Your job contains 1 sequence.
>041894
MTSTKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC
LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLV
DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASVHE
VLDKIPERNGNVELSSGLAGCNKFEKRVVSAGHDADLDA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041894
(219 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198546 - symbol:AT1G20230 "AT1G20230" species... 198 1.1e-14 1
TAIR|locus:2205200 - symbol:OTP82 "AT1G08070" species:370... 193 3.7e-14 1
TAIR|locus:2825379 - symbol:AT1G71490 "AT1G71490" species... 192 4.2e-14 1
TAIR|locus:2096414 - symbol:AT3G03580 species:3702 "Arabi... 193 4.8e-14 1
TAIR|locus:2181201 - symbol:AT5G27110 species:3702 "Arabi... 165 5.7e-14 2
TAIR|locus:2017744 - symbol:AT1G22830 species:3702 "Arabi... 190 7.2e-14 1
TAIR|locus:2095289 - symbol:AT3G09040 "AT3G09040" species... 192 7.7e-14 1
TAIR|locus:2025946 - symbol:CRR28 "CHLORORESPIRATORY REDU... 185 2.1e-13 1
TAIR|locus:2098901 - symbol:AT3G61170 species:3702 "Arabi... 186 2.3e-13 1
TAIR|locus:2183931 - symbol:AT5G13230 species:3702 "Arabi... 185 3.1e-13 1
TAIR|locus:2130389 - symbol:LOI1 "lovastatin insensitive ... 166 1.2e-12 2
TAIR|locus:2149664 - symbol:MEF1 "mitochondrial RNA editi... 172 4.6e-12 1
TAIR|locus:2122634 - symbol:OTP70 "AT4G25270" species:370... 170 6.3e-12 1
TAIR|locus:2122551 - symbol:AT4G39530 species:3702 "Arabi... 156 3.0e-11 2
TAIR|locus:2090857 - symbol:AT3G26630 "AT3G26630" species... 161 4.5e-11 1
TAIR|locus:2064828 - symbol:AT2G40720 species:3702 "Arabi... 163 7.5e-11 1
TAIR|locus:2091546 - symbol:AT3G13770 species:3702 "Arabi... 161 7.9e-11 1
TAIR|locus:2093920 - symbol:AT3G15930 "AT3G15930" species... 161 9.0e-11 1
TAIR|locus:2054131 - symbol:SLO2 "AT2G13600" species:3702... 158 1.1e-10 2
TAIR|locus:2027589 - symbol:PGN "AT1G56570" species:3702 ... 158 6.3e-10 1
TAIR|locus:2141171 - symbol:AT4G21300 species:3702 "Arabi... 158 1.0e-09 1
TAIR|locus:2162207 - symbol:CRR21 "chlororespiratory redu... 156 1.1e-09 2
TAIR|locus:2100392 - symbol:AT3G47840 species:3702 "Arabi... 157 1.5e-09 1
TAIR|locus:2155740 - symbol:AT5G65570 species:3702 "Arabi... 156 2.4e-09 1
TAIR|locus:2175653 - symbol:AT5G39350 "AT5G39350" species... 155 3.1e-09 1
TAIR|locus:2057574 - symbol:AT2G33760 species:3702 "Arabi... 154 4.0e-09 1
TAIR|locus:2205425 - symbol:AT1G68930 "AT1G68930" species... 153 8.0e-09 1
TAIR|locus:2083961 - symbol:AT3G53360 "AT3G53360" species... 153 8.3e-09 1
TAIR|locus:505006130 - symbol:AT1G18485 species:3702 "Ara... 153 1.1e-08 1
TAIR|locus:4010713895 - symbol:AT4G21065 "AT4G21065" spec... 151 1.2e-08 1
TAIR|locus:2151694 - symbol:AT5G37570 "AT5G37570" species... 150 1.5e-08 1
TAIR|locus:2007116 - symbol:AT1G69350 "AT1G69350" species... 151 1.8e-08 1
TAIR|locus:2124603 - symbol:AT4G18520 species:3702 "Arabi... 149 2.2e-08 2
TAIR|locus:2034491 - symbol:AT1G31790 "AT1G31790" species... 147 2.3e-08 1
TAIR|locus:2117084 - symbol:AT4G18840 "AT4G18840" species... 139 2.5e-08 2
TAIR|locus:2056794 - symbol:REME1 "required for efficienc... 149 2.6e-08 1
TAIR|locus:2039817 - symbol:AT2G39620 "AT2G39620" species... 150 2.7e-08 1
TAIR|locus:2089333 - symbol:AT3G16610 "AT3G16610" species... 149 2.8e-08 1
TAIR|locus:2013079 - symbol:AT1G19720 "AT1G19720" species... 150 2.9e-08 1
TAIR|locus:2088827 - symbol:AT3G26540 species:3702 "Arabi... 149 3.0e-08 1
TAIR|locus:2076456 - symbol:AT3G58590 "AT3G58590" species... 149 3.3e-08 1
TAIR|locus:2087969 - symbol:AT3G13880 species:3702 "Arabi... 149 3.3e-08 1
TAIR|locus:2131631 - symbol:AT4G35130 "AT4G35130" species... 149 3.7e-08 1
TAIR|locus:2089591 - symbol:AT3G14730 "AT3G14730" species... 148 3.7e-08 1
TAIR|locus:2103483 - symbol:OTP84 "ORGANELLE TRANSCRIPT P... 149 4.2e-08 1
TAIR|locus:2034456 - symbol:AT1G31920 species:3702 "Arabi... 147 4.5e-08 1
TAIR|locus:2040565 - symbol:AT2G36730 species:3702 "Arabi... 146 4.8e-08 1
TAIR|locus:2151501 - symbol:AT5G46460 species:3702 "Arabi... 147 5.5e-08 1
TAIR|locus:2012295 - symbol:AT1G09410 species:3702 "Arabi... 147 5.6e-08 1
TAIR|locus:2006927 - symbol:AT1G33350 species:3702 "Arabi... 143 1.3e-07 1
TAIR|locus:2168963 - symbol:AT5G47460 "AT5G47460" species... 143 1.5e-07 1
TAIR|locus:2057630 - symbol:AT2G33680 "AT2G33680" species... 144 1.5e-07 1
TAIR|locus:2198811 - symbol:MEF3 "AT1G06140" species:3702... 142 1.9e-07 1
TAIR|locus:2183886 - symbol:RARE1 "REQUIRED FOR ACCD RNA ... 143 2.2e-07 1
TAIR|locus:2154855 - symbol:AT5G66520 "AT5G66520" species... 142 2.2e-07 1
TAIR|locus:2196583 - symbol:ECB2 "EARLY CHLOROPLAST BIOGE... 143 2.6e-07 1
TAIR|locus:2148101 - symbol:AT5G16860 "AT5G16860" species... 142 3.4e-07 1
TAIR|locus:2195296 - symbol:AT1G09190 "AT1G09190" species... 139 3.6e-07 1
TAIR|locus:2063771 - symbol:AT2G03380 species:3702 "Arabi... 140 4.7e-07 1
TAIR|locus:2011892 - symbol:AT1G50270 "AT1G50270" species... 139 5.0e-07 1
TAIR|locus:2115130 - symbol:AT4G37170 "AT4G37170" species... 139 6.2e-07 1
TAIR|locus:2010652 - symbol:AT1G04840 "AT1G04840" species... 137 7.4e-07 2
TAIR|locus:2054789 - symbol:MEF21 "mitochondrial editing ... 137 7.7e-07 1
TAIR|locus:2028850 - symbol:AT1G23450 species:3702 "Arabi... 138 7.8e-07 1
TAIR|locus:2078653 - symbol:AT3G02010 species:3702 "Arabi... 139 7.9e-07 1
TAIR|locus:2134842 - symbol:AT4G04370 species:3702 "Arabi... 138 8.8e-07 1
TAIR|locus:2130644 - symbol:AT4G15720 "AT4G15720" species... 137 9.5e-07 1
TAIR|locus:2057986 - symbol:AT2G36980 species:3702 "Arabi... 137 9.7e-07 1
TAIR|locus:2119440 - symbol:AT4G13650 species:3702 "Arabi... 139 1.1e-06 1
TAIR|locus:2118964 - symbol:EMB2758 "embryo defective 275... 137 1.4e-06 1
TAIR|locus:2130354 - symbol:AT4G14820 "AT4G14820" species... 134 1.5e-06 2
TAIR|locus:2027554 - symbol:AT1G56690 species:3702 "Arabi... 136 1.5e-06 1
TAIR|locus:2018668 - symbol:AT1G28690 species:3702 "Arabi... 134 1.7e-06 1
TAIR|locus:2125899 - symbol:AT4G33170 species:3702 "Arabi... 137 1.8e-06 1
TAIR|locus:2049562 - symbol:AT2G01510 "AT2G01510" species... 134 2.1e-06 1
TAIR|locus:2177537 - symbol:EMB3141 "AT5G50390" species:3... 134 2.2e-06 2
TAIR|locus:2056740 - symbol:OTP85 "ORGANELLE TRANSCRIPT P... 134 2.2e-06 1
TAIR|locus:2059687 - symbol:AT2G17210 species:3702 "Arabi... 135 2.2e-06 1
TAIR|locus:2102852 - symbol:CRR2 "AT3G46790" species:3702... 134 2.5e-06 1
TAIR|locus:2090444 - symbol:AT3G22150 "AT3G22150" species... 135 2.5e-06 1
TAIR|locus:2206164 - symbol:AT1G31430 species:3702 "Arabi... 132 3.6e-06 1
TAIR|locus:2150690 - symbol:EMB175 "AT5G03800" species:37... 134 3.7e-06 1
TAIR|locus:2096299 - symbol:AT3G05340 "AT3G05340" species... 132 4.4e-06 1
TAIR|locus:2077878 - symbol:AT3G08820 "AT3G08820" species... 132 4.6e-06 1
TAIR|locus:2019130 - symbol:OTP87 "organelle transcript p... 133 4.8e-06 1
TAIR|locus:2007888 - symbol:AT1G17630 species:3702 "Arabi... 132 5.0e-06 1
TAIR|locus:2144143 - symbol:AT5G06540 species:3702 "Arabi... 131 5.3e-06 1
TAIR|locus:2060640 - symbol:OTP81 "ORGANELLE TRANSCRIPT P... 131 6.7e-06 1
TAIR|locus:2178188 - symbol:MEF7 "AT5G09950" species:3702... 132 7.4e-06 1
TAIR|locus:2176927 - symbol:AT5G52850 species:3702 "Arabi... 131 8.5e-06 1
TAIR|locus:2014270 - symbol:AT1G64310 species:3702 "Arabi... 128 1.0e-05 1
TAIR|locus:2045580 - symbol:AT2G42920 species:3702 "Arabi... 128 1.0e-05 1
TAIR|locus:2020703 - symbol:AT1G03540 species:3702 "Arabi... 127 1.5e-05 1
TAIR|locus:2049726 - symbol:AT2G37310 species:3702 "Arabi... 127 1.7e-05 1
TAIR|locus:2080727 - symbol:MEF10 "mitochondrial RNA edit... 126 2.1e-05 1
TAIR|locus:2154965 - symbol:AT5G66500 "AT5G66500" species... 125 2.2e-05 1
TAIR|locus:2062939 - symbol:AT2G46050 species:3702 "Arabi... 116 2.6e-05 2
TAIR|locus:2126352 - symbol:AT4G37380 species:3702 "Arabi... 125 2.8e-05 1
TAIR|locus:2148393 - symbol:AT5G59600 "AT5G59600" species... 124 2.9e-05 1
TAIR|locus:2098670 - symbol:AT3G50420 species:3702 "Arabi... 126 2.9e-05 1
WARNING: Descriptions of 32 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2198546 [details] [associations]
symbol:AT1G20230 "AT1G20230" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022472 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00518181 PIR:A86336 RefSeq:NP_173449.1 UniGene:At.41719
ProteinModelPortal:Q9LNU6 SMR:Q9LNU6 PRIDE:Q9LNU6
EnsemblPlants:AT1G20230.1 GeneID:838612 KEGG:ath:AT1G20230
GeneFarm:3206 TAIR:At1g20230 eggNOG:NOG298463 InParanoid:Q9LNU6
OMA:CHAVIKF PhylomeDB:Q9LNU6 ProtClustDB:CLSN2682959
Genevestigator:Q9LNU6 Uniprot:Q9LNU6
Length = 760
Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPV-AWKSIIR 79
S+ Q HA+I K+ N ++ ++L+ Y+N+N +D+ +L ++ P P + ++ S+I
Sbjct: 32 SKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI--PDPTIYSFSSLIY 89
Query: 80 CCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL 139
T+ L +S+ F RM G+ PD +V P++ K C L F+ G+ +H G+D+
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 140 DLYTNNALMNMYAQSQNM-DMH-IYDR 164
D + ++ +MY + M D ++DR
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDR 176
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W SII C QNG +E+L F M +GV P+H PS+L +C + G S H
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 132 IIRLGVDLDLYTNNALMNMYAQSQNMDM 159
+R+ + +++ +AL++MYA+ +++
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINL 441
>TAIR|locus:2205200 [details] [associations]
symbol:OTP82 "AT1G08070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0031425 "chloroplast RNA
processing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC026875
GO:GO:0031425 Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197
HOGENOM:HOG000237569 IPI:IPI00516672 RefSeq:NP_172286.1
UniGene:At.43030 ProteinModelPortal:Q9LN01 SMR:Q9LN01
EnsemblPlants:AT1G08070.1 GeneID:837325 KEGG:ath:AT1G08070
GeneFarm:3172 TAIR:At1g08070 InParanoid:Q9LN01 OMA:EEWKEGA
PhylomeDB:Q9LN01 ProtClustDB:CLSN2682772 Genevestigator:Q9LN01
Uniprot:Q9LN01
Length = 741
Score = 193 (73.0 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 48/162 (29%), Positives = 89/162 (54%)
Query: 8 INLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLL---FIYNNFNLVHDSLCLLDT 64
++LL N KT + +HAQ+ K N+ + +S+L+ + +F + ++ + T
Sbjct: 37 LSLLHN---CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
++ P + W ++ R + V +L +V MI G+ P+ FP VLKSC F+
Sbjct: 94 IQEPNLLI-WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNM-DMH-IYDR 164
G+ +H +++LG DLDLY + +L++MY Q+ + D H ++D+
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK 194
>TAIR|locus:2825379 [details] [associations]
symbol:AT1G71490 "AT1G71490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC016163 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AK117951 EMBL:BT020313 EMBL:BT020458 IPI:IPI00531417
IPI:IPI00896803 RefSeq:NP_177305.1 UniGene:At.43507
UniGene:At.71175 UniGene:At.75242 ProteinModelPortal:Q9C9I6
SMR:Q9C9I6 PRIDE:Q9C9I6 EnsemblPlants:AT1G71490.1 GeneID:843490
KEGG:ath:AT1G71490 GeneFarm:4225 TAIR:At1g71490 eggNOG:NOG288602
HOGENOM:HOG000115617 InParanoid:Q9C9I6 OMA:YYVLIAN PhylomeDB:Q9C9I6
ProtClustDB:CLSN2679260 Genevestigator:Q9C9I6 Uniprot:Q9C9I6
Length = 681
Score = 192 (72.6 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 48/159 (30%), Positives = 82/159 (51%)
Query: 9 NLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKT 67
+LL V ++ Q+HA + +E +S L+ +L+ Y+ FNL +++ +++
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHS-VLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 68 PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGES 127
P+ W +I +N L E + + RM+ G+ PD +PSVLK+C +D FG
Sbjct: 107 -LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 128 VHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDR 164
VH I LY NAL++MY + +NM + ++DR
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDR 204
>TAIR|locus:2096414 [details] [associations]
symbol:AT3G03580 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009327 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BT004278 EMBL:BT006153 IPI:IPI00535817 RefSeq:NP_187008.1
UniGene:At.40958 ProteinModelPortal:Q9SS60 SMR:Q9SS60 PaxDb:Q9SS60
PRIDE:Q9SS60 EnsemblPlants:AT3G03580.1 GeneID:821229
KEGG:ath:AT3G03580 GeneFarm:3232 TAIR:At3g03580 eggNOG:NOG261100
InParanoid:Q9SS60 OMA:YTFPSVI PhylomeDB:Q9SS60
ProtClustDB:CLSN2684094 Genevestigator:Q9SS60 Uniprot:Q9SS60
Length = 882
Score = 193 (73.0 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 45/134 (33%), Positives = 77/134 (57%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPV-AWKSIIR 79
++ +++HA + +S F +L+ Y++F SL + + +PA V W SIIR
Sbjct: 21 NELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV-SPAKNVYLWNSIIR 79
Query: 80 CCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL 139
++NGL E+L + ++ S V PD FPSV+K+C L D G+ V+ I+ +G +
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 140 DLYTNNALMNMYAQ 153
DL+ NAL++MY++
Sbjct: 140 DLFVGNALVDMYSR 153
Score = 147 (56.8 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 45 LLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYP 104
