.+..+.... .....+.....+..+.+..+.-. ..... ....
T Consensus 144 ~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~-----f~~~ 216 (379)
T 4h09_A 144 KS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYG-----FSYG 216 (379)
T ss_dssp TT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTT-----TTTC
T ss_pred ce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeecc-----cccc
Confidence 43 343445667777777777766543321 11222333444444443332211 11111 1223
Q ss_pred cccceeeccccccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceeccccccccccCcccccccccCceEEc
Q 041878 240 YQLQFLNLDHNLIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSYNAIGGSFPVTFTNITSLVSLNL 319 (773)
Q Consensus 240 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 319 (773)
.+|+.+.+..+ ++......+.++..|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++......|.++++|+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 46777777654 45566777888899999998776 55455677888889999988654 55455677888999999999
Q ss_pred cCCCCCCCcchhhccccccccccccCcccccccccccCCCCcCceeecCCccCccCCCchhhccC
Q 041878 320 ENNRLGNKIPEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDLSENDFTGEISPSLASLA 384 (773)
Q Consensus 320 s~N~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 384 (773)
.++.++......|.++.+|+.++|..+ ++.....+|.++.+|+.+.+..+ ++.....+|.++.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 988887777788999999999999755 66556678889999999988655 5544455665553
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=7.7e-09 Score=99.32 Aligned_cols=120 Identities=15% Similarity=0.178 Sum_probs=59.0
Q ss_pred ccCCCCCCccEEECCCC-cccCC----CCCCcCcccccceecccccccccc----CcccccccccCceEEccCCCCCCCc
Q 041878 258 VSLGKLGLLQEISLSHN-KIVGP----IPDELGKLSKLQKLDLSYNAIGGS----FPVTFTNITSLVSLNLENNRLGNKI 328 (773)
Q Consensus 258 ~~l~~l~~L~~L~L~~N-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~ 328 (773)
..+...++|++|+|++| .+... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|++..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34555666777777766 66532 222333344555555555555432 1222333344555555555444321
Q ss_pred chhhccccccccccccCcccccccccccCCCCcCceeec--CCccCccCCC----chhhccCccCEEEeecccCC
Q 041878 329 PEGLERLQNLTVLNLKNNQFKGHIPETIGNISGINQLDL--SENDFTGEIS----PSLASLANLTSFNVSYNNLS 397 (773)
Q Consensus 329 ~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L--~~N~l~~~~~----~~~~~l~~L~~L~ls~N~l~ 397 (773)
.. .+...+...++|++|+| ++|.+..... ..+...++|+.|+|++|.+.
T Consensus 110 ~~--------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 IL--------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HH--------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HH--------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 11 12344445556666666 5566654322 23333466777777776653
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.56 E-value=1.6e-08 Score=101.99 Aligned_cols=105 Identities=26% Similarity=0.379 Sum_probs=64.1
Q ss_pred cCcccccce--ecccccccc---ccCcccccccccCceEEccCCCCCC--CcchhhccccccccccccCccccccccccc
Q 041878 284 LGKLSKLQK--LDLSYNAIG---GSFPVTFTNITSLVSLNLENNRLGN--KIPEGLERLQNLTVLNLKNNQFKGHIPETI 356 (773)
Q Consensus 284 l~~l~~L~~--L~Ls~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~ 356 (773)
|...+.|.. ++++.|... +.+.....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 333344554 556666432 1222222456778888888888776 3456666777777777777777754 223
Q ss_pred CCCC--cCceeecCCccCccCCCc-------hhhccCccCEEE
Q 041878 357 GNIS--GINQLDLSENDFTGEISP-------SLASLANLTSFN 390 (773)
Q Consensus 357 ~~l~--~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~L~ 390 (773)
..+. +|++|+|++|++.+.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 778888888888776652 255667777664
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.53 E-value=7.7e-09 Score=99.30 Aligned_cols=111 Identities=23% Similarity=0.276 Sum_probs=82.6
Q ss_pred ccccceeecccc-ccccc----cCccCCCCCCccEEECCCCcccCC----CCCCcCcccccceecccccccccc----Cc
Q 041878 239 SYQLQFLNLDHN-LIAGT----IPVSLGKLGLLQEISLSHNKIVGP----IPDELGKLSKLQKLDLSYNAIGGS----FP 305 (773)
Q Consensus 239 ~~~L~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~~ 305 (773)
.++|++|+|++| .+... +...+...++|++|+|++|++... +...+...++|++|+|++|.|++. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 458999999999 88753 445567788999999999999753 334455668999999999999864 45
Q ss_pred ccccccccCceEEc--cCCCCCCCcch----hhccccccccccccCcccc
Q 041878 306 VTFTNITSLVSLNL--ENNRLGNKIPE----GLERLQNLTVLNLKNNQFK 349 (773)
Q Consensus 306 ~~~~~l~~L~~L~L--s~N~l~~~~~~----~l~~l~~L~~L~ls~N~l~ 349 (773)
..+...++|++|+| ++|.++..... .+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56677788999999 78888765433 3334466666666666654
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43 E-value=5.7e-07 Score=94.44 Aligned_cols=179 Identities=11% Similarity=0.132 Sum_probs=111.0
Q ss_pred hcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCC---C-ceEEeEEEEECCCCeEEEEEeecC
Q 041878 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHH---P-NLLALRAYYLGPKGEKLLVFDFMP 615 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h---~-niv~l~~~~~~~~~~~~lV~e~~~ 615 (773)
.+.++.|..+.||+. |+.+++|+.... .....+.+|.++++.+.+ + .+.+++++ +..++||||++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----~~~~lvme~i~ 110 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ-----SDRFNIMKYIK 110 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----CSSCEEEECCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec-----CCcEEEEeecC
Confidence 467899999999998 677888886422 224568899999998876 1 23344443 36689999999
Q ss_pred CCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc------------------------------------------
Q 041878 616 KGSLASFLHARGPETIVNWATRMSIAIGIARGLNYLHV------------------------------------------ 653 (773)
Q Consensus 616 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~------------------------------------------ 653 (773)
|.++.+.... .++..++..++.++++.+..||.
