BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041882
(491 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/461 (60%), Positives = 352/461 (76%), Gaps = 14/461 (3%)
Query: 5 HTLSTKTHFHSQKPKPKPSTKPRRKQNPQNHKTIRKTKEPIPFVNDLKEIRDPDEALSLF 64
++++ H+H+ +P+ KP TK P HK RK E +PF+ DLKEI DP+EALSLF
Sbjct: 13 QCIASQRHYHTSRPE-KP-TKKASSHEP-THKFTRKPWEEVPFLTDLKEIEDPEEALSLF 69
Query: 65 HRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKA 124
H++ +MG +H YPSY+SLIYKLA++R+FDAV+ +L ++ N+RC+E+LF+ LIQHYGKA
Sbjct: 70 HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKA 129
Query: 125 HLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISF 184
VDKAI+VF+++TSFDCVRT+QS N+L+++LVDN ++ AK FD A M RPN +SF
Sbjct: 130 GSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 189
Query: 185 NVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIK 244
N++IKG L K +WE A +VFDEMLE EV P+VVTYNSLIGFLCR +MGKAK L EDMIK
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 245 KGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEE 304
K PNAVT+ LLM+GLC KGEYNEAKK+MFDM YRGCKP LVN+G+LMSDLGKRG+I+E
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 305 AKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVD 364
AK LL EMKKR+ KPDVV YNIL+N+LC E R EAY+VLTEMQ+ GCKPNAATYRMM+D
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 365 GFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRF 424
GF R+EDF+ L VLNAML SRHCP TF C++ GL+KGG +D ACFVLE M K+ + F
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Query: 425 DLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSVMNV 465
AW+ L++D CI DG Y A+S V+++
Sbjct: 430 GSGAWQNLLSDLCIKDGGV-----------YCEALSEVISI 459
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 228/462 (49%), Gaps = 77/462 (16%)
Query: 44 PIPFVNDLKEIRDPDEALSLF---HRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLG 100
P V+ + + ++ D AL +F + H G H+Y +Y S+++KL+RAR FD VE+++
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAGKSHP-GFTHNYDTYHSILFKLSRARAFDPVESLMA 107
Query: 101 YIQDF--NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVD 158
+++ I+C E LFI L+++YG A + ++ +F R+ F R+++S N+LL++L+
Sbjct: 108 DLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQ 167
Query: 159 NDRVDDAKRMFDDA-DKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVV 217
N R D MF ++ + G PN+ + N+++K KK + E A +V DE+ + P +V
Sbjct: 168 NQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLV 227
Query: 218 TYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDM 277
TY +++G G+M AK + E+M+ +G YP+A TY +LM+G C G ++EA +M DM
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 278 AYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDV---------------- 321
+P V +GV++ L K K EA+++ EM +R + PD
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKV 347
Query: 322 -------------------VTYNILINYLCKEDRAAEAYKVLTEMQIGG----------- 351
+ LI++LCKE R EA K+ E + G
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLI 407
Query: 352 -----------------------CKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC 388
CKPNA TY ++++G + + + ++VL ML
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 389 PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWE 430
P TF L GL K GK +DA ++ M + D ++WE
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIV-SMAVMNGKVDKESWE 508
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 292 LMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIG- 350
L+ + G G+ E + + + K V + N L+N L + R + + +
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 351 GCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
G PN T ++V + D E + KVL+ + + P L T++ +L G + G ++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 411 CFVLEEMEKRKMRFDLKAWEGLVTDAC 437
VLEEM R D + L+ C
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYC 272
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 207/410 (50%), Gaps = 44/410 (10%)
Query: 54 IRDPDEAL---SLFHRHHQMGS-KHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRC 109
+ +P EA +F +MGS K + +S+I A + DFD+VE +L I+ N
Sbjct: 51 VENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVI 110
Query: 110 KETLFISLIQHYGKAHLVDKAIEVFNRMT-SFDCVRTLQSFNSLLDILVDNDRVDDAKRM 168
E FI + + YGKAHL DKA+++F+RM F C R+++SFNS+L+++++
Sbjct: 111 IERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170
Query: 169 FD----DADKMGFRPNLISFNVMIK----------------------------------- 189
+D M PN +SFN++IK
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230
Query: 190 GRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYP 249
G K+ +EA + DEM P+ V YN LI LC+ G++ + L ++M KG P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 250 NAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLL 309
N VTY L+ GLC KG+ ++A ++ M C P V +G L++ L K+ + +A LL
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 310 SEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRV 369
S M++R Y + Y++LI+ L KE +A EA + +M GCKPN Y ++VDG R
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 370 EDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEK 419
+ ++LN M+ S P T+S L+ G K G ++A V +EM+K
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 202/395 (51%), Gaps = 8/395 (2%)
Query: 57 PDEALSLFHRH-HQMGSKHSYPSYASLIYKLARA----RDFDAVETVLGYIQDFNIRCKE 111
PD+A+ LFHR + K S S+ S++ + R + + V+ + NI
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
F +I+ K VD+AIEVF M C+ ++ +L+D L +R+D+A + D+
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 172 ADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE 231
G P+ + +NV+I G KKG+ +++ D M + P VTYN+LI LC G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 232 MGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGV 291
+ KA L E M+ PN VTY L+ GL + +A +++ M RG + V
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 292 LMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGG 351
L+S L K GK EEA SL +M ++ KP++V Y++L++ LC+E + EA ++L M G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 352 CKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLE-TFSCLLVGLLKGGKVDDA 410
C PNA TY ++ GF + E +++V M C R + +S L+ GL G+V +A
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 411 CFVLEEMEKRKMRFDLKAWEGLVTDAC-IGDGNAG 444
V +M ++ D A+ ++ C IG +A
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 185/404 (45%), Gaps = 24/404 (5%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
DEA+ L G S Y LI L + D V ++ + E + +L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I +DKA+ + RM S C+ ++ +L++ LV R DA R+ ++ G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
N ++V+I G K+G+ EEA ++ +M E+ P +V Y+ L+ LCR G+ +AK
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
+ MI G PNA TY+ LM+G G EA ++ +M GC + VL+ L
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM---QIGGCKP 354
G+++EA + S+M KPD V Y+ +I LC A K+ EM + +P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAML--------------------TSRHCPRLETF 394
+ TY +++DG +D ++ +LN+ML S C + +F
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 395 -SCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
L+V LLK +V AC ++E M + + W +V + C
Sbjct: 599 LEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 144/321 (44%), Gaps = 19/321 (5%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N L + R +A+ L + G + Y+ LI L + + ++ + +
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ ++ L+ + ++A E+ NRM + C+ +++SL+ ++A
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+++ + DK G N ++V+I G G +EA V+ +ML + P V Y+S+I L
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 227 CRTGEMGKAKGLFEDMI---KKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCK 283
C G M A L+ +M+ + + P+ VTY +L++GLC + + + A ++ M RGC
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Query: 284 PQLVNFGVLMSDLG-KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYK 342
P ++ ++ L K ++ +S L E+ R L K R + A
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR---------------LLKRQRVSGACT 617
Query: 343 VLTEMQIGGCKPNAATYRMMV 363
++ M P +T+ M+V
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIV 638
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 209/395 (52%), Gaps = 5/395 (1%)
Query: 48 VNDLKEIRDPDEALSLFHR-HHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
V+ +K RDP L +F++ Q G H+ +Y+ L+ L R + F AV+ +L ++
Sbjct: 60 VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVR-TLQSFNSLLDILVDNDRVDDA 165
R +E+LF++L++H+ ++ L DK +E+FN + V+ +L + ++ L++L+D+ V+ +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS 179
Query: 166 KRMFDDA-DKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVP-PTVVTYNSLI 223
+++ A +G +PN FN+++K K G+ A V +EM + P +TY++L+
Sbjct: 180 RKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 224 GFLCRTGEMGKAKGLFEDMI-KKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGC 282
L +A LFEDMI K+G P+ VT+ +++ G C GE AKK++ M GC
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 283 KPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYK 342
P + N+ LM+ K GKI+EAK E+KK K D V Y L+N C+ EA K
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 343 VLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLL 402
+L EM+ C+ + TY +++ G E +L++L+ + ++ +L L
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 403 KGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
G+++ A L M +R + W LV C
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC 454
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 148/324 (45%), Gaps = 2/324 (0%)
Query: 63 LFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYG 122
L + H +G + + + L+ + D + V+ ++ I ++ S +
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 123 KAHLVDK-AIEVFNRMTSFDCVRT-LQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPN 180
AH K A+E+F M S + + +FN +++ V+ AK++ D K G PN
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 181 LISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFE 240
+ +++ ++ G K G+ +EA + FDE+ + + V Y +L+ CR GE +A L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 241 DMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRG 300
+M + +TY +++ GL +G EA +M+ G ++ ++++ L G
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 301 KIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYR 360
++E+A LS M +R P T+N L+ LC+ +VL G P ++
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWG 482
Query: 361 MMVDGFLRVEDFEGSLKVLNAMLT 384
+V+ + ++L+++++
Sbjct: 483 AVVESICKERKLVHVFELLDSLVS 506
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 188/360 (52%), Gaps = 4/360 (1%)
Query: 40 KTKEPIPFVNDLKEIRDPDEALSLFHR---HHQMGSKHSYPSYASLIYKLARARDFDAVE 96
K P + ++ +D ++++++F + G H S+ ++ +L A F A E
Sbjct: 12 KNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAE 71
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
++ ++ N E + +S+ + YG+ H ++ VF++M FDC + +++ ++L IL
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKK-GEWEEASRVFDEMLEREVPPT 215
V+ ++++ A + + + ++G P + S NV+IK + G + ++F EM +R P
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 216 VVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 275
TY +LI LCR G + +AK LF +M++K P VTY L+ GLC +EA + +
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 276 DMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKED 335
+M +G +P + + LM L K G+ +A L M R +P++VTY LI LCKE
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 311
Query: 336 RAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFS 395
+ EA ++L M + G KP+A Y ++ GF + F + L+ M+ P T++
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 10/295 (3%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D L +F + G +Y +LI L R D + + + + + + SL
Sbjct: 174 DAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + VD+A+ M S + +++SL+D L + R A +F+ G
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
RPN++++ +I G K+ + +EA + D M + + P Y +I C + +A
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 238 LFEDMIKKGTYPNAVTYAL-------LMEGLCFKGEY-NEAKKMMFDMAYRGCKPQLVNF 289
++MI G PN +T+ + ++ GLC Y + A + M RG ++
Sbjct: 354 FLDEMILGGITPNRLTWNIHVKTSNEVVRGLC--ANYPSRAFTLYLSMRSRGISVEVETL 411
Query: 290 GVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
L+ L K+G+ ++A L+ E+ P T+ +LI + + EA L
Sbjct: 412 ESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 196/401 (48%), Gaps = 7/401 (1%)
Query: 44 PIPFVNDLKEI-------RDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P V D + + + L+L + G HS + + +I R R
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+ +G I +F +L+ V +A+E+ +RM TL + N+L++ L
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
N +V DA + D + GF+PN +++ ++ K G+ A + +M ER +
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
V Y+ +I LC+ G + A LF +M KG + +TY L+ G C G +++ K++ D
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M R P +V F VL+ K GK+ EA LL EM +R P+ +TYN LI+ CKE+R
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSC 396
EA +++ M GC P+ T+ ++++G+ + + L++ M T++
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 397 LLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
L+ G + GK++ A + +EM R++R D+ +++ L+ C
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 201/400 (50%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EAL L R +MG K + + +L+ L ++ + + + E + ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K+ A+E+ +M + ++ ++D L + +D+A +F++ + GF+
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
++I++N +I G G W++ +++ +M++R++ P VVT++ LI + G++ +A L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
++M+++G PN +TY L++G C + EA +M+ M +GC P ++ F +L++ K
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
+I++ L EM R + VTYN L+ C+ + A K+ EM +P+ +
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y++++DG + E +L++ + S+ + + ++ G+ KVDDA + +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMA 458
+ ++ D +A+ ++++ C D + + R M + A
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 180/395 (45%), Gaps = 35/395 (8%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
+A+ L R + G + + +Y ++ + ++ +L +++ NI+ + +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K +D A +FN M + ++N+L+ + R DD ++ D K
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+++F+V+I +K+G+ EA ++ EM++R + P +TYNSLI C+ + +A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 239 FEDMIKKGTYP-----------------------------------NAVTYALLMEGLCF 263
+ MI KG P N VTY L++G C
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 264 KGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVT 323
G+ AKK+ +M R +P +V++ +L+ L G++E+A + +++K + + D+
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 324 YNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAML 383
Y I+I+ +C + +A+ + + + G K +A Y +M+ R + + + M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 384 TSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
H P T++ L+ L A ++EEM+
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 173/353 (49%), Gaps = 1/353 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D A +LF+ G K +Y +LI A +D +L + I F L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + K + +A ++ M ++NSL+D +R+++A +M D G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
P++++FN++I G K ++ +F EM R V VTYN+L+ C++G++ AK
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF++M+ + P+ V+Y +L++GLC GE +A ++ + + + + +++ +
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K+++A L + + K D YNI+I+ LC++D ++A + +M G P+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
TY +++ L +D + +++ M +S + T +++ +L G++D +
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK-MVINMLSSGELDKS 631
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 152/310 (49%)
Query: 128 DKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVM 187
D A+++F M + T+ FN L + + + + + G ++ + ++M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 188 IKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGT 247
I + + A ++++ P V +N+L+ LC + +A L + M++ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 248 YPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKS 307
P +T L+ GLC G+ ++A ++ M G +P V +G +++ + K G+ A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 308 LLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFL 367
LL +M++R K D V Y+I+I+ LCK+ A+ + EM+I G K + TY ++ GF
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 368 RVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLK 427
++ K+L M+ + P + TFS L+ +K GK+ +A +L+EM +R + +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 428 AWEGLVTDAC 437
+ L+ C
Sbjct: 370 TYNSLIDGFC 379
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 1/281 (0%)
Query: 161 RVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYN 220
+ DDA +F D + P +I FN + K ++E + +M + + ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
+I CR ++ A ++K G P+ V + L+ GLC + +EA +++ M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
G KP L+ L++ L GK+ +A L+ M + ++P+ VTY ++N +CK + A A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
++L +M+ K +A Y +++DG + + + + N M + T++ L+ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDG 441
G+ DD +L +M KRK+ ++ + L+ D+ + +G
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI-DSFVKEG 347
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 92/195 (47%)
Query: 268 NEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNIL 327
++A + DM P +++F L S + K + E +L +M+ + + T +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 328 INYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRH 387
IN C+ + + A+ + ++ G +P+ + +++G +L++++ M+ H
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 388 CPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLV 447
P L T + L+ GL GKV DA +++ M + + + + ++ C A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 448 EIRDMRDYSMAISSV 462
+R M + ++ + +V
Sbjct: 250 LLRKMEERNIKLDAV 264
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 31/396 (7%)
Query: 73 KHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIE 132
KH+ ++ +I KLA D+V+ +L ++ C E LFIS+I Y + L ++A+E
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 132
Query: 133 VFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRL 192
+F R+ F C +++ +N +LD L+ +R+ ++ D + GF PN+ ++NV++K
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 193 KKGEWEEASRVFDEM------------------------------LEREVPPTVVTYNSL 222
K + + A ++ EM L P V YN+L
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNAL 252
Query: 223 IGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGC 282
I LC+ + A L +M++KG PN ++Y+ L+ LC G+ A + M RGC
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 283 KPQLVNFGVLMSDLGKRGKIEEAKSLLSEM-KKRQYKPDVVTYNILINYLCKEDRAAEAY 341
P + L+ RG +A L ++M + +P+VV YN L+ C +A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 342 KVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGL 401
V + M+ GC PN TY +++GF + +G++ + N MLTS CP + ++ ++ L
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 402 LKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ K +A ++E M K + + + C
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 192/408 (47%), Gaps = 12/408 (2%)
Query: 79 YASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMT 138
Y +LI L + D+ ++ + + I + +LI + ++ A +M
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 139 SFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADK-MGFRPNLISFNVMIKGRLKKGEW 197
C + + +SL+ DA +++ + G +PN++++N +++G G
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
+A VF M E P + TY SLI + G + A ++ M+ G PN V Y +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKR-Q 316
+E LC ++ EA+ ++ M+ C P + F + L G+++ A+ + +M+++ +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 317 YKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSL 376
P++VTYN L++ L K +R EAY + E+ + G + +++TY ++ G +L
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 377 KVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME--KRKMRFDLKAWEGLVT 434
+++ M+ P T + +++ K GK + A +L+ + +RK R D+ ++ ++
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIW 608
Query: 435 DACIGDGNAGGLVEIRDMRDYSMAISSVMNVVDLLWTYLGMGTCVVID 482
C + G++ + M IS+ +V + T+ + C ++D
Sbjct: 609 GLCRSNCREDGVILLERM------ISA--GIVPSIATWSVLINCFILD 648
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 155/313 (49%), Gaps = 4/313 (1%)
Query: 59 EALSLFHRH-HQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
+AL L+++ G + + +Y +L+ + +V ++++ + SL
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + K +D A+ ++N+M + C + + ++++ L + + +A+ + + K
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLERE-VPPTVVTYNSLIGFLCRTGEMGKAK 236
P++ +FN IKG G + A +VF +M ++ PP +VTYN L+ L + + +A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
GL ++ +G ++ TY L+ G C G A +++ M G P + +++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 297 GKRGKIEEAKSLLSEMK--KRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
K+GK E A +L + +R+++PDV++Y +I LC+ + + +L M G P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 355 NAATYRMMVDGFL 367
+ AT+ ++++ F+
Sbjct: 634 SIATWSVLINCFI 646
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 201/431 (46%), Gaps = 41/431 (9%)
Query: 69 QMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVD 128
Q G +HS+ Y LI KL +F ++ +L ++D I KE+LFIS+++ Y KA
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 129 KAIEVFNRMTS-FDCVRTLQSFNSLLDILVDN---------------------------- 159
+ + M + + C T +S+N +L+ILV
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 160 -------DRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREV 212
+ +D A + D K G PN + + +I K EA ++ +EM
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 213 PPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKK 272
P T+N +I LC+ + +A + M+ +G P+ +TY LM GLC G + AK
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK- 342
Query: 273 MMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEM-KKRQYKPDVVTYNILINYL 331
D+ YR KP++V F L+ G++++AK++LS+M PDV TYN LI
Sbjct: 343 ---DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 332 CKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRL 391
KE A +VL +M+ GCKPN +Y ++VDGF ++ + + VLN M P
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 392 ETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRD 451
F+CL+ K ++ +A + EM ++ + D+ + L++ C D L +RD
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 452 MRDYSMAISSV 462
M + ++V
Sbjct: 520 MISEGVVANTV 530
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 185/388 (47%), Gaps = 5/388 (1%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLG-YIQDF 105
+N L +I D A LF+R K + +LI+ D + VL + +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I + SLI Y K LV A+EV + M + C + S+ L+D ++D+A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
+ ++ G +PN + FN +I K+ EA +F EM + P V T+NSLI
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
LC E+ A L DMI +G N VTY L+ +GE EA+K++ +M ++G
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+ + L+ L + G++++A+SL +M + + P ++ NILIN LC+ EA +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
EM + G P+ T+ +++G R E L + + P TF+ L+ L KGG
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 406 KVDDACFVLEEMEKRKMRFDLKAWEGLV 433
V DAC +L+E + + + W L+
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 160/314 (50%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
AL + H G K + SY L+ + D VL + ++ F LI
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
+ K H + +A+E+F M C + +FNSL+ L + D + A + D G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
N +++N +I L++GE +EA ++ +EM+ + P +TYNSLI LCR GE+ KA+ LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKR 299
E M++ G P+ ++ +L+ GLC G EA + +M RG P +V F L++ L +
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 300 GKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATY 359
G+IE+ ++ +++ PD VT+N L+++LCK +A +L E G PN T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 360 RMMVDGFLRVEDFE 373
+++ + E +
Sbjct: 708 SILLQSIIPQETLD 721
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 196/418 (46%), Gaps = 18/418 (4%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
+EA + +R G +Y L+ L + DA + + I I +F +L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTL 359
Query: 118 IQHYGKAHLVDKAIEVFNRM-TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
I + +D A V + M TS+ V + ++NSL+ V A + D G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
+PN+ S+ +++ G K G+ +EA V +EM + P V +N LI C+ + +A
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
+F +M +KG P+ T+ L+ GLC E A ++ DM G V + L++
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
+RG+I+EA+ L++EM + D +TYN LI LC+ +A + +M G P+
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 357 ATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEE 416
+ ++++G R E +++ M+ P + TF+ L+ GL + G+++D + +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 417 MEKRKMRFD------LKAW---EGLVTDAC--IGDGNAGGLVEIRDMRDYSMAISSVM 463
++ + D L +W G V DAC + +G G V + R +S+ + S++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP--NHRTWSILLQSII 715
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 1/381 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D +SL + +G H+ +Y+ I R +LG + SL
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ + + + +A+ + ++M +F +L+ L +++ +A + + G
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+P+L+++ +I G K+GE + A + ++M + ++ VV YN++I LC+ M A
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF M KG P+ TY L+ LC G +++A +++ DM + P LV F L+
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 298 KRGKIEEAKSLLSEMKKRQYK-PDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
K GK+ EA+ L EM K ++ PDVV YN LI CK R E +V EM G N
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 357 ATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEE 416
TY ++ GF + D + + V M++ P + T++ LL GL G V+ A V E
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 417 MEKRKMRFDLKAWEGLVTDAC 437
M+KR M+ D+ + ++ C
Sbjct: 452 MQKRDMKLDIVTYTTMIEALC 472
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 185/390 (47%), Gaps = 2/390 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
V+ L + EA++L R G + +Y ++I L + + D +L ++
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I ++ ++I K +D A ++FN+M + + ++N L+ L + R DA
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLE-REVPPTVVTYNSLIGF 225
R+ D + P+L+ FN +I +K+G+ EA +++DEM++ + P VV YN+LI
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
C+ + + +F +M ++G N VTY L+ G + + A+ + M G P
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
++ + +L+ L G +E A + M+KR K D+VTY +I LCK + + + +
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
+ + G KPN TY M+ GF R E + + M P T++ L+ L+ G
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 406 KVDDACFVLEEMEKRKMRFDLKAWEGLVTD 435
+ +++EM D + GLVT+
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTF-GLVTN 574
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 169/330 (51%), Gaps = 5/330 (1%)
Query: 109 CKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRM 168
C+E L ++Q +D AI +F M ++ F+ LL + ++ D +
Sbjct: 42 CRENLSRKVLQDLK----LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISL 97
Query: 169 FDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCR 228
+ +G NL ++++ I ++ + A + +M++ P++VT NSL+ C
Sbjct: 98 GEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCH 157
Query: 229 TGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVN 288
+ +A L + M++ G P+ VT+ L+ GL + +EA ++ M +GC+P LV
Sbjct: 158 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 289 FGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQ 348
+G +++ L KRG+ + A +LL++M+K + + DVV YN +I+ LCK +A+ + +M+
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 349 IGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVD 408
G KP+ TY ++ + + ++L+ ML P L F+ L+ +K GK+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 409 DACFVLEEMEKRKMRF-DLKAWEGLVTDAC 437
+A + +EM K K F D+ A+ L+ C
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 193/405 (47%), Gaps = 9/405 (2%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIR-CKETL--FI 115
EA++L + +MG + ++ +L++ L + + + ++ ++ C+ L +
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
++I K D A+ + N+M + +N+++D L +DDA +F+ +
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G +P++ ++N +I G W +ASR+ +MLE+ + P +V +N+LI + G++ +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 236 KGLFEDMIK-KGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
+ L+++M+K K +P+ V Y L++G C E ++ +M+ RG V + L+
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
+ + A+ + +M PD++TYNIL++ LC A V MQ K
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
+ TY M++ + E + ++ P + T++ ++ G + G ++A +
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 415 EEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVE-IRDMRDYSMA 458
EM++ + + L+ A + DG+ E I++MR A
Sbjct: 520 VEMKEDGPLPNSGTYNTLIR-ARLRDGDEAASAELIKEMRSCGFA 563
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 183/337 (54%), Gaps = 6/337 (1%)
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
+LI+ + + KA ++ + V + ++N ++ +++A + D +M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RM 198
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
P+++++N +++ G+ ++A V D ML+R+ P V+TY LI CR +G A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
L ++M +G P+ VTY +L+ G+C +G +EA K + DM GC+P ++ +++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
+ G+ +A+ LL++M ++ + P VVT+NILIN+LC++ A +L +M GC+PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC-PRLETFSCLLVGLLKGGKVDDACFVL 414
+ +Y ++ GF + + + +++ L M+ SR C P + T++ +L L K GKV+DA +L
