Your job contains 1 sequence.
>041891
MKAELRANTSSISLQNPSLFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVT
LAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVT
ELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKRPEGP
PSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEFKVIDDSSSAGDIVMSKLE
SSSSFHFESLLSHLSTPSILNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLH
LIKGLNPCIMIVVDEDSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADV
GHKIENIISFEGFQRIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGM
KREEEMLALTWKGHNSVFATAWVPNGLED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041891
(449 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 543 3.3e-96 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 303 1.7e-43 2
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 229 5.3e-36 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 238 4.6e-35 2
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 260 1.3e-34 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 248 1.7e-34 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 214 2.2e-32 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 234 4.5e-32 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 224 1.2e-29 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 198 1.3e-27 2
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 211 1.7e-26 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 189 4.0e-26 2
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 193 1.1e-25 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 222 3.4e-25 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 214 3.9e-25 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 230 2.5e-24 2
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 292 4.1e-24 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 214 7.6e-23 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 214 1.1e-22 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 172 2.3e-22 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 201 5.8e-22 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 194 1.2e-21 2
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 175 1.6e-21 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 164 2.9e-21 3
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 188 1.3e-20 2
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 188 3.6e-16 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 155 2.3e-12 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 153 9.3e-11 2
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 157 1.5e-09 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 123 9.3e-06 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 130 4.2e-05 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 115 4.5e-05 2
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 543 (196.2 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 124/268 (46%), Positives = 162/268 (60%)
Query: 19 LFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGD 78
+ N + P LRGC G D +E+LLLHCA+A++SND L Q++WVLNN+A P GD
Sbjct: 6 ILNPTRFPSPKPLRGC-G--DANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGD 62
Query: 79 PNQRLTSSFLRALISRASKVCPT---TLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFG 135
QRLTS+FLRAL+SRA PT T+S + HR SV ELA +VDL PWHRFG
Sbjct: 63 STQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHR--FSVVELAAFVDLTPWHRFG 120
Query: 136 FCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKR-PEGPPSLRITVPYSRPPV 194
F A+N+AI A++GYS VHI+D S+THCMQ PTLIDA+A R + PP L++TV S
Sbjct: 121 FIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHF 180
Query: 195 PPLLNVSAEEVGLRLGNFAKFRDVPFEFKVIDDSSSAGDIVMSKXXXXXXXXXXXXXXXX 254
PP +N+S EE+G +L NFA R++ EF ++ + S G
Sbjct: 181 PPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDG-------------FSSLLQQLR 227
Query: 255 XTPSILNLREDEALVINCQNWLRYLYDD 282
PS N EALV+NC LRY+ ++
Sbjct: 228 IYPSSFN----EALVVNCHMMLRYIPEE 251
Score = 433 (157.5 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 82/182 (45%), Positives = 126/182 (69%)
Query: 265 DEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASSL 324
+EALV+NC LRY+ ++ + + +SLR FL ++ LNP I+ +++ED DL++ +L
Sbjct: 234 NEALVVNCHMMLRYIPEEP---LTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENL 290
Query: 325 TSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEGFQRIERSESGSK 384
+R+ + FNY WIPFD +TF+ S QR YEA++ KIEN+++ EG +R+ER+E+ +
Sbjct: 291 VNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAEISWKIENVVAKEGAERVERTETKRR 347
Query: 385 LSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREE--EMLALTWKGHNSVFATAW 442
+RM+ A F + E+ V +V+++L+EHA GWGMK+E+ E L LTWKGH+ VFAT W
Sbjct: 348 WIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
Query: 443 VP 444
VP
Sbjct: 408 VP 409
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 303 (111.7 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 81/232 (34%), Positives = 119/232 (51%)
Query: 3 AELRANTSSISLQN-PSLFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVTL 61
A L + SS N PS F SIP S + + +LL A A D
Sbjct: 107 AALASPYSSSGHHNDPSAF-----SIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTAR 161
Query: 62 AQQVMWVLNNVASPVGDPNQRLTSSFLRALISR---ASKVCPTTLSNFNGSSTNHRRLMS 118
AQQ++W LN ++SP GD Q+L S FL+AL +R + + C T+ ++T
Sbjct: 162 AQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTM--VTAAATEKTCSFE 219
Query: 119 VTE--LAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKR 176
T + + ++ PW FG A+N AI +A+ G +K+HI+D S T C QWPTL++ALA R
Sbjct: 220 STRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATR 279
Query: 177 PEGPPSLRIT-VPYSRPPV--PPLLNVSAEEVGLRLGNFAKFRDVPFEFKVI 225
+ P LR+T V + V + +E+G R+ FA+ VPF+F +I
Sbjct: 280 SDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNII 331
Score = 208 (78.3 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 58/195 (29%), Positives = 95/195 (48%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L+++ DE L INC + GI A S RDA + + L P I+ VV+E++DL
Sbjct: 345 LDVKPDEVLAINCVGAMH--------GI-ASRGSPRDAVISSFRRLRPRIVTVVEEEADL 395
Query: 320 SASS-------LTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEG 372
C + + F++ E P+ S +RL E G I ++++ E
Sbjct: 396 VGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEP 455
Query: 373 FQRIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASG-WGMKR--EEEMLAL 429
ER E+ K S+RM+N+GF ++ + +E +VR+LL + G W M + + + L
Sbjct: 456 SDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFL 515
Query: 430 TWKGHNSVFATAWVP 444
W+ V+A+AW P
Sbjct: 516 CWRDQPVVWASAWRP 530