T Consensus 111 G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 111 GERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred Cccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 9888633211 13444455556666666666651
Q ss_pred --------------------CCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceeeccCccccccccccC---
Q 041878 654 --------------------EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSK--- 710 (773)
Q Consensus 654 --------------------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~--- 710 (773)
...++|+|++|.||+++.+..+.|+||+.+....+...-.... ........||...
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~l 264 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLL-DCSTDDFGKEFGRKVL 264 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHH-SCCTTSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHH-HhcccccCHHHHHHHH
Confidence 1235999999999999986667999999986543322211111 1111123333211
Q ss_pred -C-CC-----CCcchhhHHHHHHHHHHHcCCC
Q 041878 711 -L-KN-----ANTKTDVYSLGVIILELLTGKS 735 (773)
Q Consensus 711 -~-~~-----~~~~~Dvws~Gv~l~el~tg~~ 735 (773)
. .. ...+.+.|..-..+++++.|..
T Consensus 265 ~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 296 (320)
T 3r70_A 265 KYYQHKAPEVAERKAELNDVYWSIDQIIYGYE 296 (320)
T ss_dssp HHTTCSCHHHHHHHHHHHHHTHHHHHHHSSCT
T ss_pred HHHhccCcHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 0 01 1235677865555788888753
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=9.6e-07 Score=90.93 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=60.5
Q ss_pred hcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCC---ceEEeEEEEECCCCeEEEEEeecCC
Q 041878 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHP---NLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
.+.|+.|.++.||++...+|+.++||+...........|..|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----CcEEEEEeccc
Confidence 3578999999999999888999999997544333456789999999999875 467777653 36899999999
Q ss_pred CCH
Q 041878 617 GSL 619 (773)
Q Consensus 617 g~L 619 (773)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=1.8e-06 Score=89.92 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCC---ceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHP---NLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
+.++.|....||+. |..+++|.-. .......+..|+++++.+.+. .+.+.+.+.....+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888999988 5778888853 223456789999999999753 25566666644455688999999998
Q ss_pred CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 041878 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLH--------------------------------------------- 652 (773)
Q Consensus 618 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH--------------------------------------------- 652 (773)
++.+..-.. ++...+..++.++++.|..||
T Consensus 99 ~l~~~~~~~-----l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGMAV-----LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHHTT-----SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhhhh-----CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 876531110 122222223333333333332
Q ss_pred --------------cCCCceecCCCCCCEEeCC---CCCe-EEeecCCccccc
Q 041878 653 --------------VEENMIHGNLTSSNVLLDE---KTNP-RIADFGLSRLMT 687 (773)
Q Consensus 653 --------------~~~~iiH~Dik~~NIll~~---~~~~-kl~DfG~a~~~~ 687 (773)
....++|+|+++.||+++. ++.+ .|+||+.+..-.
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 1345799999999999987 4554 899999876543
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.15 E-value=9.7e-06 Score=82.69 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=90.1
Q ss_pred ccccccce-EEEEEEeC-CCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEECCCCeEEEEEeecCCCC
Q 041878 542 IMGKSTYG-TAYKATLE-DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVFDFMPKGS 618 (773)
Q Consensus 542 ~lG~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~lV~e~~~~g~ 618 (773)
.+..|..| .||+.... ++..+++|+-... ...++.+|...++.+. +--+.++++++. ..+..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIR-TPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEE-ETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEE-ECCeEEEEEEeeCCcc
Confidence 35556665 69998765 4667899986432 3567888999998885 223566777774 4458899999999988
Q ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhcc---------------------------------------------
Q 041878 619 LASFLHARGPETIVNWATRMSIAIGIARGLNYLHV--------------------------------------------- 653 (773)
Q Consensus 619 L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~--------------------------------------------- 653 (773)
+.+...... .....+..+++..+..||.
T Consensus 107 ~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 776544321 1112334444444444441
Q ss_pred ------------CCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 654 ------------EENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 654 ------------~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
...++|+|+.+.||++++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 01278999999999999877677999998754
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.10 E-value=5.7e-06 Score=88.23 Aligned_cols=141 Identities=9% Similarity=0.052 Sum_probs=89.2
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCc--eEEeEEEEECCCCeEEEEEeecCCCC
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN--LLALRAYYLGPKGEKLLVFDFMPKGS 618 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~lV~e~~~~g~ 618 (773)
+.++.|....+|+... +|..+++|..... ..+..|+.+++.+.... +.++++++....+..|+||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 5688999999999875 4788999987432 35888999999886533 45666666554467899999999765
Q ss_pred HHHH------------------HhhcCCCC--------------ccCHHHH------------------------HHHHH
Q 041878 619 LASF------------------LHARGPET--------------IVNWATR------------------------MSIAI 642 (773)
Q Consensus 619 L~~~------------------l~~~~~~~--------------~~~~~~~------------------------~~i~~ 642 (773)
+.+. +++..... .-.|... ...+.
T Consensus 121 l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 200 (362)
T 3ovc_A 121 LQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALD 200 (362)
T ss_dssp TTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHH
Confidence 5321 11111000 0011111 01112
Q ss_pred HHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccc
Q 041878 643 GIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMT 687 (773)
Q Consensus 643 ~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~ 687 (773)
.+..-+..+.....++|+|+.+.||++++++.+.|+||+.+..-.