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 415 EEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRD 451
++ + L + V D G G +++ D
Sbjct: 438 NQLSSKGCSPVLITYN-TVIDGLAKAGKTGKAIKLLD 473
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 162/309 (52%)
Query: 129 KAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMI 188
+A+EV +RM DC + ++ L++ + V A ++ D+ G P+++++NV++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 189 KGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTY 248
G K+G +EA + ++M P V+T+N ++ +C TG A+ L DM++KG
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 249 PNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSL 308
P+ VT+ +L+ LC KG A ++ M GC+P +++ L+ K K++ A
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 309 LSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLR 368
L M R PD+VTYN ++ LCK+ + +A ++L ++ GC P TY ++DG +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 369 VEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKA 428
++K+L+ M P T+S L+ GL + GKVD+A E E+ +R +
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 429 WEGLVTDAC 437
+ ++ C
Sbjct: 522 FNSIMLGLC 530
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 171/320 (53%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ LI+ + V A+++ + M C + ++N L++ + R+D+A + +D
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
G +PN+I+ N++++ G W +A ++ +ML + P+VVT+N LI FLCR G +G
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A + E M + G PN+++Y L+ G C + + + A + + M RGC P +V + ++
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
+ L K GK+E+A +L+++ + P ++TYN +I+ L K + +A K+L EM+ K
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
P+ TY +V G R + ++K + P TF+ +++GL K + D A
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 414 LEEMEKRKMRFDLKAWEGLV 433
L M R + + ++ L+
Sbjct: 542 LVFMINRGCKPNETSYTILI 561
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 174/319 (54%), Gaps = 7/319 (2%)
Query: 117 LIQHYGKAHLVDKAIEVFNRMT-SFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
+I Y KA ++ A+ V +RM+ S D V ++N++L L D+ ++ A + D +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
P++I++ ++I+ + A ++ DEM +R P VVTYN L+ +C+ G + +A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
DM G PN +T+ +++ +C G + +A+K++ DM +G P +V F +L++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
L ++G + A +L +M + +P+ ++YN L++ CKE + A + L M GC P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC-PRLETFSCLLVGLLKGGKVDDACFVL 414
TY M+ + E ++++LN L+S+ C P L T++ ++ GL K GK A +L
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILN-QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 415 EEMEKRKMRFDLKAWEGLV 433
+EM + ++ D + LV
Sbjct: 473 DEMRAKDLKPDTITYSSLV 491
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 176/362 (48%), Gaps = 6/362 (1%)
Query: 59 EALSLFHRHHQMGSKHSYP---SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFI 115
+A+ + R Q + YP +Y LI R +L ++D +
Sbjct: 222 QAMEVLDRMLQ---RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
L+ K +D+AI+ N M S C + + N +L + R DA+++ D +
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
GF P++++FN++I +KG A + ++M + P ++YN L+ C+ +M +A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
E M+ +G YP+ VTY ++ LC G+ +A +++ ++ +GC P L+ + ++
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
L K GK +A LL EM+ + KPD +TY+ L+ L +E + EA K E + G +PN
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
A T+ ++ G + + ++ L M+ P +++ L+ GL G +A +L
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 416 EM 417
E+
Sbjct: 579 EL 580
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 182/383 (47%), Gaps = 21/383 (5%)
Query: 64 FHRHHQMGSK-----HSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
FHR ++ G+K + S +S I +R R+ + + ++ + + F +L
Sbjct: 20 FHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLS 79
Query: 119 QHY----GKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADK 174
Y G H ++ + S + ++S N L +V +++ + ++
Sbjct: 80 SGYSNSNGNGH--------YSSVNSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVY 130
Query: 175 MGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGK 234
G P++I +I+G + G+ +A+++ + + P V+TYN +I C+ GE+
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 235 AKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
A + + M P+ VTY ++ LC G+ +A +++ M R C P ++ + +L+
Sbjct: 191 ALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
+ + A LL EM+ R PDVVTYN+L+N +CKE R EA K L +M GC+P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
N T+ +++ + + K+L ML P + TF+ L+ L + G + A +L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 415 EEMEKRKMRFDLKAWEGLVTDAC 437
E+M + + + ++ L+ C
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFC 390
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 112/222 (50%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
A+ + + Q G + + SY L++ + + D L + + +++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
K V+ A+E+ N+++S C L ++N+++D L + A ++ D+ +P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
+ I+++ ++ G ++G+ +EA + F E + P VT+NS++ LC++ + +A
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRG 281
MI +G PN +Y +L+EGL ++G EA +++ ++ +G
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
DEA+ FH +MG + + ++ S++ L ++R D L ++ + + ET + L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 118 IQHYGKAHLVDKAIEVFNRM 137
I+ + +A+E+ N +
Sbjct: 561 IEGLAYEGMAKEALELLNEL 580
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 199/418 (47%), Gaps = 8/418 (1%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D++L LF Q S ++ L+ +++ + +D V + +Q I L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ + + + A+ +M ++ +F SLL+ DRV DA MFD MG+
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+PN++ +N +I G K + + A + + M + + P VVTYNSLI LC +G A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
+ M K+ YP+ T+ L++ +G +EA++ +M R P +V + +L+ L
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
+++EA+ + M + PDVVTY+ILIN CK + K+ EM G N
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
TY +++ G+ R + ++ M+ P + T++ LL GL GK++ A +L +M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 418 EKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSVMNVVDLLWTYLGM 475
+K M D+ + ++ C AG E+ D D +++ + D +WTY M
Sbjct: 423 QKNGMDADIVTYNIIIRGMC----KAG---EVADAWDIYCSLNCQGLMPD-IWTYTTM 472
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 185/374 (49%), Gaps = 7/374 (1%)
Query: 44 PIPFVND-------LKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P + D + +++ D + L+ + +G H+ + L+ R
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+ LG + F SL+ + + V A+ +F++M + +N+++D L
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
+ +VD+A + + +K G P+++++N +I G G W +A+R+ M +RE+ P V
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
T+N+LI + G + +A+ +E+MI++ P+ VTY+LL+ GLC +EA++M
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M +GC P +V + +L++ K K+E L EM +R + VTY ILI C+ +
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSC 396
A ++ M G PN TY +++ G E +L +L M + + T++
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 397 LLVGLLKGGKVDDA 410
++ G+ K G+V DA
Sbjct: 437 IIRGMCKAGEVADA 450
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 148/311 (47%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D ++++F M + ++ F+ LL + + D +++ +G NL + N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
++ + + A +M++ P++VT+ SL+ CR + A +F+ M+ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
PN V Y +++GLC + + A ++ M G P +V + L+S L G+ +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
++S M KR+ PDV T+N LI+ KE R +EA + EM P+ TY +++ G
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++ M++ P + T+S L+ G K KV+ + EM +R + +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 427 KAWEGLVTDAC 437
+ L+ C
Sbjct: 362 VTYTILIQGYC 372
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L + + D AL L +R + G +Y SLI L + + ++ +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I F +LI K V +A E + M + +++ L+ L R+D+A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
MF G P++++++++I G K + E ++F EM +R V VTY LI
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
CR G++ A+ +F M+ G +PN +TY +L+ GLC G+ +A ++ DM G +
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
V + +++ + K G++ +A + + + PD+ TY ++ L K+ EA + +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 347 MQIGGCKPN 355
M+ G PN
Sbjct: 492 MKEDGILPN 500
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 120/252 (47%)
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
M++ ++ + +++ +F M++ P++ ++ L+ + + + L+E M G
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
N T +L+ C + + A + M G +P +V FG L++ + ++ +A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+ +M YKP+VV YN +I+ LCK + A +L M+ G P+ TY ++ G
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++++ M P + TF+ L+ +K G+V +A EEM +R + D+
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 427 KAWEGLVTDACI 438
+ L+ C+
Sbjct: 292 VTYSLLIYGLCM 303
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 247 TYPNAVTY-ALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEA 305
Y N Y +L G+ F + +++ + F M P + +F L+S + K K +
Sbjct: 42 AYSNGSDYREMLRNGIRFM-KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV 100
Query: 306 KSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDG 365
L +M+ ++ T NIL+N C+ + + A L +M G +P+ T+ +++G
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 366 FLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFD 425
F R + +L + + M+ + P + ++ ++ GL K +VD+A +L MEK + D
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 426 LKAWEGLVTDAC 437
+ + L++ C
Sbjct: 221 VVTYNSLISGLC 232
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 2/385 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARA-RDFDAVETVLGYIQDFNIRCKETLFIS 116
D+ALS+ H G SY +++ R+ R+ E V + + + +
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
LI+ + A +D A+ +F++M + C+ + ++N+L+D ++DD ++ G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
PNLIS+NV+I G ++G +E S V EM R VTYN+LI C+ G +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
+ +M++ G P+ +TY L+ +C G N A + + M RG P + L+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
++G + EA +L EM + P VVTYN LIN C + +A VL +M+ G P+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 357 ATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEE 416
+Y ++ GF R D + +L+V M+ P T+S L+ G + + +AC + EE
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 417 MEKRKMRFDLKAWEGLVTDACI-GD 440
M + + D + L+ C+ GD
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGD 535
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 205/424 (48%), Gaps = 25/424 (5%)
Query: 58 DEALSLFHRH----HQMGSKHSYPSYASLIYKLARARDFDAVETVLGYI---QDFNIRCK 110
D+AL+ RH H + + + + ++L+ K D + L + Q F +RCK
Sbjct: 26 DKALTFLKRHPYQLHHLSANFTPEAASNLLLK--SQNDQALILKFLNWANPHQFFTLRCK 83
Query: 111 -ETLFI-SLIQHYGKAHLV--DKAIEVFNRMTSFDCVRTLQ-------SFNSLLDILVDN 159
TL I + + Y A ++ D A + + + ++LQ S +S+ D++V +
Sbjct: 84 CITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKS 143
Query: 160 ----DRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLK-KGEWEEASRVFDEMLEREVPP 214
+D A + A GF P ++S+N ++ ++ K A VF EMLE +V P
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 215 TVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMM 274
V TYN LI C G + A LF+ M KG PN VTY L++G C + ++ K++
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 275 FDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKE 334
MA +G +P L+++ V+++ L + G+++E +L+EM +R Y D VTYN LI CKE
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 335 DRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETF 394
+A + EM G P+ TY ++ + + +++ L+ M CP T+
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 395 SCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRD 454
+ L+ G + G +++A VL EM + + L+ C+ + + DM++
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 455 YSMA 458
++
Sbjct: 444 KGLS 447
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 177/400 (44%), Gaps = 15/400 (3%)
Query: 53 EIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKET 112
++R D+ L G + + SY +I L R V VL + E
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 113 LFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDA 172
+ +LI+ Y K +A+ + M ++ ++ SL+ + ++ A D
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 173 DKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEM 232
G PN ++ ++ G +KG EA RV EM + P+VVTYN+LI C TG+M
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 233 GKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVL 292
A + EDM +KG P+ V+Y+ ++ G C + +EA ++ +M +G KP + + L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 293 MSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGC 352
+ ++ + +EA L EM + PD TY LIN C E +A ++ EM G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 353 KPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLL-----------VGL 401
P+ TY ++++G + + ++L + P T+ L+ V L
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 402 LKG----GKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+KG G + +A V E M + + D A+ ++ C
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 166/322 (51%), Gaps = 17/322 (5%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ SLI KA +++A+E ++M +++ +L+D +++A R+ + +
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
GF P+++++N +I G G+ E+A V ++M E+ + P VV+Y++++ CR+ ++
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A + +M++KG P+ +TY+ L++G C + EA + +M G P + L+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
+ G +E+A L +EM ++ PDVVTY++LIN L K+ R EA ++L ++
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 354 PNAATYRMMVDGFLRVEDFEGSL----------------KVLNAMLTSRHCPRLETFSCL 397
P+ TY +++ +E F+ + +V +ML H P ++ +
Sbjct: 588 PSDVTYHTLIENCSNIE-FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 398 LVGLLKGGKVDDACFVLEEMEK 419
+ G + G + A + +EM K
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVK 668
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 137/317 (43%), Gaps = 17/317 (5%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
++A+++ + G SY++++ R+ D D V + + I+ + SL
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
IQ + + +A +++ M ++ +L++ ++ A ++ ++ + G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLI-------------- 223
P++++++V+I G K+ EA R+ ++ E P+ VTY++LI
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 224 --GFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRG 281
GF C G M +A +FE M+ K P+ Y +++ G C G+ +A + +M G
Sbjct: 612 IKGF-CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 282 CKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAY 341
V L+ L K GK+ E S++ + + + +L+ +E
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 342 KVLTEMQIGGCKPNAAT 358
VL EM G PN +
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 56 DPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFI 115
D DEAL + + G K +Y+SLI R + + + E +
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
+LI Y ++KA+++ N M + + +++ L++ L R +AKR+
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 176 GFRPNLISFNVMI---------------KGRLKKGEWEEASRVFDEMLEREVPPTVVTYN 220
P+ ++++ +I KG KG EA +VF+ ML + P YN
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
+I CR G++ KA L+++M+K G + VT L++ L +G+ NE ++ + R
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV-LR 703
Query: 281 GCKPQLVNFGVLMSDLGKR-GKIEEAKSLLSEMKKRQYKPDVVT 323
C+ ++ ++ R G ++ +L+EM K + P+ ++
Sbjct: 704 SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 216/442 (48%), Gaps = 43/442 (9%)
Query: 55 RDPDEALSLFHR-HHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYI-QDFNIRCKET 112
+DP +AL +F+ ++G KH+ +Y S+I KL F+A+E VL + ++ E
Sbjct: 18 KDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEG 77
Query: 113 LFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDA 172
+++ +++YG+ V +A+ VF RM +DC T+ S+N+++ +LVD+ D A +++
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 173 DKMGFRPNLISFNVMIKGRLKK------------------------------GEWEE--- 199
G P++ SF + +K K G +EE
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 200 --ASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
+F +ML V + T+N L+ LC+ G++ + + L + +IK+G PN TY L
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
++GLC +GE + A +M+ + +G KP ++ + L+ L K K +EA+ L +M
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLK 377
+PD TYN LI CK A +++ + G P+ TYR ++DG + +L
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 378 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAW----EGLV 433
+ N L P + ++ L+ GL G + +A + EM ++ + +++ + GL
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 434 TDACIGDGNAGGLVEIRDMRDY 455
C+ D A GLV++ + Y
Sbjct: 438 KMGCVSD--ADGLVKVMISKGY 457
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 180/403 (44%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
E LF + G ++ L+ L + D E +L + + + I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
Q + +D A+ + + + ++N+L+ L N + +A+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
P+ ++N +I G K G + A R+ + + P TY SLI LC GE +A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
F + + KG PN + Y L++GL +G EA ++ +M+ +G P++ F +L++ L K
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
G + +A L+ M + Y PD+ T+NILI+ + + A ++L M G P+ T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +++G + FE ++ M+ P L TF+ LL L + K+D+A +LEEM+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISS 461
+ + D + L+ C G R M + SS
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 35/359 (9%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ +++ + + + + E+F +M + L +FN LL +L V + +++ D
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K G PNL ++N+ I+G ++GE + A R+ ++E+ P V+TYN+LI LC+ +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 234 KAKGLFEDMIKKG------TY-----------------------------PNAVTYALLM 258
+A+ M+ +G TY P+ TY L+
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 259 EGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYK 318
+GLC +GE N A + + +G KP ++ + L+ L +G I EA L +EM ++
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 319 PDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKV 378
P+V T+NIL+N LCK ++A ++ M G P+ T+ +++ G+ E +L++
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 379 LNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
L+ ML + P + T++ LL GL K K +D + M ++ +L + L+ C
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 17/378 (4%)
Query: 78 SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRM 137
+Y SLI L + + + I+ L+ +LI+ ++ +A ++ N M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 138 TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEW 197
+ + +Q+FN L++ L V DA + G+ P++ +FN++I G + +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
E A + D ML+ V P V TYNSL+ LC+T + ++ M++KG PN T+ +L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKR-Q 316
+E LC + +EA ++ +M + P V FG L+ K G ++ A +L +M++ +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 317 YKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSL 376
TYNI+I+ ++ A K+ EM P+ TYR+MVDGF + +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 377 KVLNAMLTSRHCPRLETF----SCLLVG------------LLKGGKVDDACFVLEEMEKR 420
K L M+ + P L T +CL V +++ G V +A + +++K+
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKK 717
Query: 421 KMRFDLKAWEGLVTDACI 438
++ E L+ +CI
Sbjct: 718 EVAAPKLVLEDLLKKSCI 735
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 185/380 (48%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D +SL + +G H++ +Y+ LI R VLG + SL
Sbjct: 98 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 157
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ Y + + +A+ + ++M +FN+L+ L +++ +A + D G
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+P+L+++ V++ G K+G+ + A + ++M + ++ P V+ YN++I LC+ M A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF++M KG PN VTY+ L+ LC G +++A +++ DM R P + F L+
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K GK+ EA+ L EM KR P +VTY+ LIN C DR EA ++ M C P+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
TY ++ GF + + E ++V M T++ L+ GL + G D A + +EM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 418 EKRKMRFDLKAWEGLVTDAC 437
+ ++ + L+ C
Sbjct: 458 VSDGVPPNIMTYNTLLDGLC 477
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 165/310 (53%)
Query: 128 DKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVM 187
D A + N+M + +N+++D L +DDA +F + + G RPN+++++ +
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 188 IKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGT 247
I G W +ASR+ +M+ER++ P V T+++LI + G++ +A+ L+++M+K+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 248 YPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKS 307
P+ VTY+ L+ G C +EAK+M M + C P +V + L+ K ++EE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 308 LLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFL 367
+ EM +R + VTYNILI L + A ++ EM G PN TY ++DG
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 368 RVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLK 427
+ E ++ V + S+ P + T++ ++ G+ K GKV+D + + + ++ D+
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 428 AWEGLVTDAC 437
A+ +++ C
Sbjct: 538 AYNTMISGFC 547
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 196/401 (48%), Gaps = 2/401 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R G + +Y ++ L + D D +L ++ + ++ ++I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K +D A+ +F M + + +++SL+ L + R DA R+ D +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
P++ +F+ +I +K+G+ EA +++DEM++R + P++VTY+SLI C + +AK +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE M+ K +P+ VTY L++G C E ++ +M+ RG V + +L+ L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
G + A+ + EM P+++TYN L++ LCK + +A V +Q +P T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +M++G + E + + P + ++ ++ G + G ++A + +EM+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVE-IRDMRDYSMA 458
+ + + L+ A + DG+ E I++MR A
Sbjct: 564 EDGTLPNSGCYNTLIR-ARLRDGDREASAELIKEMRSCGFA 603
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 183/363 (50%), Gaps = 1/363 (0%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
++ L + + D+AL+LF G + + +Y+SLI L + +L + + I
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
F +LI + K + +A ++++ M ++ +++SL++ +DR+D+AK+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
MF+ P+++++N +IKG K EE VF EM +R + VTYN LI L
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ G+ A+ +F++M+ G PN +TY L++GLC G+ +A + + +P +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ +++ + K GK+E+ L + + KPDVV YN +I+ C++ EA + EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 348 QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKV 407
+ G PN+ Y ++ LR D E S +++ M + T L+ +L G++
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 621
Query: 408 DDA 410
D +
Sbjct: 622 DKS 624
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 161/314 (51%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D A+ +F M ++ F+ LL + ++ D + + +G N ++++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+I ++ + A V +M++ P +VT +SL+ C + + +A L + M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
PN VT+ L+ GL + +EA ++ M +GC+P LV +GV+++ L KRG + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+LL++M++ + +P V+ YN +I+ LCK +A + EM+ G +PN TY ++
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++L+ M+ + P + TFS L+ +K GK+ +A + +EM KR + +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 427 KAWEGLVTDACIGD 440
+ L+ C+ D
Sbjct: 362 VTYSSLINGFCMHD 375
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 10/321 (3%)
Query: 134 FNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLK 193
F+ TS+D R S N L ++ ++DDA +F + K P++I F+ ++ K
Sbjct: 40 FSGKTSYD-YREKLSRNGLSEL-----KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAK 93
Query: 194 KGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVT 253
+++ + ++M +P TY+ LI CR ++ A + M+K G PN VT
Sbjct: 94 MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153
Query: 254 YALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMK 313
+ L+ G C +EA ++ M G +P V F L+ L K EA +L+ M
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 314 KRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFE 373
+ +PD+VTY +++N LCK A+ +L +M+ G +P Y ++DG + + +
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 374 GSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLV 433
+L + M T P + T+S L+ L G+ DA +L +M +RK+ D+ + L+
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 434 TDACIGDGNAGGLVEIRDMRD 454
DA + +G LVE + D
Sbjct: 334 -DAFVKEGK---LVEAEKLYD 350
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 79/413 (19%)
Query: 49 NDLKEIRDPDEALSLFHRHHQMGSKHSYPS---YASLIYKLARARDFDAVETVLGYIQDF 105
N L E++ D+A++LF +M +PS ++ L+ +A+ FD V ++ +Q+
Sbjct: 55 NGLSELK-LDDAVALFG---EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I + LI + + + A+ V +M
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMM--------------------------- 143
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
K+G+ PN+++ + ++ G EA + D+M P VT+N+LI
Sbjct: 144 --------KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGE------------------- 266
L + +A L + M+ KG P+ VTY +++ GLC +G+
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 267 ---YN-------------EAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLS 310
YN +A + +M +G +P +V + L+S L G+ +A LLS
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 311 EMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVE 370
+M +R+ PDV T++ LI+ KE + EA K+ EM P+ TY +++GF +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC-MH 374
Query: 371 DFEGSLKVLNAMLTSRHC-PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKM 422
D K + + S+HC P + T++ L+ G K +V++ V EM +R +
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 185/415 (44%), Gaps = 35/415 (8%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D +SL + +G H+ +Y+ LI R VL + SL
Sbjct: 98 DLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL 157
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ + + + A+ + +M +FN+L+ L ++R +A + D G
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+P+L+++ +++ G K+G+ + A + +M + ++ P VV YN++I LC + A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF +M KG PN VTY L+ LC G +++A +++ DM R P +V F L+
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K GK+ EA+ L EM KR PD+ TY+ LIN C DR EA + M C PN
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAM-------------------LTSRHC---------- 388
TY ++ GF + + + +++ M +R C
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 389 ------PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
P + T+S LL GL GKV+ A V E +++ KM D+ + ++ C
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 6/382 (1%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLAR-ARDFDAVETVLGYIQDFNIRCKETLFISL 117
+A+SL + +MG + ++ +LI+ L R R +AV V + C+ L
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK---GCQPDLVTYG 225
Query: 118 IQHYG--KAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
I G K +D A+ + +M + +N+++D L + V+DA +F + D
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G RPN++++N +I+ G W +ASR+ +M+ER++ P VVT+++LI + G++ +A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+ L+++MIK+ P+ TY+ L+ G C +EAK M M + C P +V + L+
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
K +++E L EM +R + VTY LI+ + A V +M G P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
TY +++DG E +L V + S+ P + T++ ++ G+ K GKV+D +
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 416 EMEKRKMRFDLKAWEGLVTDAC 437
+ + ++ ++ + +++ C
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFC 547
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 194/396 (48%), Gaps = 2/396 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R G + +Y ++ L + D D ++L ++ I ++ ++I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
V+ A+ +F M + + ++NSL+ L + R DA R+ D +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+++F+ +I +K+G+ EA +++DEM++R + P + TY+SLI C + +AK +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE MI K +PN VTY L++G C +E ++ +M+ RG V + L+ +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
+ + A+ + +M PD++TY+IL++ LC + A V +Q +P+ T
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +M++G + E + ++ P + T++ ++ G + G ++A + EM+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVE-IRDMR 453
+ D + L+ A + DG+ E IR+MR
Sbjct: 564 EEGPLPDSGTYNTLIR-AHLRDGDKAASAELIREMR 598
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 160/314 (50%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D A+ +F M ++ F+ LL + ++ D + + +G NL ++++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+I ++ + A V +M++ P +VT NSL+ C + A L M++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
P++ T+ L+ GL +EA ++ M +GC+P LV +G++++ L KRG I+ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
SLL +M++ + +P VV YN +I+ LC +A + TEM G +PN TY ++
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++L+ M+ + P + TFS L+ +K GK+ +A + +EM KR + D+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 427 KAWEGLVTDACIGD 440
+ L+ C+ D
Sbjct: 362 FTYSSLINGFCMHD 375
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 182/365 (49%), Gaps = 3/365 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L ++ ++AL+LF G + + +Y SLI L + +L + +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I F +LI + K + +A ++++ M + +++SL++ +DR+D+AK
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
MF+ PN++++N +IKG K +E +F EM +R + VTY +LI