L+ +Y V DSL + ++ T V W ++I C + G L +M S V P
Sbjct: 449 LIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP 507
Query: 105 DHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
D F L C L R G+ +H C++R G + +L NAL+ MY++
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556
Score = 133 (51.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W SII Q+G L+E++ F M+ DH + ++ T L D +FG+ +H+
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
I+ G+ +DL +NAL++MYA+
Sbjct: 434 GIKSGICIDLSVSNALIDMYAK 455
>TAIR|locus:2181201 [details] [associations]
symbol:AT5G27110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 EMBL:AF007271 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00518722 PIR:T01808
RefSeq:NP_198063.1 UniGene:At.65555 UniGene:At.74336
ProteinModelPortal:O04659 SMR:O04659 STRING:O04659 PaxDb:O04659
PRIDE:O04659 EnsemblPlants:AT5G27110.1 GeneID:832769
KEGG:ath:AT5G27110 GeneFarm:4221 TAIR:At5g27110 eggNOG:NOG251542
OMA:SILMACS PhylomeDB:O04659 ProtClustDB:CLSN2686965
Genevestigator:O04659 Uniprot:O04659
Length = 691
Score = 165 (63.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T N++K ++ + + +H + K+ + S L+ +Y FNL +SL + D +
Sbjct: 109 TFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEM 168
Query: 66 KTPAPPVA-WKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
P VA W ++I C Q+G ++L F RM SG P+ + +C+ L+
Sbjct: 169 --PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM 159
G+ +H ++ G +LD Y N+AL++MY + +++
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV 261
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPP-VAWKSIIRC 80
+ K++H + K ++ S L+ +Y + + + + K P VAW S+I+
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ--KMPRKSLVAWNSMIKG 283
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
G + RMI G P S+L +C+ + G+ +H +IR V+ D
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 141 LYTNNALMNMY 151
+Y N +L+++Y
Sbjct: 344 IYVNCSLIDLY 354
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 1 MTSTKTLINLLKNPV-SIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSL 59
M S+K L++LL+ S K+ + K +H +I L L+ +Y +
Sbjct: 1 MESSK-LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSAR 59
Query: 60 CLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGV-YPDHNVFPSVLKSCTL 118
+ + + W S++ ++N + ++L F R++ + PD FP+V+K+
Sbjct: 60 HVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA 119
Query: 119 LVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
L G +H +++ G D+ ++L+ MYA+
Sbjct: 120 LGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
Score = 50 (22.7 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 173 GREASVHEVLDKIPERNGNVELSSGL-AGC 201
GR +E++ + PE + N EL S L + C
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSAC 590
>TAIR|locus:2017744 [details] [associations]
symbol:AT1G22830 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AF000657 EMBL:AC003979 HOGENOM:HOG000115617
ProtClustDB:CLSN2679260 EMBL:AK176394 EMBL:BT023467 IPI:IPI00538128
PIR:B86362 PIR:T00762 RefSeq:NP_001077582.1 RefSeq:NP_173696.1
UniGene:At.41583 ProteinModelPortal:Q4V389 SMR:Q4V389 PRIDE:Q4V389
EnsemblPlants:AT1G22830.1 EnsemblPlants:AT1G22830.2 GeneID:838888
KEGG:ath:AT1G22830 GeneFarm:3637 TAIR:At1g22830 eggNOG:NOG314509
InParanoid:Q4V389 OMA:HEFALME PhylomeDB:Q4V389
Genevestigator:Q4V389 Uniprot:Q4V389
Length = 703
Score = 190 (71.9 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 48/159 (30%), Positives = 83/159 (52%)
Query: 9 NLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKT 67
+LL V +QLHA + LE +S L+ +L+ Y+ FNL+ ++ + + +
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDS-VLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 68 PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGES 127
P+ W +I +N ES++ + RM+ G+ D +PSV+K+C L+DF +G
Sbjct: 147 -LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 128 VHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDR 164
VH I +LY NAL++MY + +D+ ++DR
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR 244
>TAIR|locus:2095289 [details] [associations]
symbol:AT3G09040 "AT3G09040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00542229
RefSeq:NP_187516.1 UniGene:At.40178 ProteinModelPortal:Q9SS83
SMR:Q9SS83 PRIDE:Q9SS83 EnsemblPlants:AT3G09040.1 GeneID:820057
KEGG:ath:AT3G09040 GeneFarm:3706 TAIR:At3g09040 eggNOG:NOG256475
InParanoid:Q9SS83 OMA:CRIHGDD PhylomeDB:Q9SS83
ProtClustDB:CLSN2684968 Genevestigator:Q9SS83 Uniprot:Q9SS83
Length = 1028
Score = 192 (72.6 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 49/164 (29%), Positives = 79/164 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T++ P S+ + Q H QI K +L LL +Y N + ++ L
Sbjct: 634 TIVEACHKPESL---TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSE 690
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
L +P V W ++ +QNG E+L + M GV PD F +VL+ C++L R
Sbjct: 691 LSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLRE 750
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNM--DMHIYDRFQ 166
G ++H+ I L DLD T+N L++MYA+ +M ++D +
Sbjct: 751 GRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T +LL + Q H+ I K + F+ + L+ +Y + D+ + + +
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V W +II Q+ E+ F RM G+ D S LK+CT + G
Sbjct: 490 -CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQ 153
+ VH ++ G+D DL+T ++L++MY++
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSK 576
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/141 (25%), Positives = 69/141 (48%)
Query: 26 LHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNG 85
+HA+ K ++ ++ S L+ +Y+ + + + + L+ V W ++IR NG
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNG 407
Query: 86 LLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNN 145
+ + F+ M SG D F S+L +C D G H+ II+ + +L+ N
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 146 ALMNMYAQSQNMD--MHIYDR 164
AL++MYA+ ++ I++R
Sbjct: 468 ALVDMYAKCGALEDARQIFER 488
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 73 AWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACI 132
AW S++ + G + L FV + + ++P+ F VL +C + FG +H +
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 133 IRLGVDLDLYTNNALMNMYAQ 153
I++G++ + Y AL++MYA+
Sbjct: 187 IKMGLERNSYCGGALVDMYAK 207
>TAIR|locus:2025946 [details] [associations]
symbol:CRR28 "CHLORORESPIRATORY REDUCTION28" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
GO:GO:0016556 EMBL:AC007258 Gene3D:1.25.40.10 PROSITE:PS51375
GO:GO:0004519 EMBL:AC009317 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK228565 IPI:IPI00526140
PIR:H96620 RefSeq:NP_176180.1 UniGene:At.11368 UniGene:At.66916
ProteinModelPortal:Q0WQW5 SMR:Q0WQW5 STRING:Q0WQW5 PaxDb:Q0WQW5
PRIDE:Q0WQW5 EnsemblPlants:AT1G59720.1 GeneID:842263
KEGG:ath:AT1G59720 GeneFarm:3437 TAIR:At1g59720 eggNOG:NOG287891
InParanoid:Q0WQW5 OMA:LLDACCK PhylomeDB:Q0WQW5
ProtClustDB:CLSN2679697 ArrayExpress:Q0WQW5 Genevestigator:Q0WQW5
Uniprot:Q0WQW5
Length = 638
Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 44/144 (30%), Positives = 78/144 (54%)
Query: 21 SQAKQLHAQIFKTL---EPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSI 77
SQ KQLHA +T EP + FL ++L + ++F+ V+ + + D+++ + W ++
Sbjct: 62 SQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSS-FMWNTL 120
Query: 78 IRCCTQN-GLLVESLTCFVRMIGSGVY-PDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
IR C + E+ + +M+ G PD + FP VLK+C + F G+ VH I++
Sbjct: 121 IRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 136 GVDLDLYTNNALMNMYAQSQNMDM 159
G D+Y NN L+++Y +D+
Sbjct: 181 GFGGDVYVNNGLIHLYGSCGCLDL 204
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00097
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRC 80
S+ KQ+H QI K ++ + L+ +Y + + + + D + + V+W S+I
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL-VSWNSMIDA 226
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIR---LGV 137
+ G +L F M S PD SVL +C L G HA ++R + V
Sbjct: 227 LVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 138 DLDLYTNNALMNMYAQSQNMDMHIYDRFQG 167
+D+ N+L+ MY + ++ M FQG
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRM-AEQVFQG 314
>TAIR|locus:2098901 [details] [associations]
symbol:AT3G61170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL137898 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
UniGene:At.172 IPI:IPI00530191 PIR:T47909 RefSeq:NP_191676.1
UniGene:At.54031 ProteinModelPortal:Q9M2E7 SMR:Q9M2E7 PRIDE:Q9M2E7
EnsemblPlants:AT3G61170.1 GeneID:825289 KEGG:ath:AT3G61170
TAIR:At3g61170 InParanoid:Q9M2E7 OMA:NSMIVGC PhylomeDB:Q9M2E7
ProtClustDB:CLSN2685238 Genevestigator:Q9M2E7 Uniprot:Q9M2E7
Length = 783
Score = 186 (70.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 44/156 (28%), Positives = 82/156 (52%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKT---LEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
TL ++L+ S+ + +Q+H KT L+ N +++ LL +Y + ++ L
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN---VVNGLLAMYAQCKRISEAEYLF 183
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
+T++ V W S++ +QNG +++ CF + G + FPSVL +C +
Sbjct: 184 ETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
R G VH CI++ G ++Y +AL++MYA+ + M+
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREME 279
Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 47/167 (28%), Positives = 78/167 (46%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
TK NLL +S KS Q+F + F + ++ Y+N + D+ L
Sbjct: 27 TKLHSNLLLGDLS---KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFR 83
Query: 64 TLKTPAP-PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
+ P ++W ++I ++G VE+ F M G+ P+ SVL+ CT LV
Sbjct: 84 S--NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLL 141
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDRFQG 167
GE +H I+ G DLD+ N L+ MYAQ + + ++++ +G
Sbjct: 142 LRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Score = 141 (54.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T ++L S+ Q+H I K+ + ++ S L+ +Y + + LL+ +
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLL--VDFR 123
+ V+W S+I C + GL+ E+L+ F RM + D PS+L +C L + +
Sbjct: 289 EVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMK 346
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
S H I++ G NNAL++MYA+ MD
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMD 381
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 23 AKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCT 82
A H I KT + + + L+ +Y ++ +L + + + ++W +++ T
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNT 406
Query: 83 QNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLY 142
NG E+L F M G+ PD V SVL + L FG+ VH I+ G L
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS 466
Query: 143 TNNALMNMYAQSQNMD 158
NN+L+ MY + +++
Sbjct: 467 VNNSLVTMYTKCGSLE 482
>TAIR|locus:2183931 [details] [associations]
symbol:AT5G13230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL163491 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546460 PIR:T48570 RefSeq:NP_196827.1
UniGene:At.54832 ProteinModelPortal:Q9LYV3 SMR:Q9LYV3 PaxDb:Q9LYV3
PRIDE:Q9LYV3 EnsemblPlants:AT5G13230.1 GeneID:831163
KEGG:ath:AT5G13230 GeneFarm:3537 TAIR:At5g13230 eggNOG:NOG313696
InParanoid:Q9LYV3 OMA:INGMLEW PhylomeDB:Q9LYV3
ProtClustDB:CLSN2687006 Genevestigator:Q9LYV3 Uniprot:Q9LYV3
Length = 822
Score = 185 (70.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 51/163 (31%), Positives = 83/163 (50%)
Query: 1 MTSTKTLINLLKNPVSIKTKSQAKQLHAQIFKT---LEPNSRFLISRLLFIYNNFNLVHD 57
M + T LK + + AK +H QI KT L+P R + LL +Y + D
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP--RVGVG-LLQLYTQLGDMSD 300
Query: 58 SLCLLDTL-KTPAPPVAWKSII-RCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKS 115
+ + + + K P W +I R C QNG E++ F+RM + V P+ S+L
Sbjct: 301 AFKVFNEMPKNDVVP--WSFMIARFC-QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 116 CTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
C + GE +H ++++G DLD+Y +NAL+++YA+ + MD
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 38/149 (25%), Positives = 65/149 (43%)
Query: 9 NLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTP 68
+ LK VS+ LH+ I K ++ F+ + L+ Y+ V + + + +
Sbjct: 151 SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK 210
Query: 69 APPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESV 128
V W I+ C +NG +SL M +G P++ F + LK+ L F F + V
Sbjct: 211 -DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 129 HACIIRLGVDLDLYTNNALMNMYAQSQNM 157
H I++ LD L+ +Y Q +M
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
>TAIR|locus:2130389 [details] [associations]
symbol:LOI1 "lovastatin insensitive 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0016125 "sterol metabolic process"
evidence=IMP] [GO:0019287 "isopentenyl diphosphate biosynthetic
process, mevalonate pathway" evidence=IMP] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=IMP] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 GO:GO:0050790 GO:GO:0048364