T Consensus 201 ~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 201 ELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 222222222222568999999999999877778899999887543
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.06 E-value=1.3e-06 Score=81.58 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=47.8
Q ss_pred ccceeccccccccccCcccccccccCceEEccCCC-CCCCcchhhccc----cccccccccCcc-cccccccccCCCCcC
Q 041878 289 KLQKLDLSYNAIGGSFPVTFTNITSLVSLNLENNR-LGNKIPEGLERL----QNLTVLNLKNNQ-FKGHIPETIGNISGI 362 (773)
Q Consensus 289 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l----~~L~~L~ls~N~-l~~~~~~~~~~l~~L 362 (773)
+|+.||++++.++..--..+..+++|++|+|++|. +++..-..++.+ ++|++|+|++|. +++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56666666666655444555666666666666664 555444445543 356666666653 555444445556666
Q ss_pred ceeecCCcc
Q 041878 363 NQLDLSEND 371 (773)
Q Consensus 363 ~~L~L~~N~ 371 (773)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666554
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=4.8e-06 Score=88.81 Aligned_cols=80 Identities=6% Similarity=0.002 Sum_probs=54.2
Q ss_pred ccc-ccccceEEEEEEeC-------CCCEEEEEEecccC---cccHHHHHHHHHHHHccCC---CceEEeEEEEECCC--
Q 041878 541 EIM-GKSTYGTAYKATLE-------DGSEVAVKRLREKT---TKGQKEFEAEAAAIGKIHH---PNLLALRAYYLGPK-- 604 (773)
Q Consensus 541 ~~l-G~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~-- 604 (773)
+.| +.|....+|+.... ++..+++|...... ......+.+|+.+++.+.. -.+.+++.++....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 557 88889999998754 26678888865432 1112457788888888753 24667777763332
Q ss_pred CeEEEEEeecCCCCHH
Q 041878 605 GEKLLVFDFMPKGSLA 620 (773)
Q Consensus 605 ~~~~lV~e~~~~g~L~ 620 (773)
+..++||||++|.++.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.98 E-value=1.8e-06 Score=80.63 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=76.3
Q ss_pred cccccccccCceEEccCCCCCCCcchhhccccccccccccCcc-cccccccccCCC----CcCceeecCCcc-CccCCCc
Q 041878 305 PVTFTNITSLVSLNLENNRLGNKIPEGLERLQNLTVLNLKNNQ-FKGHIPETIGNI----SGINQLDLSEND-FTGEISP 378 (773)
Q Consensus 305 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ls~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~ 378 (773)
|.....-.+|++||++++.+++..-..+..+++|+.|+|++|. +++..-..+..+ ++|++|+|++|. ++...-.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4333333589999999999998888889999999999999995 887766777765 489999999985 8877677
Q ss_pred hhhccCccCEEEeeccc
Q 041878 379 SLASLANLTSFNVSYNN 395 (773)
Q Consensus 379 ~~~~l~~L~~L~ls~N~ 395 (773)
.+..+++|+.|+|+++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 78899999999999986
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.77 E-value=6.3e-05 Score=81.32 Aligned_cols=74 Identities=8% Similarity=0.036 Sum_probs=48.6
Q ss_pred cccccccceEEEEEEeC-CCCEEEEEEecccCc-------ccHHHHHHHHHHHHccCC--C-ceEEeEEEEECCCCeEEE
Q 041878 541 EIMGKSTYGTAYKATLE-DGSEVAVKRLREKTT-------KGQKEFEAEAAAIGKIHH--P-NLLALRAYYLGPKGEKLL 609 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~~l 609 (773)
+.+|.|.++.||++... +++.++||....... .....+..|+++++.+.. + .+.+++.+. .+..++
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d---~~~~~l 112 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD---TEMAVT 112 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE---TTTTEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc---CCccEE
Confidence 56899999999999764 468899998653221 123456778888887743 3 344555432 234689
Q ss_pred EEeecCCC
Q 041878 610 VFDFMPKG 617 (773)
Q Consensus 610 V~e~~~~g 617 (773)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.77 E-value=4e-05 Score=80.95 Aligned_cols=140 Identities=16% Similarity=0.258 Sum_probs=78.8
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCC--CceEEeEEE-----EECCCCeEEEEEee
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHH--PNLLALRAY-----YLGPKGEKLLVFDF 613 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~-----~~~~~~~~~lV~e~ 613 (773)
+.|+.|..+.||+....+| .+++|+.... ..++..|+.+++.+.. -.+.+++.. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677889999987654 5889988642 2344455555555531 122333321 11124467899999
Q ss_pred cCCCCHH--------------HHHhhcC-----CC------CccCHHHH-------------------------------
Q 041878 614 MPKGSLA--------------SFLHARG-----PE------TIVNWATR------------------------------- 637 (773)
Q Consensus 614 ~~~g~L~--------------~~l~~~~-----~~------~~~~~~~~------------------------------- 637 (773)
++|.++. ..++... +. ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986432 1122111 10 01123211
Q ss_pred HHHHHHHHHHHHHhc------------cCCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 638 MSIAIGIARGLNYLH------------VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 638 ~~i~~~i~~al~yLH------------~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
..+..++..++++|+ ....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011122334566664 147799999999999998888899999998754
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.63 E-value=0.00015 Score=74.48 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=56.3
Q ss_pred hcccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCC---ceEEeEEEEECCCCeEEEEEeecCC
Q 041878 540 AEIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHP---NLLALRAYYLGPKGEKLLVFDFMPK 616 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~lV~e~~~~ 616 (773)
.+.+|.|..+.||+.+..||+.|++|+-..........|..|++.|+.+.-. -+.+++++. ..++||||+++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----~~~lv~e~l~~ 94 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----CceEEEEeecc
Confidence 3568999999999999999999999987655444456788999999988522 244444432 34789999987
Q ss_pred CCH
Q 041878 617 GSL 619 (773)
Q Consensus 617 g~L 619 (773)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.60 E-value=7.4e-06 Score=78.01 Aligned_cols=64 Identities=22% Similarity=0.253 Sum_probs=28.7
Q ss_pred CCCccEEECCCC-cccCC----CCCCcCcccccceecccccccccc----CcccccccccCceEEccCCCCCC
Q 041878 263 LGLLQEISLSHN-KIVGP----IPDELGKLSKLQKLDLSYNAIGGS----FPVTFTNITSLVSLNLENNRLGN 326 (773)
Q Consensus 263 l~~L~~L~L~~N-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 326 (773)
-+.|++|+|++| ++... +.+.+...+.|+.|+|++|+|++. +...+...+.|++|+|++|.|++
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 344555555553 44321 222333344555555555555432 22223334455555555555543
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.58 E-value=1.5e-05 Score=75.82 Aligned_cols=112 Identities=13% Similarity=0.183 Sum_probs=75.5
Q ss_pred cCcccccceeccccc-cccc----cCcccccccccCceEEccCCCCCCCcch----hhccccccccccccCcccccc---
Q 041878 284 LGKLSKLQKLDLSYN-AIGG----SFPVTFTNITSLVSLNLENNRLGNKIPE----GLERLQNLTVLNLKNNQFKGH--- 351 (773)
Q Consensus 284 l~~l~~L~~L~Ls~N-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~----~l~~l~~L~~L~ls~N~l~~~--- 351 (773)
+.+-+.|+.|+|++| +|.. .+...+...+.|+.|+|++|+|++.... .+..-+.|+.|+|++|.|.+.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344568888999885 7764 2344566678899999999998765443 444567888888888888753
Q ss_pred -cccccCCCCcCceeecCCc---cCccC----CCchhhccCccCEEEeeccc
Q 041878 352 -IPETIGNISGINQLDLSEN---DFTGE----ISPSLASLANLTSFNVSYNN 395 (773)
Q Consensus 352 -~~~~~~~l~~L~~L~L~~N---~l~~~----~~~~~~~l~~L~~L~ls~N~ 395 (773)
+.+.+..-+.|++|+|++| .+... +...+..-+.|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 4445666677888888765 33322 22334445678888887664
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.53 E-value=0.00011 Score=79.92 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=50.2
Q ss_pred CCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceeeccCccccccccccCCC---CCCcchhhHHHHHHHHHH
Q 041878 654 EENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLK---NANTKTDVYSLGVIILEL 730 (773)
Q Consensus 654 ~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dvws~Gv~l~el 730 (773)
...++|+|+++.|||++.++ ++++||+.+..-.....-......-...|++|+..... ......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 67899999999999998876 99999998875432211100000011346666654321 112245666888888888
Q ss_pred HcCC
Q 041878 731 LTGK 734 (773)
Q Consensus 731 ~tg~ 734 (773)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.33 E-value=0.0013 Score=67.98 Aligned_cols=135 Identities=18% Similarity=0.171 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccC---CCceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH---HPNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
+.|+.|.+..+|+... ++..+++|+.... ....+..|++.|+.+. ...+.+++++.. ..+..++||||+++.