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRG-CKPQ 285
+ E A+ +F+ M+ G P+ +TY++L++GLC G+ E ++F+ R +P
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV-ETALVVFEYLQRSKMEPD 500
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+ + +++ + K GK+E+ L + + KP+VVTY +++ C++ EA +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
EM+ G P++ TY ++ LR D S +++ M + R T L+ +L G
Sbjct: 561 EMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDG 619
Query: 406 KVDDA 410
++D +
Sbjct: 620 RLDKS 624
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 174/375 (46%), Gaps = 12/375 (3%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F L+ K + D I + +M + L +++ L++ ++ A +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+G+ P++++ N ++ G +A + +M+E P T+N+LI L R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A L + M+ KG P+ VTY +++ GLC +G+ + A ++ M +P +V + ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
L + +A +L +EM + +P+VVTYN LI LC R ++A ++L++M
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
PN T+ ++D F++ + K+ + M+ P + T+S L+ G ++D+A +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSVMNVVDLLWTYL 473
E M + ++ + L+ C G+ R+M + ++V TY
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV--------TY- 434
Query: 474 GMGTCVVIDLFQKRE 488
T ++ FQ RE
Sbjct: 435 ---TTLIHGFFQARE 446
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 9/307 (2%)
Query: 148 SFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEM 207
S N L D+ ++DDA +F D K P+++ F+ ++ K +++ + ++M
Sbjct: 53 SINRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 107
Query: 208 LEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEY 267
+ + TY+ LI CR ++ A + M+K G P+ VT L+ G C
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 268 NEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNIL 327
++A ++ M G +P F L+ L + + EA +L+ M + +PD+VTY I+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 328 INYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRH 387
+N LCK A +L +M+ G +P Y ++D ++ +L + M
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 388 CPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLV 447
P + T++ L+ L G+ DA +L +M +RK+ ++ + L+ DA + +G LV
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI-DAFVKEGK---LV 343
Query: 448 EIRDMRD 454
E + D
Sbjct: 344 EAEKLYD 350
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 209/396 (52%), Gaps = 11/396 (2%)
Query: 51 LKEIRDPDEALSLFHRHHQMGS------KHSYPSYASLIYKLARARDFDAVETVLGYIQ- 103
L+ DP A+ LF + ++S Y +I KL ++ FD ++ VL +++
Sbjct: 16 LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT 75
Query: 104 DFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVD 163
D I E +F ++I +G+ L +A+ +F+ M + C RT++S NSLL L+ ++
Sbjct: 76 DTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELE 135
Query: 164 DAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLI 223
K D+ G +P+ ++N++I G + G +++A ++FDEM++++V PT VT+ +LI
Sbjct: 136 KMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 194
Query: 224 GFLCRTGEMGKAKGLFEDMIK-KGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRG- 281
LC+ + +A + DM+K G P YA L++ LC GE + A K+ D AY G
Sbjct: 195 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK-DEAYEGK 253
Query: 282 CKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAY 341
K + L+S L K G+ E +L EM ++ KPD VTYN+LIN C E+ + A
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 342 KVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGL 401
+VL EM G KP+ +Y M++ F R++ +E + + M P ++ + GL
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 402 LKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+G + ++A +L+EM + + EG + C
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLC 409
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 138/288 (47%), Gaps = 4/288 (1%)
Query: 78 SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRM 137
+Y LI+ +++ FD + + ++ F +LI K V +A+++ + M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 138 TSFDCVR-TLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGE 196
VR T+ + SL+ L + A ++ D+A + + + ++ +I +K G
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 197 WEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYAL 256
E S + +EM E+ P VTYN LI C + A + ++M++KG P+ ++Y +
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 257 LMEGLCFK-GEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKR 315
++ G+ F+ ++ EA + DM RGC P +++ ++ L + + EEA +L EM +
Sbjct: 334 IL-GVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK 392
Query: 316 QYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMV 363
YKP + LC+ + KV++ + G +A + +M+
Sbjct: 393 GYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMI 439
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 197/401 (49%), Gaps = 10/401 (2%)
Query: 44 PIPFVNDLKEI-------RDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P + D ++ ++ D +SLFH G H SY +I L R F
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+V+G + F SLI + + + V AI++ ++M + +N+++D
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
V+DA +FD ++ G R + +++N ++ G G W +A+R+ +M+ R++ P V
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
+T+ ++I + G+ +A L+E+M ++ P+ TY L+ GLC G +EAK+M+
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M +GC P +V + L++ K +++E L EM +R D +TYN +I + R
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSC 396
A ++ + M +PN TY +++ G E +L + M S + T++
Sbjct: 365 PDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 397 LLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++ G+ K G V+DA + + + ++ D+ ++ +++ C
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 172/350 (49%), Gaps = 36/350 (10%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARA-RDFDAVETVLGYIQDFNIRCKETLFISLI 118
ALS+ + + G + + +SLI + R FDA++ V +++ R ++ ++I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV-SKMEEMGFRPDVVIYNTII 181
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRT-LQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
K LV+ A+E+F+RM D VR ++NSL+ L + R DA R+ D
Sbjct: 182 DGSCKIGLVNDAVELFDRMER-DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
PN+I+F +I +K+G++ EA ++++EM R V P V TYNSLI LC G + +AK
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRG---------------- 281
+ + M+ KG P+ VTY L+ G C +E K+ +MA RG
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 282 ----------------CKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYN 325
+P + + +L+ L ++E+A L M+K + + D+ TYN
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 326 ILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGS 375
I+I+ +CK +A+ + + G KP+ +Y M+ GF R ++ S
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 161/380 (42%), Gaps = 71/380 (18%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+++ I++F +M + ++ F+ +L + + D +F + G +L S+N+
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLI-GFL------------------- 226
+I + + A V +M++ P VVT +SLI GF
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 227 ---------------CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAK 271
C+ G + A LF+ M + G +AVTY L+ GLC G +++A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 272 KMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYL 331
++M DM R P ++ F ++ K GK EA L EM +R PDV TYN LIN L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 332 CKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAM--------- 382
C R EA ++L M GC P+ TY +++GF + + + K+ M
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 383 -------------------------LTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
+ SR P + T+S LL GL +V+ A + E M
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 418 EKRKMRFDLKAWEGLVTDAC 437
+K ++ D+ + ++ C
Sbjct: 408 QKSEIELDITTYNIVIHGMC 427
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 148/297 (49%), Gaps = 3/297 (1%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
++A+ LF R + G + +Y SL+ L + + ++ + +I F ++
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + K +A++++ MT + ++NSL++ L + RVD+AK+M D G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
P+++++N +I G K +E +++F EM +R + +TYN++I + G A+
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
+F M + PN TY++L+ GLC +A + +M + + + +++ +
Sbjct: 371 IFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
K G +E+A L + + KPDVV+Y +I+ C++ + ++ + +MQ G P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 118/241 (48%)
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
EE +F +M++ P++V ++ ++ + ++ LF M G + +Y ++
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
+ LC + A ++ M G +P +V L++ + ++ +A L+S+M++ +
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLK 377
+PDVV YN +I+ CK +A ++ M+ G + +A TY +V G + + +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 378 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++ M+ P + TF+ ++ +K GK +A + EEM +R + D+ + L+ C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 438 I 438
+
Sbjct: 291 M 291
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 190/362 (52%), Gaps = 3/362 (0%)
Query: 78 SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRM 137
+Y +L+Y L + ++F+ ++ + E SL++ K +++A+ + R+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 138 TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEW 197
F L +N+L+D L + +A+ +FD K+G RPN ++++++I ++G+
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
+ A EM++ + +V YNSLI C+ G++ A+G +MI K P VTY L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
M G C KG+ N+A ++ +M +G P + F L+S L + G I +A L +EM +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLK 377
KP+ VTYN++I C+E ++A++ L EM G P+ +YR ++ G L + K
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG-LCLTGQASEAK 597
Query: 378 VLNAMLTSRHCPRLET-FSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDA 436
V L +C E ++ LL G + GK+++A V +EM +R + DL + G++ D
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY-GVLIDG 656
Query: 437 CI 438
+
Sbjct: 657 SL 658
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 179/372 (48%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L + R EA LF R ++G + + +Y+ LI R D + LG + D
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
++ + SLI + K + A M + T+ ++ SL+ +++ A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
R++ + G P++ +F ++ G + G +A ++F+EM E V P VTYN +I
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C G+M KA ++M +KG P+ +Y L+ GLC G+ +EAK + + C+
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
+ + L+ + GK+EEA S+ EM +R D+V Y +LI+ K + +L E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
M G KP+ Y M+D + DF+ + + + M+ P T++ ++ GL K G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 407 VDDACFVLEEME 418
V++A + +M+
Sbjct: 733 VNEAEVLCSKMQ 744
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 1/351 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D ALS G K S Y SLI + D A E + + + + + SL
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ Y ++KA+ +++ MT ++ +F +LL L + DA ++F++ +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+PN +++NVMI+G ++G+ +A EM E+ + P +Y LI LC TG+ +AK
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
+ + K N + Y L+ G C +G+ EA + +M RG LV +GVL+
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K + LL EM R KPD V Y +I+ K EA+ + M GC PN
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVD 408
TY +++G + + + + M P T+ C L +L G+VD
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVD 768
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 182/407 (44%), Gaps = 27/407 (6%)
Query: 54 IRDPDEALSLF-----HRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQD---- 104
I DP L F HR G HS S+ LI+ L +A F ++L +
Sbjct: 81 IDDPKLGLRFFNFLGLHR----GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALK 136
Query: 105 ----FNI------RCK---ETLFISLIQHYGKAHLVDKAIEVFNRM-TSFDCVRTLQSFN 150
FN+ +CK + F LIQHY ++ V + VF M T + +++ +
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLS 196
Query: 151 SLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLER 210
+LL LV A +F+D +G RP++ + +I+ + + A + M
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 211 EVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEA 270
+V YN LI LC+ ++ +A G+ +D+ K P+ VTY L+ GLC E+
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 271 KKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINY 330
+MM +M P L+ L KRGKIEEA +L+ + P++ YN LI+
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 331 LCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPR 390
LCK + EA + M G +PN TY +++D F R + +L L M+ +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 391 LETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ ++ L+ G K G + A + EM +K+ + + L+ C
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 166/360 (46%)
Query: 78 SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRM 137
+ ++L++ L + R F + + IR ++ +I+ + + +A E+ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 138 TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEW 197
+ C + +N L+D L +V +A + D +P+++++ ++ G K E+
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
E + DEML P+ +SL+ L + G++ +A L + ++ G PN Y L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
++ LC +++EA+ + M G +P V + +L+ +RGK++ A S L EM
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLK 377
K V YN LIN CK + A + EM +P TY ++ G+ +L+
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 378 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ + M P + TF+ LL GL + G + DA + EM + ++ + + ++ C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 183/392 (46%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L + R A+ LF+ +G + Y +I L +D + ++ +++
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ LI K V +A+ + + D + ++ +L+ L +
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
M D+ + F P+ + + +++G K+G+ EEA + +++ V P + YN+LI L
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C+ + +A+ LF+ M K G PN VTY++L++ C +G+ + A + +M G K +
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
+ L++ K G I A+ ++EM ++ +P VVTY L+ C + + +A ++ E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
M G P+ T+ ++ G R ++K+ N M P T++ ++ G + G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 407 VDDACFVLEEMEKRKMRFDLKAWEGLVTDACI 438
+ A L+EM ++ + D ++ L+ C+
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 176/394 (44%), Gaps = 1/394 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
++AL L+H G S ++ +L+ L RA + + ++N++ + +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I+ Y + + KA E MT V S+ L+ L + +AK D K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
N I + ++ G ++G+ EEA V EM++R V +V Y LI + + G
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
L ++M +G P+ V Y +++ G++ EA + M GC P V + +++ L
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K G + EA+ L S+M+ P+ VTY ++ L K + + L + G N A
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
TY M++ GF R E + +++ M+ P T++ ++ L + V A + M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 418 EKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRD 451
++ +R D A+ L+ C+ G G E+R+
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVA-GEMGKATELRN 881
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 169/393 (43%), Gaps = 6/393 (1%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDF-- 105
+ L E++D A + G + Y LI L + + V +G +D
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK---VWEAVGIKKDLAG 290
Query: 106 -NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDD 164
+++ + +L+ K + +E+ + M + + +SL++ L ++++
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 165 AKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIG 224
A + G PNL +N +I K ++ EA +FD M + + P VTY+ LI
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 225 FLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKP 284
CR G++ A +M+ G + Y L+ G C G+ + A+ M +M + +P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 285 QLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
+V + LM +GKI +A L EM + P + T+ L++ L + +A K+
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 345 TEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKG 404
EM KPN TY +M++G+ D + + L M P ++ L+ GL
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 405 GKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
G+ +A ++ + K + + GL+ C
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 41/343 (11%)
Query: 56 DPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFI 115
D +A + G SY LI+ L + + + N E +
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
L+ + + +++A+ V M L + L+D + + D K F +M
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID---GSLKHKDRKLFFGLLKEM 673
Query: 176 ---GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEM 232
G +P+ + + MI + K G+++EA ++D M+ P VTY ++I LC+ G +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 233 GKAK------------------GLFEDM-----------------IKKGTYPNAVTYALL 257
+A+ G F D+ I KG N TY +L
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
+ G C +G EA +++ M G P + + ++++L +R +++A L + M ++
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYR 360
+PD V YN LI+ C +A ++ EM G PN T R
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 184 FNVMIKGRLKKGEWEEASRVFDEMLER-EVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDM 242
F+++I+ ++ + VF M+ + + P V T ++L+ L + G A LF DM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 243 IKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKI 302
+ G P+ Y ++ LC + + AK+M+ M GC
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV------------------ 260
Query: 303 EEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMM 362
++V YN+LI+ LCK+ + EA + ++ KP+ TY +
Sbjct: 261 -----------------NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 363 VDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKM 422
V G +V++FE L++++ ML R P S L+ GL K GK+++A +++ + +
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 423 RFDLKAWEGLVTDACIG 439
+L + L+ C G
Sbjct: 364 SPNLFVYNALIDSLCKG 380
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 191/386 (49%), Gaps = 6/386 (1%)
Query: 58 DEALSLFHRHHQMGSKHSYPS---YASLIYKLARARDFDAVETVLGYIQDFNIRCKETLF 114
++AL+LF M H PS ++ L+ +A+ ++AV ++ +++ I F
Sbjct: 61 NDALTLFC---DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF 117
Query: 115 ISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADK 174
+LI + + + A+ +M ++ +F SL++ +R +A + D
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 175 MGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGK 234
+G+ PN++ +N +I +KG+ A V M + + P VVTYNSLI L +G G
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 235 AKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
+ + DM++ G P+ +T++ L++ +G+ EAKK +M R P +V + L++
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
L G ++EAK +L+ + + + P+ VTYN LIN CK R + K+L M G
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
+ TY + G+ + F + KVL M++ P + TF+ LL GL GK+ A L
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 415 EEMEKRKMRFDLKAWEGLVTDACIGD 440
E+++K K + + ++ C D
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKAD 443
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 186/394 (47%), Gaps = 7/394 (1%)
Query: 43 EPIPFVND-------LKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAV 95
P+P + D + ++ + +SLF +G H S+ +LI R
Sbjct: 74 HPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLA 133
Query: 96 ETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDI 155
+ LG + F SL+ + + +A+ + +++ + +N+++D
Sbjct: 134 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193
Query: 156 LVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPT 215
L + +V+ A + KMG RP+++++N +I G W ++R+ +M+ + P
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 216 VVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 275
V+T+++LI + G++ +AK + +MI++ PN VTY L+ GLC G +EAKK++
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 276 DMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKED 335
+ +G P V + L++ K ++++ +L M + D TYN L C+
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 336 RAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFS 395
+ + A KVL M G P+ T+ +++DG +L L + S+ + T++
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 396 CLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAW 429
++ GL K KV+DA ++ + + + D+ +
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 162/344 (47%), Gaps = 35/344 (10%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
ALS + ++G + S ++ SL+ F +++ I ++ ++I
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
+ V+ A++V M + ++NSL+ L + + R+ D +MG P
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
++I+F+ +I K+G+ EA + ++EM++R V P +VTYNSLI LC G + +AK +
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 240 EDMIKKGTYPNAVTYALLM-----------------------------------EGLCFK 264
++ KG +PNAVTY L+ +G C
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 265 GEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTY 324
G+++ A+K++ M G P + F +L+ L GKI +A L +++K + ++TY
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 325 NILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLR 368
NI+I LCK D+ +A+ + + + G P+ TY M+ G R
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 144/302 (47%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L E + AL + +MG + +Y SLI +L + + +L +
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I F +LI YGK + +A + +N M + ++NSL++ L + +D+AK
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
++ + GF PN +++N +I G K ++ ++ M V TYN+L
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C+ G+ A+ + M+ G +P+ T+ +L++GLC G+ +A + D+ +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
+ + +++ L K K+E+A L + + PDV+TY ++ L ++ EA+++ +
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRK 489
Query: 347 MQ 348
MQ
Sbjct: 490 MQ 491
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 129/277 (46%)
Query: 161 RVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYN 220
+ +DA +F D + P+++ F+ ++ K ++E +F + + + ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
+LI CR + A M+K G P+ VT+ L+ G C + EA ++ +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
G +P +V + ++ L ++G++ A +L MKK +PDVVTYN LI L +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
++L++M G P+ T+ ++D + + + K N M+ P + T++ L+ G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
L G +D+A VL + + + + L+ C
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC 335
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 191 RLKKG----EWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
RL+ G ++ +A +F +M E P++V ++ L+ + + + LF + G
Sbjct: 50 RLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
+ ++ L++ C + A + M G +P +V FG L++ + EA
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
SL+ ++ Y+P+VV YN +I+ LC++ + A VL M+ G +P+ TY ++
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ S ++L+ M+ P + TFS L+ K G++ +A EM +R + ++
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 427 KAWEGLVTDACI 438
+ L+ CI
Sbjct: 290 VTYNSLINGLCI 301
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 72 SKHSYP---SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVD 128
SK +P +Y +LI +A+ D +L + + + +L Q Y +A
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 129 KAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMI 188
A +V RM S + +FN LLD L D+ ++ A +D K +I++N++I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 189 KGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKK-GT 247
KG K + E+A +F + + V P V+TY +++ L R +A L+ M K+ G
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496
Query: 248 YP 249
P
Sbjct: 497 MP 498
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 186/380 (48%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D L L + G H+ + + +I R R + +G I F +L
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I V +A+E+ +RM TL + N+L++ L N +V DA + D + GF
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+PN +++ ++K K G+ A + +M ER++ V Y+ +I LC+ G + A
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF +M KG + + Y L+ G C+ G +++ K++ DM R P +V F L+
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K GK+ EA+ L EM +R PD VTY LI+ CKE++ +A +L M GC PN
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
T+ ++++G+ + + L++ M T++ L+ G + GK++ A + +EM
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 418 EKRKMRFDLKAWEGLVTDAC 437
R++R D+ +++ L+ C
Sbjct: 449 VSRRVRPDIVSYKILLDGLC 468
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 192/379 (50%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EAL L R +MG K + + +L+ L ++ + + + E + ++
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
+ K+ A+E+ +M ++ ++D L + +D+A +F++ + GF+
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
++I + +I+G G W++ +++ +M++R++ P VV +++LI + G++ +A+ L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
++MI++G P+ VTY L++G C + + ++A M+ M +GC P + F +L++ K
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
I++ L +M R D VTYN LI C+ + A ++ EM +P+ +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y++++DG + E +L++ + S+ + ++ ++ G+ KVDDA + +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 419 KRKMRFDLKAWEGLVTDAC 437
+ ++ D+K + ++ C
Sbjct: 520 LKGVKPDVKTYNIMIGGLC 538
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 170/360 (47%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
A+ L + + K Y+ +I L + D + ++ + ++ +LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
+ A D ++ M + +F++L+D V ++ +A+ + + + G P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
+ +++ +I G K+ + ++A+ + D M+ + P + T+N LI C+ + LF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKR 299
M +G + VTY L++G C G+ AK++ +M R +P +V++ +L+ L
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 300 GKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATY 359
G+ E+A + +++K + + D+ YNI+I+ +C + +A+ + + + G KP+ TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 360 RMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEK 419
+M+ G + + + M H P T++ L+ L G + ++EE+++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 134/251 (53%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ SLI + K + +DKA + + M S C +++FN L++ + +DD +F
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
G + +++N +I+G + G+ E A +F EM+ R V P +V+Y L+ LC GE
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
KA +FE + K + Y +++ G+C + ++A + + +G KP + + +++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
L K+G + EA L +M++ + P+ TYNILI E A ++ K++ E++ G
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 354 PNAATYRMMVD 364
+A+T +M+VD
Sbjct: 595 VDASTVKMVVD 605
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 151/310 (48%)
Query: 128 DKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVM 187
D A+++F MT L F+ L ++ + D + + G NL + ++M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 188 IKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGT 247
I + + A ++++ P VT+++LI LC G + +A L + M++ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 248 YPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKS 307
P +T L+ GLC G+ ++A ++ M G +P V +G ++ + K G+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 308 LLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFL 367
LL +M++R+ K D V Y+I+I+ LCK+ A+ + EM+I G K + Y ++ GF
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 368 RVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLK 427
++ K+L M+ + P + FS L+ +K GK+ +A + +EM +R + D
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 428 AWEGLVTDAC 437
+ L+ C
Sbjct: 354 TYTSLIDGFC 363
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 7/283 (2%)
Query: 170 DDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRT 229
D K+ +R L S V IK ++A +F EM P ++ ++ L + RT
Sbjct: 33 DGKGKVSYRERLRSGIVDIK-------EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 230 GEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNF 289
+ L + M KG N T ++++ C + + A M + G +P V F
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 290 GVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQI 349
L++ L G++ EA L+ M + +KP ++T N L+N LC + ++A ++ M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 350 GGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDD 409
G +PN TY ++ + ++++L M + +S ++ GL K G +D+
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 410 ACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDM 452
A + EME + + D+ + L+ C G +RDM
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 193/401 (48%), Gaps = 7/401 (1%)
Query: 44 PIPFVND-------LKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
PIP + D + ++ D + L+H+ +G H S+ LI+ R
Sbjct: 75 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+LG + R SL+ + + + +A+ + + M F V + +N++++ L
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
N +++A +F +K G R + +++N +I G G W +A+R+ +M++R++ P V
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
+ + +LI + G + +A+ L+++MI++ PN TY L+ G C G +AK M
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M +GC P +V + L++ K ++E+ L EM + D TYN LI+ C+ +
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSC 396
A KV M G P+ TY +++D E +L ++ + S + T++
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 397 LLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++ GL + K+ +A + + ++ ++ D A+ +++ C
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 176/383 (45%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D+A SLF Q S + ++ +A+ FD V + +++ I F L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + + + A+ + +M ++ + SLL+ +R +A + D D GF