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0016125 GO:GO:0034046
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0019288 GO:GO:0019287 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AK227954 EMBL:BT010464 IPI:IPI00542565 PIR:F71411
RefSeq:NP_193221.3 UniGene:At.33233 ProteinModelPortal:Q0WSH6
SMR:Q0WSH6 STRING:Q0WSH6 PRIDE:Q0WSH6 EnsemblPlants:AT4G14850.1
GeneID:827142 KEGG:ath:AT4G14850 GeneFarm:3145 TAIR:At4g14850
eggNOG:NOG292234 InParanoid:Q0WSH6 OMA:CSAFDMY PhylomeDB:Q0WSH6
ProtClustDB:CLSN2681604 Genevestigator:Q0WSH6 Uniprot:Q0WSH6
Length = 684
Score = 166 (63.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/160 (30%), Positives = 77/160 (48%)
Query: 1 MTSTKTLINLLKNPVSIKTKSQAKQLHAQIFKTLE-PNSRFLISRLLFIYNNFNLVHDSL 59
+ S L LLKN +S + + +HA+I KTL+ P FL + L+ +Y+ + H
Sbjct: 3 LLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLD--HPES 60
Query: 60 CLLDTLKTPAPPV-AWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTL 118
L TPA V +W S+I QNG +L F M GV P+ FP K+
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 119 LVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
L G+ +HA ++ G LD++ + +MY +++ D
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Score = 36 (17.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 180 EVLDKIPERN 189
++ D+IPERN
Sbjct: 164 KLFDEIPERN 173
>TAIR|locus:2149664 [details] [associations]
symbol:MEF1 "mitochondrial RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016554 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AB025606 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00534535
RefSeq:NP_200075.1 UniGene:At.55507 ProteinModelPortal:Q9LTF4
SMR:Q9LTF4 STRING:Q9LTF4 EnsemblPlants:AT5G52630.1 GeneID:835340
KEGG:ath:AT5G52630 GeneFarm:3327 TAIR:At5g52630 eggNOG:NOG282491
InParanoid:Q9LTF4 OMA:NLGIWNA ProtClustDB:CLSN2686108
Genevestigator:Q9LTF4 Uniprot:Q9LTF4
Length = 588
Score = 172 (65.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 44/140 (31%), Positives = 68/140 (48%)
Query: 16 SIKTKSQAK--QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVA 73
S +T+S K QLH + K+ + + L+ Y+ L DS + +
Sbjct: 25 SARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS-TT 83
Query: 74 WKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACII 133
W SII C QN L SL +M+ + PD +V PS KSC +L G SVH +
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143
Query: 134 RLGVDLDLYTNNALMNMYAQ 153
+ G D D++ ++L++MYA+
Sbjct: 144 KTGYDADVFVGSSLVDMYAK 163
>TAIR|locus:2122634 [details] [associations]
symbol:OTP70 "AT4G25270" species:3702 "Arabidopsis
thaliana" [GO:0008380 "RNA splicing" evidence=IMP] [GO:0009451 "RNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380
EMBL:AL161563 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035396 Pfam:PF13041 IPI:IPI00521833
PIR:T05548 RefSeq:NP_194257.1 UniGene:At.32276
ProteinModelPortal:Q9SB36 SMR:Q9SB36 EnsemblPlants:AT4G25270.1
GeneID:828630 KEGG:ath:AT4G25270 GeneFarm:4021 TAIR:At4g25270
eggNOG:NOG269307 HOGENOM:HOG000006216 InParanoid:Q9SB36 OMA:EHNFELL
PhylomeDB:Q9SB36 ProtClustDB:CLSN2685667 Genevestigator:Q9SB36
Uniprot:Q9SB36
Length = 527
Score = 170 (64.9 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 42/154 (27%), Positives = 78/154 (50%)
Query: 1 MTSTKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC 60
+T + +LL+ S++ ++H I L N+ + S+L+ +Y + +
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 61 LLDTL-KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLL 119
+ D + K + P AW S+I + G +++ + +M GV PD FP VLK+C +
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 120 VDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
+ GE++H +++ G D+Y NAL+ MYA+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Score = 120 (47.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W S++ +GLL E+L F M+ +G+ PD SVL ++ F+ G +H
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR---VLSFKHGRQLHGW 318
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
+IR G++ +L NAL+ +Y++
Sbjct: 319 VIRRGMEWELSVANALIVLYSK 340
>TAIR|locus:2122551 [details] [associations]
symbol:AT4G39530 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161595 EMBL:AL078620
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00521091 PIR:T09369 RefSeq:NP_195663.1 UniGene:At.65474
ProteinModelPortal:Q9SVA5 SMR:Q9SVA5 PRIDE:Q9SVA5
EnsemblPlants:AT4G39530.1 GeneID:830107 KEGG:ath:AT4G39530
GeneFarm:4025 TAIR:At4g39530 eggNOG:NOG291774 InParanoid:Q9SVA5
OMA:VHAYTIK PhylomeDB:Q9SVA5 ProtClustDB:CLSN2685697
Genevestigator:Q9SVA5 Uniprot:Q9SVA5
Length = 834
Score = 156 (60.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S T ++LL+ S+ + +KQ+H +FK F S L+ +Y+N + DS +
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
D +K V W S+ Q E+L F+ + S PD F +++ + L
Sbjct: 513 DEMKVK-DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
+ G+ H +++ G++ + Y NAL++MYA+
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAK 602
Score = 133 (51.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 24 KQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCT 82
KQ+HA I + LE ++ L++ L+ Y V + L + + ++W +++
Sbjct: 269 KQIHAHILRYGLEMDAS-LMNVLIDSYVKCGRVIAAHKLFNGMPNKNI-ISWTTLLSGYK 326
Query: 83 QNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLY 142
QN L E++ F M G+ PD S+L SC L FG VHA I+ + D Y
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 143 TNNALMNMYAQ 153
N+L++MYA+
Sbjct: 387 VTNSLIDMYAK 397
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V W ++I C + G SL F +++ V PD + +VL +C++L G+ +HA
Sbjct: 215 VTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
I+R G+++D N L++ Y +
Sbjct: 275 ILRYGLEMDASLMNVLIDSYVK 296
Score = 51 (23.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 173 GREASVHEVLDKIPERNGNVELSSGLAGCNKFEKRVVSAGHDADL 217
GR E+++K+P + + S L+GC K V A H A++
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAK-AGNVELAEHAAEM 748
>TAIR|locus:2090857 [details] [associations]
symbol:AT3G26630 "AT3G26630" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:X98130 EMBL:AB026648
Pfam:PF13041 EMBL:X97487 EMBL:AY099658 EMBL:BT000240
IPI:IPI00546010 RefSeq:NP_189297.1 UniGene:At.84
ProteinModelPortal:Q38959 SMR:Q38959 PaxDb:Q38959 PRIDE:Q38959
EnsemblPlants:AT3G26630.1 GeneID:822275 KEGG:ath:AT3G26630
GeneFarm:592 TAIR:At3g26630 eggNOG:NOG276835 HOGENOM:HOG000115630
InParanoid:Q38959 OMA:SIVSWTT PhylomeDB:Q38959
ProtClustDB:CLSN2684869 Genevestigator:Q38959 Uniprot:Q38959
Length = 455
Score = 161 (61.7 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRC 80
SQ KQ+H +I K N + L+ +L+ + ++F + + + L++P+ W +IR
Sbjct: 34 SQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST-FTWNLMIRS 92
Query: 81 CTQNGLLVESLTCFV-RMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL 139
+ N E+L F+ MI D FP V+K+C R G VH I+ G
Sbjct: 93 LSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFN 152
Query: 140 DLYTNNALMNMYAQSQNMDM--HIYDRFQG 167
D++ N LM++Y + D ++D+ G
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPG 182
>TAIR|locus:2064828 [details] [associations]
symbol:AT2G40720 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00544227 PIR:A84833 RefSeq:NP_181604.1
UniGene:At.42919 UniGene:At.42920 ProteinModelPortal:Q7XJN6
SMR:Q7XJN6 EnsemblPlants:AT2G40720.1 GeneID:818667
KEGG:ath:AT2G40720 GeneFarm:3676 TAIR:At2g40720 eggNOG:NOG275300
InParanoid:Q7XJN6 OMA:MYVKCGF PhylomeDB:Q7XJN6
ProtClustDB:CLSN2683637 Genevestigator:Q7XJN6 Uniprot:Q7XJN6
Length = 860
Score = 163 (62.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
Q+H + KT + F+ S L+ +Y+ L +L + ++ T VAW S+I C ++N
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM-VAWNSMISCYSRN 555
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
L S+ F M+ G++PD SVL + + G+S+H +RLG+ D +
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 145 NALMNMYAQ 153
NAL++MY +
Sbjct: 616 NALIDMYVK 624
Score = 151 (58.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 40/150 (26%), Positives = 77/150 (51%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
TL N++ + + K +HA++FK ++ + S LL +Y+ D+ + ++
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGS--GVYPDHNVFPSVLKSCTLLVDFR 123
+ VAW S+I +NG E+L F M + PD ++ SV +C L R
Sbjct: 435 EEK-DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
FG VH +I+ G+ L+++ ++L+++Y++
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Score = 122 (48.0 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 30/107 (28%), Positives = 58/107 (54%)
Query: 60 CLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVY-PDHNVFPSVLKSCTL 118
C+ D+ +PA + S IR Q G +++L + + GS + FPS+LK+C+
Sbjct: 16 CVADSYISPA---SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSA 72
Query: 119 LVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD--MHIYD 163
L + +G+++H ++ LG D + +L+NMY + +D + ++D
Sbjct: 73 LTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD 119
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 29/134 (21%), Positives = 62/134 (46%)
Query: 20 KSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIR 79
+ + KQ+H + + FL + L+ +Y F L D+ + ++ + V W +I
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 80 CCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL 139
+G+ SL ++ + V F L +C+ + FG +H ++++G+
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 140 DLYTNNALMNMYAQ 153
D Y +L++MY++
Sbjct: 306 DPYVCTSLLSMYSK 319
>TAIR|locus:2091546 [details] [associations]
symbol:AT3G13770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP001307 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00518949 RefSeq:NP_187990.1
UniGene:At.43032 UniGene:At.53299 ProteinModelPortal:Q9LIC3
SMR:Q9LIC3 EnsemblPlants:AT3G13770.1 GeneID:820586
KEGG:ath:AT3G13770 GeneFarm:3533 TAIR:At3g13770 eggNOG:NOG263023
InParanoid:Q9LIC3 OMA:NEFTFAT PhylomeDB:Q9LIC3
ProtClustDB:CLSN2684809 Genevestigator:Q9LIC3 Uniprot:Q9LIC3
Length = 628
Score = 161 (61.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 37/131 (28%), Positives = 69/131 (52%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+++HA + KT + +L +RLL Y + + D+ +LD + V+W ++I +Q
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV-VSWTAMISRYSQ 130
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
G E+LT F M+ S P+ F +VL SC G+ +H I++ D ++
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 144 NNALMNMYAQS 154
++L++MYA++
Sbjct: 191 GSSLLDMYAKA 201
>TAIR|locus:2093920 [details] [associations]
symbol:AT3G15930 "AT3G15930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 eggNOG:NOG235387 EMBL:AB026653 IPI:IPI00541778
RefSeq:NP_188214.1 UniGene:At.53331 ProteinModelPortal:Q9LSB8
SMR:Q9LSB8 EnsemblPlants:AT3G15930.1 GeneID:820836
KEGG:ath:AT3G15930 GeneFarm:3861 TAIR:At3g15930 InParanoid:Q9LSB8
OMA:DEFTMVS PhylomeDB:Q9LSB8 Genevestigator:Q9LSB8 Uniprot:Q9LSB8
Length = 687
Score = 161 (61.7 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 2 TSTKTLINLLKNPVSI----KTKSQAKQLHAQ-IFKTLEPNSRFLISRLLFIYNNFNLV- 55
T T+++ N +SI KT Q KQLH+Q I + + PN F + LF++ L
Sbjct: 25 TITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTF--QKKLFVFWCSRLGG 82
Query: 56 HDSLCLLDTLKTPAPPVA-WKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLK 114
H S +K P P V W ++I+ ++ E + ++ M+ GV PD + FP +L
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 115 SCTLLVD---FRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDMH--IYDR 164
L D G+ +H +++ G+ +LY NAL+ MY+ MDM ++DR
Sbjct: 143 G--LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
>TAIR|locus:2054131 [details] [associations]
symbol:SLO2 "AT2G13600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0010182 "sugar mediated
signaling pathway" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007063
GO:GO:0010182 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 GO:GO:0080156
IPI:IPI00529256 PIR:H84508 RefSeq:NP_178983.1 UniGene:At.52726
ProteinModelPortal:Q9SIT7 SMR:Q9SIT7 EnsemblPlants:AT2G13600.1
GeneID:815845 KEGG:ath:AT2G13600 GeneFarm:3687 TAIR:At2g13600
eggNOG:NOG311224 InParanoid:Q9SIT7 OMA:GFAQHDR PhylomeDB:Q9SIT7
ProtClustDB:CLSN2683340 Genevestigator:Q9SIT7 Uniprot:Q9SIT7
Length = 697
Score = 158 (60.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 40/130 (30%), Positives = 70/130 (53%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
Q+H+ I K+ + ++ S L+ +Y+ V+D+ + D + V+W S+I C QN
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD-RNVVSWNSLITCFEQN 231
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLG-VDLDLYT 143
G VE+L F M+ S V PD SV+ +C L + G+ VH +++ + D+
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 144 NNALMNMYAQ 153
+NA ++MYA+
Sbjct: 292 SNAFVDMYAK 301
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W ++I TQNG E+L+ F + V P H F ++LK+C L + G H
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 132 IIRLGVDL------DLYTNNALMNMYAQ 153
+++ G D++ N+L++MY +
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 157 MDMHIYDRFQGFGFNGGREASV 178
M H++ GF F G E +
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDI 427
>TAIR|locus:2027589 [details] [associations]