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-SQGHSFLLLEALNKS 116 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-CSSEEEEEEECCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-cCCceEEEEEeccCC
Confidence 5688999999999986 4678889987532 3567889999998885 245777777774 346899999999987
Q ss_pred CHH--------H---HHhhcCC-C------------------CccCHHHHH---HHHH----------------HHHHH-
Q 041878 618 SLA--------S---FLHARGP-E------------------TIVNWATRM---SIAI----------------GIARG- 647 (773)
Q Consensus 618 ~L~--------~---~l~~~~~-~------------------~~~~~~~~~---~i~~----------------~i~~a- 647 (773)
.+. . .++.... . -.-+|.... ++.. .++..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 542 1 1232221 0 012454321 1111 11111
Q ss_pred HHHhc---cCCCceecCCCCCCEEeCCCCCeEEeecC
Q 041878 648 LNYLH---VEENMIHGNLTSSNVLLDEKTNPRIADFG 681 (773)
Q Consensus 648 l~yLH---~~~~iiH~Dik~~NIll~~~~~~kl~DfG 681 (773)
...|. ....+||+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 12332 135699999999999999887 8999984
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.95 E-value=0.0036 Score=65.52 Aligned_cols=140 Identities=9% Similarity=0.082 Sum_probs=72.6
Q ss_pred cccccccceE-EEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCC--CceEEeEEEEECCCCeEEEEEeecCCC
Q 041878 541 EIMGKSTYGT-AYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHH--PNLLALRAYYLGPKGEKLLVFDFMPKG 617 (773)
Q Consensus 541 ~~lG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~lV~e~~~~g 617 (773)
+.|+.|+... +|+....+|..+++|....... .++..|+.+++.+.. -.+.+++.+. ...+ ++|||++++.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d-~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEE-HARG--LLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEE-TTTT--EEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeec-CCCC--EEEEeeCCCc
Confidence 3455555554 6677654477787776543221 233456666666542 2244555554 3333 7899999877
Q ss_pred CHHHHHhhcC---------------------CC--CccCHHHHH--------------------HHHHHHHHHHHHh---
Q 041878 618 SLASFLHARG---------------------PE--TIVNWATRM--------------------SIAIGIARGLNYL--- 651 (773)
Q Consensus 618 ~L~~~l~~~~---------------------~~--~~~~~~~~~--------------------~i~~~i~~al~yL--- 651 (773)
.+.+++.... .. ..++..... .....+...++.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 7665443210 00 011111000 0001111222222
Q ss_pred --ccCCCceecCCCCCCEEeCCC----CCeEEeecCCcccc
Q 041878 652 --HVEENMIHGNLTSSNVLLDEK----TNPRIADFGLSRLM 686 (773)
Q Consensus 652 --H~~~~iiH~Dik~~NIll~~~----~~~kl~DfG~a~~~ 686 (773)
.....++|||+.+.|||++.+ +.+.|+||+.+..-
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 114579999999999999875 67899999988654
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.86 E-value=0.0032 Score=65.70 Aligned_cols=140 Identities=16% Similarity=0.188 Sum_probs=80.5
Q ss_pred ccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCc--eEEeEEE----EECCCCeEEEEEeecC
Q 041878 542 IMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN--LLALRAY----YLGPKGEKLLVFDFMP 615 (773)
Q Consensus 542 ~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~----~~~~~~~~~lV~e~~~ 615 (773)
.++ |....||+....+|+.+++|...... ....++..|..+++.+.... +.+++.. .....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 456 77788999887778889999986332 23556777888887775222 3334332 0011346688999998
Q ss_pred CCCHH-----HH---------HhhcC---C---CCccCHHHH----------------------HHHHHHHHHHHHHhc-
Q 041878 616 KGSLA-----SF---------LHARG---P---ETIVNWATR----------------------MSIAIGIARGLNYLH- 652 (773)
Q Consensus 616 ~g~L~-----~~---------l~~~~---~---~~~~~~~~~----------------------~~i~~~i~~al~yLH- 652 (773)
|..+. .+ ++... . ....++... ...+.+++..+.-+-
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75321 11 11110 0 111222111 011112222222221
Q ss_pred --cCCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 653 --VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 653 --~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
....++|+|+++.||+++ + .+.++||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 135689999999999999 4 899999988754
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.68 E-value=0.003 Score=55.98 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=27.0
Q ss_pred CCCceEEcccCccCCCCCCCCCCCCCCCEEEccCCCCC
Q 041878 139 PNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSNNALI 176 (773)
Q Consensus 139 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 176 (773)
++|++|+|++|+|+..-+..|..+++|++|+|++|.+.