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 229 (85.7 bits), Expect = 5.3e-36, Sum P(2) = 5.3e-36
Identities = 56/164 (34%), Positives = 89/164 (54%)
Query: 282 DEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASSLTSRIA-TCFNYLWIPFD 340
D + + D+FL+ I GL+P +M+V ++DSD + S+L R+ + + Y + FD
Sbjct: 316 DSASSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAAL-FD 374
Query: 341 ALETFLPKESRQRLDYEADV-GHKIENIISFEGFQRIERSESGSKLSQRMKNAGFFSLPF 399
LET +P+ S+ R+ E + G +I+NIIS EGF+R ER E K SQR+ AGF ++P
Sbjct: 375 CLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPL 434
Query: 400 CEETVKEVRSLLDEHA-SGWGMKREEEMLALTWKGHNSVFATAW 442
+ + R LL G+ +K E + W+ +AW
Sbjct: 435 SYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAW 478
Score = 228 (85.3 bits), Expect = 5.3e-36, Sum P(2) = 5.3e-36
Identities = 64/217 (29%), Positives = 103/217 (47%)
Query: 10 SSISLQNPSLFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVL 69
S++SL P+L SS L+ G + LLL CA+ + S + A + L
Sbjct: 23 STMSLNRPTLL--ASSSPFHCLKDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQL 80
Query: 70 NNVASPVGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVTELAG-YVDL 128
+++ASP GD QR+ + F AL +R K P N + T + + + ++
Sbjct: 81 SHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHVRRLFFEM 140
Query: 129 IPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVP 188
P + + +N AI +A++G VH++D + QW L+ A RPEGPP LRIT
Sbjct: 141 FPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGV 200
Query: 189 YSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEFKVI 225
+ + V E++ RL A+ D+PF+F +
Sbjct: 201 HHQKEV-------LEQMAHRLIEEAEKLDIPFQFNPV 230
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 238 (88.8 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 69/217 (31%), Positives = 104/217 (47%)
Query: 18 SLFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVG 77
S +T I G R L ++ + L+ CA A+ ND+ +A +M L + S G
Sbjct: 95 SFDSTASQEING-WRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSG 153
Query: 78 DPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLI----PWHR 133
+P QRL + L L+++ + + N + TEL Y+ ++ P+ +
Sbjct: 154 EPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEP-----ASTELLSYMHILYEVCPYFK 208
Query: 134 FGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPP 193
FG+ ++N AI +A++ ++VHI+DF I QW TLI A A RP GPP +RIT
Sbjct: 209 FGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRIT-GIDDMT 267
Query: 194 VPPLLNVSAEEVGLRLGNFAKFRDVPFEFKVIDDSSS 230
VG RL AK +VPFEF + S S
Sbjct: 268 SAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVS 304
Score = 209 (78.6 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 50/187 (26%), Positives = 95/187 (50%)
Query: 257 PSILNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDED 316
P L +R EAL +N L ++ D+ ++ ++ RD L ++K L+P ++ +V+++
Sbjct: 308 PKNLGVRPGEALAVNFAFVLHHMPDES---VSTENH--RDRLLRMVKSLSPKVVTLVEQE 362
Query: 317 SDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQR 375
S+ + ++ R NY F++++ LP++ +QR++ E + + NII+ EG R
Sbjct: 363 SNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADR 422
Query: 376 IERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEEMLALTWKGHN 435
+ER E K R AGF P ++SLL ++ + ++ + L L W +
Sbjct: 423 VERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRD 482
Query: 436 SVFATAW 442
V + AW
Sbjct: 483 LVASCAW 489
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 260 (96.6 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 50/120 (41%), Positives = 79/120 (65%)
Query: 265 DEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASSL 324
+EALV+NC L Y+ D+ ++LR FL ++ LNP I+ ++DEDSD ++++
Sbjct: 89 NEALVVNCHMMLHYIPDE------ILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNF 142
Query: 325 TSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEGFQRIERSESGSK 384
SR+ + +NY+WIP+D E FL + S QR YEAD+ KI+N+++ EG +R+ER E S+
Sbjct: 143 ISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR 202
Score = 138 (53.6 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 34/73 (46%), Positives = 46/73 (63%)
Query: 164 MQWPTLIDALAKR--PEGPPSLRITVPYSRPPV--PPLLNVSAEEVGLRLGNFAKFRDVP 219
MQ PTLID++A + + PP L++TV S PPLL +S EE+G +L NFA R+V
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVA 60
Query: 220 FEFKVIDDSSSAG 232
EF++I S S G
Sbjct: 61 MEFRIISSSYSDG 73
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 248 (92.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 56/189 (29%), Positives = 100/189 (52%)
Query: 256 TPSILNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDE 315
+PS L + E L++N L ++ D+ +N RD LH++K LNP ++ VV++
Sbjct: 409 SPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQ-----RDELLHMVKSLNPKLVTVVEQ 463
Query: 316 DSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQ 374
D + + S R + Y F++L+ LP+ES++R++ E + I NI++ EG +
Sbjct: 464 DVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEE 523
Query: 375 RIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLL-DEHASGWGMKREEEMLALTWKG 433
RIER E+ K RM AGF P + +++L+ ++ + + +K E L W+
Sbjct: 524 RIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEE 583
Query: 434 HNSVFATAW 442
+ + A+AW
Sbjct: 584 KSLIVASAW 592
Score = 196 (74.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 58/190 (30%), Positives = 91/190 (47%)
Query: 44 EKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISR---ASKVCP 100
+++L+ CA AL + A ++ L + S GDP+QR+ + + L +R + K
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIY 282
Query: 101 TTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSI 160
L S M V ++ P +FGF A+N AI +AI+G +VHI+DF I
Sbjct: 283 RALKCKEPPSDERLAAMQVL-----FEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDI 337
Query: 161 THCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPF 220
Q+ TLI ++A+ P P LR+T V + +GLRL A+ V F
Sbjct: 338 NQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIG-GLRIIGLRLEQLAEDNGVSF 396
Query: 221 EFKVIDDSSS 230
+FK + +S
Sbjct: 397 KFKAMPSKTS 406
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 214 (80.4 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 50/184 (27%), Positives = 96/184 (52%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L++R+ EAL +N L +L D+ ++ ++ RD L ++K L+P ++ +V+++ +
Sbjct: 234 LDVRDGEALGVNFAYMLHHLPDES---VSMENH--RDRLLRMVKSLSPKVVTLVEQECNT 288
Query: 320 SASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQRIER 378
+ S R +Y F++++ LP+ ++R++ E + + NII+ EG +RIER
Sbjct: 289 NTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIER 348
Query: 379 SESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEEMLALTWKGHNSVF 438
E K R AGF P +R+LL ++++G+ ++ + L L W V