symbol:PGN "AT1G56570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009749 "response to glucose stimulus"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009737 GO:GO:0050832
GO:GO:0009651 GO:GO:0009749 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00545852 PIR:D96607 RefSeq:NP_176050.1
UniGene:At.52235 ProteinModelPortal:Q9FXA9 SMR:Q9FXA9
EnsemblPlants:AT1G56570.1 GeneID:842111 KEGG:ath:AT1G56570
GeneFarm:3622 TAIR:At1g56570 eggNOG:NOG305919 InParanoid:Q9FXA9
OMA:LMDMYAT PhylomeDB:Q9FXA9 ProtClustDB:CLSN2682898
Genevestigator:Q9FXA9 Uniprot:Q9FXA9
Length = 611
Score = 158 (60.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 41 LISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGS 100
L + L+ Y LV ++ L D + VAW ++I + + CF M+
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPD-RDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 101 GVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYA 152
G P+ SVLKSC + +G VH +++LG++ LY +NA+MNMYA
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Score = 113 (44.8 bits), Expect = 0.00070, P = 0.00070
Identities = 32/142 (22%), Positives = 68/142 (47%)
Query: 16 SIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWK 75
SI + + KQ+HA + K ++ +++ +L +Y + ++ ++ + W
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWN 283
Query: 76 SIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
++I ++ E+L F R G P+ F S++ +C + G+ +H I R
Sbjct: 284 TLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 136 GVDLDLYTNNALMNMYAQSQNM 157
G + ++ NAL++MYA+ N+
Sbjct: 343 GFNKNVELANALIDMYAKCGNI 364
>TAIR|locus:2141171 [details] [associations]
symbol:AT4G21300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161554 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL021960
EMBL:AL031187 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00535848 PIR:T05172 RefSeq:NP_193861.1
UniGene:At.66596 ProteinModelPortal:Q9STE1 SMR:Q9STE1 PRIDE:Q9STE1
EnsemblPlants:AT4G21300.1 GeneID:827878 KEGG:ath:AT4G21300
GeneFarm:3874 TAIR:At4g21300 eggNOG:NOG315457 InParanoid:Q9STE1
OMA:ISGYVLN PhylomeDB:Q9STE1 ProtClustDB:CLSN2685364
Genevestigator:Q9STE1 Uniprot:Q9STE1
Length = 857
Score = 158 (60.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
QLH + + + + LL +Y+ D+ L + + A V W +I Q+
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF-RMMSRADTVTWNCMISGYVQS 318
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
GL+ ESLT F MI SGV PD F S+L S + + + + +H I+R + LD++
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 145 NALMNMYAQSQNMDM 159
+AL++ Y + + + M
Sbjct: 379 SALIDAYFKCRGVSM 393
Score = 153 (58.9 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 43/163 (26%), Positives = 81/163 (49%)
Query: 7 LINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIY---NNFNLVHDSLCLLD 63
L+ NP ++ Q KQ+HA + + R+L +Y +F+ LD
Sbjct: 41 LLQACSNPNLLR---QGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 64 TLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFR 123
++ P W SII +NGLL ++L + +M+ GV PD + FP ++K+C L +F+
Sbjct: 98 LRRSSIRP--WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDR 164
+ + + LG+D + + ++L+ Y + +D+ ++DR
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198
>TAIR|locus:2162207 [details] [associations]
symbol:CRR21 "chlororespiratory reduction 21"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016556 "mRNA modification" evidence=RCA;IMP]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0016556 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009050 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00527368 RefSeq:NP_200385.1 UniGene:At.65685
ProteinModelPortal:Q9FM64 SMR:Q9FM64 STRING:Q9FM64 PRIDE:Q9FM64
EnsemblPlants:AT5G55740.1 GeneID:835668 KEGG:ath:AT5G55740
GeneFarm:4044 TAIR:At5g55740 eggNOG:NOG265492 HOGENOM:HOG000238049
InParanoid:Q9FM64 OMA:FYCKVGL PhylomeDB:Q9FM64
ProtClustDB:CLSN2687002 Genevestigator:Q9FM64 Uniprot:Q9FM64
Length = 830
Score = 156 (60.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 41/151 (27%), Positives = 80/151 (52%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSR--FLISRLLFIYNNFNLVHDSLCLLDTLKT 67
+L+ V + S KQ+HA+I K + +R ++ ++L+ Y + + + L L+
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135
Query: 68 PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGES 127
+W +II + GL +L FV M+ + ++PD+ V P+V K+C L RFG
Sbjct: 136 -RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRG 194
Query: 128 VHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
VH +++ G++ ++ ++L +MY + +D
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLD 225
Score = 36 (17.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 180 EVLDKIPERN 189
+V D+IP+RN
Sbjct: 229 KVFDEIPDRN 238
>TAIR|locus:2100392 [details] [associations]
symbol:AT3G47840 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL049746 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00525955 PIR:T07723 RefSeq:NP_190368.1 UniGene:At.53826
ProteinModelPortal:Q9STS9 SMR:Q9STS9 PaxDb:Q9STS9 PRIDE:Q9STS9
EnsemblPlants:AT3G47840.1 GeneID:823940 KEGG:ath:AT3G47840
GeneFarm:3701 TAIR:At3g47840 eggNOG:NOG249488 InParanoid:Q9STS9
OMA:IKEPGWS PhylomeDB:Q9STS9 ProtClustDB:CLSN2684004
Genevestigator:Q9STS9 Uniprot:Q9STS9
Length = 706
Score = 157 (60.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 1 MTSTKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC 60
++ T T LK ++ K +H + + + + L +Y + D LC
Sbjct: 206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC 265
Query: 61 LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLV 120
L + + + V+W S+I + G V+++ F++M S V P+ F S+ +C L
Sbjct: 266 LFENM-SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLS 324
Query: 121 DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
+GE +H ++ LG++ L +N++M MY+ N+
Sbjct: 325 RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNL 361
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T I+LL+ PV + ++ Q+ +PNS R L N + D
Sbjct: 17 TSISLLQKPV----EENIVRISNQVMVKFDPNSHL---RSLINAGNLRAARQ---VFD-- 64
Query: 66 KTP-APPVAWKSII-RCCTQNGLLVESLTCF--VRMIGSGVYPDHNVFPSVLKSCTLLVD 121
K P V+W SII R T N E+L F +R++ V PD +V VLK+C +
Sbjct: 65 KMPHGDIVSWTSIIKRYVTANNS-DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSN 123
Query: 122 FRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+GES+HA ++ + +Y ++L++MY + +D
Sbjct: 124 IAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 43/154 (27%), Positives = 63/154 (40%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
T L +LK + + LHA KT +S ++ S LL +Y + D C +
Sbjct: 108 TSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI-DKSCRVF 166
Query: 64 TLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFR 123
+ V W +II G E LT F M S D F LK+C L +
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
+G+++H +I G L N+L MY + M
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEM 260
>TAIR|locus:2155740 [details] [associations]
symbol:AT5G65570 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB026639 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00535497 RefSeq:NP_201360.1 UniGene:At.55704
ProteinModelPortal:Q9LSL8 SMR:Q9LSL8 PRIDE:Q9LSL8
EnsemblPlants:AT5G65570.1 GeneID:836683 KEGG:ath:AT5G65570
GeneFarm:3433 TAIR:At5g65570 eggNOG:NOG284207 InParanoid:Q9LSL8
OMA:KKNPAMS PhylomeDB:Q9LSL8 ProtClustDB:CLSN2686627
Genevestigator:Q9LSL8 Uniprot:Q9LSL8
Length = 738
Score = 156 (60.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 57/223 (25%), Positives = 100/223 (44%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T ++L + ++K K +H + K+ ++ + LL +Y +LV DSL + +
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
+ P V+W S+I QNG +L F +M+ + P+ S L+ C+ L F G
Sbjct: 329 EYPNQ-VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG 387
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDMH--IYDRFQ------------GFGFN 171
+H + + G D D Y + L+++Y + DM ++D + N
Sbjct: 388 RQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQN 447
Query: 172 G-GREA-SVHEVLDKIPERNGNVELSSGLAGCNKFEKRVVSAG 212
G GREA + E + + + +V + S L CN R+V G
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLACNN--SRLVEEG 488
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/154 (24%), Positives = 75/154 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHA-QIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
TL ++ K + + +A++ H + LE ++ F+ S L+ +Y F ++ +LD
Sbjct: 167 TLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDR 226
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
++ V ++I +Q G E++ F M+ V P+ + SVL SC L D
Sbjct: 227 VEEK-DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G+ +H +++ G + L + +L+ MY + +D
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
>TAIR|locus:2175653 [details] [associations]
symbol:AT5G39350 "AT5G39350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009054 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00525121 RefSeq:NP_198751.1
UniGene:At.55251 ProteinModelPortal:Q9FLZ9 SMR:Q9FLZ9
EnsemblPlants:AT5G39350.1 GeneID:833931 KEGG:ath:AT5G39350
GeneFarm:4040 TAIR:At5g39350 eggNOG:NOG328150 InParanoid:Q9FLZ9
OMA:LLAMYMN PhylomeDB:Q9FLZ9 ProtClustDB:CLSN2687317
Genevestigator:Q9FLZ9 Uniprot:Q9FLZ9
Length = 677
Score = 155 (59.6 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 42/154 (27%), Positives = 76/154 (49%)
Query: 17 IKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKS 76
+K+ +H +I ++ +++ + LL +Y NF V + + D +K ++W +
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN-RDVISWNT 188
Query: 77 IIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACII--R 134
+I +NG + ++L F M+ V DH S+L C L D G +VH + R
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 135 LGVDLDLYTNNALMNMYAQSQNMD--MHIYDRFQ 166
LG +++ NAL+NMY + MD ++DR +
Sbjct: 249 LGDKIEV--KNALVNMYLKCGRMDEARFVFDRME 280
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 1 MTSTKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC 60
++S K +LL + + ++ S+ K LH + T S ++S L Y + +
Sbjct: 12 LSSVKQYQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARK 70
Query: 61 LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGV--YPDHNVFPSVLKSCTL 118
L + + + +++ +IR + GL ++++ F+RM+ GV PD +P V K+
Sbjct: 71 LFEEMPQSSL-LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 119 LVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM 159
L + G VH I+R D Y NAL+ MY ++M
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
>TAIR|locus:2057574 [details] [associations]
symbol:AT2G33760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00521080 PIR:C84749 RefSeq:NP_180932.1 UniGene:At.66304
UniGene:At.68773 ProteinModelPortal:P93011 SMR:P93011
EnsemblPlants:AT2G33760.1 GeneID:817942 KEGG:ath:AT2G33760
GeneFarm:3149 TAIR:At2g33760 eggNOG:NOG259057 InParanoid:P93011
OMA:SPSNYTF PhylomeDB:P93011 ProtClustDB:CLSN2683510
Genevestigator:P93011 Uniprot:P93011
Length = 583
Score = 154 (59.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPP-VAWKSIIRC 80
Q +Q+HA + T SR L+++L+ + + + + L L P P + S+I+
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLF--LSVPLPDDFLFNSVIKS 81
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
++ L + + + RM+ S V P + F SV+KSC L R G+ VH + G LD
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 141 LYTNNALMNMYAQSQNMD--MHIYDR 164
Y AL+ Y++ +M+ ++DR
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDR 167
Score = 140 (54.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S T +++K+ + K +H + ++ + L+ Y+ + + +
Sbjct: 106 SNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVF 165
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
D + + VAW S++ QNGL E++ F +M SG PD F S+L +C
Sbjct: 166 DRMPEKSI-VAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAV 224
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDRFQ 166
G VH II G+DL++ AL+N+Y++ ++ ++D+ +
Sbjct: 225 SLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
>TAIR|locus:2205425 [details] [associations]
symbol:AT1G68930 "AT1G68930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011665 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00528975 PIR:H96713 RefSeq:NP_177059.1 UniGene:At.52442
ProteinModelPortal:Q9CAA8 SMR:Q9CAA8 EnsemblPlants:AT1G68930.1
GeneID:843226 KEGG:ath:AT1G68930 GeneFarm:3231 TAIR:At1g68930
eggNOG:NOG300864 HOGENOM:HOG000237570 InParanoid:Q9CAA8 OMA:EEGAQFH
PhylomeDB:Q9CAA8 ProtClustDB:CLSN2682344 Genevestigator:Q9CAA8
Uniprot:Q9CAA8
Length = 743
Score = 153 (58.9 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 29 QIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLV 88
++F L+ + + + L+ ++ D+L L ++ + V+W ++I+ QNGL
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS--VSWAAMIKGLAQNGLAK 252
Query: 89 ESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALM 148
E++ CF M G+ D F SVL +C L G+ +HACIIR +Y +AL+
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 149 NMYAQSQNMDMH--IYDRFQ 166
+MY + + + ++DR +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMK 332