T Consensus 31 ~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 31 VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 35677777777777555566677777777777777764
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.67 E-value=0.0011 Score=68.40 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=73.4
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCce-EEeEEEEECCCCeEEEEEeec-CCCC
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNL-LALRAYYLGPKGEKLLVFDFM-PKGS 618 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~lV~e~~-~~g~ 618 (773)
+.|+.|....+|+. ..+++|+....... ..+...|+.+++.+....+ .+++++. .+.-++|+||+ ++.+
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~---~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD---PATGVMVTRYIAGAQT 94 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC---TTTCCEEEECCTTCEE
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE---CCCCEEEEeecCCCcc
Confidence 56888999999999 56888887643221 1223557777777643222 3444433 22357899999 6544
Q ss_pred HHH------------------HHhhcCCC--CccCHHH-H---------------------HHHHHHHHHHHHHhccCCC
Q 041878 619 LAS------------------FLHARGPE--TIVNWAT-R---------------------MSIAIGIARGLNYLHVEEN 656 (773)
Q Consensus 619 L~~------------------~l~~~~~~--~~~~~~~-~---------------------~~i~~~i~~al~yLH~~~~ 656 (773)
+.. -++..... ...+... . ...+..+...+.-......
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 421 01111110 0011111 1 1111111111111111345
Q ss_pred ceecCCCCCCEEeCCCCCeEEeecCCcccc
Q 041878 657 MIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 657 iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 686 (773)
++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56677899999987643
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.62 E-value=0.0046 Score=67.16 Aligned_cols=71 Identities=10% Similarity=0.159 Sum_probs=48.2
Q ss_pred cccccccceEEEEEEeCC--------CCEEEEEEecccCcccHHHHHHHHHHHHccCCCce-EEeEEEEECCCCeEEEEE
Q 041878 541 EIMGKSTYGTAYKATLED--------GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNL-LALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~lV~ 611 (773)
+.|+.|....||++...+ +..+++|+.... .....+..|..+++.+...++ .++++.+ . . .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-~-~---g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-S-G---GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-T-T---EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-C-C---CEEE
Confidence 567888889999998653 478999988432 112455678888888753333 5666655 2 2 3899
Q ss_pred eecCCCC
Q 041878 612 DFMPKGS 618 (773)
Q Consensus 612 e~~~~g~ 618 (773)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998633
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.60 E-value=0.0022 Score=56.77 Aligned_cols=60 Identities=15% Similarity=0.201 Sum_probs=44.3
Q ss_pred cccccCcccc-cccccccCCCCcCceeecCCccCccCCCchhhccCccCEEEeecccCCCCCc
Q 041878 340 VLNLKNNQFK-GHIPETIGNISGINQLDLSENDFTGEISPSLASLANLTSFNVSYNNLSGSVP 401 (773)
Q Consensus 340 ~L~ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~g~~p 401 (773)
.++.+++.++ ..+|..+ -++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.+..-
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5666666665 2445432 2368889999999987667778889999999999999987654
No 439
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.57 E-value=0.002 Score=67.03 Aligned_cols=142 Identities=11% Similarity=0.144 Sum_probs=77.6
Q ss_pred cccccccceEEEEEEeCCCCEEEEEEecccCcccHHHHHHHHHHHHccCCCc--eEEeEEEE-----ECCCCeEEEEEee
Q 041878 541 EIMGKSTYGTAYKATLEDGSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN--LLALRAYY-----LGPKGEKLLVFDF 613 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~-----~~~~~~~~lV~e~ 613 (773)
+.|+.|....+|+....+| .+++|...... ...++..|+.+++.+.... +.+++... ....+..++|+||
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577888899999987655 68889886531 2234566777777664222 22332110 0112467899999
Q ss_pred cCCCCHHH--------------HHhhcC----CC-----CccCHHHHHH------------HHHHHHHHHHHhc------
Q 041878 614 MPKGSLAS--------------FLHARG----PE-----TIVNWATRMS------------IAIGIARGLNYLH------ 652 (773)
Q Consensus 614 ~~~g~L~~--------------~l~~~~----~~-----~~~~~~~~~~------------i~~~i~~al~yLH------ 652 (773)
++|..+.. .++... .. ....|..... +...+.+.+++++
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99864311 112111 00 0011222110 0011333444443
Q ss_pred cCCCceecCCCCCCEEeCCCCCeEEeecCCccc
Q 041878 653 VEENMIHGNLTSSNVLLDEKTNPRIADFGLSRL 685 (773)
Q Consensus 653 ~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~ 685 (773)
...+++|+|+.+.||+++++..+.++||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 124699999999999998876568999998764
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.40 E-value=0.0094 Score=63.27 Aligned_cols=140 Identities=14% Similarity=0.152 Sum_probs=81.5
Q ss_pred cccccccceEEEEEEeC--------CCCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEECCCCeEEEEE
Q 041878 541 EIMGKSTYGTAYKATLE--------DGSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~lV~ 611 (773)
+.+..|-...+|+.... +++.+++|+.... ......+.+|.++++.+. +.-..++++++ . . .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-~-~---g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVF-P-E---GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-T-T---EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc-C-C---ccEE
Confidence 45777888889999864 2478999986432 234566778999998885 32235566655 2 2 3899
Q ss_pred eecCCCCHHH--------------H---HhhcCC--CCccC--HHHHHHHHHHHHH-------------------HHHHh
Q 041878 612 DFMPKGSLAS--------------F---LHARGP--ETIVN--WATRMSIAIGIAR-------------------GLNYL 651 (773)
Q Consensus 612 e~~~~g~L~~--------------~---l~~~~~--~~~~~--~~~~~~i~~~i~~-------------------al~yL 651 (773)
||++|.++.. . ++.... ..... +.+..++..++.. .+.+|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999754421 0 111110 11122 3444444433321 12222
Q ss_pred ----c---cCCCceecCCCCCCEEeCCC----CCeEEeecCCcccc
Q 041878 652 ----H---VEENMIHGNLTSSNVLLDEK----TNPRIADFGLSRLM 686 (773)