Sbjct: 349 HELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVS 408
Query: 439 ATAW 442
+ AW
Sbjct: 409 SCAW 412
Score = 207 (77.9 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 56/187 (29%), Positives = 92/187 (49%)
Query: 43 IEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVCPTT 102
++ +L+ CA A+ N++ +A+ M L + S G+P QRL + L L++R + +
Sbjct: 50 LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSI 109
Query: 103 LSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITH 162
+ +S + ++ P+ +FG+ ++N AI +A++ ++HI+DF I
Sbjct: 110 YKSLQSREPESYEFLSYVYVLH--EVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQ 167
Query: 163 CMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEF 222
QW LI A A RP G P++RIT V L+ V RL AK DVPF F
Sbjct: 168 GSQWIALIQAFAARPGGAPNIRIT-GVGDGSV--LVTVKK-----RLEKLAKKFDVPFRF 219
Query: 223 KVIDDSS 229
+ S
Sbjct: 220 NAVSRPS 226
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 234 (87.4 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 63/210 (30%), Positives = 101/210 (48%)
Query: 13 SLQNPSLFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNV 72
S N F + A+ + + ++ +L CA A+E+ D+ + ++ L +
Sbjct: 197 SYNNQGGFGQQHGVVSSAMYRSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQM 256
Query: 73 ASPVGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWH 132
S G+P QRL + L L++R + + L++ + Y + P+
Sbjct: 257 VSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHIL-Y-EACPYF 314
Query: 133 RFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPYSRP 192
+FG+ ++N AI +A++ S VHI+DF I+ QW +LI AL RP GPP++RIT P
Sbjct: 315 KFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRIT-GIDDP 373
Query: 193 PVPPLLNVSAEEVGLRLGNFAKFRDVPFEF 222
E VG RLG A+ VPFEF
Sbjct: 374 RSSFARQGGLELVGQRLGKLAEMCGVPFEF 403
Score = 189 (71.6 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 44/184 (23%), Positives = 92/184 (50%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L +R EAL +N L ++ D+ + ++ RD L L+K L+P ++ +V+++++
Sbjct: 418 LGVRNGEALAVNFPLVLHHMPDES---VTVENH--RDRLLRLVKHLSPNVVTLVEQEANT 472
Query: 320 SASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQRIER 378
+ + R N+ F++++ L ++ ++R++ E + ++ N+I+ EG +R ER
Sbjct: 473 NTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREER 532
Query: 379 SESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEEMLALTWKGHNSVF 438
E K R AGF P ++ LL+ ++ + ++ + L L WK +
Sbjct: 533 HEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLIT 592
Query: 439 ATAW 442
+ AW
Sbjct: 593 SCAW 596
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 224 (83.9 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 58/185 (31%), Positives = 92/185 (49%)
Query: 43 IEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVCPTT 102
+ LL+HCA A+ ++D A Q++ + ++P GD NQRL F L +R + T
Sbjct: 344 LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEAR---LAGTG 400
Query: 103 LSNFNGSSTNHRRLMSVTELAG-YVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSIT 161
+ G + R +V + ++ P+ + + +N I + +VH++DF I
Sbjct: 401 SQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGIL 460
Query: 162 HCMQWPTLIDALAKRPEGPPSLRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPF 220
+ QWPTLI + G P +RIT + + +P P V EE G RL +AK VPF
Sbjct: 461 YGFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRV--EETGQRLAAYAKLFGVPF 516
Query: 221 EFKVI 225
E+K I
Sbjct: 517 EYKAI 521
Score = 180 (68.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L++ DE V+NC L+D+ + + S RD L+LI +NP + + +
Sbjct: 533 LDIDRDEITVVNCLYRAENLHDES---VKVE--SCRDTVLNLIGKINPDLFVFGIVNGAY 587
Query: 320 SASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEGFQRIER 378
+A +R + FD LET +P+E +R+ E +V G + N+I+ EG++R+ER
Sbjct: 588 NAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVER 647
Query: 379 SESGSKLSQRMKNAGFFSLPFCEETVK-EVRSLLDEHASGWGMKREEEMLALTWKGHNSV 437
E+ + R +G +PF +K + + + + + ++ L WKG +
Sbjct: 648 PETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVM 707
Query: 438 FATAWVP 444
+ W P
Sbjct: 708 ALSVWKP 714
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 198 (74.8 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 50/187 (26%), Positives = 93/187 (49%)
Query: 41 ACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVCP 100
A + LL+ CA A+ +D A +++ + +SP+G+ ++RL F +L +R +
Sbjct: 391 ADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGT 450
Query: 101 TTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSI 160
+ + T+ ++ + Y+ + P+ + +N ++ + + +HI+DF I
Sbjct: 451 QIYTALSSKKTSAADMLKAYQT--YMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGI 508
Query: 161 THCMQWPTLIDALA-KRPEGPPSLRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDV 218
++ QWP LI L+ RP G P LRIT + + P V +E G RL + + +V
Sbjct: 509 SYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGV--QETGHRLARYCQRHNV 566
Query: 219 PFEFKVI 225
PFE+ I
Sbjct: 567 PFEYNAI 573
Score = 190 (71.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 55/189 (29%), Positives = 95/189 (50%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L LR+ E +V+N R L D+ +N S RDA L LI+ +NP + I +
Sbjct: 585 LKLRQGEYVVVNSLFRFRNLLDETVL-VN----SPRDAVLKLIRKINPNVFIPAILSGNY 639
Query: 320 SASSLTSRIATC-FNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEGFQRIE 377
+A +R F+Y + FD ++ L +E RL YE + G +I N+++ EG +R+E
Sbjct: 640 NAPFFVTRFREALFHYSAV-FDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVE 698
Query: 378 RSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDE-HASGWGMKREEEMLALTWKGHNS 436
R E+ + R+ AGF LP +E ++ ++ ++ + + + + L WKG
Sbjct: 699 RPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIV 758
Query: 437 VFATAWVPN 445
++ WVP+
Sbjct: 759 YASSLWVPS 767
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 211 (79.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 59/190 (31%), Positives = 93/190 (48%)
Query: 40 GACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVC 99
G + LL CA A++ N++ LA ++ + +AS +++ + F L R ++
Sbjct: 149 GVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIY 208
Query: 100 P---TTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHIL 156
P LS+F+ + H + + P+ +F +N AI + KVH++
Sbjct: 209 PRDDVALSSFSDTLQIH-----------FYESCPYLKFAHFTANQAILEVFATAEKVHVI 257
Query: 157 DFSITHCMQWPTLIDALAKRPEGPPSLRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKF 215
D + H +QWP LI ALA RP GPP R+T + YS L ++ +EVG +LG A
Sbjct: 258 DLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYS------LTDI--QEVGWKLGQLAST 309
Query: 216 RDVPFEFKVI 225
V FEFK I
Sbjct: 310 IGVNFEFKSI 319