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
PN++ +N +I G K + A VF M ++ + VTYN+LI L +G A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
L DM+K+ PN + + L++ +G EA+ + +M R P + + L++
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
G + +AK + M + PDVVTYN LI CK R + K+ EM G +A
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
TY ++ G+ + + KV N M+ P + T++ LL L GK++ A ++E++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 418 EKRKMRFDLKAWEGLVTDACIGD 440
+K +M D+ + ++ C D
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTD 443
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 154/312 (49%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
+N L + RD + AL +F+ + G + +Y +LI L+ + + +L + I
Sbjct: 191 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
F +LI + K + +A ++ M V + ++NSL++ + + DAK
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
MFD G P+++++N +I G K E+ ++F EM + + TYN+LI C
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ G++ A+ +F M+ G P+ VTY +L++ LC G+ +A M+ D+ ++
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ +++ L + K++EA L + ++ KPD + Y +I+ LC++ EA K+ M
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 348 QIGGCKPNAATY 359
+ G P+ Y
Sbjct: 491 KEDGFMPSERIY 502
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%)
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
SLI + + A +F+ M S C + ++N+L+ + RV+D ++F +
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G + ++N +I G + G+ A +VF+ M++ V P +VTYN L+ LC G++ KA
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+ ED+ K + +TY ++++GLC + EA + + +G KP + + ++S
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYN 325
L ++G EA L MK+ + P Y+
Sbjct: 474 LCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 119/251 (47%)
Query: 188 IKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGT 247
++ L ++++A +F EML+ P++V + ++ + + + L+ M G
Sbjct: 51 LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGI 110
Query: 248 YPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKS 307
+ ++ +L+ C + A ++ M G +P +V G L++ + + +EA S
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 308 LLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFL 367
L+ M + P+VV YN +IN LCK A +V M+ G + +A TY ++ G
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 368 RVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLK 427
+ + ++L M+ + P + F+ L+ +K G + +A + +EM +R + ++
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 428 AWEGLVTDACI 438
+ L+ CI
Sbjct: 291 TYNSLINGFCI 301
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 125/277 (45%)
Query: 161 RVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYN 220
+ DDA +F + + P+++ F ++ K +++ ++ +M + + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
LI CR + A L M+K G P+ VT L+ G C + EA ++ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
G P +V + +++ L K + A + M+K+ + D VTYN LI+ L R +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
++L +M PN + ++D F++ + + + M+ P + T++ L+ G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
G + DA ++ + M + D+ + L+T C
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 173/331 (52%), Gaps = 2/331 (0%)
Query: 109 CKETLFI--SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
C+ LF +++ K +D A+ + +M + + +++D L + V+DA
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+F + D G RPN++++N +I+ G W +ASR+ +M+ER++ P VVT+++LI
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
+ G++ +A+ L+++MIK+ P+ TY+ L+ G C +EAK M M + C P +
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
V + L+ K ++EE L EM +R + VTYN LI L + A K+ +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
M G P+ TY +++DG + E +L V + S+ P + T++ ++ G+ K GK
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 407 VDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
V+D + + + ++ ++ + +++ C
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 204/414 (49%), Gaps = 4/414 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R G + +Y +++ L + D D ++L ++ I ++ ++I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
V+ A+ +F M + + ++NSL+ L + R DA R+ D +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+++F+ +I +K+G+ EA +++DEM++R + P + TY+SLI C + +AK +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE MI K +PN VTY L++G C E ++ +M+ RG V + L+ L +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
G + A+ + +M PD++TY+IL++ LCK + +A V +Q +P+ T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +M++G + E + ++ P + ++ ++ G + G ++A + EM+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVE-IRDMRDYSMA--ISSVMNVVDLL 469
+ + + L+ A + DG+ E I++MR S++ V+++L
Sbjct: 563 EDGTLPNSGTYNTLIR-ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 183/415 (44%), Gaps = 35/415 (8%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D +SL R + + SY LI R VLG + SL
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 156
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ Y + +A+ + ++M + +FN+L+ L +++ +A + D G
Sbjct: 157 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+P+L ++ ++ G K+G+ + A + +M + ++ VV Y ++I LC + A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF +M KG PN VTY L+ LC G +++A +++ DM R P +V F L+
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K GK+ EA+ L EM KR PD+ TY+ LIN C DR EA + M C PN
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 358 TYRMMVDGFL---RVE--------------------------------DFEGSLKVLNAM 382
TY ++ GF RVE D + + K+ M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 383 LTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++ P + T+S LL GL K GK++ A V E ++K KM D+ + ++ C
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 158/314 (50%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D A+++F M + ++ FN LL + ++ D + + + +L S+N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+I ++ + A V +M++ P +VT +SL+ C + +A L + M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
PN VT+ L+ GL + +EA ++ M RGC+P L +G +++ L KRG I+ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
SLL +M+K + + DVV Y +I+ LC +A + TEM G +PN TY ++
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++L+ M+ + P + TFS L+ +K GK+ +A + +EM KR + D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 427 KAWEGLVTDACIGD 440
+ L+ C+ D
Sbjct: 361 FTYSSLINGFCMHD 374
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 183/364 (50%), Gaps = 1/364 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L ++ ++AL+LF G + + +Y SLI L + +L + +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I F +LI + K + +A ++++ M + +++SL++ +DR+D+AK
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
MF+ PN++++N +IKG K EE +F EM +R + VTYN+LI L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
+ G+ A+ +F+ M+ G P+ +TY++L++GLC G+ +A + + +P +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
+ +++ + K GK+E+ L + + KP+V+ Y +I+ C++ EA + E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
M+ G PN+ TY ++ LR D S +++ M + T S +++ +L G+
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS-MVINMLHDGR 619
Query: 407 VDDA 410
++ +
Sbjct: 620 LEKS 623
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 163/349 (46%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F L+ K + D I + RM + L S+N L++ ++ A +
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+G+ P++++ + ++ G EA + D+M E P VT+N+LI L +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A L + M+ +G P+ TY ++ GLC +G+ + A ++ M + +V + ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
L + +A +L +EM + +P+VVTYN LI LC R ++A ++L++M
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
PN T+ ++D F++ + K+ + M+ P + T+S L+ G ++D+A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSV 462
E M + ++ + L+ C G+ R+M + ++V
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 151/325 (46%), Gaps = 16/325 (4%)
Query: 133 VFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRL 192
V+ S+D R S N LLD+ ++DDA +F + + P+++ FN ++
Sbjct: 38 VYFSAASYD-YREKLSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIA 91
Query: 193 KKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAV 252
K +++ + + M + + +YN LI CR ++ A + M+K G P+ V
Sbjct: 92 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIV 151
Query: 253 TYALLMEGLCFKGEYNEAKKM---MFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLL 309
T + L+ G C +EA + MF M Y +P V F L+ L K EA +L+
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEY---QPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 310 SEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRV 369
M R +PD+ TY ++N LCK A +L +M+ G + + Y ++D
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 370 EDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAW 429
++ +L + M P + T++ L+ L G+ DA +L +M +RK+ ++ +
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 430 EGLVTDACIGDGNAGGLVEIRDMRD 454
L+ DA + +G LVE + D
Sbjct: 329 SALI-DAFVKEGK---LVEAEKLYD 349
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 20/417 (4%)
Query: 36 KTIRKTKEPIPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAV 95
+TI +T + L+ I+ P + L F G H S+ ++ L RAR+ +
Sbjct: 64 QTISRT----TVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVA 119
Query: 96 ETVLGYIQDFN---IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSL 152
L I+ + ++ ++ F SLI+ YG A L +++++F M ++ +FNSL
Sbjct: 120 RNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179
Query: 153 LDILVDNDRVDDAKRMFDDADKM-GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLERE 211
L IL+ R A +FD+ + G P+ +FN +I G K +EA R+F +M
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYH 239
Query: 212 VPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGT--YPNAVTYALLMEGLCFKGEYNE 269
P VVTYN++I LCR G++ A + M+KK T +PN V+Y L+ G C K E +E
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDE 299
Query: 270 AKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLL--SEMKKRQYKPDVVTYNIL 327
A + DM RG KP V + L+ L + + +E K +L + PD T+NIL
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNIL 359
Query: 328 INYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLN------A 381
I C A KV EM P++A+Y +++ +F+ + + N
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Query: 382 MLTSRHC-PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+L C P ++ + L GK A V ++ KR ++ D +++ L+T C
Sbjct: 420 LLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHC 475
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 184/416 (44%), Gaps = 61/416 (14%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLAR------ARD-FDAVETVLGYIQDFNIRCKE 111
E++ LF QMG S ++ SL+ L + A D FD + G D
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPD------S 209
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
F +LI + K +VD+A +F M + C + ++N+++D L +V A +
Sbjct: 210 YTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSG 269
Query: 172 ADKMG--FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL--- 226
K PN++S+ +++G K E +EA VF +ML R + P VTYN+LI L
Sbjct: 270 MLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Query: 227 ----------------------------------CRTGEMGKAKGLFEDMIKKGTYPNAV 252
C G + A +F++M+ +P++
Sbjct: 330 HRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSA 389
Query: 253 TYALLMEGLCFKGEYNEAKKMMFDMAYRG-------CKPQLVNFGVLMSDLGKRGKIEEA 305
+Y++L+ LC + E++ A+ + ++ + CKP + + L GK ++A
Sbjct: 390 SYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQA 449
Query: 306 KSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDG 365
+ + ++ KR + D +Y LI C+E + AY++L M P+ TY +++DG
Sbjct: 450 EKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 366 FLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA-CFVLEEMEKR 420
L++ + + L ML S + P TF +L L K +++ C V +EKR
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR 564
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 7/261 (2%)
Query: 184 FNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMI 243
FN +I+ G ++E+ ++F M + + P+V+T+NSL+ L + G G A LF++M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 244 KK-GTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKI 302
+ G P++ T+ L+ G C +EA ++ DM C P +V + ++ L + GK+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 303 EEAKSLLSEMKKRQ--YKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYR 360
+ A ++LS M K+ P+VV+Y L+ C + EA V +M G KPNA TY
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 361 MMVDGFLRVEDFEGSLKVL---NAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
++ G ++ +L N T+ P TF+ L+ G +D A V +EM
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTT-FAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 418 EKRKMRFDLKAWEGLVTDACI 438
K+ D ++ L+ C+
Sbjct: 380 LNMKLHPDSASYSVLIRTLCM 400
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 14/301 (4%)
Query: 55 RDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVL-GYIQDFNIRCKET- 112
++ DEA+ +FH G K + +Y +LI L+ A +D ++ +L G F +
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 113 LFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDA 172
F LI+ + A +D A++VF M + S++ L+ L + D A+ +F++
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 173 -------DKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREV--PPTVVTYNSLI 223
K +P ++N M + G+ ++A +VF ++++R V PP+ Y +LI
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLI 471
Query: 224 GFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCK 283
CR G+ A L M+++ P+ TY LL++GL GE A + M
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Query: 284 PQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKV 343
P F ++++L KR E+ L++ M +++ + ++ ++ L + +A+ +
Sbjct: 532 PVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLI 591
Query: 344 L 344
+
Sbjct: 592 V 592
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%)
Query: 216 VVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 275
+V L+G+LC ++ A L ++K + T ++EGLC ++EA +
Sbjct: 601 LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYN 660
Query: 276 DMAYRGCKPQLVNFGVLMSDLGKRGKIEE 304
++ G QL VL + L GK EE
Sbjct: 661 ELVELGNHQQLSCHVVLRNALEAAGKWEE 689
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 36/403 (8%)
Query: 71 GSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKA 130
G K ++ LI L RA +L + + + E F +++Q Y + +D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 131 IEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA------------------------- 165
+ + +M F C + S N ++ RV+DA
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 166 --------KRMFDDADKM---GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPP 214
K + D M G+ P++ ++N +I G K GE +EA V D+M+ R+ P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 215 TVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMM 274
VTYN+LI LC+ ++ +A L + KG P+ T+ L++GLC + A ++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 275 FDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKE 334
+M +GC+P + +L+ L +GK++EA ++L +M+ V+TYN LI+ CK
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 335 DRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETF 394
++ EA ++ EM++ G N+ TY ++DG + E + ++++ M+ P T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 395 SCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ LL +GG + A +++ M D+ + L++ C
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 187/383 (48%), Gaps = 9/383 (2%)
Query: 56 DPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIR----CKE 111
D D AL + + + G S S +++ + VE L +IQ+ + + +
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE---GRVEDALNFIQEMSNQDGFFPDQ 295
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
F +L+ KA V AIE+ + M + ++NS++ L V +A + D
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 172 ADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE 231
PN +++N +I K+ + EEA+ + + + + P V T+NSLI LC T
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 232 MGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGV 291
A LFE+M KG P+ TY +L++ LC KG+ +EA M+ M GC ++ +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 292 LMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGG 351
L+ K K EA+ + EM+ + VTYN LI+ LCK R +A +++ +M + G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 352 CKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC-PRLETFSCLLVGLLKGGKVDDA 410
KP+ TY ++ F R D + + ++ AM TS C P + T+ L+ GL K G+V+ A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 411 CFVLEEMEKRKMRFDLKAWEGLV 433
+L ++ + + A+ ++
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVI 617
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 179/382 (46%), Gaps = 2/382 (0%)
Query: 58 DEALSLFHRH-HQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFIS 116
DE LS+ + G K Y ++ L VE + + I+ + F
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
LI+ +AH + AI + M S+ V ++F +++ ++ +D A R+ + + G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLERE-VPPTVVTYNSLIGFLCRTGEMGKA 235
+ +S NV++ G K+G E+A EM ++ P T+N+L+ LC+ G + A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+ + M+++G P+ TY ++ GLC GE EA +++ M R C P V + L+S
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
L K ++EEA L + + PDV T+N LI LC A ++ EM+ GC+P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
TY M++D + +L +L M S + T++ L+ G K K +A + +
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 416 EMEKRKMRFDLKAWEGLVTDAC 437
EME + + + L+ C
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLC 516
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 7/378 (1%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
VN L + A+ + Q G +Y S+I L + + VL + +
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLD--ILVDNDRVDD 164
+ +LI K + V++A E+ +TS + + +FNSL+ L N RV
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV-- 418
Query: 165 AKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIG 224
A +F++ G P+ ++N++I KG+ +EA + +M +V+TYN+LI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 225 FLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKP 284
C+ + +A+ +F++M G N+VTY L++GLC +A ++M M G KP
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 285 QLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
+ L++ + G I++A ++ M +PD+VTY LI+ LCK R A K+L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 345 TEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC-PRLETFSCLLVGLLK 403
+Q+ G Y ++ G R ++ + ML P ++ + GL
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 404 -GGKVDDAC-FVLEEMEK 419
GG + +A F++E +EK
Sbjct: 659 GGGPIREAVDFLVELLEK 676
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 188/430 (43%), Gaps = 47/430 (10%)
Query: 45 IPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPS-YASLIYKLARARDFDAVETVLGYIQ 103
+ ++ L+ D AL LF+ + + P+ Y ++ +L R+ FD ++ +L ++
Sbjct: 51 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110
Query: 104 DFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMT-SFDCVRTLQSFNSLLDILVDNDRV 162
+ F+ LI+ Y + L D+ + V + M F +N +L++LVD +
Sbjct: 111 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN-- 168
Query: 163 DDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSL 222
S ++ K W + P V T+N L
Sbjct: 169 --------------------SLKLVEISHAKMSVWG-------------IKPDVSTFNVL 195
Query: 223 IGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGC 282
I LCR ++ A + EDM G P+ T+ +M+G +G+ + A ++ M GC
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 283 KPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQ-YKPDVVTYNILINYLCKEDRAAEAY 341
V+ V++ K G++E+A + + EM + + PD T+N L+N LCK A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 342 KVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGL 401
+++ M G P+ TY ++ G ++ + + +++VL+ M+T P T++ L+ L
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 402 LKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRD------- 454
K +V++A + + + + D+ + L+ C+ + + +MR
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435
Query: 455 --YSMAISSV 462
Y+M I S+
Sbjct: 436 FTYNMLIDSL 445
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 199/436 (45%), Gaps = 42/436 (9%)
Query: 44 PIP-------FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P ++ + +++ D +SL + ++G H+ +Y LI R
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+LG + SL+ Y + A+ + ++M +F +L+ L
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
+++ +A + D + G +PNL+++ V++ G K+G+ + A + ++M ++ V
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
V +N++I LC+ + A LF++M KG PN VTY+ L+ LC G +++A +++ D
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M + P LV F L+ K GK EA+ L +M KR PD+ TYN LIN C DR
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFL---RVE----------------------- 370
+A ++ M C P+ TY ++ GF RVE
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 371 ---------DFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRK 421
D + + KV M++ P + T+S LL GL GK++ A V + M+K +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 422 MRFDLKAWEGLVTDAC 437
++ D+ + ++ C
Sbjct: 426 IKLDIYIYTTMIEGMC 441
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 194/396 (48%), Gaps = 2/396 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R Q G + + +Y ++ L + D D +L ++ I +F ++I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K VD A+ +F M + + +++SL+ L R DA ++ D +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PNL++FN +I +K+G++ EA ++ D+M++R + P + TYNSLI C + KAK +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE M+ K +P+ TY L++G C + ++ +M++RG V + L+ L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
G + A+ + +M PD++TY+IL++ LC + +A +V MQ K +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y M++G + + + ++ P + T++ ++ GL + +A +L++M+
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVE-IRDMR 453
+ D + L+ A + DG+ E IR+MR
Sbjct: 493 EDGPLPDSGTYNTLIR-AHLRDGDKAASAELIREMR 527
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 154/292 (52%)
Query: 149 FNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEML 208
FN LL + + D + + ++G NL ++N++I ++ + A + +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 209 EREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYN 268
+ P++VT +SL+ C + A L + M++ G P+ +T+ L+ GL + +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 269 EAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILI 328
EA ++ M RGC+P LV +GV+++ L KRG I+ A +LL++M+ + + DVV +N +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 329 NYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC 388
+ LCK +A + EM+ G +PN TY ++ + + ++L+ M+ +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 389 PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGD 440
P L TF+ L+ +K GK +A + ++M KR + D+ + L+ C+ D
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
P++ FN ++ K +++ + ++M + + TYN LI CR ++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
M+K G P+ VT + L+ G C ++A ++ M G +P + F L+ L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
K EA +L+ M +R +P++VTY +++N LCK A+ +L +M+ + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
+ ++D + + +L + M T P + T+S L+ L G+ DA +L +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 419 KRKMRFDLKAWEGLVTDACIGDG 441
++K+ +L + L+ DA + +G
Sbjct: 248 EKKINPNLVTFNALI-DAFVKEG 269
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 118/231 (51%)
Query: 207 MLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGE 266
M++ P++ +N L+ + + + L E M + G N TY +L+ C + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 267 YNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNI 326
+ A ++ M G +P +V L++ +I +A +L+ +M + Y+PD +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 327 LINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSR 386
LI+ L ++A+EA ++ M GC+PN TY ++V+G + D + + +LN M ++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 387 HCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ F+ ++ L K VDDA + +EME + +R ++ + L++ C
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 193/382 (50%), Gaps = 6/382 (1%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIR-CKETL--FI 115
EA++L + +MG + ++ +L++ L + + + ++ ++ C+ L +
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
++I K D A+ + N+M + +++++D L VDDA +F + D
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G RP++ +++ +I G W +ASR+ +MLER++ P VVT+NSLI + G++ +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+ LF++MI++ PN VTY L+ G C +EA+++ M + C P +V + L++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
K K+ + L +M +R + VTY LI+ + A V +M G PN
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
TY ++DG + E ++ V + S+ P + T++ + G+ K GKV+D +
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 416 EMEKRKMRFDLKAWEGLVTDAC 437
+ + ++ D+ A+ +++ C
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFC 531
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 197/434 (45%), Gaps = 39/434 (8%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ + +++ D +S + +G H+ +Y +I L R +LG +
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
SL+ + + + +A+ + ++M +F +L+ L +++ +A
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+ + G +P+L+++ +I G K+GE + A + ++M + ++ VV Y+++I L
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C+ + A LF +M KG P+ TY+ L+ LC G +++A +++ DM R P +
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
V F L+ K GK+ EA+ L EM +R P++VTYN LIN C DR EA ++ T
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 347 MQIGGCKP-----------------------------------NAATYRMMVDGFLRVED 371
M C P N TY ++ GF + D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 372 FEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAW-- 429
+ + V M++ P + T++ LL GL K GK++ A V E ++K KM D+ +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 430 --EGLVTDACIGDG 441
EG+ + DG
Sbjct: 491 MSEGMCKAGKVEDG 504
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 192/424 (45%), Gaps = 36/424 (8%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
V+ L + EA++L R G + +Y ++I L + + D +L ++
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I ++ ++I K VD A+ +F M + + +++SL+ L + R DA
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
R+ D + PN+++FN +I K+G+ EA ++FDEM++R + P +VTYNSLI
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLC------------------------ 262
C + +A+ +F M+ K P+ VTY L+ G C
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 263 ----------FKGEYNEAKKMMF-DMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSE 311
F+ + +M+F M G P ++ + L+ L K GK+E+A +
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 312 MKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVED 371
++K + +PD+ TYNI+ +CK + + + + + + G KP+ Y M+ GF +
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 372 FEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEG 431
E + + M P T++ L+ L+ G + +++EM + D + G
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-G 594
Query: 432 LVTD 435
LVTD
Sbjct: 595 LVTD 598
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 167/317 (52%), Gaps = 1/317 (0%)
Query: 125 HL-VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLIS 183
HL +D+A+++F M ++ F+ LL + + D + + +G NL +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 184 FNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMI 243
+N+MI ++ + A + +M++ P++VT NSL+ C + +A L + M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 244 KKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIE 303
+ G P+ VT+ L+ GL + +EA ++ M +GC+P LV +G +++ L KRG+ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 304 EAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMV 363
A +LL++M+K + + DVV Y+ +I+ LCK +A + TEM G +P+ TY ++
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 364 DGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMR 423
+ + ++L+ ML + P + TF+ L+ K GK+ +A + +EM +R +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 424 FDLKAWEGLVTDACIGD 440
++ + L+ C+ D
Sbjct: 343 PNIVTYNSLINGFCMHD 359
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 177/361 (49%), Gaps = 1/361 (0%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
++ L + R D+AL+LF G + +Y+SLI L + +L + + I
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
F SLI + K + +A ++F+ M + ++NSL++ +DR+D+A++
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
+F P+++++N +I G K + + +F +M R + VTY +LI
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ + A+ +F+ M+ G +PN +TY L++GLC G+ +A + + +P +
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ ++ + K GK+E+ L + + KPDV+ YN +I+ CK+ EAY + +M
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 348 QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKV 407
+ G P++ TY ++ LR D S +++ M + R T+ L+ +L G++
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRL 605
Query: 408 D 408
D
Sbjct: 606 D 606
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 159/339 (46%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F L+ K D I +M L ++N +++ L ++ A +
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+G+ P++++ N ++ G EA + D+M+E P VT+ +L+ L + +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A L E M+ KG P+ VTY ++ GLC +GE + A ++ M + +V + ++
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
L K +++A +L +EM + +PDV TY+ LI+ LC R ++A ++L++M
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
PN T+ ++D F + + K+ + M+ P + T++ L+ G ++D+A +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDM 452
M + D+ + L+ C G+ RDM
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 9/328 (2%)
Query: 139 SFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWE 198
S+D R S N+LL + ++D+A +F + K P+++ F+ ++ K +++
Sbjct: 28 SYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD 82