Q Consensus 652 ----H---~~~~iiH~Dik~~NIll~~~----~~~kl~DfG~a~~~ 686 (773)
. ....++|+|+.+.||+++.+ +.+.++||..+..-
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~ 255 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN 255 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence 2 12358999999999999876 68999999988643
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.31 E-value=0.0039 Score=66.37 Aligned_cols=72 Identities=6% Similarity=0.018 Sum_probs=43.3
Q ss_pred cccccccceEEEEEEeCC---------CCEEEEEEecccCcccHHHHHHHHHHHHccCCCc-eEEeEEEEECCCCeEEEE
Q 041878 541 EIMGKSTYGTAYKATLED---------GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPN-LLALRAYYLGPKGEKLLV 610 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~lV 610 (773)
+.++.|....+|+....+ +..+++|+....... ..+...|.++++.+.... +.++++.. . -++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~---~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N---GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C---CcEE
Confidence 457788888999998654 268888887543221 123466888887775333 34555443 1 3789
Q ss_pred EeecCCCC
Q 041878 611 FDFMPKGS 618 (773)
Q Consensus 611 ~e~~~~g~ 618 (773)
|||++|.+
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.08 E-value=0.023 Score=62.04 Aligned_cols=73 Identities=14% Similarity=0.113 Sum_probs=46.8
Q ss_pred cccccccceEEEEEEeCC-CCEEEEEEecccCcccHHHHHHHHHHHHccCCCce-EEeEEEEECCCCeEEEEEeecCCCC
Q 041878 541 EIMGKSTYGTAYKATLED-GSEVAVKRLREKTTKGQKEFEAEAAAIGKIHHPNL-LALRAYYLGPKGEKLLVFDFMPKGS 618 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~lV~e~~~~g~ 618 (773)
+.|+.|-...+|+....+ +..+++|+....... .-+..+|..+++.+...++ .++++.+ . . .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~-~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF-T-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE-T-T---EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe-C-C---eEEEEeeCCcc
Confidence 568888889999998765 477888887543221 1122578888888865444 4666665 2 2 35999998744
Q ss_pred H
Q 041878 619 L 619 (773)
Q Consensus 619 L 619 (773)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.23 E-value=0.051 Score=56.80 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=28.1
Q ss_pred CCceecCCCCCCEEeCCCCCeEEeecCCcccc
Q 041878 655 ENMIHGNLTSSNVLLDEKTNPRIADFGLSRLM 686 (773)
Q Consensus 655 ~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~ 686 (773)
..++|+|+.+.||++++++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 56999999999999998888999999887653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.14 E-value=0.055 Score=57.61 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=79.8
Q ss_pred cccccccceEEEEEEeCC--------CCEEEEEEecccCcc-----------c-------HHHHHHHHHHHHccC-CCce
Q 041878 541 EIMGKSTYGTAYKATLED--------GSEVAVKRLREKTTK-----------G-------QKEFEAEAAAIGKIH-HPNL 593 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~ni 593 (773)
+.|..|-...+|+....+ +..|.+++....... + .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788899988653 367888887543221 0 112234888888775 3334
Q ss_pred EEeEEEEECCCCeEEEEEeecCCCCHH--HH---------------HhhcC--CCCccC--HHHHHHHHHHHH-------
Q 041878 594 LALRAYYLGPKGEKLLVFDFMPKGSLA--SF---------------LHARG--PETIVN--WATRMSIAIGIA------- 645 (773)
Q Consensus 594 v~l~~~~~~~~~~~~lV~e~~~~g~L~--~~---------------l~~~~--~~~~~~--~~~~~~i~~~i~------- 645 (773)
.++++++ . . .+|+||+++-+|. ++ ++... ...... +....++..++.
T Consensus 138 Pkl~~~~-~-~---G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 138 PKLYGIF-P-Q---GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp CCEEEEE-T-T---EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CeEEEEe-C-C---CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5666665 2 2 3899999964432 11 11111 011122 223333332221
Q ss_pred ---------------HHH----HHhc---cCCCceecCCCCCCEEeCCC------CCeEEeecCCccc
Q 041878 646 ---------------RGL----NYLH---VEENMIHGNLTSSNVLLDEK------TNPRIADFGLSRL 685 (773)
Q Consensus 646 ---------------~al----~yLH---~~~~iiH~Dik~~NIll~~~------~~~kl~DfG~a~~ 685 (773)
.-+ ++|. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 2222 12458999999999999887 7899999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.71 E-value=0.08 Score=56.95 Aligned_cols=72 Identities=6% Similarity=0.037 Sum_probs=47.1
Q ss_pred cccccccceEEEEEEeCC--------CCEEEEEEecccCcccHHHHHHHHHHHHccC-CCceEEeEEEEECCCCeEEEEE
Q 041878 541 EIMGKSTYGTAYKATLED--------GSEVAVKRLREKTTKGQKEFEAEAAAIGKIH-HPNLLALRAYYLGPKGEKLLVF 611 (773)
Q Consensus 541 ~~lG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~lV~ 611 (773)
+.+..|-...+|+....+ ++.+++|+...... ..-+..+|..+++.+. +.-..++++.+ . -++|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~--~---~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF--P---EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc--C---CCEEE
Confidence 457778888999998653 57889988754322 2223456888888775 32234555543 2 37899
Q ss_pred eecCCCC
Q 041878 612 DFMPKGS 618 (773)
Q Consensus 612 e~~~~g~ 618 (773)
||++|.+
T Consensus 150 efI~G~~ 156 (424)
T 3mes_A 150 EFIDGEP 156 (424)
T ss_dssp ECCCSEE
T ss_pred EEeCCcc
Confidence 9999865
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.42 E-value=0.84 Score=48.69 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=25.5
Q ss_pred ceecCCCCCCEEe------CCCCCeEEeecCCcccc
Q 041878 657 MIHGNLTSSNVLL------DEKTNPRIADFGLSRLM 686 (773)
Q Consensus 657 iiH~Dik~~NIll------~~~~~~kl~DfG~a~~~ 686 (773)
++|+|+.+.||++ +++..++++||..|..-
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 6799999999999 45667999999988653
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=90.04 E-value=1.1 Score=42.74 Aligned_cols=102 Identities=17% Similarity=0.098 Sum_probs=68.4
Q ss_pred CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCEEeCCCCCeEEeecCCccccccccccceeec
Q 041878 618 SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNVLLDEKTNPRIADFGLSRLMTAAANTNVIAT 697 (773)
Q Consensus 618 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 697 (773)
+|.+.|+..+ ..++..+++.++.|.+.+|.-.-..+.-..+=+.|..|++..+|.+...+ ..+.