Score = 159 (61.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 296 DAFLHLIKGLNPCIMIVVDEDSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLD 355
D FL IK + P IM VV+++++ + + R +Y FD+LE P S+ R+
Sbjct: 360 DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEG--PP-SQDRVM 416
Query: 356 YEADVGHKIENIISFEGFQRIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHA 415
E +G +I N+++ EG R+ER E+ ++ R GF + K+ LL +A
Sbjct: 417 SELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYA 476
Query: 416 S--GWGMKREEEMLALTWKGHNSVFATAWVPNGLE 448
G+ ++ E L L W+ + +AW N +E
Sbjct: 477 GADGYNVEENEGCLLLGWQTRPLIATSAWRINRVE 511
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 189 (71.6 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 40 GACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVC 99
G + L+ CA A+ ++ LA ++ + +A ++ + F +AL R +
Sbjct: 177 GVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYR-- 234
Query: 100 PTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFS 159
T ++ N V E+ Y + P+ +F +N AI +A+ +VH++D
Sbjct: 235 DYTAETDVCAAVNPS-FEEVLEMHFY-ESCPYLKFAHFTANQAILEAVTTARRVHVIDLG 292
Query: 160 ITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVP 219
+ MQWP L+ ALA RP GPPS R+T PP + S +++G +L FA+ V
Sbjct: 293 LNQGMQWPALMQALALRPGGPPSFRLTG--IGPPQTENSD-SLQQLGWKLAQFAQNMGVE 349
Query: 220 FEFK 223
FEFK
Sbjct: 350 FEFK 353
Score = 181 (68.8 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 53/189 (28%), Positives = 91/189 (48%)
Query: 257 PSILNLR-EDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDE 315
P + R E E LV+N L L A+ S+ + L+ +K + P I+ VV++
Sbjct: 365 PEMFETRPESETLVVNSVFELHRLL--------ARSGSI-EKLLNTVKAIKPSIVTVVEQ 415
Query: 316 DSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEGFQR 375
+++ + R +Y FD+LE S+ R+ E +G +I N+++ EG R
Sbjct: 416 EANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDR 475
Query: 376 IERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEE--MLALTWKG 433
+ER E+ ++ RMK+AGF + K+ LL +A+G G + EE L + W+
Sbjct: 476 VERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQT 535
Query: 434 HNSVFATAW 442
+ +AW
Sbjct: 536 RPLITTSAW 544
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 193 (73.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 59/216 (27%), Positives = 98/216 (45%)
Query: 16 NPSLFNTGQSSIPGAL--RGCLGSLDGAC-IEKLLLHCASALESNDVTLAQQVMWVLNNV 72
+P + G++ AL +G A LL CA ++ + D A ++ +
Sbjct: 285 DPQIIEDGENGSSKALVKKGRAKKKSRAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQ 344
Query: 73 ASPVGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMS--VTELAGYVDLIP 130
SPVGD +QRL F AL +R T + ++ S ++ +R + + + ++ P
Sbjct: 345 CSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASP 404
Query: 131 WHRFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRIT-VPY 189
+ + SN I A + S +HI+DF I + QWP I L+K G LRIT +
Sbjct: 405 FMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEI 464
Query: 190 SRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEFKVI 225
+ + P + ++ G RL + K VPFE+ I
Sbjct: 465 PQHGLRPTERI--QDTGRRLTEYCKRFGVPFEYNAI 498
Score = 176 (67.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 262 LREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSA 321
+R +E L +N + L D I ++ RD FL LI+ +NP + + + +A
Sbjct: 513 IRPNEVLAVNAVLRFKNLRDV----IPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNA 568
Query: 322 SSLTSRIATC-FNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEGFQRIERS 379
T+R F+Y + FD L KE+ +R+ +E + G ++ N+I+ EG R+ER
Sbjct: 569 PFFTTRFKEALFHYSAL-FDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERP 627
Query: 380 ESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDE--HASGWGMKREEEMLALTWKGHNSV 437
E+ + RM AGF P E V+ R + + + + + + WKG
Sbjct: 628 ETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILF 687
Query: 438 FATAWVPN 445
++ WVP+
Sbjct: 688 SSSCWVPS 695
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 222 (83.2 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 58/186 (31%), Positives = 100/186 (53%)
Query: 39 DGACIEKLLLHCASALESNDVTLAQQVMWVLNNVA-SPVGDPNQRLTSSFLRALISRASK 97
+G + LL CA A++ ++T+A+ ++ + +A S +G +++ + F AL R +
Sbjct: 165 NGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIG-AMRKVATYFAEALARRIYR 223
Query: 98 VCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILD 157
+ P+ S +H +S T + + P+ +F +N AI +A QG +VH++D
Sbjct: 224 LSPSQ------SPIDHS--LSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVID 275
Query: 158 FSITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRD 217
FS++ +QWP L+ ALA RP GPP R+T PP P + EVG +L + A+
Sbjct: 276 FSMSQGLQWPALMQALALRPGGPPVFRLTG--IGPPAPDNFDY-LHEVGCKLAHLAEAIH 332
Query: 218 VPFEFK 223
V FE++
Sbjct: 333 VEFEYR 338
Score = 135 (52.6 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 296 DAFLHLIKGLNPCIMIVVDEDSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLD 355
D L ++ + P I VV+++S+ ++ R +Y FD+LE +P + ++
Sbjct: 382 DKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEG-VPS-GQDKVM 439
Query: 356 YEADVGHKIENIISFEGFQRIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHA 415
E +G +I N+++ +G R+ER E+ S+ R +AGF + K+ LL
Sbjct: 440 SEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFN 499
Query: 416 SGWGMKREEE--MLALTWKGHNSVFATAW 442
G G + EE L L W + +AW
Sbjct: 500 GGEGYRVEESDGCLMLGWHTRPLIATSAW 528
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 214 (80.4 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 54/185 (29%), Positives = 95/185 (51%)
Query: 39 DGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKV 98
+G + L+ CA A++ N++TLA+ ++ + +A +++ + F AL R ++
Sbjct: 217 NGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRL 276
Query: 99 CPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDF 158
P + +H +S T + + P+ +F +N AI +A +G +VH++DF
Sbjct: 277 SPPQ------NQIDH--CLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDF 328
Query: 159 SITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDV 218
S+ +QWP L+ ALA R GPP+ R+T PP P + EVG +L A+ V
Sbjct: 329 SMNQGLQWPALMQALALREGGPPTFRLTG--IGPPAPDNSD-HLHEVGCKLAQLAEAIHV 385
Query: 219 PFEFK 223
FE++
Sbjct: 386 EFEYR 390
Score = 145 (56.1 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 53/189 (28%), Positives = 86/189 (45%)
Query: 258 SILNLR--EDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDE 315
S+L LR + EA+ +N L L G GI + L ++K + P I VV++
Sbjct: 403 SMLELRPSDTEAVAVNSVFELHKLLGRPG-GI--------EKVLGVVKQIKPVIFTVVEQ 453
Query: 316 DSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEGFQR 375
+S+ + R +Y FD+LE +P S+ ++ E +G +I N+++ EG R
Sbjct: 454 ESNHNGPVFLDRFTESLHYYSTLFDSLEG-VPN-SQDKVMSEVYLGKQICNLVACEGPDR 511