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/138 (23%), Positives = 66/138 (47%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRC 80
++ KQ+HA I +T + ++ S L+ +Y +H + + D +K V+W +++
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV-VSWTAMVVG 345
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
Q G E++ F+ M SG+ PDH + +C + G H I G+
Sbjct: 346 YGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 141 LYTNNALMNMYAQSQNMD 158
+ +N+L+ +Y + ++D
Sbjct: 406 VTVSNSLVTLYGKCGDID 423
>TAIR|locus:2083961 [details] [associations]
symbol:AT3G53360 "AT3G53360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132966
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00530217 PIR:T45876
RefSeq:NP_190904.1 UniGene:At.53917 ProteinModelPortal:Q9LFI1
SMR:Q9LFI1 PRIDE:Q9LFI1 EnsemblPlants:AT3G53360.1 GeneID:824504
KEGG:ath:AT3G53360 GeneFarm:3704 TAIR:At3g53360 eggNOG:NOG266845
InParanoid:Q9LFI1 OMA:WNSILTA PhylomeDB:Q9LFI1
ProtClustDB:CLSN2684918 Genevestigator:Q9LFI1 Uniprot:Q9LFI1
Length = 768
Score = 153 (58.9 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 41/163 (25%), Positives = 78/163 (47%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S ++L+ P+++ SQ Q+H+ I K + + LL +Y + ++ L
Sbjct: 373 SLRSLLCAQTKPMAL---SQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
+ + A V+W +I+ C Q+ VE L F M+ S PDH ++L+ C +
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYD 163
+ G VH ++ G+ + + N L++MYA+ ++ I+D
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD 532
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/153 (25%), Positives = 76/153 (49%)
Query: 5 KTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
+T I+L+ S ++ +Q +++H I + L + +L +Y + D+ + D
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
+ V++ S+I +QNG E++ +++M+ + PD F S++K+C D
Sbjct: 128 MPE-RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
G+ +HA +I+L L NAL+ MY + M
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQM 219
Score = 147 (56.8 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 44/162 (27%), Positives = 80/162 (49%)
Query: 9 NLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISR-LLFIYNNFNLVHDSLCLLDTLKT 67
+++K S KQLHAQ+ K LE +S + L+ +Y FN + D+ + +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIK-LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM 231
Query: 68 PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVY-PDHNVFPSVLKSCTLLVDFRFGE 126
++W SII +Q G E+L+ M+ GV+ P+ +F S LK+C+ L+ +G
Sbjct: 232 K-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 127 SVHACIIRLGVDLDLYTNNALMNMYAQSQ--NMDMHIYDRFQ 166
+H I+ + + +L +MYA+ N ++D+ +
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Score = 114 (45.2 bits), Expect = 0.00072, P = 0.00072
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T+ NLL+ V I + Q+H KT L P +F+ + L+ +Y + + + D+
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPE-QFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCT 117
+ V+W ++I Q+G E+L F M +G+ P+H F VL +C+
Sbjct: 534 MDN-RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Score = 114 (45.2 bits), Expect = 0.00072, P = 0.00072
Identities = 43/184 (23%), Positives = 76/184 (41%)
Query: 11 LKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAP 70
LK S+ Q+H K+ + L +Y ++ + + D ++ P
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP-D 335
Query: 71 PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA 130
+W II NG E+++ F +M SG PD S+L + T + G +H+
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 131 CIIRLGVDLDLYTNNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASVHEVLDKIPERNG 190
II+ G DL N+L+ MY ++ ++ F+ F N S + +L +
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYC-CFNLFEDFR-NNADSVSWNTILTACLQHEQ 453
Query: 191 NVEL 194
VE+
Sbjct: 454 PVEM 457
>TAIR|locus:505006130 [details] [associations]
symbol:AT1G18485 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC013354 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229592 IPI:IPI00532648
PIR:E86318 RefSeq:NP_564054.1 UniGene:At.28671
ProteinModelPortal:Q0WN60 SMR:Q0WN60 PaxDb:Q0WN60 PRIDE:Q0WN60
EnsemblPlants:AT1G18485.1 GeneID:838429 KEGG:ath:AT1G18485
GeneFarm:3163 TAIR:At1g18485 eggNOG:NOG308609 OMA:CVIKACA
PhylomeDB:Q0WN60 ProtClustDB:CLSN2687856 ArrayExpress:Q0WN60
Genevestigator:Q0WN60 Uniprot:Q0WN60
Length = 970
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 37/136 (27%), Positives = 68/136 (50%)
Query: 18 KTKSQAKQLHAQIF-KTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKS 76
K +++H + T N L +R++ +Y DS + D L++ W +
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL-FQWNA 156
Query: 77 IIRCCTQNGLLVESLTCFVRMIGS-GVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
+I ++N L E L F+ MI + + PDH +P V+K+C + D G +VH +++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 136 GVDLDLYTNNALMNMY 151
G+ D++ NAL++ Y
Sbjct: 217 GLVEDVFVGNALVSFY 232
Score = 147 (56.8 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 26 LHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNG 85
+H + KT F+ + L+ Y V D+L L D + V+W S+IR + NG
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE-RNLVSWNSMIRVFSDNG 267
Query: 86 LLVESLTCFVRMI---GSGVY-PDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
ES M+ G G + PD +VL C + G+ VH ++L +D +L
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 142 YTNNALMNMYAQ 153
NNALM+MY++
Sbjct: 328 VLNNALMDMYSK 339
>TAIR|locus:4010713895 [details] [associations]
symbol:AT4G21065 "AT4G21065" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX826462 EMBL:BX827021
IPI:IPI00846696 IPI:IPI00921709 PIR:A85240 PIR:T10649
RefSeq:NP_001078414.1 RefSeq:NP_001078415.1 UniGene:At.49734
ProteinModelPortal:A8MQA3 SMR:A8MQA3 PRIDE:A8MQA3
EnsemblPlants:AT4G21065.1 GeneID:5008150 KEGG:ath:AT4G21065
GeneFarm:3325 TAIR:At4g21065 eggNOG:NOG242330 OMA:PDTHTYP
PhylomeDB:A8MQA3 ProtClustDB:CLSN2699103 Genevestigator:A8MQA3
Uniprot:A8MQA3
Length = 595
Score = 151 (58.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/151 (25%), Positives = 76/151 (50%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
T T L+K ++ + +H+ + ++ + ++ + LL +Y N V + + D
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 64 TLKTPAPP-VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
K P VAW S+I +NG E+L + M G+ PD S+L +C +
Sbjct: 181 --KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G+ VH +I++G+ +L+++N L+++YA+
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269
Score = 137 (53.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 27/89 (30%), Positives = 51/89 (57%)
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSG-VYPDHNVFPSVLKSCTLLVDFR 123
++ P W ++IR + G + + + + M SG V PD + +P ++K+ T + D R
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYA 152
GE++H+ +IR G +Y N+L+++YA
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYA 167
>TAIR|locus:2151694 [details] [associations]
symbol:AT5G37570 "AT5G37570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB018107 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00533371 RefSeq:NP_198573.1
UniGene:At.65593 ProteinModelPortal:Q9FHR3 SMR:Q9FHR3
EnsemblPlants:AT5G37570.1 GeneID:833735 KEGG:ath:AT5G37570
GeneFarm:4038 TAIR:At5g37570 eggNOG:NOG280404 InParanoid:Q9FHR3
OMA:LIDMNAK PhylomeDB:Q9FHR3 ProtClustDB:CLSN2686926
Genevestigator:Q9FHR3 Uniprot:Q9FHR3
Length = 550
Score = 150 (57.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 45/162 (27%), Positives = 84/162 (51%)
Query: 1 MTSTKTLINLLKNPVSIKTKSQAKQLHAQIF-KTLEPNSRFLISRLLFIYNNFNLVHDSL 59
+ S +TL L K+ + + Q+HA+I K LE + LIS +FI ++ + SL
Sbjct: 10 LLSLETLFKLCKSEIHLN------QIHARIIRKGLEQDQN-LIS--IFISSSSSS-SSSL 59
Query: 60 CLLDTL--KTPAPPV-AWKSIIRCCTQNGLLVESLTCFVRMIGSGVY-PDHNVFPSVLKS 115
++ + P+P W +I+ + L E+++ +RM+ +G+ PD FP V+K
Sbjct: 60 SYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKV 119
Query: 116 CTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
C+ R G SVH ++R+G D D+ + ++ Y + +++
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDL 161
>TAIR|locus:2007116 [details] [associations]
symbol:AT1G69350 "AT1G69350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC018364 EMBL:AC073178 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00543418
RefSeq:NP_564961.1 UniGene:At.52447 ProteinModelPortal:Q9C507
SMR:Q9C507 PaxDb:Q9C507 PRIDE:Q9C507 EnsemblPlants:AT1G69350.1
GeneID:843267 KEGG:ath:AT1G69350 GeneFarm:3625 TAIR:At1g69350
eggNOG:NOG266087 HOGENOM:HOG000115616 InParanoid:Q9C507 OMA:SSEHFAC
PhylomeDB:Q9C507 Genevestigator:Q9C507 Uniprot:Q9C507
Length = 787
Score = 151 (58.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
++H +I K + + + LL +Y + D+ + D + VAW +++ C +N
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV-RDLVAWSTLVSSCLEN 180
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
G +V++L F M+ GV PD SV++ C L R SVH I R DLD
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 145 NALMNMYAQ 153
N+L+ MY++
Sbjct: 241 NSLLTMYSK 249
Score = 139 (54.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 36/135 (26%), Positives = 76/135 (56%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
KQ+H + +T + + F+ + L+ +Y+ V + + + +K + V W S++ +Q
Sbjct: 425 KQIHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV-VTWNSMLCGFSQ 482
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
NG VE+++ F M S + + F +V+++C+ + G+ VH +I G+ DL+T
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFT 541
Query: 144 NNALMNMYAQSQNMD 158
+ AL++MYA+ +++
Sbjct: 542 DTALIDMYAKCGDLN 556
Score = 139 (54.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHA-QIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
TL ++L + I + K +H + + L+PN L L+ +Y + D +L
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
+ + VAW S+I G+++++L F +M+ + PD S + +C
Sbjct: 365 V-SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G+ +H +IR V D + N+L++MY++S ++D
Sbjct: 424 GKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVD 456
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 38/149 (25%), Positives = 73/149 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T+I++++ + A+ +H QI + + L + LL +Y+ + S + + +
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V+W ++I + ++L F MI SG+ P+ SVL SC L+ R G
Sbjct: 264 -AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG 322
Query: 126 ESVHACIIRLGVDLDLYTNN-ALMNMYAQ 153
+SVH +R +D + + + AL+ +YA+
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAE 351
>TAIR|locus:2124603 [details] [associations]
symbol:AT4G18520 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR PROSITE:PS51375 EMBL:AL161548
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL021710 EMBL:AK229394
IPI:IPI00785911 PIR:T04548 RefSeq:NP_193587.4 UniGene:At.32894
ProteinModelPortal:Q0WNP3 SMR:Q0WNP3 EnsemblPlants:AT4G18520.1
GeneID:827584 KEGG:ath:AT4G18520 GeneFarm:4288 TAIR:At4g18520
eggNOG:NOG297314 HOGENOM:HOG000077484 InParanoid:Q0WNP3 OMA:STLVWFY
PhylomeDB:Q0WNP3 ProtClustDB:CLSN2694120 Genevestigator:Q0WNP3
Uniprot:Q0WNP3
Length = 617
Score = 149 (57.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 42/149 (28%), Positives = 77/149 (51%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFK-TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T++++L+ S+ K+LHAQI K ++E N ++ S L+++Y D+ +L
Sbjct: 387 TVVSILRACGSVGALLLGKELHAQIIKNSIEKNV-YIGSTLVWLYCKCGESRDAFNVLQQ 445
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
L + V+W ++I C+ G E+L MI GV P+ + S LK+C
Sbjct: 446 LPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLI 504
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G S+H+ + +++ +AL++MYA+
Sbjct: 505 GRSIHSIAKKNHALSNVFVGSALIHMYAK 533
Score = 146 (56.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 36/153 (23%), Positives = 78/153 (50%)
Query: 2 TSTKTLINLLKNPVSIKTKSQ-AKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC 60
T+ + + LL N S + + + +Q+H + K N + S L++ Y + +L
Sbjct: 182 TNERMFVCLL-NLCSRRAEFELGRQVHGNMVKVGVGNL-IVESSLVYFYAQCGELTSALR 239
Query: 61 LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLV 120
D ++ ++W ++I C++ G ++++ F+ M+ P+ S+LK+C+
Sbjct: 240 AFDMMEEK-DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 121 DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
RFG VH+ +++ + D++ +LM+MYA+
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAK 331
Score = 39 (18.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 144 NNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASVHEVLDKIPERN 189
N+AL N++ S + H+Y + GF EA V D +PE+N
Sbjct: 515 NHALSNVFVGSALI--HMYAKC---GFVS--EA--FRVFDSMPEKN 551
>TAIR|locus:2034491 [details] [associations]
symbol:AT1G31790 "AT1G31790" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079041 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:BT026440 IPI:IPI00537190
PIR:E86441 RefSeq:NP_174459.1 UniGene:At.23773 UniGene:At.69995
ProteinModelPortal:Q9C6R9 EnsemblPlants:AT1G31790.1 GeneID:840066
KEGG:ath:AT1G31790 GeneFarm:4281 TAIR:At1g31790 eggNOG:NOG309416
HOGENOM:HOG000115669 InParanoid:Q9C6R9 OMA:ESAREND PhylomeDB:Q9C6R9