T Consensus 34 SL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999998874 56999999999999999987762011112344567899999999988764 2111
Q ss_pred cCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCC
Q 041878 698 AGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSP 736 (773)
Q Consensus 698 ~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P 736 (773)
.....+.|||... ...+.+.=|||+|+++|..+-=..|
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122466888653 3456788899999999999986665
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.83 E-value=0.75 Score=31.31 Aligned_cols=6 Identities=17% Similarity=0.213 Sum_probs=2.5
Q ss_pred ehhhHH
Q 041878 461 GVGALL 466 (773)
Q Consensus 461 ~~~~~~ 466 (773)
+.+++.
T Consensus 14 A~gVVg 19 (44)
T 2ks1_B 14 ATGMVG 19 (44)
T ss_dssp THHHHH
T ss_pred EeehhH
Confidence 344443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.34 E-value=0.94 Score=30.76 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=4.4
Q ss_pred HHHhhhhcccc
Q 041878 477 LFCLMRKRSAS 487 (773)
Q Consensus 477 ~~~~~rrr~~~ 487 (773)
+|+++|||+++
T Consensus 30 ~~~~~RRRr~~ 40 (44)
T 2l2t_A 30 FAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHTTCSS
T ss_pred HHHHhhhhhhh
Confidence 33444444333
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.37 E-value=1.1 Score=30.29 Aligned_cols=7 Identities=29% Similarity=0.748 Sum_probs=2.7
Q ss_pred Hhhhhcc
Q 041878 479 CLMRKRS 485 (773)
Q Consensus 479 ~~~rrr~ 485 (773)
.+.|||+
T Consensus 33 ~~~RRR~ 39 (44)
T 2jwa_A 33 ILIKRRQ 39 (44)
T ss_dssp HHHHHHC
T ss_pred hheehhh
Confidence 3334433
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.10 E-value=4.5 Score=38.42 Aligned_cols=116 Identities=9% Similarity=0.121 Sum_probs=74.8
Q ss_pred CCCceEEeEEEEECCCCeEEEEEeecCCC-CHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHhccCCCceecCCCCCCE
Q 041878 589 HHPNLLALRAYYLGPKGEKLLVFDFMPKG-SLASFLHARGPETIVNWATRMSIAIGIARGLNYLHVEENMIHGNLTSSNV 667 (773)
Q Consensus 589 ~h~niv~l~~~~~~~~~~~~lV~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~iiH~Dik~~NI 667 (773)
.||+.++. .+- ...+...+.|+.-+.+ ++.. ++. .+...+++++.+|+....+++ . =+|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~-e~eD~v~~~y~~~~~~~~f~~-ik~------~~~~eKlr~l~ni~~l~~~~~-~--r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELT-ELRDSFQIHYDINDNHTPFDN-IKS------FTKNEKLRYLLNIKNLEEVNR-T--RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEE-ECSSEEEEEECCCTTSEEGGG-GGG------SCHHHHHHHHHHGGGGGGGGG-S--SEECCCSGGGE
T ss_pred cCCcccce-EEE-EcccEEEEEEEcCcccCCHHH-HHh------cCHHHHHHHHHHHHHHHHHhc-C--ceEEEEecceE
Confidence 57877755 333 3344555555544322 2222 222 577889999999999886666 3 36778999999
Q ss_pred EeCCCCCeEEeecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 668 LLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 668 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
+++.++.+++.=.|+...+ +|. ..++..=.-.+=+++..+++++..|+.
T Consensus 111 ~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999877754322 222 111122233466788889999888765
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.85 E-value=1.4 Score=29.99 Aligned_cols=17 Identities=41% Similarity=0.454 Sum_probs=8.4
Q ss_pred ceEEeehhhHHHHHHHH
Q 041878 456 DIILIGVGALLAVLLIL 472 (773)
Q Consensus 456 ~~i~i~~~~~~~~l~~~ 472 (773)
.++..+++.++++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~ 28 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVA 28 (44)
T ss_dssp SSTHHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHHH
Confidence 34555566545444443
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.56 E-value=0.34 Score=52.83 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=16.8
Q ss_pred hcccccccceEEEEEEeCC-CCEEEE------EEecccC--cccHHHHHHHHHHHHccCCCceEEeEEEEE
Q 041878 540 AEIMGKSTYGTAYKATLED-GSEVAV------KRLREKT--TKGQKEFEAEAAAIGKIHHPNLLALRAYYL 601 (773)
Q Consensus 540 ~~~lG~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 601 (773)
.+.+| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|+|+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 35566 99999998764 467888 7766432 223356888999999999999999877763
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=72.62 E-value=1.1 Score=29.50 Aligned_cols=20 Identities=30% Similarity=0.504 Sum_probs=9.5
Q ss_pred CCccceEEeehhhHHHHHHH
Q 041878 452 LSTKDIILIGVGALLAVLLI 471 (773)
Q Consensus 452 ~~~~~~i~i~~~~~~~~l~~ 471 (773)
.+...+..+++++++++.++
T Consensus 8 ls~GaIAGiVvG~v~gv~li 27 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALL 27 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHH
Confidence 34444544555555444443
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=71.50 E-value=1.6 Score=29.57 Aligned_cols=24 Identities=8% Similarity=0.055 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhcccc
Q 041878 464 ALLAVLLILCCILLFCLMRKRSAS 487 (773)
Q Consensus 464 ~~~~~l~~~~~~~~~~~~rrr~~~ 487 (773)
+++.+++++...+++.++|+++++
T Consensus 20 v~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred HHHHHHHHHHHHHHhhhhhhhhcc
Confidence 444445556677777777666654
No 456
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=67.32 E-value=19 Score=34.21 Aligned_cols=116 Identities=11% Similarity=0.108 Sum_probs=73.1
Q ss_pred CCCceEEeEEEEECCCCeEEEEEeecCCCCHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH-HhccCCCceecCCCCCCE
Q 041878 589 HHPNLLALRAYYLGPKGEKLLVFDFMPKGSLASFLHARGPETIVNWATRMSIAIGIARGLN-YLHVEENMIHGNLTSSNV 667 (773)
Q Consensus 589 ~h~niv~l~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~-yLH~~~~iiH~Dik~~NI 667 (773)
.||++ .. .+- ...+...+.++.-+++.=...++. .+...+++++.+|+.... +++ .-+|--++|+|+
T Consensus 48 ~~~~f-~~-~I~-~~eD~~~i~y~~~~~~~~f~~i~~------~~~~eKlrll~nl~~L~~~~~~---~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI-VR-DID-VSEDEVKVVIKPPSSFLTFAAIRK------TTLLSRIRAAIHLVSKVKHHSA---RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS-EE-EEE-ECSSEEEEEEECCTTCEEHHHHHT------SCHHHHHHHHHHHHHHHSSCCS---SSEECCCCGGGE
T ss_pred cCCCC-Ce-EEE-EeCCEEEEEEEcCcccCcHHHHHh------cCHHHHHHHHHHHHHHHHHhhh---CceeEEEeCceE
Confidence 57777 22 222 344566666666544433333433 577889999999998877 555 347788999999
Q ss_pred EeCCCCCeEEeecCCccccccccccceeeccCccccccccccCCCCCCcchhhHHHHHHHHHHHcCCCCCCC
Q 041878 668 LLDEKTNPRIADFGLSRLMTAAANTNVIATAGTLGYRAPELSKLKNANTKTDVYSLGVIILELLTGKSPGEP 739 (773)
Q Consensus 668 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws~Gv~l~el~tg~~P~~~ 739 (773)
+++.++.+++.=.|+-..+ +|.- .++.-=.-.+=+++..++.++..|+.