Query: 376 IERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEE--MLALTWKG 433
+ER E+ S+ R ++G K+ LL SG G + EE L L W
Sbjct: 512 VERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHT 571
Query: 434 HNSVFATAW 442
+ +AW
Sbjct: 572 RPLITTSAW 580
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 230 (86.0 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 62/185 (33%), Positives = 94/185 (50%)
Query: 43 IEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRAS-KVCPT 101
+ LL CA A+ S D A + + +S GD QRL F AL +R + + P
Sbjct: 224 LRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPP 283
Query: 102 TLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSIT 161
+ F S+T+ ++ +L +V P + + A+N +I++ +K+HI+DF +
Sbjct: 284 VSNPFPSSTTSMVDILKAYKL--FVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVL 341
Query: 162 HCMQWPTLIDALAKRPEGPPSLRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPF 220
+ QWP L+ AL+KRP GPP LR+T + + P V EE G RL F +VPF
Sbjct: 342 YGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRV--EETGRRLKRFCDQFNVPF 399
Query: 221 EFKVI 225
EF I
Sbjct: 400 EFNFI 404
Score = 120 (47.3 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 45/191 (23%), Positives = 86/191 (45%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L + E V+NC + L+Y DE ++ S RD L L + +NP + + + +
Sbjct: 416 LMINPGETTVVNCIHRLQYT-PDETVSLD----SPRDTVLKLFRDINPDLFVFAEINGMY 470
Query: 320 SASSLTSRIATC-FNYLWIPFDALETFLPKE----SRQRLDYEADVGHKIENIISFEGFQ 374
++ +R F+Y + FD +T + E +R L+ E V + ++IS EG +
Sbjct: 471 NSPFFMTRFREALFHYSSL-FDMFDTTIHAEDEYKNRSLLERELLVRDAM-SVISCEGAE 528
Query: 375 RIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDE-HASGWGMKREEEMLALTWKG 433
R R E+ + R+ AGF ++ +KE + ++ + + + + + + WKG
Sbjct: 529 RFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKG 588
Query: 434 HNSVFATAWVP 444
+ W P
Sbjct: 589 RVIYAFSCWKP 599
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 292 (107.8 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 114/418 (27%), Positives = 178/418 (42%)
Query: 46 LLLHCASALESNDVTLAQQVMW-VLNNVASPVGDPNQRLTSSFLRALISRASKVCPTTLS 104
LLL CA L+ D+ A++ VL ASP GD RL F RAL R
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHV 112
Query: 105 NFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCM 164
G + R S LA + + P+ RF +N AI +A+ G +VHILD H +
Sbjct: 113 VVGGGAA--RPASSGAYLA-FNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGV 169
Query: 165 QWPTLIDALAKRPE---GPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFE 221
QWP L+ A+A+R + GPP +R+T + LL G RL FA+ +PF
Sbjct: 170 QWPPLLQAIAERADPALGPPEVRVTGAGADRDT--LLRT-----GNRLRAFARSIHLPFH 222
Query: 222 FK--VIDDSSSAGDIVMSKXXXXXXXXXXXXXXXXXTPSILNLREDEALVINCQNWLRYL 279
F ++ +++A V L DE L +NC + +L
Sbjct: 223 FTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATG-----LEFHPDETLAVNC---VMFL 274
Query: 280 YDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASS------LTSRIATCFN 333
++ G A AFL +K ++P ++ + + ++ L R+ +
Sbjct: 275 HNLAGHDELA-------AFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMD 327
Query: 334 YLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEG---FQRIERSESGSKLSQRM 389
+ F+ALE +P SR+RL E +V G +IE + G ++ IER ++
Sbjct: 328 HYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARA---- 383
Query: 390 KNAGFFSLPFCEETVKEVRSLLDEH--ASGWGMKREEEMLALTWKGHNSVFATAWVPN 445
AGF + P V + R LL H + G+ ++ L W+ + +AW P+
Sbjct: 384 --AGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQPS 439
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 214 (80.4 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 59/180 (32%), Positives = 91/180 (50%)
Query: 45 KLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVCPTTLS 104
K + CA +S D A + + + S +GDP +R+ F AL +R S P T S
Sbjct: 219 KAIYDCARISDS-DPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPATSS 277
Query: 105 NFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCM 164
+ SS+ ++S L D P+ +F +N AI +A + +K+HI+DF I +
Sbjct: 278 S---SSSTEDLILSYKTLN---DACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGI 331
Query: 165 QWPTLIDALAKRPEGPPS-LRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEF 222
QWP L+ ALA R G P+ +R++ +P P + S G RL +FAK D+ F+F
Sbjct: 332 QWPALLQALATRTSGKPTQIRVSGIP--APSLGESPEPSLIATGNRLRDFAKVLDLNFDF 389
Score = 123 (48.4 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 41/150 (27%), Positives = 69/150 (46%)
Query: 265 DEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASSL 324
DE L +N L L D+ ++ D L L K LNP ++ + + + L+
Sbjct: 409 DEVLAVNFMLQLYKLLDET--------PTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGF 460
Query: 325 TSRIATCFNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFE--GFQRIERSES 381
+R+ + F++LE L ++S +R+ E ++ G +I +I E G R ER E
Sbjct: 461 ANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR-ERMEE 519
Query: 382 GSKLSQRMKNAGFFSLPFCEETVKEVRSLL 411
+ M+NAGF S+ V + + LL
Sbjct: 520 KEQWRVLMENAGFESVKLSNYAVSQAKILL 549
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 214 (80.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 63/199 (31%), Positives = 100/199 (50%)
Query: 36 GSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISR- 94
G+ +G EKLL CA A+ +++ + Q + VL+ +AS GD N+RL + LRAL
Sbjct: 138 GNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHL 197
Query: 95 -ASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSK- 152
+S V + F +S + L + ++ PW +NSAI + + K
Sbjct: 198 SSSSVSSSFWPVFTFASAEVKMFQKT--LLKFYEVSPWFALPNNMANSAILQILAQDPKD 255
Query: 153 ---VHILDFSITHCMQWPTLIDALAKRPEGPPS-LRITVPYS-RPPVPPLLNVSAEEVGL 207
+HI+D ++H MQWPTL++AL+ R EGPP +RITV +P + G
Sbjct: 256 KKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGS 315
Query: 208 RLGNFAKFRDVPFEFKVID 226
+L FA+ + + V+D
Sbjct: 316 QLLGFARSLKINLQISVLD 334
Score = 119 (46.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 38/152 (25%), Positives = 71/152 (46%)
Query: 295 RDAFLHLIKGLNPCIMIVVDEDSDLSASS-LTSRIATCFNYLWIPFDALET-FLPKESRQ 352
R L ++ L P +++ + + + S+S+ + + Y+W D+ + F + S +
Sbjct: 366 RGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSEE 425
Query: 353 RLDYEADVGHKIENIISFEGFQRIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLD 412
R E + + N G + +E K +RM+ AGFF F E+ V +SLL
Sbjct: 426 RKLMEGEATKVLMNA----G----DMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLR 477
Query: 413 EHASGWGMKREE-EMLA-LTWKGHNSVFATAW 442
++ + W ++ E+ + A L WKG F + W
Sbjct: 478 KYDNNWEIRMEDGDTFAGLMWKGEAVSFCSLW 509
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 172 (65.6 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 47/183 (25%), Positives = 88/183 (48%)