Query: 199 EASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLM 258
++M V + TYN +I LCR ++ A + M+K G P+ VT L+
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 259 EGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYK 318
G C +EA ++ M G +P V F L+ L + K EA +L+ M + +
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 319 PDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKV 378
PD+VTY +IN LCK A +L +M+ G + + Y ++D + + +L +
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 379 LNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACI 438
M P + T+S L+ L G+ DA +L +M +RK+ ++ + L+ DA
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI-DAFA 321
Query: 439 GDGNAGGLVEIRDMRDYSMAISSVMNVV 466
+G L+E + D + S N+V
Sbjct: 322 KEGK---LIEAEKLFDEMIQRSIDPNIV 346
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 196/401 (48%), Gaps = 7/401 (1%)
Query: 44 PIPFVNDLK-------EIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P P + D +++ D +SL + +G ++ ++ +I
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
++LG + SL+ + + + V A+ + ++M + ++N+++D L
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
RV+DA F + ++ G RPN++++ ++ G W +A+R+ +M+++++ P V
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
+TY++L+ + G++ +AK LFE+M++ P+ VTY+ L+ GLC +EA +M
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M +GC +V++ L++ K ++E+ L EM +R + VTYN LI +
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSC 396
+A + ++M G P+ TY +++ G + E +L + M + T++
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 397 LLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++ G+ K GKV++A + + + ++ D+ + +++ C
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 182/383 (47%), Gaps = 6/383 (1%)
Query: 58 DEALSLFHRHHQMGSKHSYPS---YASLIYKLARARDFDAVETVLGYIQDFNIRCKETLF 114
++A+ LF M +PS + L+ + + + +D V ++ ++ IR F
Sbjct: 67 NDAIDLFS---DMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 115 ISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADK 174
+I + V A+ + +M + SL++ +RV DA + D +
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 175 MGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGK 234
+G++P+++++N +I K +A F E+ + + P VVTY +L+ LC +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 235 AKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
A L DMIKK PN +TY+ L++ G+ EAK++ +M P +V + L++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
L +I+EA + M + DVV+YN LIN CK R + K+ EM G
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
N TY ++ GF + D + + + + M P + T++ LL GL G+++ A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 415 EEMEKRKMRFDLKAWEGLVTDAC 437
E+M+KR+M D+ + ++ C
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMC 446
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 164/349 (46%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F L+ K D I + +M L +FN +++ +V A +
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+G+ P+ ++ ++ G ++ +A + D+M+E P +V YN++I LC+T +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
A F+++ +KG PN VTY L+ GLC +++A +++ DM + P ++ + L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
K GK+ EAK L EM + PD+VTY+ LIN LC DR EA ++ M GC
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
+ +Y +++GF + + E +K+ M T++ L+ G + G VD A
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSV 462
+M+ + D+ + L+ C LV DM+ M + V
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 8/346 (2%)
Query: 46 PFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDF 105
++ L + + ++A F + G + + +Y +L+ L + + +L +
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I + +L+ + K V +A E+F M + +++SL++ L +DR+D+A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
+MFD G +++S+N +I G K E+ ++F EM +R + VTYN+LI
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
+ G++ KA+ F M G P+ TY +L+ GLC GE +A + DM R
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+V + ++ + K GK+EEA SL + + KPD+VTY +++ LC + E + T
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRL 391
+M+ G N T + DG D S +++ ML+ + P L
Sbjct: 495 KMKQEGLMKNDCT---LSDG-----DITLSAELIKKMLSCGYAPSL 532
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%)
Query: 189 KGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTY 248
K RL+ + +A +F +M++ P++V +N L+ + + + L + M G
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 249 PNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSL 308
+ T+ +++ C + + A ++ M G +P V G L++ +R ++ +A SL
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 309 LSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLR 368
+ +M + YKPD+V YN +I+ LCK R +A+ E++ G +PN TY +V+G
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 369 VEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKA 428
+ + ++L+ M+ + P + T+S LL +K GKV +A + EEM + + D+
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 429 WEGLVTDACIGD 440
+ L+ C+ D
Sbjct: 298 YSSLINGLCLHD 309
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 146/302 (48%)
Query: 161 RVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYN 220
+++DA +F D K P+++ FN ++ +K +++ + +M + + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
+I C ++ A + M+K G P+ VT L+ G C + ++A ++ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
G KP +V + ++ L K ++ +A E++++ +P+VVTY L+N LC R ++A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
++L++M PN TY ++D F++ + ++ M+ P + T+S L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAIS 460
L ++D+A + + M + D+ ++ L+ C G+ R+M + +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 461 SV 462
+V
Sbjct: 365 TV 366
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 6/383 (1%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI---RCKETLF 114
++AL LF R S + L+ +A+ +D V ++ +Q I C +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 115 ISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADK 174
+ + + +A +M L +F SLL+ +R++DA +FD
Sbjct: 125 MHCVCLSSQPC---RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 175 MGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGK 234
MGF+PN++++ +I+ K A +F++M P VVTYN+L+ LC G G
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 235 AKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
A L DM+K+ PN +T+ L++ G+ EAK++ M P + +G L++
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
L G ++EA+ + M++ P+ V Y LI+ CK R + K+ EM G
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
N TY +++ G+ V + + +V N M + R P + T++ LL GL GKV+ A +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 415 EEMEKRKMRFDLKAWEGLVTDAC 437
E M KR+M ++ + ++ C
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMC 444
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 190/403 (47%), Gaps = 7/403 (1%)
Query: 42 KEPIPFVND-------LKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDA 94
P+P + D + ++ D +SLF + +G + +++ + +
Sbjct: 77 SRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCR 136
Query: 95 VETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLD 154
LG + F SL+ Y + ++ AI +F+++ + ++ +L+
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 155 ILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPP 214
L N ++ A +F+ G RPN++++N ++ G + G W +A+ + +M++R + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 215 TVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMM 274
V+T+ +LI + G++ +AK L+ MI+ YP+ TY L+ GLC G +EA++M
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 275 FDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKE 334
+ M GC P V + L+ K ++E+ + EM ++ + +TY +LI C
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 335 DRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETF 394
R A +V +M P+ TY +++DG E +L + M + T+
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 395 SCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ ++ G+ K GKV+DA + + + M+ ++ + +++ C
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%)
Query: 55 RDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLF 114
R + A+ LF++ GS+ + +Y +L+ L + +L + I F
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 115 ISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADK 174
+LI + K + +A E++N M + ++ SL++ L +D+A++MF ++
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 175 MGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGK 234
G PN + + +I G K E+ ++F EM ++ V +TY LI C G
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 235 AKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
A+ +F M + P+ TY +L++GLC G+ +A + M R +V + +++
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
+ K GK+E+A L + + KP+V+TY +I+ C+ EA + +M+ G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 355 NAATYR 360
N + Y+
Sbjct: 502 NESVYK 507
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 151/338 (44%), Gaps = 6/338 (1%)
Query: 143 VRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASR 202
+R S+ +L + N + +DA +F P++I F ++ K ++
Sbjct: 45 IRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVIS 104
Query: 203 VFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLC 262
+F++M +PP + T N ++ +C + + +A M+K G P+ VT+ L+ G C
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 263 FKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVV 322
+A + + G KP +V + L+ L K + A L ++M +P+VV
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 323 TYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAM 382
TYN L+ LC+ R +A +L +M +PN T+ ++D F++V + ++ N M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 383 LTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGN 442
+ P + T+ L+ GL G +D+A + ME+ + + L+ C
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 443 AGGLVEIRDMRDYSMAISSVMNVVDLLWTYLGMGTCVV 480
G+ +M + +++ +T L G C+V
Sbjct: 345 EDGMKIFYEMSQKGVVANTIT------YTVLIQGYCLV 376
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 175/346 (50%), Gaps = 2/346 (0%)
Query: 74 HSYPSYASLIYKLARARDFDAVETVLGYIQDFN-IRCKETLFISLIQHYGKAHLVDKAIE 132
HS SY L+ L ++ F + L +++N +F + + Y +A+L +A
Sbjct: 100 HSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACR 159
Query: 133 VFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRL 192
FNRM F + + LL L D V+ A+ F A G P+ +++++++G
Sbjct: 160 AFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA 219
Query: 193 KKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAV 252
+ + A +VFDEMLER ++ YN+L+ LC++G++ +F++M G P+A
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAY 279
Query: 253 TYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEM 312
++A+ + C G+ + A K++ M P + F ++ L K K+++A LL EM
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 313 KKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDF 372
++ PD TYN ++ Y C A K+L+ M C P+ TY M++ +R+ F
Sbjct: 340 IQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRF 399
Query: 373 EGSLKVLNAMLTSRHCPRLETFSCLLVGLL-KGGKVDDACFVLEEM 417
+ + ++ M + P + T++ ++ GL+ K GK+++AC E M
Sbjct: 400 DRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 1/307 (0%)
Query: 57 PDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFIS 116
P EA F+R + G K L++ L + + + G + F I +
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
L++ + + A +VF+ M +CV L ++N+LLD L + VD +MF + +G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
+P+ SF + I G+ A +V D M ++ P V T+N +I LC+ ++ A
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
L ++MI+KG P+ TY +M C E N A K++ M C P + +++ L
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLC-KEDRAAEAYKVLTEMQIGGCKPN 355
+ G+ + A + M +R++ P V TY ++I+ L K+ + EA + M G P
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPY 453
Query: 356 AATYRMM 362
+ T M+
Sbjct: 454 STTVEML 460
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 36/317 (11%)
Query: 141 DCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG-FRPNLISFNVMIKGRLKKGEWEE 199
D +L+S++ L++IL + + +A + F + F ++ + + E
Sbjct: 97 DFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSE 156
Query: 200 ASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEM-------GKAKG--------------- 237
A R F+ M+E + P V + L+ LC + GKAKG
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 238 -------------LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKP 284
+F++M+++ + + Y L++ LC G+ + KM +M G KP
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 285 QLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
+F + + G + A +L MK+ P+V T+N +I LCK ++ +AY +L
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 345 TEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKG 404
EM G P+ TY ++ + + K+L+ M ++ P T++ +L L++
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 405 GKVDDACFVLEEMEKRK 421
G+ D A + E M +RK
Sbjct: 397 GRFDRATEIWEGMSERK 413
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
V IRD A +F + +Y +L+ L ++ D D + + +
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
++ F I Y A V A +V +RM +D V + +FN ++ L N++VDDA
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+ D+ + G P+ ++N ++ E A+++ M + P TYN ++ L
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCF-KGEYNEAKKMMFDMAYRGCKPQ 285
R G +A ++E M ++ YP TY +++ GL KG+ EA + M G P
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPY 453
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKK 314
+L + L G+++ L +M++
Sbjct: 454 STTVEMLRNRLVGWGQMDVVDVLAGKMER 482
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%)
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
F M++ G P L+ LC K N A++ G P + +L+ +
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
A+ + EM +R D++ YN L++ LCK YK+ EM G KP+A +
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
+ + + + D + KVL+ M P + TF+ ++ L K KVDDA +L+EM
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 419 KRKMRFDLKAWEGLVTDAC 437
++ D + ++ C
Sbjct: 341 QKGANPDTWTYNSIMAYHC 359
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 4/387 (1%)
Query: 38 IRKTKEPIPFVNDLKEIRD-PDEALSLF-HRHHQMGSKHSYPSYASLIYKLARARDFDAV 95
I+ + + FV EIR+ PD A S F Q H+ Y SL+ LA A+D D +
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 96 ETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDI 155
V I+ F + +LI+ +GK +V++ + V+ +M TL ++N L++
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 156 LVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPT 215
LV VD A+R+F+ + +P+++++N MIKG K G+ ++A +M R
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 216 VVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 275
+TY ++I + G L+++M +KG ++L++ GLC +G+ NE +
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 276 DMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKED 335
+M +G KP + + VL+ K G +E+A LL M +KPDVVTY++++N LCK
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 336 RAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLE-TF 394
R EA + G N+ Y ++DG + + + ++ M + + C R +
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCY 470
Query: 395 SCLLVGLLKGGKVDDACFVLEEMEKRK 421
+ L+ K KVD+A + + ME+ +
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEE 497
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 35/293 (11%)
Query: 145 TLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVF 204
L+ + SL+D+L VD + + + K F + + N +IK K G EE V+
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 205 DEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFK 264
+M E + PT+ TYN L+ L + A+ +FE M P+ VTY +++G C
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 265 GEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTY 324
G+ +A + + DM RG + + + ++ +L EM ++ + +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 325 NILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLT 384
+++I LCKE + E Y V M G KPN A Y +++D
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID-------------------- 370
Query: 385 SRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
G K G V+DA +L M + D+ + +V C
Sbjct: 371 ---------------GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
++ LI Y K+ V+ AI + +RM + +++ +++ L N RV++A F
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 172 ADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE 231
G N + ++ +I G K G +EA R+F+EM E+ YN+LI + +
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 232 MGKAKGLFEDM-IKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAY-RGCKPQLVNF 289
+ +A LF+ M ++G TY +L+ G+ FK NE ++DM +G P F
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGM-FKEHRNEEALKLWDMMIDKGITPTAACF 541
Query: 290 GVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQI 349
L + L GK+ A +L E+ D + +IN LCK R EA K+ +
Sbjct: 542 RALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITE 600
Query: 350 GGCKPNAATYRMMVDGFLRVEDFEGSLKVLNA 381
G + +M++ +V + ++K++++
Sbjct: 601 RGREVPGRIRTVMINALRKVGKADLAMKLMHS 632
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 195/436 (44%), Gaps = 42/436 (9%)
Query: 44 PIP-------FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P ++ + +++ D +SL + ++G H+ +Y LI R
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+LG + SL+ Y + A+ + ++M +F +L+ L
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
+++ +A + D + G +PNL+++ V++ G K+G+ + A + ++M ++ V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
V Y+++I LC+ A LF +M KG PN +TY+ L+ LC +++A +++ D
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M R P +V F L+ K GK+ EA+ L EM KR PD+ TY+ LIN C DR
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAM-------------- 382
EA + M C PN TY +++GF + + + +++ M
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 383 -----LTSRHC----------------PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRK 421
+R C P + T++ LL GL K GK++ A V E +++ K
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 422 MRFDLKAWEGLVTDAC 437
M + + ++ C
Sbjct: 501 MEPTIYTYNIMIEGMC 516
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 192/382 (50%), Gaps = 6/382 (1%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKL-ARARDFDAVETVLGYIQDFNIRCKETL--FI 115
+A++L + +MG + ++ +LI+ L + +AV V +Q C+ L +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR---GCQPNLVTYG 229
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
++ K +D A + N+M + + +++++D L DDA +F + +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G RPN+I+++ +I W +ASR+ +M+ER++ P VVT+N+LI + G++ +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+ L+++MIK+ P+ TY+ L+ G C +EAK M M + C P +V + L++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
K +I+E L EM +R + VTY LI+ + A V +M G PN
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
TY ++DG + E ++ V + S+ P + T++ ++ G+ K GKV+D +
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 416 EMEKRKMRFDLKAWEGLVTDAC 437
+ + ++ D+ + +++ C
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFC 551
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 179/367 (48%), Gaps = 5/367 (1%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R Q G + + +Y ++ L + D D +L ++ I ++ ++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K D A+ +F M + + +++SL+ L + +R DA R+ D +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+++FN +I +K+G+ EA +++DEM++R + P + TY+SLI C + +AK +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE MI K +PN VTY L+ G C +E ++ +M+ RG V + L+ +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
+ A+ + +M P+++TYN L++ LCK + +A V +Q +P T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +M++G + E + ++ P + ++ ++ G + G ++A +
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF---- 563
Query: 419 KRKMRFD 425
RKMR D
Sbjct: 564 -RKMRED 569
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 167/314 (53%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D AI +F M + ++ FN LL + + D + + ++G NL ++N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+I ++ + A + +M++ P++VT +SL+ C + A L + M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
P+ +T+ L+ GL + +EA ++ M RGC+P LV +GV+++ L KRG I+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+LL++M+ + + +VV Y+ +I+ LCK +A + TEM+ G +PN TY ++
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
E + + ++L+ M+ + P + TF+ L+ +K GK+ +A + +EM KR + D+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 427 KAWEGLVTDACIGD 440
+ L+ C+ D
Sbjct: 366 FTYSSLINGFCMHD 379
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 156/311 (50%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
++ L + R D+AL+LF G + + +Y+SLI L + +L + + I
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
F +LI + K + +A ++++ M + +++SL++ +DR+D+AK
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
MF+ PN++++N +I G K +E +F EM +R + VTY +LI
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ + A+ +F+ M+ G +PN +TY L++GLC G+ +A + + +P +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ +++ + K GK+E+ L + + KPDV+ YN +I+ C++ EA + +M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 348 QIGGCKPNAAT 358
+ G P++ T
Sbjct: 567 REDGPLPDSGT 577
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 168/349 (48%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F L+ K D I + +M L ++N L++ ++ A +
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+G+ P++++ + ++ G +A + D+M+E P +T+ +LI L +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A L + M+++G PN VTY +++ GLC +G+ + A ++ M + +V + ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
L K ++A +L +EM+ + +P+V+TY+ LI+ LC +R ++A ++L++M
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
PN T+ ++D F++ + K+ + M+ P + T+S L+ G ++D+A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSV 462
E M + ++ + L+ C G+ R+M + ++V
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 126/251 (50%)
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+++ L + ++A +F M++ P++ +N L+ + + + L E M + G
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
N TY +L+ C + + + A ++ M G +P +V L++ +I +A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+L+ +M + Y+PD +T+ LI+ L ++A+EA ++ M GC+PN TY ++V+G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ D + + +LN M ++ + +S ++ L K DDA + EME + +R ++
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 427 KAWEGLVTDAC 437
+ L++ C
Sbjct: 296 ITYSSLISCLC 306
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 205/405 (50%), Gaps = 10/405 (2%)
Query: 40 KTKEPIPFVNDLKEIRDPDEALSLFH---RHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
K+ P + LK ++P A +LF RH G HS Y ++ +L+ R + V
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHP--GYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTS-FDCVRTLQSFNSLLDI 155
++ I+ +C E + +S+I+ YGK + D+A++VF RM F C ++S+N+LL+
Sbjct: 64 RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA 123
Query: 156 LVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPT 215
V+ + + +F + G PNL ++NV+IK KK E+E+A D M + P
Sbjct: 124 FVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183
Query: 216 VVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 275
V +Y+++I L + G++ A LF++M ++G P+ Y +L++G + ++ A + ++
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME-LW 242
Query: 276 D--MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCK 333
D + P + +++S L K G++++ + MK+ + + D+ TY+ LI+ LC
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 334 EDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLET 393
+A V E+ + TY M+ GF R + SL++ M ++ + +
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVS 361
Query: 394 FSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACI 438
++ L+ GLL+ GK+D+A + M + D + + C+
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 196/411 (47%), Gaps = 3/411 (0%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
++ L + D+ L ++ R Q + +Y+SLI+ L A + D E+V + +
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
+ +++ + + + +++E++ M + V + S+N L+ L++N ++D+A
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV-SYNILIKGLLENGKIDEATM 380
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
++ G+ + ++ + I G G +A V E+ V Y S+I LC
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ + +A L ++M K G N+ L+ GL EA + +M GC+P +V
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
++ +L+ L K GK EA + + EM + +KPD+ TY+IL+ LC++ + A ++ +
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 348 QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC-PRLETFSCLLVGLLKGGK 406
G + + + +++ G V + ++ V+ A + R+C L T++ L+ G K G
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVM-ANMEHRNCTANLVTYNTLMEGFFKVGD 619
Query: 407 VDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSM 457
+ A + M K ++ D+ ++ ++ C+ G + + D R++ +
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 122/250 (48%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ S+I K +++A + M+ N+L+ L+ + R+ +A +
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K G RP ++S+N++I G K G++ EAS EMLE P + TY+ L+ LCR ++
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
A L+ ++ G + + + +L+ GLC G+ ++A +M +M +R C LV + LM
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
K G A + M K +PD+++YN ++ LC + A + + + G
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 354 PNAATYRMMV 363
P T+ ++V
Sbjct: 672 PTVYTWNILV 681
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 54 IRDP--DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKE 111
IRD EA + G + + SY LI L +A F + + + +
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
+ L+ + +D A+E++++ + N L+ L ++DDA + +
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 172 ADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE 231
+ NL+++N +++G K G+ A+ ++ M + + P +++YN+++ LC
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 232 MGKAKGLFEDMIKKGTYPNAVTYALLMEGL 261
+ A F+D G +P T+ +L+ +
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 196/396 (49%), Gaps = 2/396 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R Q G + + +Y ++ L + D D +L ++ I +F ++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K VD A+ +F M + + +++SL+ L R DA ++ D +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PNL++FN +I +K+G++ EA +++D+M++R + P + TYNSL+ C + KAK +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE M+ K +P+ VTY L++G C + ++ +M++RG V + L+ L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
G + A+ + +M PD++TY+IL++ LC + +A +V MQ K +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y M++G + + + ++ P + T++ ++ GL + +A +L++M+
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVE-IRDMR 453
+ + + L+ A + DG+ E IR+MR
Sbjct: 568 EDGPLPNSGTYNTLIR-AHLRDGDKAASAELIREMR 602
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 197/436 (45%), Gaps = 42/436 (9%)
Query: 44 PIP-------FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P ++ + +++ D +SL + ++ H +Y LI R
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+LG + SL+ Y + A+ + ++M +F +L+ L
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
+++ +A + D + G +PNL+++ V++ G K+G+ + A + ++M ++ V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
V +N++I LC+ + A LF++M KG PN VTY+ L+ LC G +++A +++ D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M + P LV F L+ K GK EA+ L +M KR PD+ TYN L+N C DR
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFL---RVE----------------------- 370
+A ++ M C P+ TY ++ GF RVE
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 371 ---------DFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRK 421
D + + KV M++ P + T+S LL GL GK++ A V + M+K +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 422 MRFDLKAWEGLVTDAC 437
++ D+ + ++ C
Sbjct: 501 IKLDIYIYTTMIEGMC 516
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 161/314 (51%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D AI +F M + ++ FN LL + + D + + ++ L ++N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+I ++ + A + +M++ P++VT +SL+ C + A L + M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
P+ +T+ L+ GL + +EA ++ M RGC+P LV +GV+++ L KRG + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+LL++M+ + + DVV +N +I+ LCK +A + EM+ G +PN TY ++
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++L+ M+ + P L TF+ L+ +K GK +A + ++M KR + D+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 427 KAWEGLVTDACIGD 440
+ LV C+ D
Sbjct: 366 FTYNSLVNGFCMHD 379
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 1/281 (0%)
Query: 161 RVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYN 220
++DDA +F K P+++ FN ++ K +++ + ++M E+ + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
LI CR ++ A L M+K G P+ VT + L+ G C ++A ++ M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
G +P + F L+ L K EA +L+ M +R +P++VTY +++N LCK A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
+L +M+ + + + ++D + + +L + M T P + T+S L+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDG 441
L G+ DA +L +M ++K+ +L + L+ DA + +G
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALI-DAFVKEG 344
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 189/405 (46%), Gaps = 38/405 (9%)
Query: 51 LKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCK 110
L + + DEA S + G K + +Y + I A +F + + + +++ +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 111 ETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFD 170
+ L LI Y K V +A + M + +++ L++ L ND+VDDA+ +F
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 171 DADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTG 230
+ G P++ S+ V+I G K G ++AS +FDEM+E + P V+ YN L+G CR+G
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 231 EMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKM----------------- 273
E+ KAK L ++M KG +PNAVTY +++G C G+ EA ++
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 274 -----------------MFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQ 316
+F +GC F L++ + K GK E +L+ +