T Consensus 116 ~f~~~~~p~i~hRGi~~~l------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTTB------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCcccC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999877754322 2221 11111123455677777888777654
No 457
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=61.94 E-value=2.1 Score=28.71 Aligned_cols=12 Identities=33% Similarity=0.445 Sum_probs=5.2
Q ss_pred ehhhHHHHHHHH
Q 041878 461 GVGALLAVLLIL 472 (773)
Q Consensus 461 ~~~~~~~~l~~~ 472 (773)
+.+++.++++++
T Consensus 16 ~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 16 IGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EeehhHHHHHHH
Confidence 344444444433
No 458
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.27 E-value=6 Score=26.79 Aligned_cols=30 Identities=30% Similarity=0.276 Sum_probs=19.1
Q ss_pred eEEeehhhHHHHHHHHHHHHHHHhhhhccc
Q 041878 457 IILIGVGALLAVLLILCCILLFCLMRKRSA 486 (773)
Q Consensus 457 ~i~i~~~~~~~~l~~~~~~~~~~~~rrr~~ 486 (773)
++.+++|+++.+++.+.+++++.++|.+++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhhcc
Confidence 344455655666666667778888776654
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.16 E-value=34 Score=27.89 Aligned_cols=45 Identities=16% Similarity=0.126 Sum_probs=22.9
Q ss_pred ccccCCCCCCCCCCCceEEcccCccCCCCCCCCCCCCCCCEEEccC
Q 041878 127 LAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPNLQTLDLSN 172 (773)
Q Consensus 127 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 172 (773)
++.+-..+|.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344455555666666655543 3323344555555555555543
No 460
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=38.10 E-value=29 Score=25.54 Aligned_cols=18 Identities=22% Similarity=0.392 Sum_probs=8.8
Q ss_pred eehhhHHHHHHHHHHHHH
Q 041878 460 IGVGALLAVLLILCCILL 477 (773)
Q Consensus 460 i~~~~~~~~l~~~~~~~~ 477 (773)
+++|.++++++++.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 445555555555444444
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.14 E-value=69 Score=25.97 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=27.6
Q ss_pred ccccccCccCCCCCCccEEECCCCcccCCCCCCcCcccccceecccc
Q 041878 251 LIAGTIPVSLGKLGLLQEISLSHNKIVGPIPDELGKLSKLQKLDLSY 297 (773)
Q Consensus 251 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 297 (773)
.++.+...+|.++++|+.+.|-.+ ++..-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344455566777777777776654 3334445666666666666654
No 462
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=25.13 E-value=44 Score=19.07 Aligned_cols=23 Identities=39% Similarity=0.438 Sum_probs=10.3
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhc
Q 041878 462 VGALLAVLLILCCILLFCLMRKR 484 (773)
Q Consensus 462 ~~~~~~~l~~~~~~~~~~~~rrr 484 (773)
+|+++-++...+-.++.|.+|+|
T Consensus 2 iGa~LKVLa~~LP~liSWiK~kr 24 (26)
T 3qrx_B 2 IGAVLKVLTTGLPALISWIKRKR 24 (26)
T ss_pred chHHHHHHHccchHHHHHHHHHh
Confidence 34444444443333444555554
No 463
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.51 E-value=5.3e+02 Score=28.48 Aligned_cols=70 Identities=19% Similarity=0.234 Sum_probs=43.0
Q ss_pred EEeecCCCCHHHHH----------hhcCCCCc----cCHHHHHHHHHHHHH--HHHHhccCCCceecCCCCCCEEeCCCC
Q 041878 610 VFDFMPKGSLASFL----------HARGPETI----VNWATRMSIAIGIAR--GLNYLHVEENMIHGNLTSSNVLLDEKT 673 (773)
Q Consensus 610 V~e~~~~g~L~~~l----------~~~~~~~~----~~~~~~~~i~~~i~~--al~yLH~~~~iiH~Dik~~NIll~~~~ 673 (773)
+.|++++.++.+.+ .+..+... ..+..+..++...|- -+.|+= | -+|=.++|||++.+|
T Consensus 416 lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL---G--igDRH~~NILld~tG 490 (614)
T 3ls8_A 416 FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL---G--VGDRHLDNLLLTKTG 490 (614)
T ss_dssp EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH---T--CCCCCTTSEEECTTS
T ss_pred eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee---e--ccCCCCcceeEcCCC
Confidence 45888765555544 33322111 124455555555442 344443 2 258889999999999
Q ss_pred CeEEeecCCcc
Q 041878 674 NPRIADFGLSR 684 (773)
Q Consensus 674 ~~kl~DfG~a~ 684 (773)
++.=+|||.+-
T Consensus 491 ~v~HIDFG~~f 501 (614)
T 3ls8_A 491 KLFHIDFGYIL 501 (614)
T ss_dssp CEEECCCSSCT
T ss_pred CEeeeehHHhh
Confidence 99999999874
Done!