Query: 40 GACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVC 99
G + + L+ CA A++ +++LA ++ + +A+ ++ + F AL R ++
Sbjct: 154 GVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIH 213
Query: 100 PTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFS 159
P+ + + ++ + + D P+ +F +N AI +A+ VH++D
Sbjct: 214 PSAAA----IDPSFEEILQMN----FYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLG 265
Query: 160 ITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVP 219
+ MQWP L+ ALA RP GPPS R+T + P +E+G +L A+ V
Sbjct: 266 LNQGMQWPALMQALALRPGGPPSFRLTGVGN-----PSNREGIQELGWKLAQLAQAIGVE 320
Query: 220 FEF 222
F+F
Sbjct: 321 FKF 323
Score = 163 (62.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 52/189 (27%), Positives = 92/189 (48%)
Query: 257 PSILNLR-EDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDE 315
P + R E E LV+N ++ E + +Q S+ + L +K + P ++ VV++
Sbjct: 336 PDMFETRTESETLVVNS------VF--ELHPVLSQPGSI-EKLLATVKAVKPGLVTVVEQ 386
Query: 316 DSDLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEGFQR 375
+++ + R +Y FD+LE + S+ R+ E +G +I N+++ EG R
Sbjct: 387 EANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDR 446
Query: 376 IERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEE--MLALTWKG 433
IER E+ ++ +RM +AGF + + K+ LL G G + EE L L W+
Sbjct: 447 IERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQT 506
Query: 434 HNSVFATAW 442
+ A+AW
Sbjct: 507 KPLIAASAW 515
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 201 (75.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 60/184 (32%), Positives = 88/184 (47%)
Query: 43 IEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKVCPTT 102
+ LL+ CA A+ S D A + + + +S GD QRL F AL +R + T
Sbjct: 209 MRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTP 268
Query: 103 LSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITH 162
+S S T+ ++ + G+V P + +N I + + +HI+DF I +
Sbjct: 269 ISA-TSSRTSMVDILKAYK--GFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILY 325
Query: 163 CMQWPTLIDALAKRPEGPPSLRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFE 221
QWP LI AL+KR GPP LR+T + + P V EE G RL F +VPFE
Sbjct: 326 GFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERV--EETGRRLKRFCDKFNVPFE 383
Query: 222 FKVI 225
+ I
Sbjct: 384 YSFI 387
Score = 129 (50.5 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 43/187 (22%), Positives = 80/187 (42%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L + E V+NC L+Y DE +N S RD L L + +NP + + + +
Sbjct: 399 LVINSGETTVVNCILRLQYT-PDETVSLN----SPRDTALKLFRDINPDLFVFAEINGTY 453
Query: 320 SASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQRIER 378
++ +R + FD ET L ++ R E + + ++I+ EG +R R
Sbjct: 454 NSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFAR 513
Query: 379 SESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDE-HASGWGMKREEEMLALTWKGHNSV 437
E+ + R+ AGF ++ VK+ + ++ E + + + + + WKG
Sbjct: 514 PETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLY 573
Query: 438 FATAWVP 444
+ W P
Sbjct: 574 AVSCWKP 580
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 194 (73.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 39 DGACIEKLL---LHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRA 95
DGA KLL L CA + ++ + A ++ ++ + SP G +R+ + F +AL +R
Sbjct: 33 DGAAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRV 92
Query: 96 -----SKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGY 150
S C + LS + +++ S L Y + P +F +N AIF+A+ G
Sbjct: 93 ISSYLSGAC-SPLSEKPLTVVQSQKIFSA--LQTYNSVSPLIKFSHFTANQAIFQALDGE 149
Query: 151 SKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLG 210
VHI+D + +QWP L LA RP S+RIT S LL G RL
Sbjct: 150 DSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSD---LL----ASTGRRLA 202
Query: 211 NFAKFRDVPFEFKVID 226
+FA ++PFEF I+
Sbjct: 203 DFASSLNLPFEFHPIE 218
Score = 127 (49.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 51/190 (26%), Positives = 85/190 (44%)
Query: 257 PSILNLREDEALVINCQNWLRY-LYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDE 315
PS L R+ EA+V++ W+++ LYD G + L +++ L P ++ VV++
Sbjct: 227 PSQLATRQGEAVVVH---WMQHRLYDVTGNNLET---------LEILRRLKPNLITVVEQ 274
Query: 316 DSDLS-ASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEGF 373
+ S R +Y FDAL L +ES +R E V G +I NI++ G
Sbjct: 275 ELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGG 334
Query: 374 QRIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHA-SGWGMKREEEMLALTWK 432
+R +R K + + GF + + LL +G+ + E L L WK
Sbjct: 335 RR-KRM----KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWK 389
Query: 433 GHNSVFATAW 442
+ + A+AW
Sbjct: 390 DLSLLTASAW 399
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 175 (66.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 47/160 (29%), Positives = 84/160 (52%)
Query: 259 ILNLREDEALVINCQNWL-RYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDS 317
+L+++E E++ +NC + + LYD G A++RD FL LI+ NP +++ ++++
Sbjct: 462 MLHVKEGESVAVNCVMQMHKTLYDGTG-------AAIRD-FLGLIRSTNPIALVLAEQEA 513
Query: 318 DLSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEGFQRI 376
+ ++ L +R+ Y FDA+ T L +S R+ E + G +I NI++ EG R
Sbjct: 514 EHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQ 573
Query: 377 ERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHAS 416
ER + ++ GF SL E V + + LL + S
Sbjct: 574 ERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGS 613
Score = 155 (59.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 52/186 (27%), Positives = 86/186 (46%)
Query: 46 LLLHCASALESNDVTLAQQVMWVLNNVASPVG-DPNQRLTSSFLRALISRASKVCPTTLS 104
LL C A+ S ++ + ++ASP G P RL + ++ AL R +++ P +
Sbjct: 277 LLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPH-IF 335
Query: 105 NFNGSSTNHRRLM--SVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITH 162
+ R + S L + P +F +N + +A +G +VHI+DF I
Sbjct: 336 HIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQ 395
Query: 163 CMQWPTLIDALAKRPEGPPSLRIT-VPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFE 221
+QWP+ +LA R P +RIT + S+ + E G RL FA+ ++ FE
Sbjct: 396 GLQWPSFFQSLASRINPPHHVRITGIGESK--------LELNETGDRLHGFAEAMNLQFE 447
Query: 222 FK-VID 226
F V+D
Sbjct: 448 FHPVVD 453
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 164 (62.8 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 46/186 (24%), Positives = 88/186 (47%)
Query: 260 LNLREDEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDL 319
L+ + E + +NC ++L +++D+G I FL IK LN I+ + + +++
Sbjct: 267 LSAVQGETIAVNCVHFLHKIFNDDGDMIGH--------FLSAIKSLNSRIVTMAEREANH 318
Query: 320 SASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQRIER 378
S +R + ++ FD+LE LP SR+RL E G +I ++++ E +R +R