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 317 Y----KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDF 372
+ KP+ VTYNI+I+YLCKE A ++ +MQ P TY +++G+ ++
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 373 EGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
V + + + P +S ++ LK G A ++++M
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 161/333 (48%)
Query: 78 SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRM 137
+Y +++ + + D D ++ + R ++ +LI+ + + A+ V M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 138 TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEW 197
+ +NSL+ L R+D+A+ + + G +PN ++ I G ++ E+
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
A + EM E V P V LI C+ G++ +A + M+ +G +A TY +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
M GL + ++A+++ +M +G P + ++GVL++ K G +++A S+ EM +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLK 377
P+V+ YN+L+ C+ +A ++L EM + G PNA TY ++DG+ + D + +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 378 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
+ + M P ++ L+ G + V+ A
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 196/426 (46%), Gaps = 35/426 (8%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L +I+ ++A SL +G +Y+ LI L + R+ DA + ++ +
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLD------------ 154
I K ++ I K +++KA +F+ M + + Q++ SL++
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402
Query: 155 -ILVDNDR----------------------VDDAKRMFDDADKMGFRPNLISFNVMIKGR 191
+LV+ + +D A + + G RPN++ + +IK
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 192 LKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNA 251
L+ + +A RV EM E+ + P + YNSLI L + M +A+ +M++ G PNA
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 252 VTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSE 311
TY + G E+ A K + +M G P V L+++ K+GK+ EA S
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 312 MKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVED 371
M + D TY +L+N L K D+ +A ++ EM+ G P+ +Y ++++GF ++ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 372 FEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEG 431
+ + + + M+ P + ++ LL G + G+++ A +L+EM + + + +
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 432 LVTDAC 437
++ C
Sbjct: 703 IIDGYC 708
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 164/377 (43%), Gaps = 44/377 (11%)
Query: 98 VLGYIQDFNIRCKETLFISLIQHYGKAHL-VDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
++ + + N++ + + + + A L VD A+++ M V +++ L+D L
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
R++DAK + + D +G + +++++I G LK + A + EM+ +
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEG---------------- 260
Y+ I + + G M KAK LF+ MI G P A YA L+EG
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 261 -------------------LCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGK 301
+C G+ + A ++ +M GC+P +V + L+ + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 302 IEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRM 361
+A +L EMK++ PD+ YN LI L K R EA L EM G KPNA TY
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 362 MVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLL----KGGKVDDACFVLEEM 417
+ G++ +F + K + M R C L L GL+ K GKV +AC M
Sbjct: 528 FISGYIEASEFASADKYVKEM---RECGVLPN-KVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 418 EKRKMRFDLKAWEGLVT 434
+ + D K + L+
Sbjct: 584 VDQGILGDAKTYTVLMN 600
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 182/427 (42%), Gaps = 49/427 (11%)
Query: 52 KEIRDPDEALSLFHR-HHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN---- 106
K + DP + LS F+ Q ++ S++ L L F+ +V+ + + N
Sbjct: 72 KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVA 131
Query: 107 ------IRCKE---------TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNS 151
+RC + LF L Y +++A+ VF+ + V L
Sbjct: 132 EVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191
Query: 152 LLDILVDNDRVDDAKRMFDDADKMGFRPNLI----SFNVMIKGRLKKG------------ 195
LLD L+ +R+D +F D K N++ +++++I + G
Sbjct: 192 LLDALLRWNRLD----LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT 247
Query: 196 --EWEEAS-------RVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
E+ A+ ++ + M+ + + P TY+ LI LC+ + AK L +M G
Sbjct: 248 EKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
+ TY+LL++GL + AK ++ +M G + + + + K G +E+AK
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+L M P Y LI C+E + Y++L EM+ + TY +V G
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
D +G+ ++ M+ S P + ++ L+ L+ + DA VL+EM+++ + D+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 427 KAWEGLV 433
+ L+
Sbjct: 488 FCYNSLI 494
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 145/352 (41%), Gaps = 45/352 (12%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N ++ + +A S+F + G + Y L+ R+ + + + +L +
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ + ++I Y K+ + +A +F+ M V + +L+D + V+ A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLE----REVPPTVVTYNSL 222
+F +K G + FN +I K G+ E + V + +++ R P VTYN +
Sbjct: 753 TIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 223 IGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGC 282
I +LC+ G + AK LF M P +TY L+ G +D
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG--------------YD------ 851
Query: 283 KPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYK 342
K G+ E + E +PD + Y+++IN KE +A
Sbjct: 852 ---------------KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 343 VLTEMQI-----GGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCP 389
++ +M GCK + +T R ++ GF +V + E + KV+ M+ ++ P
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 21/277 (7%)
Query: 182 ISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFED 241
+ F ++ G + KG EEA VF + E+ P + L+ L R + +++
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 242 MIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF---------------------DMAYR 280
M+++ + TY +L+ C G K ++F M +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
G P + VL+ L K ++E+AKSLL EM D TY++LI+ L K A A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
++ EM G Y + + E + + + M+ S P+ + ++ L+ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ V +L EM+KR + + +V C
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 285 QLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
+L +F L DL G E+A S++ M +R + V +I+ R ++ +
Sbjct: 96 KLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV--------RCSQEFV-- 145
Query: 345 TEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKG 404
G + + ++ DG++ E ++ V ++ + PRL LL LL+
Sbjct: 146 ------GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199
Query: 405 GKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++D V + M +R + FD+K + L+ C
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHC 232
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 194/379 (51%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L R +M + + ++LI L ++ + ++ + E + ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K+ A+++F +M + ++ ++ ++D L + DDA +F++ + G +
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
++++++ +I G G+W++ +++ EM+ R + P VVT+++LI + G++ +AK L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
+ +MI +G P+ +TY L++G C + +EA +M M +GC+P +V + +L++ K
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
++++ L E+ + P+ +TYN L+ C+ + A ++ EM G P+ T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +++DG + +L++ M SR + ++ ++ G+ KVDDA + +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 419 KRKMRFDLKAWEGLVTDAC 437
+ ++ D+ + ++ C
Sbjct: 518 DKGVKPDVVTYNVMIGGLC 536
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 172/325 (52%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D+ALSLF+ G K +Y+SLI L +D +L + NI F +L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + K + +A E++N M + ++NSL+D + + +A +MFD G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
P++++++++I K ++ R+F E+ + + P +TYN+L+ C++G++ AK
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF++M+ +G P+ VTY +L++GLC GE N+A ++ M + + +++ +
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K+++A SL + + KPDVVTYN++I LCK+ +EA + +M+ GC P+
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAM 382
TY +++ L S++++ M
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEM 586
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 186/379 (49%), Gaps = 1/379 (0%)
Query: 71 GSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKA 130
G +H + +I R + +VLG F +L+ + V +A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 131 IEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKG 190
+ + +RM L + ++L++ L RV +A + D + GF+P+ +++ ++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 191 RLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPN 250
K G A +F +M ER + +VV Y+ +I LC+ G A LF +M KG +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 251 AVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLS 310
VTY+ L+ GLC G++++ KM+ +M R P +V F L+ K GK+ EAK L +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 311 EMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVE 370
EM R PD +TYN LI+ CKE+ EA ++ M GC+P+ TY ++++ + + +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 371 DFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWE 430
+ +++ + + P T++ L++G + GK++ A + +EM R + + +
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY- 458
Query: 431 GLVTDACIGDGNAGGLVEI 449
G++ D +G +EI
Sbjct: 459 GILLDGLCDNGELNKALEI 477
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 181/373 (48%)
Query: 46 PFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDF 105
P +N L + + AL LF + + K S Y+ +I L + FD ++ ++
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I+ + SLI D ++ M + + + +F++L+D+ V ++ +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
K ++++ G P+ I++N +I G K+ EA+++FD M+ + P +VTY+ LI
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
C+ + LF ++ KG PN +TY L+ G C G+ N AK++ +M RG P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+V +G+L+ L G++ +A + +M+K + + YNI+I+ +C + +A+ +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
+ G KP+ TY +M+ G + + + M P T++ L+ L G
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 406 KVDDACFVLEEME 418
+ + ++EEM+
Sbjct: 575 GLISSVELIEEMK 587
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 197/413 (47%), Gaps = 2/413 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EAL L R + G + +Y ++ +L ++ + + +++ NI+ + +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K D A+ +FN M + +++SL+ L ++ + DD +M +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
P++++F+ +I +K+G+ EA +++EM+ R + P +TYNSLI C+ + +A +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
F+ M+ KG P+ VTY++L+ C ++ ++ +++ +G P + + L+ +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
GK+ AK L EM R P VVTY IL++ LC +A ++ +MQ
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +++ G + + + ++ P + T++ ++ GL K G + +A + +M+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 419 KRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMR--DYSMAISSVMNVVDLL 469
+ D + L+ G G + I +M+ +S S++ V+D+L
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
V+ AI++F M + T FN L + + D + G ++ + +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
MI +K + A V + P +T+++L+ C G + +A L + M++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
P+ VT + L+ GLC KG +EA ++ M G +P V +G +++ L K G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
L +M++R K VV Y+I+I+ LCK+ +A + EM++ G K + TY ++ G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
++ K+L M+ P + TFS L+ +K GK+ +A + EM R + D
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 427 KAWEGLVTDAC 437
+ L+ C
Sbjct: 351 ITYNSLIDGFC 361
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 235 AKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
A LFE MI+ P + + L + +Y+ M G + + ++++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
++ K+ A S+L K Y+PD +T++ L+N C E R +EA ++ M +P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
+ T +++G +L +++ M+ P T+ +L L K G A +
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 415 EEMEKRKMRFDLKAWEGLVTDACIGDGN 442
+ME+R ++ + + +V D+ DG+
Sbjct: 234 RKMEERNIKASVVQYS-IVIDSLCKDGS 260
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%)
Query: 268 NEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNIL 327
N+A + M P ++F L S + + + + M+ + D+ T I+
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 328 INYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRH 387
IN C++ + A+ VL G +P+ T+ +V+GF ++ +++ M+ +
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 388 CPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLV 447
P L T S L+ GL G+V +A +++ M + + D + ++ C +A L
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 448 EIRDMRDYSMAISSV 462
R M + ++ S V
Sbjct: 232 LFRKMEERNIKASVV 246
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 185/361 (51%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L + Q G + +Y +++ L + D D ++L ++ I ++ ++I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K +D A+ +F M + + +++SL+ L + R DA R+ D +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+++F+ +I +K+G+ EA +++DEM++R + P + TY+SLI C + +AK +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE MI K +PN VTY+ L++G C E ++ +M+ RG V + L+ +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
+ A+ + +M P+++TYNIL++ LCK + A+A V +Q +P+ T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +M++G + E ++ + P + ++ ++ G + G ++A +L++M+
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 419 K 419
+
Sbjct: 566 E 566
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 35/413 (8%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
+SL + +G H +Y+ I R VL + SL+
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
Y + + A+ + ++M +F +L+ L +++ +A + D + G +P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
+L+++ ++ G K+G+ + A + +M + ++ VV YN++I LC+ M A LF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKR 299
+M KG P+ TY+ L+ LC G +++A +++ DM R P +V F L+ K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 300 GKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATY 359
GK+ EA+ L EM KR PD+ TY+ LIN C DR EA + M C PN TY
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 360 RMMVDGFLRVEDFEGSLKVLNAM-------------------LTSRHC------------ 388
++ GF + + E +++ M +R C
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 389 ----PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
P + T++ LL GL K GK+ A V E +++ M D+ + ++ C
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 16/420 (3%)
Query: 49 NDLKEIRDPDEALSLFHRHHQMGSKHSYPS---YASLIYKLARARDFDAVETVLGYIQDF 105
N L +I D+A+ LF M +PS + L+ +A+ F+ V ++ +Q
Sbjct: 56 NRLSDIIKVDDAVDLFG---DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I + I + + + A+ V +M + + +SLL+ + R+ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
+ D +MG++P+ +F +I G + EA + D+M++R P +VTY +++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
LC+ G++ A L + M K + V Y +++GLC ++A + +M +G +P
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+ + L+S L G+ +A LLS+M +R+ P+VVT++ LI+ KE + EA K+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
EM P+ TY +++GF + + + + M++ P + T+S L+ G K
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 406 KVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSVMNV 465
+V++ + EM +R GLV + G + RD + M +++V
Sbjct: 413 RVEEGMELFREMSQR----------GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 180/364 (49%), Gaps = 1/364 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
++ L + + D+AL+LF G + +Y+SLI L + +L + +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I F +LI + K + +A ++++ M + +++SL++ +DR+D+AK
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
MF+ PN+++++ +IKG K EE +F EM +R + VTY +LI
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
+ + A+ +F+ M+ G +PN +TY +L++GLC G+ +A + + +P +
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
+ +++ + K GK+E+ L + + P+V+ YN +I+ C++ EA +L +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
M+ G PN+ TY ++ LR D E S +++ M + T L+ +L G+
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGR 622
Query: 407 VDDA 410
+D +
Sbjct: 623 LDKS 626
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%)
Query: 291 VLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIG 350
+L + L K+++A L +M K + P +V +N L++ + K ++ + +MQ
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 351 GCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
G + TY + ++ F R +L VL M+ + P + T S LL G ++ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 411 CFVLEEMEKRKMRFDLKAWEGLV 433
++++M + + D + L+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLI 195
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 176/378 (46%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
+SL + +G H +Y+ I R VL + SL+
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
Y + + A+ + ++M +F +L+ L +++ +A + D + G +P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
+L+++ ++ G K+G+ + A + ++M + VV +N++I LC+ + A LF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKR 299
+M KG PN VTY L+ LC G +++A +++ +M + P +V F L+ K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 300 GKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATY 359
GK+ EA+ L EM +R PD +TYN+LIN C +R EA ++ M C PN TY
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 360 RMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEK 419
+++GF + + E +++ M T++ ++ G + G D A V ++M
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 420 RKMRFDLKAWEGLVTDAC 437
++ D+ + L+ C
Sbjct: 462 NRVPTDIMTYSILLHGLC 479
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 186/393 (47%), Gaps = 4/393 (1%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
AL++ + ++G + + +SL+ ++ ++ + + + F +LI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
+ +A+ + ++M C L ++ ++++ L +D A + + + +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
N++ FN +I K E A +F EM + + P VVTYNSLI LC G A L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKR 299
+M++K PN VT+ L++ +G+ EA+K+ +M R P + + +L++
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 300 GKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATY 359
+++EAK + M + P++ TYN LIN CK R + ++ EM G N TY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 360 RMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEK 419
++ GF + D + + V M+++R + T+S LL GL GK+D A + + ++K
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 420 RKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDM 452
+M ++ + ++ C AG + E D+
Sbjct: 497 SEMELNIFIYNTMIEGMC----KAGKVGEAWDL 525
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 181/377 (48%), Gaps = 6/377 (1%)
Query: 49 NDLKEIRDPDEALSLFHRHHQMGSKHSYPS---YASLIYKLARARDFDAVETVLGYIQDF 105
N L +I D+A+ LF M +PS + L+ +A+ F+ V ++ +Q
Sbjct: 56 NRLSDIIKVDDAVDLFG---DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I + I + + + A+ V +M + + +SLL+ + R+ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
+ D +MG++P+ +F +I G + EA + D+M++R P +VTY +++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
LC+ G++ A L M N V + +++ LC A + +M +G +P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+V + L++ L G+ +A LLS M +++ P+VVT+N LI+ KE + EA K+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
EM P+ TY ++++GF + + ++ M++ P ++T++ L+ G K
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 406 KVDDACFVLEEMEKRKM 422
+V+D + EM +R +
Sbjct: 413 RVEDGVELFREMSQRGL 429
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
VD A+++F M ++ FN LL + ++ + + + +G +L ++++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
I ++ + A V +M++ P +VT +SL+ C + + A L + M++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
P+ T+ L+ GL + +EA ++ M RGC+P LV +G +++ L KRG I+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+LL++M+ + K +VV +N +I+ LCK A + TEM+ G +PN TY +++
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++L+ ML + P + TF+ L+ K GK+ +A + EEM +R + D
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 427 KAWEGLVTDACI 438
+ L+ C+
Sbjct: 364 ITYNLLINGFCM 375
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 180/419 (42%), Gaps = 68/419 (16%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA++L + Q G + +Y +++ L + D D +L ++ I+ +F ++I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
K V+ A+++F M + + ++NSL++ L + R DA R+ + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+++FN +I K+G+ EA ++ +EM++R + P +TYN LI C + +AK +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 239 FEDMIKK-----------------------------------GTYPNAVTYALLMEGLCF 263
F+ M+ K G N VTY +++G
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 264 KGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQ------- 316
G+ + A+ + M ++ + +L+ L GK++ A + ++K +
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 317 -------------------------YKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGG 351
KPDVVTYN +I+ LC + EA + +M+ G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 352 CKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
PN+ TY ++ LR D S +++ M +S T S L+ +L G++D +
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS 623
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 5/292 (1%)
Query: 150 NSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLE 209
N L DI+ +VDDA +F D K P+++ FN ++ K ++E + ++M
Sbjct: 56 NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 210 REVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNE 269
+ + TY+ I CR ++ A + M+K G P+ VT + L+ G C ++
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 270 AKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILIN 329
A ++ M G KP F L+ L K EA +L+ +M +R +PD+VTY ++N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 330 YLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCP 389
LCK A +L +M+ K N + ++D + E ++ + M T P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 390 RLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDG 441
+ T++ L+ L G+ DA +L M ++K+ ++ + L+ DA +G
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI-DAFFKEG 342
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%)
Query: 291 VLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIG 350
+L + L K+++A L +M K + P +V +N L++ + K ++ + +MQ
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 351 GCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
G + TY + ++ F R +L VL M+ + P + T S LL G ++ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 411 CFVLEEMEKRKMRFDLKAWEGLV 433
++++M + + D + L+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLI 195
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 183/372 (49%), Gaps = 1/372 (0%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
VN ++ + +EA + + G + +Y SLI + +D D+ V +
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
R E + LI A +D+A+++F +M +C T++++ L+ L ++R +A
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
+ + ++ G +PN+ ++ V+I + ++E+A + +MLE+ + P V+TYN+LI C
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ G + A + E M + PN TY L++G C K ++A ++ M R P +V
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVV 463
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ L+ + G + A LLS M R PD TY +I+ LCK R EA + +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 348 QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKV 407
+ G PN Y ++DG+ + + + +L ML+ P TF+ L+ GL GK+
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 408 DDACFVLEEMEK 419
+A + E+M K
Sbjct: 584 KEATLLEEKMVK 595
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 197/427 (46%), Gaps = 32/427 (7%)
Query: 56 DPDEALSLFHRHHQMGS-KHSYPSYASLIYKLARARDFDAVETVLGYIQD-FNIRCKETL 113
DP AL+ H Q KHS SYASL+ L GY+ F IR L
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINN----------GYVGVVFKIR---LL 148
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTL--QSFNSLLDILVDNDRVDDAKRMFDD 171
I G A V N+ F+ L +N+LL+ L VD+ K+++ +
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 172 ADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE 231
+ PN+ ++N M+ G K G EEA++ +++E + P TY SLI C+ +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 232 MGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGV 291
+ A +F +M KG N V Y L+ GLC +EA + M C P + + V
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 292 LMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGG 351
L+ L + EA +L+ EM++ KP++ TY +LI+ LC + + +A ++L +M G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 352 CKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDAC 411
PN TY +++G+ + E ++ V+ M + + P T++ L+ G K V A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 412 FVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSVMN---VVDL 468
VL +M +RK+ D+ + L+ C GN D + + S+MN +V
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQC-RSGNF----------DSAYRLLSLMNDRGLVPD 496
Query: 469 LWTYLGM 475
WTY M
Sbjct: 497 QWTYTSM 503
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 182/432 (42%), Gaps = 54/432 (12%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLG-------------YIQDF 105
EAL+L + G K + +Y LI L F+ +LG Y
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 106 NIRCKETL----------------------FISLIQHYGKAHLVDKAIEVFNRMTSFDCV 143
N CK + + LI+ Y K++ V KA+ V N+M +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Query: 144 RTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRV 203
+ ++NSL+D + D A R+ + G P+ ++ MI K EEA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 204 FDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCF 263
FD + ++ V P VV Y +LI C+ G++ +A + E M+ K PN++T+ L+ GLC
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 264 KGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVT 323
G+ EA + M G +P + +L+ L K G + A S +M KPD T
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 324 YNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAML 383
Y I C+E R +A ++ +M+ G P+ TY ++ G+ + + VL M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 384 TSRHCPRLETFSCLLVGLL--KGGK----------------VDDACFVLEEMEKRKMRFD 425
+ P TF L+ LL K GK D +LE+M + + +
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 426 LKAWEGLVTDAC 437
K++E L+ C
Sbjct: 760 AKSYEKLILGIC 771
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 18/311 (5%)
Query: 56 DPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFI 115
D D A S F + G+K +Y + I R E ++ +++ + +
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
SLI+ YG + A +V RM C + +F SL+ L++ +
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE----------MKYGKQK 726
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G P L + + M+ E++ + ++M+E V P +Y LI +C G + A
Sbjct: 727 GSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 236 KGLFEDMIK-KGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS 294
+ +F+ M + +G P+ + + L+ C ++NEA K++ DM G PQL + VL+
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 295 DLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
L K+G+ E S+ + + Y D + + I+I+ + K+ Y++ M+ GCK
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 355 NAATYRMMVDG 365
++ TY ++++G
Sbjct: 900 SSQTYSLLIEG 910
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 170/415 (40%), Gaps = 59/415 (14%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D A L + G +Y S+I L +++ + + ++ + ++ +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I Y KA VD+A + +M S +C+ +FN+L+ L + ++ +A + + K+G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEML----------------------------- 208
+P + + ++I LK G+++ A F +ML
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 209 ------EREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLC 262
E V P + TY+SLI G+ A + + M G P+ T+ L+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI---- 714
Query: 263 FKGEYNEAKKMMFDMAY---RGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKP 319
K + +M Y +G +P+L +M + + LL +M + P
Sbjct: 715 ---------KHLLEMKYGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTP 758
Query: 320 DVVTYNILINYLCKEDRAAEAYKVLTEMQIG-GCKPNAATYRMMVDGFLRVEDFEGSLKV 378
+ +Y LI +C+ A KV MQ G P+ + ++ +++ + KV
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 379 LNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLV 433
++ M+ H P+LE+ L+ GL K G+ + V + + + D AW+ ++
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 173/368 (47%), Gaps = 7/368 (1%)
Query: 57 PDEALSLFHRHHQMGSKHSYP---SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETL 113
P A+S ++R + G+ P +Y LI RA D LG + R
Sbjct: 65 PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIA 124
Query: 114 FISLIQHYGKAHLVDKAIE-VFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK---RMF 169
F L++ A++ V RMT C+ + S+N LL L D +R +A M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184
Query: 170 DDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRT 229
D G P+++S+ +I G K+G+ ++A + EML+R + P VVTYNS+I LC+
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 230 GEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNF 289
M KA + M+K G P+ +TY ++ G C G+ EA + M G +P +V +
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 290 GVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQI 349
+LM L K G+ EA+ + M KR KP++ TY L+ + E + +L M
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 350 GGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDD 409
G P+ + +++ + + + ++ V + M P T+ ++ L K G+V+D
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 410 ACFVLEEM 417
A E+M
Sbjct: 425 AMLYFEQM 432