ProtClustDB:CLSN2682577 Genevestigator:Q9C6R9 Uniprot:Q9C6R9
Length = 409
Score = 147 (56.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKT--LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKT 67
+LK I+ KQ+HA K ++ +L L+ Y F + D+ +L L
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 68 PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF-RFGE 126
A VAW + + + G E + F+ M G+ + +VF +VLK+C+ + D R G+
Sbjct: 259 -ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQ 317
Query: 127 SVHACIIRLGVDLDLYTNNALMNMYAQ 153
VHA I+LG + D L+ MY +
Sbjct: 318 QVHANAIKLGFESDCLIRCRLIEMYGK 344
>TAIR|locus:2117084 [details] [associations]
symbol:AT4G18840 "AT4G18840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL021711 EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520324 PIR:E85212
PIR:T05021 RefSeq:NP_193619.1 UniGene:At.65398
ProteinModelPortal:O49399 SMR:O49399 PRIDE:O49399
EnsemblPlants:AT4G18840.1 GeneID:827618 KEGG:ath:AT4G18840
GeneFarm:4035 TAIR:At4g18840 eggNOG:NOG265885 InParanoid:O49399
OMA:SQGEWVH PhylomeDB:O49399 ProtClustDB:CLSN2685461
Genevestigator:O49399 Uniprot:O49399
Length = 545
Score = 139 (54.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 42/154 (27%), Positives = 72/154 (46%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLL-FIYNNFN--LVHDSLC 60
+ T + +L K+ ++ +Q HA + KT + F S+L+ F N V +
Sbjct: 36 SSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHS 95
Query: 61 LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLV 120
+L+ + +P S+IR + +LT F M+ V+PD F VLK+C
Sbjct: 96 ILNRIGSPNG-FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFC 154
Query: 121 DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQS 154
F G +H I+ G+ D++ N L+N+Y +S
Sbjct: 155 GFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRS 188
Score = 47 (21.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 173 GREASVHEVLDKIPERNGNVELSSGLAGCNKF 204
G+ E++++IP ++ L S L C +F
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRF 486
>TAIR|locus:2056794 [details] [associations]
symbol:REME1 "required for efficiency of mitochondrial
editing 1" species:3702 "Arabidopsis thaliana" [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0009451 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AC007196 EMBL:BT003840 IPI:IPI00519155 PIR:C84453
RefSeq:NP_178481.1 UniGene:At.41363 ProteinModelPortal:Q9SI53
SMR:Q9SI53 PRIDE:Q9SI53 EnsemblPlants:AT2G03880.1 GeneID:814914
KEGG:ath:AT2G03880 GeneFarm:3431 TAIR:At2g03880 eggNOG:NOG254665
InParanoid:Q9SI53 OMA:FRSMKKL PhylomeDB:Q9SI53
ProtClustDB:CLSN2683857 Genevestigator:Q9SI53 Uniprot:Q9SI53
Length = 630
Score = 149 (57.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRC 80
S + LH I K + F+ S L+ ++ D+L + D + T + W SII
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT-GDAIVWNSIIGG 234
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
QN +L F RM +G + SVL++CT L G H I++ D D
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQD 292
Query: 141 LYTNNALMNMYAQSQNMD 158
L NNAL++MY + +++
Sbjct: 293 LILNNALVDMYCKCGSLE 310
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 32/114 (28%), Positives = 66/114 (57%)
Query: 40 FLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIG 99
FL++ L+ +Y FNL++D+ L D + ++W ++I ++ + ++L V M+
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 100 SGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
V P+ + SVL+SC + D R +H II+ G++ D++ +AL++++A+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAK 206
>TAIR|locus:2039817 [details] [associations]
symbol:AT2G39620 "AT2G39620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004218 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00546453 PIR:T00570 RefSeq:NP_181492.1 UniGene:At.66334
ProteinModelPortal:O80647 SMR:O80647 EnsemblPlants:AT2G39620.1
GeneID:818545 KEGG:ath:AT2G39620 GeneFarm:3675 TAIR:At2g39620
eggNOG:NOG285557 HOGENOM:HOG000115625 InParanoid:O80647 OMA:ATAVISM
PhylomeDB:O80647 ProtClustDB:CLSN2683357 Genevestigator:O80647
Uniprot:O80647
Length = 836
Score = 150 (57.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/135 (29%), Positives = 73/135 (54%)
Query: 25 QLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
Q+H + + L+P+++ + + LF + + V + D+++ P V W S+IR T+
Sbjct: 23 QVHGSLIVSGLKPHNQLINAYSLFQRQDLSRV-----IFDSVRDPGV-VLWNSMIRGYTR 76
Query: 84 NGLLVESLTCFVRMIGS-GVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLY 142
GL E+L F M G+ PD F LK+C +DF+ G +H I +G++ D+Y
Sbjct: 77 AGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 143 TNNALMNMYAQSQNM 157
AL+ MY +++++
Sbjct: 137 IGTALVEMYCKARDL 151
>TAIR|locus:2089333 [details] [associations]
symbol:AT3G16610 "AT3G16610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AB022217
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00549054 RefSeq:NP_188283.1 UniGene:At.38870
UniGene:At.66463 ProteinModelPortal:Q9LUS3 SMR:Q9LUS3 PaxDb:Q9LUS3
PRIDE:Q9LUS3 EnsemblPlants:AT3G16610.1 GeneID:820912
KEGG:ath:AT3G16610 GeneFarm:4237 TAIR:At3g16610 eggNOG:NOG326174
InParanoid:Q9LUS3 OMA:KNEVTWS PhylomeDB:Q9LUS3
ProtClustDB:CLSN2913360 Genevestigator:Q9LUS3 Uniprot:Q9LUS3
Length = 654
Score = 149 (57.5 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 40/156 (25%), Positives = 76/156 (48%)
Query: 8 INLLKNPVSIKTKSQAKQLHAQIFK-TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLK 66
++LL+ + + + +H + K +L +S ++ L +Y + N V + + D +
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 67 TPA-PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
P P+AW +IR N ++L + +M+ SGV P +P VLK+C L G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDMHI 161
+ +H+ + D+Y AL++ YA+ ++M I
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 41/148 (27%), Positives = 66/148 (44%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA- 130
+++ S+I C N ES F M SG+ PD VL +C+ L G S H
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGY 434
Query: 131 CIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDRFQ------------GFGFNG-GRE 175
C++ G ++ NALM+MY + +D+ ++D GFG +G G+E
Sbjct: 435 CVVH-GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 176 A-SVHEVLDKIPERNGNVELSSGLAGCN 202
A S+ + + V L + L+ C+
Sbjct: 494 ALSLFNSMQETGVNPDEVTLLAILSACS 521
>TAIR|locus:2013079 [details] [associations]
symbol:AT1G19720 "AT1G19720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007797 EMBL:AC024609 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229137 EMBL:AJ006040
IPI:IPI00522498 PIR:C86330 PIR:T52647 RefSeq:NP_173402.2
UniGene:At.16215 ProteinModelPortal:Q9FXH1 SMR:Q9FXH1 PaxDb:Q9FXH1
PRIDE:Q9FXH1 EnsemblPlants:AT1G19720.1 GeneID:838561
KEGG:ath:AT1G19720 GeneFarm:3162 TAIR:At1g19720 eggNOG:NOG325213
InParanoid:Q9FXH1 OMA:TWNIMIS PhylomeDB:Q9FXH1
ProtClustDB:CLSN2680057 Genevestigator:Q9FXH1 Uniprot:Q9FXH1
Length = 894
Score = 150 (57.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/153 (24%), Positives = 77/153 (50%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T + LL++ + + + LHA+ EP+ F+ ++LL +Y + D+ + D++
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGLFTEPDV-FVETKLLSMYAKCGCIADARKVFDSM 141
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
+ W ++I ++ E F M+ GV PD +FP +L+ C D G
Sbjct: 142 RE-RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+ +H+ +I+LG+ L +N+++ +YA+ +D
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 57 DSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSC 116
D + ++T A W ++I NG+ ++L F +M +GV P+ S + +C
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 117 TLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+ L G VH+ +++G D+ N+L++MY++ ++
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
>TAIR|locus:2088827 [details] [associations]
symbol:AT3G26540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB028611 Pfam:PF13041 IPI:IPI00519926
RefSeq:NP_189286.1 UniGene:At.65162 ProteinModelPortal:Q9LRV2
SMR:Q9LRV2 PRIDE:Q9LRV2 EnsemblPlants:AT3G26540.1 GeneID:822262
KEGG:ath:AT3G26540 GeneFarm:4287 TAIR:At3g26540 eggNOG:NOG262114
HOGENOM:HOG000083802 InParanoid:Q9LRV2 OMA:ECMIELL PhylomeDB:Q9LRV2
ProtClustDB:CLSN2684861 Genevestigator:Q9LRV2 Uniprot:Q9LRV2
Length = 700
Score = 149 (57.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 16 SIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWK 75
++ +++ Q H F L P FL++R + Y V D+ L + + +W
Sbjct: 75 ALVVQARKVQSHLVTFSPLPPI--FLLNRAIEAYGKCGCVDDARELFEEMPE-RDGGSWN 131
Query: 76 SIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
++I C QNG+ E F RM GV F VLKSC L++D R +H +++
Sbjct: 132 AVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKY 191
Query: 136 GVDLDLYTNNALMNMYAQSQNM 157
G ++ +++++Y + + M
Sbjct: 192 GYSGNVDLETSIVDVYGKCRVM 213
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/181 (23%), Positives = 86/181 (47%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+QLH + K + L + ++ +Y ++ D+ + D + P+ V+W I+R +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD-VSWNVIVRRYLE 240
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
G E++ F +M+ V P ++ SV+ +C+ + G+ +HA ++L V D
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 144 NNALMNMYAQSQNMDM--HIYDR------------FQGFGFNG-GREASVHEVLDKIPER 188
+ ++ +MY + ++ ++D+ G+ +G REA E+ D +PER
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA--RELFDLMPER 358
Query: 189 N 189
N
Sbjct: 359 N 359
>TAIR|locus:2076456 [details] [associations]
symbol:AT3G58590 "AT3G58590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL137082 Pfam:PF13041
EMBL:AK229655 IPI:IPI00544751 PIR:T45679 RefSeq:NP_191418.2
UniGene:At.43654 UniGene:At.48781 ProteinModelPortal:Q0WN01
SMR:Q0WN01 PRIDE:Q0WN01 EnsemblPlants:AT3G58590.1 GeneID:825028
KEGG:ath:AT3G58590 TAIR:At3g58590 eggNOG:NOG289005
HOGENOM:HOG000238280 InParanoid:Q9M2F7 OMA:LITWTAL PhylomeDB:Q0WN01
ProtClustDB:CLSN2680448 Genevestigator:Q0WN01 Uniprot:Q0WN01
Length = 741
Score = 149 (57.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 36 PNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFV 95
P S ++ + IY+ H+S+ L+ TL+ P V+W I C+++ E + F
Sbjct: 476 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP-DTVSWNIAIAACSRSDYHEEVIELFK 534
Query: 96 RMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL-DLYTNNALMNMYAQ 153
M+ S + PD F S+L C+ L D G S+H I + D + N L++MY +
Sbjct: 535 HMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGK 593
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 35/153 (22%), Positives = 68/153 (44%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
+ + +LK +K +KQLH K +++ L+ Y H + +
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
+ V+W +II ++ +++L FV M G P+ + SVL +L+ G
Sbjct: 277 GS-WDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+H +I+ G + + NAL++ YA+ N++
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Score = 113 (44.8 bits), Expect = 0.00090, P = 0.00090
Identities = 37/154 (24%), Positives = 74/154 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T +++L ++ S +Q+H + K L + L+ Y + DS D +
Sbjct: 318 TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI 377
Query: 66 KTPAPPVAWKSIIR-CCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
+ V W +++ ++G + SL F++M+ G P F + LKSC + +
Sbjct: 378 RDKNI-VCWNALLSGYANKDGPICLSL--FLQMLQMGFRPTEYTFSTALKSCCV-TEL-- 431
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+ +H+ I+R+G + + Y ++LM YA++Q M+
Sbjct: 432 -QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
>TAIR|locus:2087969 [details] [associations]
symbol:AT3G13880 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB028610 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BX824350
IPI:IPI00540943 RefSeq:NP_188004.1 UniGene:At.50181
ProteinModelPortal:Q9LRV9 SMR:Q9LRV9 PRIDE:Q9LRV9
EnsemblPlants:AT3G13880.1 GeneID:820601 KEGG:ath:AT3G13880
GeneFarm:3843 TAIR:At3g13880 eggNOG:NOG298605 InParanoid:Q9LRV9
OMA:MNACASL PhylomeDB:Q9LRV9 ProtClustDB:CLSN2722886
Genevestigator:Q9LRV9 Uniprot:Q9LRV9
Length = 748
Score = 149 (57.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 41/158 (25%), Positives = 68/158 (43%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSL-CL 61
S T +LK + KT +Q+HA I K + F+ S L+ +Y D + C
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 62 LDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVD 121
T K +W S+I C QN L + F ++ S + P+ ++ +C
Sbjct: 417 ASTSKQDI--ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAA 474
Query: 122 FRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM 159
GE + I+ G+D + ++MYA+S NM +
Sbjct: 475 LSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 40 FLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIG 99
FLI+ L+ +Y+ + ++ L D V+W S+I + G E L +M
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDE-RDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 100 SGVYPDHNVFPSVLKSCTLLVDFRF---GESVHACIIRLGVDLDLYTNNALMNMYAQSQN 156
G+ SVLK+C + ++ F G ++H +LG++ D+ AL++MYA++ +
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 157 M 157
+
Sbjct: 303 L 303
>TAIR|locus:2131631 [details] [associations]