Sbjct: 319 GDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQR 378
Query: 379 SESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEH--ASGWGMKREEEMLALTWKGHNS 436
+ MK GF ++P + + + LL H + G+ ++ L L W+
Sbjct: 379 HRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPL 438
Query: 437 VFATAW 442
++W
Sbjct: 439 FSVSSW 444
Score = 121 (47.7 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 44/113 (38%), Positives = 55/113 (48%)
Query: 128 LIPWHRFGFCASNSAIFKAIQGYSK--VHILDFSITHCMQWPTLIDALAKR---PEGPP- 181
L P+ RFG +N AI A + +HILD I+ +QWP L+ ALA+R P PP
Sbjct: 152 LTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPP 211
Query: 182 SLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEFK--VIDDSSSAG 232
SLRIT R LN G RL FA + F+F VI + AG
Sbjct: 212 SLRIT-GCGRDVTG--LN----RTGDRLTRFADSLGLQFQFHTLVIVEEDLAG 257
Score = 76 (31.8 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 43 IEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASK 97
+ +LL A+ + ++ T AQ ++ +L+ +SP GD +RL F +AL R ++
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRINR 95
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 188 (71.2 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 55/190 (28%), Positives = 94/190 (49%)
Query: 39 DGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDPNQRLTSSFLRALISRASKV 98
+G + LLL CA A+ ++++ A +++ ++ +++P G QR+ + F A+ +R
Sbjct: 286 EGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNS 345
Query: 99 CP---TTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHI 155
C L + T+ +++S ++ + + P +F +N AI +A + VHI
Sbjct: 346 CLGIYAALPSRWMPQTHSLKMVSAFQV--FNGISPLVKFSHFTANQAIQEAFEKEDSVHI 403
Query: 156 LDFSITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPPVPPLLNVSAEEV---GLRLGNF 212
+D I +QWP L LA RP GPP +R+T L S E + G RL +F
Sbjct: 404 IDLDIMQGLQWPGLFHILASRPGGPPHVRLTG----------LGTSMEALQATGKRLSDF 453
Query: 213 AKFRDVPFEF 222
A +PFEF
Sbjct: 454 ADKLGLPFEF 463
Score = 132 (51.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 51/188 (27%), Positives = 85/188 (45%)
Query: 260 LNLREDEALVINCQNWLRY-LYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSD 318
LN+R+ EA+ ++ WL++ LYD + DA L L++ L P ++ VV++D
Sbjct: 478 LNVRKREAVAVH---WLQHSLYD-----VTGSDAHT----LWLLQRLAPKVVTVVEQDLS 525
Query: 319 LSASSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEADVGHK-IENIISFEGFQRIE 377
A S R +Y FD+L +ES +R E + K I N+++ G R
Sbjct: 526 -HAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSG 584
Query: 378 RSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHAS-GWGMKREEEMLALTWKGHNS 436
+ S ++M+ GF + + LL S G+ + + L L WK +
Sbjct: 585 EVKFES-WREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSL 643
Query: 437 VFATAWVP 444
+ A+AW P
Sbjct: 644 LTASAWTP 651
Score = 49 (22.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 177 PEGPPSLRITVPYSRPPVPPL 197
P+ PPSL S P PPL
Sbjct: 81 PQQPPSLTAAATVSSQPNPPL 101
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 188 (71.2 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 49/179 (27%), Positives = 88/179 (49%)
Query: 265 DEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASSL 324
DE L +N L Y DE + ++ RD L +KGL P ++ +V+++ + + +
Sbjct: 467 DETLAVNLAFKL-YRVPDES--VCTENP--RDELLRRVKGLKPRVVTLVEQEMNSNTAPF 521
Query: 325 TSRIA-TCFNYLWIPFDALETFLPKESRQRLDYEADVGHKIENIISFEGFQRIERSESGS 383
R++ +C Y + +++E+ +P + R E +G K+ N ++ EG RIER E
Sbjct: 522 LGRVSESCACYGAL-LESVESTVPSTNSDRAKVEEGIGRKLVNAVACEGIDRIERCEVFG 580
Query: 384 KLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKREEEMLALTWKGHNSVFATAW 442
K RM AGF +P E+ + ++S + G+ +K + + W G A+AW
Sbjct: 581 KWRMRMSMAGFELMPLSEKIAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAW 639
Score = 89 (36.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 42/168 (25%), Positives = 72/168 (42%)
Query: 16 NPSLFNTGQSSIPGALRGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASP 75
NP L + SS + + C + ++ A+A+ +A +++ ++ +
Sbjct: 238 NPVLSFSPSSSSSSSSPSTASTTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNL 297
Query: 76 VGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFG 135
+ ++L + AL SR + P T G H L+S T+L Y +L P + G
Sbjct: 298 ERNSEEKLVDFMVAALRSRIAS--PVT--ELYGKE--H--LIS-TQLL-Y-ELSPCFKLG 346
Query: 136 FCASNSAIFKAIQ----GYSKVHILDFSITHCMQWPTLIDALAKRPEG 179
F A+N AI A G H++DF I Q+ L+ L+ R G
Sbjct: 347 FEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNG 394
Score = 37 (18.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 67 WVLNNVASPVGDPNQRLTSSFLRALISRASKVCPTTLS 104
W+ N+ +P +PN L+ S + S + TT S
Sbjct: 226 WI-QNLVTPNPNPNPVLSFSPSSSSSSSSPSTASTTTS 262
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 155 (59.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 51/152 (33%), Positives = 75/152 (49%)
Query: 74 SPVGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHR 133
S GDP QR+ F AL + ++ P++ S SS+ ++S L D P+ +
Sbjct: 203 SESGDPIQRVGYYFAEALSHKETE-SPSSSS----SSSLEDFILSYKTLN---DACPYSK 254
Query: 134 FGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPYSRPP 193
F +N AI +A + +HI+DF I +QW L+ ALA R G P+ RI + S P
Sbjct: 255 FAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPT-RIRI--SGIP 311
Query: 194 VPPLLNVSAEEV---GLRLGNFAKFRDVPFEF 222
P L + + G RL +FA D+ FEF
Sbjct: 312 APSLGDSPGPSLIATGNRLRDFAAILDLNFEF 343
Score = 86 (35.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 40/187 (21%), Positives = 79/187 (42%)
Query: 265 DEALVINCQNWLRYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDEDSDLSASSL 324
DE LV+N L L D+ + L L + LNP I+ + + + L+
Sbjct: 363 DEVLVVNFMLELYKLLDETATTVGTA--------LRLARSLNPRIVTLGEYEVSLNRVEF 414
Query: 325 TSRIATCFNYLWIPFDALETFLPKESRQRLDYEADV-GHKIENIISFEGFQRIERSESG- 382
+R+ + F++LE L ++S++RL E + G +I +++ + + G
Sbjct: 415 ANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGL 474
Query: 383 --SKLSQR--MKNAGFFSLPFCEETVKEVRSLL--DEHASGWGMKREEE-MLALTWKGHN 435
K R M+ AGF + V + + LL +++ + + E ++L W
Sbjct: 475 MEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVP 534
Query: 436 SVFATAW 442
+ ++W
Sbjct: 535 LLTVSSW 541
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 153 (58.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 61 LAQQVMWVLNNVASPVGDPN-QRLTSSF---LRALISRASKVCPTTLSNFNGSSTNHRRL 116
L + ++ L ++ SP N +RL + F L L+ R S +CP + +
Sbjct: 124 LTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKLLERDSVLCP---QQHRDDVYDQADV 180
Query: 117 MSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLIDALAKR 176
+S EL ++ P+ FG+ + AI +A++ ++HI+D+ I +QW +L+ AL R
Sbjct: 181 ISAFELLQ--NMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEGVQWASLMQALVSR 238