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 172/352 (48%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA +F + G K +Y +L+ A + +L + I +F LI
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
Y K VD+A+ VF++M ++ +++ IL + RV+DA F+ G
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
P I +N +I G +WE A + EML+R + + +NS+I C+ G + +++ L
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
FE M++ G PN +TY L+ G C G+ +EA K++ M G KP V + L++ K
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
++E+A L EM+ PD++TYNI++ L + R A A ++ + G + +T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
Y +++ G + + + +L++ + TF+ ++ LLK G+ D+A
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 176/374 (47%)
Query: 56 DPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFI 115
D D+A S +H G +Y S+I L +A+ D VL + + +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
S++ Y + +AI +M S + +++ L+D L N R +A+++FD K
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G +P + ++ +++G KG E + D M+ + P ++ LI + G++ +A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+F M ++G PNAVTY ++ LC G +A M G P + + L+
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
L K E A+ L+ EM R + + +N +I+ CKE R E+ K+ M G KPN
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
TY +++G+ + ++K+L+ M++ P T+S L+ G K +++DA + +
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 416 EMEKRKMRFDLKAW 429
EME + D+ +
Sbjct: 571 EMESSGVSPDIITY 584
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ ++I + K DKA ++ M + + ++NS++ L +D A + +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K G P+ +++N ++ G G+ +EA +M V P VVTY+ L+ +LC+ G
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
+A+ +F+ M K+G P TY L++G KG E ++ M G P F +L+
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
K+GK+++A + S+M+++ P+ VTY +I LCK R +A +M G
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
P Y ++ G +E + +++ ML C F+ ++ K G+V ++ +
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIG 439
E M + ++ ++ + L+ C+
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLA 524
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 1/349 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
++A+ F + G Y SLI+ L ++ E ++ + D I F S+
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + K V ++ ++F M + ++N+L++ ++D+A ++ +G
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+PN ++++ +I G K E+A +F EM V P ++TYN ++ L +T AK
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
L+ + + GT TY +++ GLC ++A +M ++ K + F +++ L
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K G+ +EAK L P+ TY ++ + + E ++ M+ GC ++
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
+V L+ + + L +M+ +H + + L + LL GGK
Sbjct: 723 MLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGK 770
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 41/281 (14%)
Query: 163 DDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLER---EVPPTVVTY 219
+DA+ +FD+ + G ++ N + + SR ++ M EV P + TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 220 NSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAY 279
LIG CR G + ++IKKG +A+ + L++GLC ++A D+
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA----MDIVL 146
Query: 280 RGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAE 339
R M++LG P+V +YNIL+ LC E+R+ E
Sbjct: 147 R-----------RMTELG-------------------CIPNVFSYNILLKGLCDENRSQE 176
Query: 340 AYKVLTEM---QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSC 396
A ++L M + GG P+ +Y +++GF + D + + + ML P + T++
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 397 LLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
++ L K +D A VL M K + D + ++ C
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N +I ++AL LF G +Y ++ L + R A + + I +
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ + + + ++ K L D A+++F + D ++FN ++D L+ R D+AK
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+F G PN ++ +M + + +G EE ++F M + N ++ L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNE 269
+ GE+ +A G + MI + + + A L L G+Y E
Sbjct: 732 LQRGEITRA-GTYLSMIDEKHFSLEASTASLFIDLLSGGKYQE 773
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDND-RVDDAKRMFDDA 172
F +LI YG++ L ++AI VFN M + L ++N+++D + FD+
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 173 DKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEM 232
+ G +P+ I+FN ++ + G WE A +FDEM R + V +YN+L+ +C+ G+M
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 233 GKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVL 292
A + M K PN V+Y+ +++G G ++EA + +M Y G V++ L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 293 MSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGC 352
+S K G+ EEA +L EM K DVVTYN L+ K+ + E KV TEM+
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 353 KPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACF 412
PN TY ++DG+ + ++ ++++ ++ + +S L+ L K G V A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 413 VLEEMEKRKMRFDLKAWEGLV 433
+++EM K + ++ + ++
Sbjct: 571 LIDEMTKEGISPNVVTYNSII 591
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 168/341 (49%), Gaps = 5/341 (1%)
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
+ IS + YGK V A +F + T+ +F++L+ + ++A +F+
Sbjct: 237 SAMISTLGRYGK---VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 172 ADKMGFRPNLISFNVMIKGRLKKG-EWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTG 230
+ G RPNL+++N +I K G E+++ ++ FDEM V P +T+NSL+ R G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 231 EMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFG 290
A+ LF++M + + +Y L++ +C G+ + A +++ M + P +V++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 291 VLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIG 350
++ K G+ +EA +L EM+ D V+YN L++ K R+ EA +L EM
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 351 GCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
G K + TY ++ G+ + ++ KV M P L T+S L+ G KGG +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 411 CFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRD 451
+ E + +R D+ + L+ DA +G G V + D
Sbjct: 534 MEIFREFKSAGLRADVVLYSALI-DALCKNGLVGSAVSLID 573
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 1/312 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARA-RDFDAVETVLGYIQDFNIRCKETLFIS 116
+EA+S+F+ + G + + +Y ++I + +F V +Q ++ F S
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
L+ + L + A +F+ MT+ + + S+N+LLD + ++D A +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
PN++S++ +I G K G ++EA +F EM + V+YN+L+ + G +A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
+ +M G + VTY L+ G +G+Y+E KK+ +M P L+ + L+
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
K G +EA + E K + DVV Y+ LI+ LCK A ++ EM G PN
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 357 ATYRMMVDGFLR 368
TY ++D F R
Sbjct: 585 VTYNSIIDAFGR 596
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 24/305 (7%)
Query: 69 QMGSKHSYP---SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAH 125
QM K P SY+++I A+A FD + G ++ I + +L+ Y K
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 126 LVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFN 185
++A+++ M S + + ++N+LL + D+ K++F + + PNL++++
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 186 VMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKK 245
+I G K G ++EA +F E + VV Y++LI LC+ G +G A L ++M K+
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 246 GTYPNAVTYALLMEGLCFKG------EYNEAKKMMFDMAYRGCKPQLVN------FGVLM 293
G PN VTY +++ +Y+ + F + + FG L
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLT 638
Query: 294 SDLGKRGK--IEEAKSLLS-------EMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
++ R EE LS +M + + KP+VVT++ ++N + + +A +L
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL 698
Query: 345 TEMQI 349
E+++
Sbjct: 699 EELRL 703
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 181/373 (48%)
Query: 46 PFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDF 105
VN + D AL L + + K +Y+++I L R DA ++ ++
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 106 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 165
I+ + SL++ KA + + M S + V + +FN LLD+ V ++ +A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 166 KRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGF 225
++ + G PN+I++N ++ G + EA+ + D M+ + P +VT+ SLI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 226 LCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
C + +F ++ K+G NAVTY++L++G C G+ A+++ +M G P
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
++ +G+L+ L GK+E+A + +++K + +V Y +I +CK + +A+ +
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
+ G KPN TY +M+ G + + +L M + P T++ L+ L+ G
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 406 KVDDACFVLEEME 418
+ + ++EEM+
Sbjct: 558 DLTASAKLIEEMK 570
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 205/416 (49%), Gaps = 4/416 (0%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
EA+ L R + G + +Y S++ + R+ D +L +++ N++ + ++I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
+ +D AI +F M + ++ ++NSL+ L + +D + D
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN+I+FNV++ +K+G+ +EA+ ++ EM+ R + P ++TYN+L+ C + +A +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
+ M++ P+ VT+ L++G C ++ K+ +++ RG V + +L+ +
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
GKI+ A+ L EM PDV+TY IL++ LC + +A ++ ++Q
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEME 418
Y +++G + E + + ++ P + T++ ++ GL K G + +A +L +ME
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 419 KRKMRFDLKAWEGLVTDACIGDGN---AGGLVEIRDMRDYSMAISSVMNVVDLLWT 471
+ + + L+ A + DG+ + L+E +S SS+ V+D+L +
Sbjct: 536 EDGNAPNDCTYNTLIR-AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 193/407 (47%), Gaps = 2/407 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D+A++LF + S ++ +AR + F+ V ++ I +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + + A V ++ +FN+L+ L +V +A + D + G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
+P+++++N ++ G + G+ A + +M ER V V TY+++I LCR G + A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
LF++M KG + VTY L+ GLC G++N+ ++ DM R P ++ F VL+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 298 KRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAA 357
K GK++EA L EM R P+++TYN L++ C ++R +EA +L M C P+
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 358 TYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEM 417
T+ ++ G+ V+ + +KV + T+S L+ G + GK+ A + +EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 418 EKRKMRFDLKAWEGLVTDACIGDGNAGGLVEI-RDMRDYSMAISSVM 463
+ D+ + G++ D +G +EI D++ M + VM
Sbjct: 430 VSHGVLPDVMTY-GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 175/369 (47%)
Query: 71 GSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKA 130
G H+ + +I R +VLG + T F +LI+ V +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 131 IEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKG 190
+ + +RM C + ++NS+++ + + A + ++ + ++ +++ +I
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 191 RLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPN 250
+ G + A +F EM + + +VVTYNSL+ LC+ G+ L +DM+ + PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 251 AVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLS 310
+T+ +L++ +G+ EA ++ +M RG P ++ + LM + ++ EA ++L
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 311 EMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVE 370
M + + PD+VT+ LI C R + KV + G NA TY ++V GF +
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 371 DFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWE 430
+ + ++ M++ P + T+ LL GL GK++ A + E+++K KM + +
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 431 GLVTDACIG 439
++ C G
Sbjct: 478 TIIEGMCKG 486
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 35/348 (10%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARA----------RDFDAVETVL-------- 99
D A+SLF G K S +Y SL+ L +A +D + E V
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 100 -------GYIQDFNIRCKETL----------FISLIQHYGKAHLVDKAIEVFNRMTSFDC 142
G +Q+ N KE + + +L+ Y + + +A + + M C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 143 VRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASR 202
+ +F SL+ RVDD ++F + K G N ++++++++G + G+ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 203 VFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLC 262
+F EM+ V P V+TY L+ LC G++ KA +FED+ K V Y ++EG+C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 263 FKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVV 322
G+ +A + + +G KP ++ + V++S L K+G + EA LL +M++ P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 323 TYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVE 370
TYN LI ++ + K++ EM+ G +A++ +M++D L E
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGE 592
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 69/154 (44%)
Query: 301 KIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYR 360
K ++A +L EM + + P +V ++ + + + + ++++ G N T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 361 MMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKR 420
+M++ F R + VL ++ + P TF+ L+ GL GKV +A +++ M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 421 KMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRD 454
+ D+ + +V C + L +R M +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 199/460 (43%), Gaps = 71/460 (15%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
D+A+ LF Q S ++ L+ +A+ FD V + ++ I + L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
I + + + A+ + +M + + NSLL+ +R+ DA + D +MG+
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE------ 231
+P+ ++F +I G + EA + D M++R P +VTY +++ LC+ G+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 232 ----MGKAK-------------------------GLFEDMIKKGTYPNAVTYALLMEGLC 262
M AK LF +M KG PN +TY+ L+ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 263 FKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVV 322
G +++A +++ DM R P LV F L+ K+GK+ +A+ L EM KR P++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 323 TYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAM 382
TY+ LIN C DR EA ++L M C PN TY +++GF + + + +++ M
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 383 -------------------LTSRHC----------------PRLETFSCLLVGLLKGGKV 407
+R C P + T++ LL GL K GK+
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 408 DDACFVLEEMEKRKMRFDLKAWEGLVTDAC-IGDGNAGGL 446
A V E +++ M D+ + ++ C G GG+
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 167/330 (50%), Gaps = 2/330 (0%)
Query: 127 VDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNV 186
+D AI +F M ++ F+ LL + ++ D + + +G NL ++N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+I + A + +M++ P +VT NSL+ C + A L + M++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
P+ VT+ L+ GL + +EA ++ M RGC+P LV +G +++ L KRG + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+LL++M+ + + +VV Y+ +I+ LCK +A + TEM+ G +PN TY ++
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + ++L+ M+ + P L TFS L+ +K GK+ A + EEM KR + ++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 427 KAWEGLVTDACIGD--GNAGGLVEIRDMRD 454
+ L+ C+ D G A ++E+ +D
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
++ L + R D+AL+LF G + + +Y+SLI L + +L + + I
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
F +LI + K + KA +++ M + +++SL++ DR+ +AK+
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
M + + PN++++N +I G K ++ +F EM +R + VTY +LI
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ + A+ +F+ M+ G +PN +TY +L++GLC
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC------------------------- 474
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
K GK+ +A + +++ +PD+ TYNI+I +CK +
Sbjct: 475 ----------KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%)
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+++ L E ++A +F M + P+++ ++ L+ + + + E M G
Sbjct: 49 VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG 108
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
N TY +L+ C + A ++ M G +P +V L++ +I +A
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
+L+ +M + YKPD VT+ LI+ L ++A+EA ++ M GC+P+ TY +V+G
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ D + +L +LN M ++ + +S ++ L K DDA + EME + +R ++
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 427 KAWEGLVTDAC 437
+ L++ C
Sbjct: 289 ITYSSLISCLC 299
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 155/304 (50%)
Query: 149 FNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEML 208
+ S++ +L ++ +A+ F + + G P+ + + +I G K+G+ AS+ F EM
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 209 EREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYN 268
R++ P V+TY ++I C+ G+M +A LF +M KG P++VT+ L+ G C G
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 269 EAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILI 328
+A ++ M GC P +V + L+ L K G ++ A LL EM K +P++ TYN ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 329 NYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC 388
N LCK EA K++ E + G + TY ++D + + + + + ++L ML
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 389 PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVE 448
P + TF+ L+ G G ++D +L M + + + + LV CI +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 449 IRDM 452
+DM
Sbjct: 619 YKDM 622
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 156/308 (50%)
Query: 130 AIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIK 189
AI VF + S+N ++ + R+ +A + + G+ P++IS++ ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 190 GRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYP 249
G + GE ++ ++ + M + + P Y S+IG LCR ++ +A+ F +MI++G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 250 NAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLL 309
+ V Y L++G C +G+ A K ++M R P ++ + ++S + G + EA L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 310 SEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRV 369
EM + +PD VT+ LIN CK +A++V M GC PN TY ++DG +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 370 EDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAW 429
D + + ++L+ M P + T++ ++ GL K G +++A ++ E E + D +
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 430 EGLVTDAC 437
L+ C
Sbjct: 530 TTLMDAYC 537
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 189/416 (45%), Gaps = 3/416 (0%)
Query: 45 IPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQD 104
I FV L I++ L L G SY++++ R + D V ++ ++
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELK---GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 105 FNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDD 164
++ ++ S+I + + +A E F+ M + + +L+D +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 165 AKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIG 224
A + F + P+++++ +I G + G+ EA ++F EM + + P VT+ LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 225 FLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKP 284
C+ G M A + MI+ G PN VTY L++GLC +G+ + A +++ +M G +P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 285 QLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVL 344
+ + +++ L K G IEEA L+ E + D VTY L++ CK +A ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 345 TEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKG 404
EM G +P T+ ++++GF E K+LN ML P TF+ L+
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 405 GKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAIS 460
+ A + ++M R + D K +E LV C ++M+ ++S
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 174/386 (45%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
VN + D+ L + G K + Y S+I L R E + I
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
++ +LI + K + A + F M S D + ++ +++ + +A +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
+F + G P+ ++F +I G K G ++A RV + M++ P VVTY +LI LC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ G++ A L +M K G PN TY ++ GLC G EA K++ + G V
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ LM K G++++A+ +L EM + +P +VT+N+L+N C + K+L M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 348 QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKV 407
G PNA T+ +V + + + + + M + P +T+ L+ G K +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 408 DDACFVLEEMEKRKMRFDLKAWEGLV 433
+A F+ +EM+ + + + L+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F LI Y KA + A V N M C + ++ +L+D L +D A + +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+G +PN+ ++N ++ G K G EEA ++ E + VTY +L+ C++GEM
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
KA+ + ++M+ KG P VT+ +LM G C G + +K++ M +G P F L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
R ++ A ++ +M R PD TY L+ CK EA+ + EM+ G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAM 382
+ +TY +++ GFL+ + F + +V + M
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 163/347 (46%)
Query: 79 YASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMT 138
Y +LI + D A + +I + ++I + + + +A ++F+ M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 139 SFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWE 198
+F L++ + DA R+ + + G PN++++ +I G K+G+ +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 199 EASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLM 258
A+ + EM + + P + TYNS++ LC++G + +A L + G + VTY LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 259 EGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYK 318
+ C GE ++A++++ +M +G +P +V F VLM+ G +E+ + LL+ M +
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 319 PDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKV 378
P+ T+N L+ C + A + +M G P+ TY +V G + + + + +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 379 LNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFD 425
M + T+S L+ G LK K +A V ++M + + D
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 169/382 (44%), Gaps = 49/382 (12%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRM--TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
IS K ++ D ++ F+ + T D + F+ +LVD + +A+R+F+
Sbjct: 141 LISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEK 200
Query: 172 ADKMG----------------------------FRP--------NLISFNVMIKGRLKKG 195
G FR N+ S+N++I + G
Sbjct: 201 MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 196 EWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYA 255
+EA + M + P V++Y++++ CR GE+ K L E M +KG PN+ Y
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 256 LLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKR 315
++ LC + EA++ +M +G P V + L+ KRG I A EM R
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 316 QYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGS 375
PDV+TY +I+ C+ EA K+ EM G +P++ T+ +++G+ + + +
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 376 LKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTD 435
+V N M+ + P + T++ L+ GL K G +D A +L EM K ++ ++ + +V
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 436 AC-----------IGDGNAGGL 446
C +G+ A GL
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGL 522
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Query: 65 HRHH-QMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGK 123
H H Q G + +Y +LI L + D D+ +L + ++ + S++ K
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 124 AHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLIS 183
+ +++A+++ + ++ +L+D + +D A+ + + G +P +++
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 184 FNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMI 243
FNV++ G G E+ ++ + ML + + P T+NSL+ C + A +++DM
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 244 KKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIE 303
+G P+ TY L++G C EA + +M +G + + VL+ KR K
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 304 EAKSLLSEMKKRQYKPD 320
EA+ + +M++ D
Sbjct: 684 EAREVFDQMRREGLAAD 700
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 130/282 (46%), Gaps = 20/282 (7%)
Query: 56 DPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFI 115
D D A L H ++G + + +Y S++ L ++ + + ++G + + +
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
+L+ Y K+ +DKA E+ M T+ +FN L++ + ++D +++ +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
G PN +FN ++K + + A+ ++ +M R V P TY +L+ C+ M +A
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
LF++M KG + TY++L++G + ++ EA+++ M G L +D
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG----------LAAD 700
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVT---YNILINYLCKE 334
+E S+ K + +PD + I+ NYL E
Sbjct: 701 -------KEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDE 735
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 1/321 (0%)
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
L+ K L D ++F +M V + +N L+ + + A+++ + ++ G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
P++ ++N +I KK EA V D M V P +VTYNS I R G M +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
LF + IK N VTY L++G C + +EA ++ M RG P +V + ++ L
Sbjct: 294 RLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
+ G+I EA LL+EM ++ +PD +T N LIN CK + A KV +M G K +
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 357 ATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEE 416
+Y+ ++ GF +V + E + + L +M+ P T+S L+ G K D+ +LEE
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 417 MEKRKMRFDLKAWEGLVTDAC 437
EKR + D+ + GL+ C
Sbjct: 473 FEKRGLCADVALYRGLIRRIC 493
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 181/397 (45%), Gaps = 2/397 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N L + R D +F + ++G + Y L++ +++ D + E +L +++
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ + +LI Y K + +A+ V +RM + ++NS + R+ +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
R+F + K N +++ +I G + + +EA R+ + M R P VVTYNS++ L
Sbjct: 294 RLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C G + +A L +M K P+ +T L+ C + A K+ M G K +
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
++ L+ K ++E AK L M ++ + P TY+ L++ +++ E K+L E
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
+ G + A YR ++ ++E + + + +M F+ + + GK
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 407 VDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNA 443
V +A + + M R++ +LK ++ ++ + GD +
Sbjct: 533 VTEASALFDVMYNRRLMVNLKLYKS-ISASYAGDNDV 568
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 52/303 (17%)
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIG------------------FLCR 228
MI K ++ A ++ D++ +RE+ + + SL+G + +
Sbjct: 86 MILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAK 145
Query: 229 TGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVN 288
G + + +FE + G P+ +L+ L + + K+ M G +
Sbjct: 146 AGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHV 205
Query: 289 FGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQ 348
+ VL+ K G E+A+ LLSEM+++ PD+ TYN LI+ CK+ EA V M+
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 349 IGGCKPNAATY-----------RM-----------------------MVDGFLRVEDFEG 374
G PN TY RM ++DG+ R+ D +
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 375 SLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVT 434
+L++ M + P + T++ +L L + G++ +A +L EM +K+ D L+
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 435 DAC 437
C
Sbjct: 386 AYC 388
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 180/360 (50%)
Query: 78 SYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRM 137
S+ LI A + + +L + +F ++ +LI K ++KA ++F M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 138 TSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEW 197
V +++ L++ L N M++ + G PNL ++N ++ K G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 198 EEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALL 257
++A +VFDEM ER V +VTYN+LIG LCR ++ +A + + M G PN +TY L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 258 MEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQY 317
++G C G+ +A + D+ RG P LV + +L+S ++G A ++ EM++R
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 318 KPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLK 377
KP VTY ILI+ + D +A ++ M+ G P+ TY +++ GF + +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 378 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ +M+ P ++ +++G K G A +L+EME++++ ++ ++ ++ C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 181/365 (49%)
Query: 53 EIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKET 112
E + +++ L + G + Y +LI + + + + + + + E
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 113 LFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDA 172
+ LI K + + E++ +M L ++N +++ L + R DA ++FD+
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 173 DKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEM 232
+ G N++++N +I G ++ + EA++V D+M + P ++TYN+LI C G++
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 233 GKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVL 292
GKA L D+ +G P+ VTY +L+ G C KG+ + A KM+ +M RG KP V + +L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 293 MSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGC 352
+ + +E+A L M++ PDV TY++LI+ C + + EA ++ M C
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 353 KPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACF 412
+PN Y M+ G+ + +LK+L M P + ++ ++ L K K +A
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 413 VLEEM 417
++E+M
Sbjct: 535 LVEKM 539
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 179/342 (52%)
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