symbol:AT4G35130 "AT4G35130" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 EMBL:AL022023 EMBL:AL161586 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00533040 PIR:T05783 RefSeq:NP_195239.1 UniGene:At.65456
ProteinModelPortal:O49619 SMR:O49619 PRIDE:O49619
EnsemblPlants:AT4G35130.1 GeneID:829665 KEGG:ath:AT4G35130
GeneFarm:3322 TAIR:At4g35130 eggNOG:NOG324832 InParanoid:O49619
OMA:HDNTGCY PhylomeDB:O49619 ProtClustDB:CLSN2685935
Genevestigator:O49619 Uniprot:O49619
Length = 804
Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 34/110 (30%), Positives = 61/110 (55%)
Query: 42 ISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSG 101
++R L + + L+ D+L L D + A W +I+ T GL +E++ + RM+ +G
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 102 VYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMY 151
V D +P V+KS + G+ +HA +I+LG D+Y N+L+++Y
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
>TAIR|locus:2089591 [details] [associations]
symbol:AT3G14730 "AT3G14730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB023038
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00531281
RefSeq:NP_188091.1 UniGene:At.65089 ProteinModelPortal:Q9LUC2
SMR:Q9LUC2 PRIDE:Q9LUC2 EnsemblPlants:AT3G14730.1 GeneID:820701
KEGG:ath:AT3G14730 GeneFarm:3860 TAIR:At3g14730 eggNOG:NOG247744
InParanoid:Q9LUC2 OMA:REIHGYM PhylomeDB:Q9LUC2
ProtClustDB:CLSN2684945 Genevestigator:Q9LUC2 Uniprot:Q9LUC2
Length = 653
Score = 148 (57.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 41/150 (27%), Positives = 73/150 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T +LLK +++ S K++H FK + ++ S L+ Y+ F V D+ + D L
Sbjct: 163 TFPSLLKGSDAMEL-SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDEL 221
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V W +++ +Q ++L F +M GV + SVL + T+ D G
Sbjct: 222 PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQ 155
S+H ++ G D+ +NAL++MY +S+
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
>TAIR|locus:2103483 [details] [associations]
symbol:OTP84 "ORGANELLE TRANSCRIPT PROCESSING 84"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
EMBL:AL133248 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0031425 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BT008634
IPI:IPI00527739 PIR:T46179 RefSeq:NP_191302.2 UniGene:At.34834
ProteinModelPortal:Q7Y211 SMR:Q7Y211 EnsemblPlants:AT3G57430.1
GeneID:824910 KEGG:ath:AT3G57430 GeneFarm:3528 TAIR:At3g57430
eggNOG:NOG252051 InParanoid:Q7Y211 OMA:VAKNLRV PhylomeDB:Q7Y211
ProtClustDB:CLSN2680439 Genevestigator:Q7Y211 Uniprot:Q7Y211
Length = 890
Score = 149 (57.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 41/135 (30%), Positives = 69/135 (51%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
KQ+HA + E NS F+I+ L+ +Y + S LL + V W +++ Q
Sbjct: 222 KQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQ 279
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLG-VDLDLY 142
N L+E+L M+ GV PD SVL +C+ L R G+ +HA ++ G +D + +
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 143 TNNALMNMYAQSQNM 157
+AL++MY + +
Sbjct: 340 VGSALVDMYCNCKQV 354
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 71 PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA 130
P W ++R ++ LL E++ +V MI G+ PD+ FP++LK+ L D G+ +HA
Sbjct: 62 PEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 131 CIIRLGVDLDLYT-NNALMNMYAQSQNMDM--HIYDR 164
+ + G +D T N L+N+Y + + ++DR
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/148 (27%), Positives = 73/148 (49%)
Query: 24 KQLHAQIFK--TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCC 81
K+LHA K +L+ NS F+ S L+ +Y N V + D + + W ++I
Sbjct: 322 KELHAYALKNGSLDENS-FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGY 379
Query: 82 TQNGLLVESLTCFVRMIGS-GVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
+QN E+L F+ M S G+ + V+ +C F E++H +++ G+D D
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 141 LYTNNALMNMYAQSQNMD--MHIYDRFQ 166
+ N LM+MY++ +D M I+ + +
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKME 467
>TAIR|locus:2034456 [details] [associations]
symbol:AT1G31920 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079041 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226634 IPI:IPI00541310 PIR:D86443 RefSeq:NP_174474.1
UniGene:At.17278 ProteinModelPortal:Q9C6T2 SMR:Q9C6T2
EnsemblPlants:AT1G31920.1 GeneID:840082 KEGG:ath:AT1G31920
GeneFarm:3171 TAIR:At1g31920 eggNOG:NOG324786 InParanoid:Q9C6T2
OMA:MEWQLKF PhylomeDB:Q9C6T2 ProtClustDB:CLSN2682592
Genevestigator:Q9C6T2 Uniprot:Q9C6T2
Length = 606
Score = 147 (56.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 24 KQLHAQIFK-TLEPNSRFLISRLLF--IYNNF-NLVHDSLCLLDTLKTPAPPVAWKSIIR 79
KQ+HA+ K +L +S F S +L ++ + N ++ + + + P + ++IR
Sbjct: 47 KQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCT-FDFNTMIR 105
Query: 80 CCTQNGLLVESLTCFVR-MIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVD 138
N + E CF M+ G PD+ +P +LK+CT L R G+ +H + +LG++
Sbjct: 106 GYV-NVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE 164
Query: 139 LDLYTNNALMNMYAQSQNMDM 159
D++ N+L+NMY + M++
Sbjct: 165 ADVFVQNSLINMYGRCGEMEL 185
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 38/161 (23%), Positives = 77/161 (47%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTP 68
LLK +K+ + KQ+H Q+FK LE + F+ + L+ +Y + S + + L++
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADV-FVQNSLINMYGRCGEMELSSAVFEKLESK 196
Query: 69 APPVAWKSIIRCCTQNGLLVESLTCFVRMIG-SGVYPDHNVFPSVLKSCTLLVDFRFGES 127
+W S++ G+ E L F M + + + + S L +C G S
Sbjct: 197 TA-ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 128 VHACIIRLGVDLDLYTNNALMNMYAQSQNMD--MHIYDRFQ 166
+H ++R +L++ +L++MY + +D +HI+ + +
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME 296
>TAIR|locus:2040565 [details] [associations]
symbol:AT2G36730 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
EMBL:AC006282 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00541658 PIR:A84784 RefSeq:NP_181211.1 UniGene:At.66328
ProteinModelPortal:Q9ZQA1 PaxDb:Q9ZQA1 PRIDE:Q9ZQA1
EnsemblPlants:AT2G36730.1 GeneID:818245 KEGG:ath:AT2G36730
GeneFarm:3668 TAIR:At2g36730 eggNOG:NOG273447 InParanoid:Q9ZQA1
OMA:YGAMVDI PhylomeDB:Q9ZQA1 ProtClustDB:CLSN2683944
Genevestigator:Q9ZQA1 Uniprot:Q9ZQA1
Length = 501
Score = 146 (56.5 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL---KTPAPPVAWKSIIRCC 81
Q+H QI + N F+IS L+ + ++ +L D L TL + + P W + R
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRV-SSLSLAKD-LAFARTLLLHSSDSTPSTWNMLSRGY 88
Query: 82 TQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
+ + VES+ + M G+ P+ FP +LK+C + G + +++ G D D+
Sbjct: 89 SSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDV 148
Query: 142 YTNNALMNMY 151
Y N L+++Y
Sbjct: 149 YVGNNLIHLY 158
Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
LLK S + +Q+ ++ K ++ + L+ +Y D+ + D + T
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM-TER 177
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
V+W SI+ +NG L CF MIG PD +L +C + G+ VH
Sbjct: 178 NVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVH 235
Query: 130 ACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+ ++ ++L+ AL++MYA+S ++
Sbjct: 236 SQVMVRELELNCRLGTALVDMYAKSGGLE 264
>TAIR|locus:2151501 [details] [associations]
symbol:AT5G46460 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB019223 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533243 RefSeq:NP_199458.1
UniGene:At.29955 ProteinModelPortal:Q9FHF9 SMR:Q9FHF9
EnsemblPlants:AT5G46460.1 GeneID:834689 KEGG:ath:AT5G46460
GeneFarm:3435 TAIR:At5g46460 eggNOG:NOG266955 InParanoid:Q9FHF9
OMA:DEQKEEM PhylomeDB:Q9FHF9 ProtClustDB:CLSN2686182
Genevestigator:Q9FHF9 Uniprot:Q9FHF9
Length = 697
Score = 147 (56.8 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
Q+H I K ++ + L+ Y N + DS + D K W +++ + N
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSLN 304
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
++L+ F M+ + + P+ + F S L SC+ L +G+ +H ++LG++ D +
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 145 NALMNMYAQSQNMD 158
N+L+ MY+ S N++
Sbjct: 365 NSLVVMYSDSGNVN 378
>TAIR|locus:2012295 [details] [associations]
symbol:AT1G09410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 EMBL:AC003970 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 UniGene:At.70699 Pfam:PF12854
HOGENOM:HOG000237570 EMBL:DQ446238 EMBL:AK221693 IPI:IPI00525858
IPI:IPI00570432 PIR:D86227 RefSeq:NP_172412.1 UniGene:At.63945
ProteinModelPortal:Q56XI1 SMR:Q56XI1 PRIDE:Q56XI1
EnsemblPlants:AT1G09410.1 GeneID:837463 KEGG:ath:AT1G09410
GeneFarm:3184 TAIR:At1g09410 eggNOG:NOG252899 InParanoid:O80524
OMA:NEAMEMI PhylomeDB:Q56XI1 Genevestigator:Q56XI1 Uniprot:Q56XI1
Length = 705
Score = 147 (56.8 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 61 LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLV 120
+ D++K +W+++I+ +NG +E+L F+ M GV P S+L C L
Sbjct: 287 VFDSMKE-RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 121 DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM--DMHIYDRF 165
G+ VHA ++R D+D+Y + LM MY + + I+DRF
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
>TAIR|locus:2006927 [details] [associations]
symbol:AT1G33350 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 EMBL:AC051630 PROSITE:PS51375 EMBL:AC027035
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK118395 EMBL:AK222040 EMBL:BT005240 IPI:IPI00522025
PIR:C86457 RefSeq:NP_174603.1 UniGene:At.24521
ProteinModelPortal:Q9C501 SMR:Q9C501 PRIDE:Q9C501
EnsemblPlants:AT1G33350.1 GeneID:840229 KEGG:ath:AT1G33350
GeneFarm:3606 TAIR:At1g33350 eggNOG:NOG296254 InParanoid:Q9C501
OMA:LLNACTH PhylomeDB:Q9C501 ProtClustDB:CLSN2679262
Genevestigator:Q9C501 Uniprot:Q9C501
Length = 538
Score = 143 (55.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 26 LHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNG 85
L Q+F + + + +L Y + +++ L + + P +W +I+ CTQNG
Sbjct: 180 LARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP-SWNAILAACTQNG 238
Query: 86 LLVESLTCFVRMIGS-GVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
L +E+++ F RMI + P+ VL +C + + +HA R + D++ +
Sbjct: 239 LFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVS 298
Query: 145 NALMNMYAQSQNMD 158
N+L+++Y + N++
Sbjct: 299 NSLVDLYGKCGNLE 312
>TAIR|locus:2168963 [details] [associations]
symbol:AT5G47460 "AT5G47460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025628 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00516266
RefSeq:NP_199557.1 UniGene:At.29890 UniGene:At.66689
ProteinModelPortal:Q9FGL1 SMR:Q9FGL1 PaxDb:Q9FGL1 PRIDE:Q9FGL1
EnsemblPlants:AT5G47460.1 GeneID:834796 KEGG:ath:AT5G47460
GeneFarm:4043 TAIR:At5g47460 eggNOG:NOG299819 HOGENOM:HOG000115646
InParanoid:Q9FGL1 OMA:PNSSSWN PhylomeDB:Q9FGL1
ProtClustDB:CLSN2686376 Genevestigator:Q9FGL1 Uniprot:Q9FGL1
Length = 576
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/154 (25%), Positives = 77/154 (50%)
Query: 7 LINLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
L++LL+ + S +QLH + K N+R L + L+ Y + + D+ + D +
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTR-LSNSLMRFYKTSDSLEDAHKVFDEM 116
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
P ++W S++ Q+G E + F+ + S V+P+ F + L +C L G
Sbjct: 117 PDP-DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG 175
Query: 126 ESVHACIIRLGVDL-DLYTNNALMNMYAQSQNMD 158
+H+ +++LG++ ++ N L++MY + MD
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMD 209
>TAIR|locus:2057630 [details] [associations]
symbol:AT2G33680 "AT2G33680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237570
IPI:IPI00531746 PIR:C84748 RefSeq:NP_180924.1 UniGene:At.66302
ProteinModelPortal:P93005 SMR:P93005 EnsemblPlants:AT2G33680.1
GeneID:817933 KEGG:ath:AT2G33680 GeneFarm:3665 TAIR:At2g33680
eggNOG:NOG291314 InParanoid:P93005 OMA:NSITWSA PhylomeDB:P93005
ProtClustDB:CLSN2683505 Genevestigator:P93005 Uniprot:P93005
Length = 727
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S T++ +L I + KQLH+ + K F + L+ +Y + D+
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
D L+ W S+I QN E+L + RM +G+ P+ SVLK+C+ L
Sbjct: 381 DCLQE-RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G+ VH I+ G L++ +AL MY++ +++
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/131 (22%), Positives = 67/131 (51%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+Q+H K L + L+ +Y+ ++++ + D+ + W +++ +Q
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQ 299
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
NG +E++ F RM +G+ P VL +C+ + G+ +H+ +++LG + L+
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 144 NNALMNMYAQS 154
AL++MYA++
Sbjct: 360 TTALVDMYAKA 370
>TAIR|locus:2198811 [details] [associations]
symbol:MEF3 "AT1G06140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
Gene3D:1.25.40.10 EMBL:AC024174 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
IPI:IPI00535707 PIR:G86196 RefSeq:NP_172104.1 UniGene:At.51500
ProteinModelPortal:Q9LND4 SMR:Q9LND4 PaxDb:Q9LND4 PRIDE:Q9LND4