Query: 177 PEGPPS--LRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEFK 223
GP + LRIT SR + +E G RL FA PF ++
Sbjct: 239 NTGPSAQHLRITA-LSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQ 286
Score = 71 (30.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 49/189 (25%), Positives = 75/189 (39%)
Query: 258 SILNLREDEALVINCQNWL-RYLYDDEGRGINAQDASLRDAFLHLIKGLNPCIMIVVDED 316
S L L EA+VINC L R+ + Q S +FL K LNP ++ +V E+
Sbjct: 298 SSLKLVRGEAVVINCMLHLPRFSH---------QTPSSVISFLSEAKTLNPKLVTLVHEE 348
Query: 317 SDLSASS-LTSRIATCFNYLWIPFDALETFLPKESRQRLDYE-ADVGHKIENIISFEGFQ 374
L + R + FD+LE L + R E +G + N ++
Sbjct: 349 VGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITAN 408
Query: 375 RIERSESGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEHASGWGMKR-EEEMLALTWKG 433
E ES + Q ++ GF L + + LL G+ ++ + L L WK
Sbjct: 409 DAE-VESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDGFRVEELGQNGLVLGWKS 467
Query: 434 HNSVFATAW 442
V A+ W
Sbjct: 468 RRLVSASFW 476
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 157 (60.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 50/185 (27%), Positives = 90/185 (48%)
Query: 43 IEKLLLHCASALESNDVTLAQQVMWVLNN-VASPVGDPNQRLTSSFLRALISRASKVCPT 101
I + L+ A +ES D LAQ ++ LN ++SPVG P +R F AL +
Sbjct: 205 ITEQLVKAAEVIES-DTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNN-------- 255
Query: 102 TLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSIT 161
L N + + + + + + ++ P +F SN A+ ++ G+ ++HI+DF I
Sbjct: 256 LLHNVSQTLNPYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIG 315
Query: 162 HCMQWPTLIDALAKRPEGPP-SLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPF 220
+ QW +L+ L R P SL+ITV ++ P L + + L+ +FA ++
Sbjct: 316 YGGQWASLMQELVLRDNAAPLSLKITV-FASPANHDQLELGFTQDNLK--HFASEINISL 372
Query: 221 EFKVI 225
+ +V+
Sbjct: 373 DIQVL 377
Score = 57 (25.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 34/160 (21%), Positives = 64/160 (40%)
Query: 287 INAQDASLRDAFLHLIKGLNPCIMIVVD---EDSDLSASSLTSRIATCFNYLWIPFDALE 343
I+A S L +K L+P I++ D E +DL S + L+ DA+
Sbjct: 400 ISAASFSHLPLVLRFVKHLSPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVN 459
Query: 344 TFLPKESRQRLDYEADVGHKIENIISFEGFQRIERSESGSKLSQRMKNAGFFSLPFCEET 403
L ++ Q+++ + +IE ++ + + IER GF + T
Sbjct: 460 ANL--DAMQKIERFL-IQPEIEKLV-LDRSRPIERPMM--TWQAMFLQMGFSPVTHSNFT 513
Query: 404 VKEVRSLLDEH-ASGWGMKREEEMLALTWKGHNSVFATAW 442
+ L+ G+ ++++ L L W+ V +AW
Sbjct: 514 ESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVSAW 553
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 123 (48.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 50/172 (29%), Positives = 81/172 (47%)
Query: 23 GQSSIPGALRGCLGSLDGACIEKL--LLHCASALESNDVTLAQQVMWVLNN-VASPVGDP 79
GQ+ G L S+D + + L+ +ES+++ LAQ V+ LN + SP G P
Sbjct: 100 GQNQTTGYGFNSLDSVDNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRP 159
Query: 80 NQRLTSSFLRALIS--RASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWHRFGFC 137
QR F AL S S P LS++ S +R+ ++ E +G + IP F
Sbjct: 160 LQRAAFYFKEALGSFLTGSNRNPIRLSSW---SEIVQRIRAIKEYSG-ISPIPL--FSHF 213
Query: 138 ASNSAIFKAIQGYSK---VHILDFSITHCMQWPTLIDALAKRPEGPPSLRIT 186
+N AI ++ S VH++DF I Q+ +L+ + ++ LR+T
Sbjct: 214 TANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFLRVT 265
Score = 55 (24.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 27/150 (18%), Positives = 62/150 (41%)
Query: 298 FLHLIKGLNPCIMIVVDED--SDLSAS-SLTSRIATCFNYLWIPFDALETFLPKESRQRL 354
F++ ++ ++P +++ VD + ++++ S S + + + ++L+ P +
Sbjct: 338 FVNNLRRVSPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKK 397
Query: 355 DYEADVGHKIENIISFEGFQRIERSESGSKL-SQRMKNAGFFSLPFCEETVKEVRSLLDE 413
EA V + IS +R +G + AG + + + LL++
Sbjct: 398 IVEAFV---LRPKISAAVETAADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEK 454
Query: 414 -HASGWGMKREEEMLALTWKGHNSVFATAW 442
G+ + + + L L W G V +AW
Sbjct: 455 AQVRGFHVAKRQGELVLCWHGRALVATSAW 484
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 50/178 (28%), Positives = 82/178 (46%)
Query: 57 NDVTLAQQVMWVLN-NVASPVGDPNQRLTSSFLRAL--ISRA--SKVCPTTLSNFNGSST 111
N+ LAQ ++ LN N+ + D N F RA I+ A S + ++LS S
Sbjct: 261 NNPVLAQGILARLNHNLNNNNDDTNNNPKPPFHRAASYITEALHSLLQDSSLSP-PSLSP 319
Query: 112 NHRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGYSKVHILDFSITHCMQWPTLID 171
+ + + + P+ +F +N I ++ +G+ ++HI+DF I + QW +LI
Sbjct: 320 PQNLIFRIAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQ 379
Query: 172 ALA---KRPEGPPSLRITVPYSRPPVPPLLNVSAEEVGLRLGNFAKFRDVPFEFKVID 226
LA R PSL+IT S V + E LR +FA V FE ++++
Sbjct: 380 ELAGKRNRSSSAPSLKITAFASPSTVSDEFELRFTEENLR--SFAGETGVSFEIELLN 435
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 115 (45.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 55/222 (24%), Positives = 95/222 (42%)
Query: 21 NTGQSSIPGALRGCLGSLDGACIEKLL----LHCASALESNDVT-LAQQVMWVLN---NV 72
+T + +P G G IE+L L + + D T LAQ ++ LN N
Sbjct: 247 STAVAMVPVPSPGMAGDDQSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNT 306
Query: 73 ASPVGDPNQRLTSSFLRALISRASKVCPTTLSNFNGSSTNHRRLMSVTELAGYVDLIPWH 132
+S P QR S AL+S L T ++ + + + P+
Sbjct: 307 SSNHKSPFQRAASHIAEALLSLIHNESSPPLI------TPENLILRIAAYRSFSETSPFL 360
Query: 133 RFGFCASNSAIFKAIQ--GYSKVHILDFSITHCMQWPTLIDALA-----KRPEGPPSLRI 185
+F +N +I ++ G+ ++HI+DF + + QW +L+ LA +R SL++
Sbjct: 361 QFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKL 420
Query: 186 TVPYSRPP--VPPLLNVSAEEVGLRLGNFAKFRDVPFEFKVI 225
TV ++ PP V + E L+ FA +PFE +++
Sbjct: 421 TV-FAPPPSTVSDEFELRFTEENLK--TFAGEVKIPFEIELL 459
Score = 60 (26.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 39/183 (21%), Positives = 69/183 (37%)
Query: 268 LVINCQNWLRYLYDDEGRGI--NAQDASLRDAFLHLI----KGLNPCIMIVVDEDSDLSA 321
L++N W L E I N S+ +L LI K L+P I++ D D +
Sbjct: 463 LLLNPAYWPLSLRSSEKEAIAVNLPVNSVASGYLPLILRFLKQLSPNIVVCSDRGCDRND 522
Query: 322 SSLTSRIATCFNYLWIPFDALETFLPKESRQRLDYEAD-VGHKIENIISFEGFQRIERSE 380
+ + + Y LE+ +++ E V IE ++ + + IERS
Sbjct: 523 APFPNAVIHSLQY---HTSLLESLDANQNQDDSSIERFWVQPSIEKLL-MKRHRWIERSP 578
Query: 381 SGSKLSQRMKNAGFFSLPFCEETVKEVRSLLDEH-ASGWGMKREEEMLALTWKGHNSVFA 439
L GF + + LL + G+ +++ + L + W+ V
Sbjct: 579 PWRIL---FTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTV 635
Query: 440 TAW 442
+AW
Sbjct: 636 SAW 638
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 449 432 0.00086 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 627 (67 KB)
Total size of DFA: 273 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.23u 0.16s 33.39t Elapsed: 00:00:02
Total cpu time: 33.23u 0.16s 33.39t Elapsed: 00:00:02
Start: Sat May 11 10:00:38 2013 End: Sat May 11 10:00:40 2013