LI+ +A ++K+ ++ +T F + + +L+D ++ AK +F + K+G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
N ++ V+I G K G ++ ++++M E V P + TYN ++ LC+ G A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
+F++M ++G N VTY L+ GLC + + NEA K++ M G P L+ + L+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
GK+ +A SL ++K R P +VTYNIL++ C++ + A K++ EM+ G KP+
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 357 ATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEE 416
TY +++D F R ++ E ++++ +M P + T+S L+ G G++++A + +
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 417 MEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMA 458
M ++ + + ++ C + L +++M + +A
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 161/316 (50%), Gaps = 1/316 (0%)
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
+ K L+ +I Y ++ ++ +I FN M V FN LL +V + +
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLC 227
F++ +K ++ SF ++IKG + GE E++ + E+ E P VV Y +LI C
Sbjct: 151 FFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 228 RTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLV 287
+ GE+ KAK LF +M K G N TY +L+ GL G + +M M G P L
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 288 NFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEM 347
+ +M+ L K G+ ++A + EM++R ++VTYN LI LC+E + EA KV+ +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 348 QIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKV 407
+ G PN TY ++DGF V +L + + + P L T++ L+ G + G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 408 DDACFVLEEMEKRKMR 423
A +++EME+R ++
Sbjct: 390 SGAAKMVKEMEERGIK 405
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 156/303 (51%), Gaps = 5/303 (1%)
Query: 64 FHRHHQMGSKHSYP---SYASLIYKLAR-ARDFDAVETVLGYIQDFNIRCKETLFISLIQ 119
F + +M +P +Y ++ +L + R DA + V +++ + C + +LI
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ-VFDEMRERGVSCNIVTYNTLIG 311
Query: 120 HYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRP 179
+ +++A +V ++M S L ++N+L+D ++ A + D G P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 180 NLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLF 239
+L+++N+++ G +KG+ A+++ EM ER + P+ VTY LI R+ M KA L
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 240 EDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKR 299
M + G P+ TY++L+ G C KG+ NEA ++ M + C+P V + ++ K
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 300 GKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATY 359
G A LL EM++++ P+V +Y +I LCKE ++ EA +++ +M G P+ +
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Query: 360 RMM 362
++
Sbjct: 552 SLI 554
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 150/314 (47%), Gaps = 1/314 (0%)
Query: 149 FNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEML 208
+ +++ V + ++ + F++ GF P FN ++ + + + F+E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 209 EREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYN 268
+ +V V ++ LI C GE+ K+ L ++ + G PN V Y L++G C KGE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 269 EAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILI 328
+AK + F+M G + VL++ L K G ++ + +M++ P++ TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 329 NYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHC 388
N LCK+ R +A++V EM+ G N TY ++ G R + KV++ M +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 389 PRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVE 448
P L T++ L+ G GK+ A + +++ R + L + LV+ C +G
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 449 IRDMRDYSMAISSV 462
+++M + + S V
Sbjct: 396 VKEMEERGIKPSKV 409
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
+ALSL G S +Y L+ R D ++ +++ I+ + + LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
+ ++ ++KAI++ M V + +++ L+ ++++A R+F +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
PN + +N MI G K+G A ++ EM E+E+ P V +Y +I LC+ + +A+ L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 239 FEDMIKKGTYPNAVTYALL 257
E MI G P+ +L+
Sbjct: 536 VEKMIDSGIDPSTSILSLI 554
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 168/322 (52%), Gaps = 16/322 (4%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ ++ + KA L+++A + FN M C + ++ +L+ + +V A +F+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEML-EREVP---------------PTVV 217
G PN+++++ +I G K G+ E+A ++F+ M ++VP P VV
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 218 TYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDM 277
TY +L+ C++ + +A+ L + M +G PN + Y L++GLC G+ +EA+++ +M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 278 AYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRA 337
+ G L + L+ K + + A +LS+M + P+VV Y +I+ LCK +
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 338 AEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCL 397
EAYK++ M+ GC+PN TY M+DGF + E L++L M + P T+ L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 398 LVGLLKGGKVDDACFVLEEMEK 419
+ K G +D A +LEEM++
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQ 842
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 180/376 (47%), Gaps = 18/376 (4%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
++A F+ ++G + +Y +LI+ +A+ + + + +L
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQ----------------SFNSLLDILVDNDR 161
I + KA V+KA ++F RM V + ++ +LLD + R
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 162 VDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNS 221
V++A+++ D G PN I ++ +I G K G+ +EA V EM E P T+ TY+S
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 222 LIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRG 281
LI + A + M++ PN V Y +++GLC G+ +EA K+M M +G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 282 CKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAY 341
C+P +V + ++ G GKIE LL M + P+ VTY +LI++ CK A+
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 342 KVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGL 401
+L EM+ + A YR +++GF + +F SL +L+ + P L + L+ L
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 402 LKGGKVDDACFVLEEM 417
+K +++ A +LEE+
Sbjct: 893 IKAQRLEMALRLLEEV 908
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 16/372 (4%)
Query: 56 DPDEALSLFHRHHQMGS----KHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKE 111
D ++ SL HR + + + +A + K+ + R+ L ++ N
Sbjct: 249 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWRE------ALTLVETENFVPDT 302
Query: 112 TLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDD 171
+ LI +A L ++A++ NRM + C+ + ++++LL ++ ++ KR+ +
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 172 ADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGE 231
G P+ FN ++ G+ A ++ +M++ P V YN LIG +C +
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 232 ------MGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 285
+ A+ + +M+ G N + + LC G+Y +A ++ +M +G P
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 286 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 345
+ +++ L K+E A L EMK+ DV TY I+++ CK +A K
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 346 EMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 405
EM+ GC PN TY ++ +L+ + + ++ ML+ P + T+S L+ G K G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 406 KVDDACFVLEEM 417
+V+ AC + E M
Sbjct: 603 QVEKACQIFERM 614
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 193/482 (40%), Gaps = 77/482 (15%)
Query: 33 QNHKTIRKTKEPIP---FVNDLKEIRDPDEALSLF-HRHHQMGSKHSYPSYASLIYKLAR 88
++ K +R+ +E + + L+ I P +S F Q+G KH+ P Y +L+ + R
Sbjct: 118 KSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVR 177
Query: 89 ARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQS 148
D E L I+D + L++ + + A+E R+ F + +
Sbjct: 178 DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRST 237
Query: 149 FNSLLDILVDNDRVDDAKRMFDDAD-------------------KMG------------- 176
+N L+ + DR+D A + + K+G
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETEN 297
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
F P+ + + +I G + +EEA + M P VVTY++L+ ++G+ K
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMS-- 294
+ M+ +G YP+ + L+ C G+++ A K++ M G P V + +L+
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 295 ------------DLGKR---------------------------GKIEEAKSLLSEMKKR 315
DL ++ GK E+A S++ EM +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 316 QYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGS 375
+ PD TY+ ++NYLC + A+ + EM+ GG + TY +MVD F + E +
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 376 LKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTD 435
K N M P + T++ L+ LK KV A + E M ++ + L+
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 436 AC 437
C
Sbjct: 598 HC 599
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 156/354 (44%), Gaps = 4/354 (1%)
Query: 64 FHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGK 123
F ++ + + +Y +L+ ++ + +L + + ++ +LI K
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 124 AHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLIS 183
+D+A EV M+ TL +++SL+D R D A ++ + PN++
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 184 FNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMI 243
+ MI G K G+ +EA ++ M E+ P VVTY ++I G++ L E M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 244 KKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIE 303
KG PN VTY +L++ C G + A ++ +M + ++ K +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFI 864
Query: 304 EAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK--PNAATYRM 361
E+ LL E+ + P + Y +LI+ L K R A ++L E+ ++TY
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 362 MVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
+++ E + ++ + M P +++F L+ GL + K+ +A +L+
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 98/239 (41%), Gaps = 8/239 (3%)
Query: 48 VNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNI 107
++ L ++ DEA L + G + + +Y ++I + +L + +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 108 RCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKR 167
+ LI H K +D A + M + +++ N ++
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLG 868
Query: 168 MFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVV----TYNSLI 223
+ D+ + P L + ++I +K E A R+ +E+ T+V TYNSLI
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLI 926
Query: 224 GFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGC 282
LC ++ A LF +M KKG P ++ L++GL + +EA ++ +++ C
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 182/389 (46%), Gaps = 10/389 (2%)
Query: 44 PIP-------FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVE 96
P+P +N + +++ D ++L MG H + L+ ++
Sbjct: 68 PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLAS 127
Query: 97 TVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDIL 156
+ LG + F SLI + + +++A+ + N+M + + +++D L
Sbjct: 128 SFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
Query: 157 VDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTV 216
N V+ A +FD + G RP+++ + ++ G G W +A + M +R++ P V
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 217 VTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFD 276
+T+N+LI + G+ A+ L+ +MI+ PN TY L+ G C +G +EA++M +
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 277 MAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDR 336
M +GC P +V + L++ K K+++A + EM ++ + +TY LI + +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 337 AAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRH---CPRLET 393
A +V + M G PN TY +++ + +L + M P + T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 394 FSCLLVGLLKGGKVDDACFVLEEMEKRKM 422
++ LL GL GK++ A V E+M KR+M
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 16/387 (4%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
F L+ K D I + + + L + N L++ + + A
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
K+GF P++++F +I G EEA + ++M+E + P VV Y ++I LC+ G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 234 KAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLM 293
A LF+ M G P+ V Y L+ GLC G + +A ++ M R KP ++ F L+
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 294 SDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCK 353
K GK +A+ L +EM + P++ TY LIN C E EA ++ M+ GC
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
P+ Y +++GF + + + ++K+ M T++ L+ G + GK + A V
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 414 LEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSVMNVVDLLWTY- 472
M R + +++ + L+ C L+ DM+ M V +WTY
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-----GVAPNIWTYN 429
Query: 473 -LGMGTC---------VVIDLFQKREM 489
L G C +V + +KREM
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREM 456
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 192/391 (49%), Gaps = 3/391 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N + P A S + ++G + ++ SLI + +++ + +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
I+ ++ ++I K V+ A+ +F++M ++ + + SL++ L ++ R DA
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+ K +P++I+FN +I +K+G++ +A +++EM+ + P + TY SLI
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C G + +A+ +F M KG +P+ V Y L+ G C + ++A K+ ++M+ +G
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
+ + L+ G+ GK A+ + S M R P++ TYN+L++ LC + +A + +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 347 MQ---IGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLK 403
MQ + G PN TY +++ G E +L V M + T++ ++ G+ K
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 404 GGKVDDACFVLEEMEKRKMRFDLKAWEGLVT 434
GKV +A + + + ++ ++ + +++
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 182/365 (49%), Gaps = 3/365 (0%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
+EA+S+ ++ +MG K Y ++I L + + ++ ++++ IR ++ SL
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGF 177
+ + A + MT + +FN+L+D V + DA+ ++++ +M
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 178 RPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKG 237
PN+ ++ +I G +G +EA ++F M + P VV Y SLI C+ ++ A
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 238 LFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLG 297
+F +M +KG N +TY L++G G+ N A+++ M RG P + + VL+ L
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 298 KRGKIEEAKSLLSEMKKRQ---YKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKP 354
GK+++A + +M+KR+ P++ TYN+L++ LC + +A V +M+
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 355 NAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVL 414
TY +++ G + + ++ + ++ + P + T++ ++ GL + G +A +
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 415 EEMEK 419
+M++
Sbjct: 519 RKMKE 523
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%)
Query: 128 DKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVM 187
++A+++F M + ++ F LL+++ + D + D MG +L + N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 188 IKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGT 247
+ + + AS +M++ P +VT+ SLI C M +A + M++ G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 248 YPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKS 307
P+ V Y +++ LC G N A + M G +P +V + L++ L G+ +A S
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 308 LLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFL 367
LL M KR+ KPDV+T+N LI+ KE + +A ++ EM PN TY +++GF
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 368 RVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLK 427
+ + ++ M T P + ++ L+ G K KVDDA + EM ++ + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 428 AWEGLV 433
+ L+
Sbjct: 354 TYTTLI 359
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 131/241 (54%), Gaps = 3/241 (1%)
Query: 114 FISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDAD 173
+ SLI + VD+A ++F M + C + ++ SL++ +VDDA ++F +
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 174 KMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
+ G N I++ +I+G + G+ A VF M+ R VPP + TYN L+ LC G++
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 234 KAKGLFEDMIKK---GTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFG 290
KA +FEDM K+ G PN TY +L+ GLC+ G+ +A + DM R ++ +
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 291 VLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIG 350
+++ + K GK++ A +L + + KP+VVTY +I+ L +E EA+ + +M+
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Query: 351 G 351
G
Sbjct: 525 G 525
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%)
Query: 143 VRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASR 202
VR ++ +L + + + ++A +F + P++I F ++ K +++
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 203 VFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLC 262
+ D + V + T N L+ C++ + A M+K G P+ VT+ L+ G C
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 263 FKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVV 322
EA M+ M G KP +V + ++ L K G + A SL +M+ +PDVV
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 323 TYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAM 382
Y L+N LC R +A +L M KP+ T+ ++D F++ F + ++ N M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 383 LTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 437
+ P + T++ L+ G G VD+A + ME + D+ A+ L+ C
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%)
Query: 187 MIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKG 246
+++ L ++ EA +F M+E P+++ + L+ + + + L + + G
Sbjct: 43 ILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 247 TYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAK 306
+ T LLM C + A + M G +P +V F L++ ++EEA
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 307 SLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGF 366
S++++M + KPDVV Y +I+ LCK A + +M+ G +P+ Y +V+G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 367 LRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 426
+ + +L M + P + TF+ L+ +K GK DA + EM + + ++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 427 KAWEGLVTDACI 438
+ L+ C+
Sbjct: 283 FTYTSLINGFCM 294
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 150/304 (49%), Gaps = 35/304 (11%)
Query: 149 FNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEML 208
FN L++ + DA+++FD+ K +P ++SFN +I G K G +E R+ +M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 209 EREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYN 268
+ P V TY++LI LC+ +M A GLF++M K+G PN V + L+ G GE +
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 269 EAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILI 328
K+ M +G +P +V + L++ K G + A++++ M +R +PD +TY LI
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 329 NY-----------------------------------LCKEDRAAEAYKVLTEMQIGGCK 353
+ +CKE R +A + L EM G K
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 354 PNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFV 413
P+ TY MM+D F + D + K+L M + H P + T++ LL GL K G++ +A +
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 414 LEEM 417
L+ M
Sbjct: 543 LDAM 546
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 166/319 (52%)
Query: 82 LIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFD 141
L+ K + + + V I +++ F +LI Y K +D+ + ++M
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 142 CVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEAS 201
+ ++++L++ L +++D A +FD+ K G PN + F +I G + GE +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 202 RVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGL 261
+ +ML + + P +V YN+L+ C+ G++ A+ + + MI++G P+ +TY L++G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 262 CFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDV 321
C G+ A ++ +M G + V F L+ + K G++ +A+ L EM + KPD
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 322 VTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNA 381
VTY ++++ CK+ A +K+L EMQ G P+ TY ++++G ++ + + +L+A
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 382 MLTSRHCPRLETFSCLLVG 400
ML P T++ LL G
Sbjct: 546 MLNIGVVPDDITYNTLLEG 564
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 153/318 (48%), Gaps = 3/318 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N ++ + DE L H+ + ++ +Y++LI L + D + +
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ + +F +LI + + +D E + +M S + +N+L++ N + A+
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
+ D + G RP+ I++ +I G + G+ E A + EM + + V +++L+ +
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
C+ G + A+ +M++ G P+ VTY ++M+ C KG+ K++ +M G P +
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
V + VL++ L K G+++ A LL M PD +TYN L+ + +++ Y E
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPE 580
Query: 347 MQIGGCKPNAATYRMMVD 364
+ G + A+Y+ +V+
Sbjct: 581 I---GIVADLASYKSIVN 595
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 1/234 (0%)
Query: 221 SLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYR 280
+L+ + + G G + +++ G N + +LM C +G ++A+K+ ++ R
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 281 GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEA 340
+P +V+F L++ K G ++E L +M+K + +PDV TY+ LIN LCKE++ A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 341 YKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVG 400
+ + EM G PN + ++ G R + + + ML+ P + ++ L+ G
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 401 LLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRD 454
K G + A +++ M +R +R D + L+ C G G+ +EIR D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG-GDVETALEIRKEMD 442
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 181/352 (51%), Gaps = 20/352 (5%)
Query: 59 EALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISLI 118
+ L +FHR + G+ Y L+ + R GY D I C + LI
Sbjct: 91 QMLKIFHRSCRSGN---YIESLHLLETMVRK----------GYNPDV-ILCTK-----LI 131
Query: 119 QHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFR 178
+ + + KA+ V + F ++N+L++ +R+DDA R+ D F
Sbjct: 132 KGFFTLRNIPKAVRVMEILEKFGQPDVF-AYNALINGFCKMNRIDDATRVLDRMRSKDFS 190
Query: 179 PNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGL 238
P+ +++N+MI +G+ + A +V +++L PTV+TY LI G + +A L
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 239 FEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGK 298
++M+ +G P+ TY ++ G+C +G + A +M+ ++ +GC+P ++++ +L+ L
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 299 RGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAAT 358
+GK EE + L+++M + P+VVTY+ILI LC++ + EA +L M+ G P+A +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 359 YRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDA 410
Y ++ F R + +++ L M++ P + ++ +L L K GK D A
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 194/416 (46%), Gaps = 4/416 (0%)
Query: 47 FVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFN 106
+N ++ D+A + R +Y +I L D VL + N
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 107 IRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAK 166
+ + LI+ VD+A+++ + M S + ++N+++ + VD A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 167 RMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFL 226
M + + G P++IS+N++++ L +G+WEE ++ +M + P VVTY+ LI L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 227 CRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQL 286
CR G++ +A L + M +KG P+A +Y L+ C +G + A + + M GC P +
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 287 VNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTE 346
VN+ +++ L K GK ++A + ++ + P+ +YN + + L A ++ E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 347 MQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGK 406
M G P+ TY M+ R + + ++L M + P + T++ +L+G K +
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 407 VDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRDYSMAISSV 462
++DA VLE M R + + L+ G G AG E ++ + + I ++
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIE----GIGFAGYRAEAMELANDLVRIDAI 575
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 163/322 (50%)
Query: 116 SLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKM 175
+LI + K + +D A V +RM S D ++N ++ L ++D A ++ +
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 176 GFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKA 235
+P +I++ ++I+ + +G +EA ++ DEML R + P + TYN++I +C+ G + +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 236 KGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSD 295
+ ++ KG P+ ++Y +L+ L +G++ E +K+M M C P +V + +L++
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 296 LGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPN 355
L + GKIEEA +LL MK++ PD +Y+ LI C+E R A + L M GC P+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 356 AATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLE 415
Y ++ + + +L++ + P +++ + L G A ++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 416 EMEKRKMRFDLKAWEGLVTDAC 437
EM + D + +++ C
Sbjct: 463 EMMSNGIDPDEITYNSMISCLC 484
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 153/308 (49%), Gaps = 9/308 (2%)
Query: 142 CVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMGFRPNLISFNVMIKGRLKKGEWEEAS 201
C + ++ F +L +I A R+ + +K G +P++ ++N +I G K ++A+
Sbjct: 127 CTKLIKGFFTLRNI-------PKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDAT 178
Query: 202 RVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAKGLFEDMIKKGTYPNAVTYALLMEGL 261
RV D M ++ P VTYN +IG LC G++ A + ++ P +TY +L+E
Sbjct: 179 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 262 CFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDV 321
+G +EA K+M +M RG KP + + ++ + K G ++ A ++ ++ + +PDV
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 322 VTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNA 381
++YNIL+ L + + E K++T+M C PN TY +++ R E ++ +L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 382 MLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDG 441
M P ++ L+ + G++D A LE M D+ + ++ C +G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC-KNG 417
Query: 442 NAGGLVEI 449
A +EI
Sbjct: 418 KADQALEI 425
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 181/377 (48%), Gaps = 11/377 (2%)
Query: 59 EALSLFH--RHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFIS 116
+AL FH +H H S+ I AR V +++ ++ I F
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
+ + Y A DKA+++F M C + L SFN++LD+L + RV+ A +F A +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGR 190
Query: 177 FRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMGKAK 236
F + +++NV++ G +A V EM+ER + P + TYN+++ R G++ A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 237 GLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDL 296
F +M K+ + VTY ++ G GE A+ + +M G P + + ++ L
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 297 GKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLTEMQIGGCKPNA 356
K+ +E A + EM +R Y+P+V TYN+LI L + +++ M+ GC+PN
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 357 ATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDAC----F 412
TY MM+ + + E +L + M + P L+T++ L+ G+ + +D
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKL 430
Query: 413 VLEEMEK----RKMRFD 425
+LE +E+ RK F+
Sbjct: 431 LLEMVERGFIPRKFTFN 447
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 284 PQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKV 343
P F ++ GK ++A L M + D+ ++N +++ LCK R +AY++
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 344 LTEMQIGGCKPNAATYRMMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLK 403
++ G + TY ++++G+ ++ +L+VL M+ P L T++ +L G +
Sbjct: 184 FRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 404 GGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGDGNAGGLVEIRDMRD 454
G++ A EM+KR D+ + +V G G AG + R++ D
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH----GFGVAGEIKRARNVFD 289
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 9/194 (4%)
Query: 60 ALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKE---TLFIS 116
A ++F + G S +Y ++I L + D VE + ++ R E T +
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKK---DNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 117 LIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDAKRMFDDADKMG 176
LI+ A + E+ RM + C Q++N ++ + V+ A +F+
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 177 FRPNLISFNVMIKGRLKKGEWEE---ASRVFDEMLEREVPPTVVTYNSLIGFLCRTGEMG 233
PNL ++N++I G + E+ A ++ EM+ER P T+N ++ L TG
Sbjct: 401 CLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQA 460
Query: 234 KAKGLFEDMIKKGT 247
AK + K G+
Sbjct: 461 FAKEILRLQSKSGS 474
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 58 DEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDFNIRCKETLFISL 117
+ A+ +F + G + + +Y LI L A +F E ++ +++ + +
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 118 IQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDD---AKRMFDDADK 174
I++Y + V+KA+ +F +M S DC+ L ++N L+ + R +D A ++ + +
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVE 436
Query: 175 MGFRPNLISFNVMIKGRLKKGEWEEASRVF 204
GF P +FN ++ G L G A +
Sbjct: 437 RGFIPRKFTFNRVLNGLLLTGNQAFAKEIL 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,104,666
Number of Sequences: 539616
Number of extensions: 7618374
Number of successful extensions: 28155
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 20462
Number of HSP's gapped (non-prelim): 2871
length of query: 491
length of database: 191,569,459
effective HSP length: 122
effective length of query: 369
effective length of database: 125,736,307
effective search space: 46396697283
effective search space used: 46396697283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)