EnsemblPlants:AT1G06140.1 GeneID:837123 KEGG:ath:AT1G06140
GeneFarm:3612 TAIR:At1g06140 eggNOG:NOG307299 InParanoid:Q9LND4
OMA:VHGYMIR PhylomeDB:Q9LND4 ProtClustDB:CLSN2682285
Genevestigator:Q9LND4 Uniprot:Q9LND4
Length = 558
Score = 142 (55.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHA-QIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
TLI L+K ++ K +H I ++ S +L + ++ +Y L+ ++ L +T
Sbjct: 212 TLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET 271
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
V W ++I + VE+ F +M+ + P+ ++L SC+ L R
Sbjct: 272 -SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRH 330
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM 159
G+SVH +IR G+++D + ++MYA+ N+ M
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQM 365
>TAIR|locus:2183886 [details] [associations]
symbol:RARE1 "REQUIRED FOR ACCD RNA EDITING 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL163491
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546730 PIR:T48574 RefSeq:NP_196831.1
UniGene:At.65509 ProteinModelPortal:Q9LYU9 SMR:Q9LYU9 PaxDb:Q9LYU9
PRIDE:Q9LYU9 EnsemblPlants:AT5G13270.1 GeneID:831168
KEGG:ath:AT5G13270 GeneFarm:3538 TAIR:At5g13270 eggNOG:NOG273627
InParanoid:Q9LYU9 OMA:PDAMSWK PhylomeDB:Q9LYU9
ProtClustDB:CLSN2687008 Genevestigator:Q9LYU9 Uniprot:Q9LYU9
Length = 752
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/149 (24%), Positives = 75/149 (50%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
LLK+ V+ + +Q+HA + + ++ + + ++ +Y + + + D +
Sbjct: 190 LLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKK 249
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
P VA ++ TQ G ++L FV ++ GV D VF VLK+C L + G+ +H
Sbjct: 250 P-VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIH 308
Query: 130 ACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
AC+ +LG++ ++ L++ Y + + +
Sbjct: 309 ACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 33/137 (24%), Positives = 68/137 (49%)
Query: 17 IKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKS 76
+++ S + LH ++ +E S L + +L +Y + D+ L D + + V+ +
Sbjct: 96 LRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM-SELNAVSRTT 154
Query: 77 IIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLG 136
+I + G+L +++ F M+ SG P +++ ++LKS FG +HA +IR G
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 137 VDLDLYTNNALMNMYAQ 153
+ + ++NMY +
Sbjct: 215 LCSNTSIETGIVNMYVK 231
>TAIR|locus:2154855 [details] [associations]
symbol:AT5G66520 "AT5G66520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00529723
RefSeq:NP_201453.1 UniGene:At.55714 ProteinModelPortal:Q9FJY7
SMR:Q9FJY7 EnsemblPlants:AT5G66520.1 GeneID:836784
KEGG:ath:AT5G66520 GeneFarm:3455 TAIR:At5g66520 eggNOG:NOG260190
InParanoid:Q9FJY7 OMA:PHNAYTF PhylomeDB:Q9FJY7
ProtClustDB:CLSN2686844 Genevestigator:Q9FJY7 Uniprot:Q9FJY7
Length = 620
Score = 142 (55.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 43/150 (28%), Positives = 76/150 (50%)
Query: 20 KSQAKQLHAQIFKTLEPNSRFLISRLL-FIYNNFN--LVHDSLCLLDTLKTPAPPVAWKS 76
+ + KQ+HA++ KT + I++ L F ++ + + + + D P W
Sbjct: 27 QEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP-DTFLWNL 85
Query: 77 IIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLG 136
+IR + + SL + RM+ S + FPS+LK+C+ L F +HA I +LG
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 137 VDLDLYTNNALMNMYAQSQNMDM-HI-YDR 164
+ D+Y N+L+N YA + N + H+ +DR
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDR 175
>TAIR|locus:2196583 [details] [associations]
symbol:ECB2 "EARLY CHLOROPLAST BIOGENESIS2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0040007 GO:GO:0009507 GO:GO:0009658
EMBL:AC013453 GO:GO:0009416 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00522462 PIR:H86288
RefSeq:NP_173004.1 UniGene:At.41931 ProteinModelPortal:Q9M9E2
SMR:Q9M9E2 PRIDE:Q9M9E2 EnsemblPlants:AT1G15510.1 GeneID:838121
KEGG:ath:AT1G15510 GeneFarm:3519 TAIR:At1g15510 eggNOG:NOG295763
InParanoid:Q9M9E2 OMA:FCGHSER PhylomeDB:Q9M9E2 ProtClustDB:PLN03077
ArrayExpress:Q9M9E2 Genevestigator:Q9M9E2 Uniprot:Q9M9E2
Length = 866
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
+L+ I ++ K++H + + +++ L+ +Y V + L D +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPR-R 260
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
++W ++I +NG+ E L F M G V PD SV+ +C LL D R G +H
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 130 ACIIRLGVDLDLYTNNALMNMY 151
A +I G +D+ N+L MY
Sbjct: 321 AYVITTGFAVDISVCNSLTQMY 342
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 73 AWKSIIRCCTQNGLLVESLTCFVRMIG-SGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
+W ++ + G E++ + RM+ GV PD FP VL++C + D G+ VH
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
++R G +LD+ NAL+ MY +
Sbjct: 222 VVRYGYELDIDVVNALITMYVK 243
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 41 LISRLLFIYNNFNLVHDSLCL---LDTLKT-PAPPV-AWKSIIRCCTQNGLLVESLTCFV 95
LIS ++ N N+ C+ LD P V +W SII N E+L F+
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI-FL 487
Query: 96 RMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQ 155
R + + P+ + L +C + G+ +HA ++R GV LD + NAL++MY +
Sbjct: 488 RQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 156 NMD 158
M+
Sbjct: 548 RMN 550
>TAIR|locus:2148101 [details] [associations]
symbol:AT5G16860 "AT5G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AL391141
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00533068 PIR:T51541
RefSeq:NP_197188.1 UniGene:At.54872 ProteinModelPortal:Q9LFL5
SMR:Q9LFL5 EnsemblPlants:AT5G16860.1 GeneID:831549
KEGG:ath:AT5G16860 GeneFarm:3540 TAIR:At5g16860 eggNOG:NOG251129
InParanoid:Q9LFL5 OMA:FTISCAL PhylomeDB:Q9LFL5
ProtClustDB:CLSN2686178 Genevestigator:Q9LFL5 Uniprot:Q9LFL5
Length = 850
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 44/143 (30%), Positives = 68/143 (47%)
Query: 18 KTKSQAKQLHAQI--FKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLK-TPAPPVAW 74
KT SQ K +H ++ F L N L S L+ Y + + ++ LL + A W
Sbjct: 39 KTISQVKLIHQKLLSFGILTLN---LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 75 KSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIR 134
S+IR NG + L F M PD+ FP V K+C + R GES HA +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 135 LGVDLDLYTNNALMNMYAQSQNM 157
G +++ NAL+ MY++ +++
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSL 178
>TAIR|locus:2195296 [details] [associations]
symbol:AT1G09190 "AT1G09190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC003114 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
EMBL:BT003981 IPI:IPI00534482 PIR:E86224 RefSeq:NP_172391.2
UniGene:At.42236 ProteinModelPortal:O80488
EnsemblPlants:AT1G09190.1 GeneID:837439 KEGG:ath:AT1G09190
GeneFarm:3632 TAIR:At1g09190 eggNOG:NOG278020 InParanoid:O80488
OMA:YNTLITA PhylomeDB:O80488 ProtClustDB:CLSN2708431
Genevestigator:O80488 Uniprot:O80488
Length = 484
Score = 139 (54.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 48/202 (23%), Positives = 99/202 (49%)
Query: 19 TKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSII 78
T+++ ++HA + + S L++ + I + + + + ++ P V + ++I
Sbjct: 16 TRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLV-FNAMI 74
Query: 79 RCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVD 138
+C + G +ESL+ F M G++ D + +LKSC+ L D RFG+ VH +IR G
Sbjct: 75 KCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFH 134
Query: 139 ---------LDLYTNNALMN----MYAQSQNMDMHIYD-RFQGFGFNGGREASVHEVLDK 184
++LYT+ M ++ + ++ +++ +GF +G E +H + +
Sbjct: 135 RLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH-LFKQ 193
Query: 185 IPERN---GNVELSSGLAGCNK 203
+ ER+ N +SS L+ C +
Sbjct: 194 MSERSIVSWNSMISS-LSKCGR 214
>TAIR|locus:2063771 [details] [associations]
symbol:AT2G03380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006284
HOGENOM:HOG000237570 IPI:IPI00538767 PIR:G84447 RefSeq:NP_178437.1
UniGene:At.52621 ProteinModelPortal:Q9ZQ74 SMR:Q9ZQ74 PaxDb:Q9ZQ74
PRIDE:Q9ZQ74 EnsemblPlants:AT2G03380.1 GeneID:814867
KEGG:ath:AT2G03380 GeneFarm:3664 TAIR:At2g03380 eggNOG:NOG251025
InParanoid:Q9ZQ74 OMA:GAFLHGC PhylomeDB:Q9ZQ74
ProtClustDB:CLSN2683830 Genevestigator:Q9ZQ74 Uniprot:Q9ZQ74
Length = 689
Score = 140 (54.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCC 81
Q K H + K+ S L++ LL +Y + ++ + + + V W ++I
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE-HSHVDLVMWTAMIVGY 318
Query: 82 TQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
T NG + E+L+ F +M G + P+ SVL C L+ + G SVH I++G+ D
Sbjct: 319 THNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDT 377
Query: 142 YTNNALMNMYAQS-QNMD 158
NAL++MYA+ QN D
Sbjct: 378 NVANALVHMYAKCYQNRD 395
Score = 124 (48.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 47/212 (22%), Positives = 95/212 (44%)
Query: 11 LKNPVSIKTKSQAKQLHAQIFKTLEPN-SRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
LK ++ K++H Q+ K P+ +++ LL +Y + + + + + T
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKV--PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDI-TLR 205
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
V W S+I +N L E L F RM + V + + +++ +CT L G+ H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 130 ACIIRLGVDLDLYTNNALMNMYA-------------QSQNMDMHIYDRF-QGFGFNGG-R 174
C+++ G++L +L++MY + ++D+ ++ G+ NG
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 175 EA-SVHEVLDKIPERNGNVELSSGLAGCNKFE 205
EA S+ + + + + V ++S L+GC E
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 357
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
VAW SII +QNG + E+L F RM V P+ S+ +C L G S+HA
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 132 IIRLG--VDLDLYTNNALMNMYAQ 153
++LG ++ AL++ YA+
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAK 492
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 31/114 (27%), Positives = 55/114 (48%)
Query: 41 LISRLLFIYNNFNLVHDSLCLLDTLKTPAPPV-AWKSIIRCCTQNGLLVESLTCFVRMIG 99
+ ++L+ +Y F D+ + D + P P WK ++RC N VE + + ++
Sbjct: 78 IATKLVSLYGFFGYTKDARLVFDQI--PEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMK 135
Query: 100 SGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G D VF LK+CT L D G+ +H ++++ D L++MYA+
Sbjct: 136 HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAK 188
>TAIR|locus:2011892 [details] [associations]
symbol:AT1G50270 "AT1G50270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007059 "chromosome segregation" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007980 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229256
IPI:IPI00525612 PIR:A96539 RefSeq:NP_175445.1 UniGene:At.23103
UniGene:At.68562 ProteinModelPortal:Q9SX45 PRIDE:Q9SX45
EnsemblPlants:AT1G50270.1 GeneID:841449 KEGG:ath:AT1G50270
GeneFarm:3610 TAIR:At1g50270 eggNOG:NOG310185 InParanoid:Q9SX45
OMA:HEFIAFD ProtClustDB:CLSN2682713 Genevestigator:Q9SX45
Uniprot:Q9SX45
Length = 596
Score = 139 (54.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 46/157 (29%), Positives = 73/157 (46%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S T LLK ++ S Q HA I K + F+ + L+ Y++ L + L
Sbjct: 103 SRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLF 161
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
D + V W ++I +NG E++ FV M +GV + SVLK+ + D
Sbjct: 162 DGAEDK-DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDV 220
Query: 123 RFGESVHACIIRLG-VDLDLYTNNALMNMYAQSQNMD 158
RFG SVH + G V D++ ++L++MY + D
Sbjct: 221 RFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
>TAIR|locus:2115130 [details] [associations]
symbol:AT4G37170 "AT4G37170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z99707 EMBL:AL161590 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00546419 PIR:B85439
RefSeq:NP_195434.1 UniGene:At.65464 ProteinModelPortal:O23169
SMR:O23169 PRIDE:O23169 EnsemblPlants:AT4G37170.1 GeneID:829871
KEGG:ath:AT4G37170 GeneFarm:3146 TAIR:At4g37170 eggNOG:NOG313360
InParanoid:O23169 OMA:QNGQPDE PhylomeDB:O23169
ProtClustDB:CLSN2685770 Genevestigator:O23169 Uniprot:O23169
Length = 691
Score = 139 (54.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 35/150 (23%), Positives = 71/150 (47%)
Query: 16 SIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWK 75
++K + K++H I + + L S L+ +Y + ++ + D + V+W
Sbjct: 230 AVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWT 288
Query: 76 SIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
S+I ++ E + F ++GS P+ F VL +C L G+ VH + R+
Sbjct: 289 SMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV 348
Query: 136 GVDLDLYTNNALMNMYAQSQNMDM--HIYD 163
G D + +++L++MY + N++ H+ D
Sbjct: 349 GFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Score = 130 (50.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T +L + T+ KQ+H + + +P S F S L+ +Y + + ++D
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS-FASSSLVDMYTKCGNIESAKHVVDG 379
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCT 117
P V+W S+I C QNG E+L F ++ SG PDH F +VL +CT
Sbjct: 380 CPKP-DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACT 431
>TAIR|locus:2010652 [details] [associations]
symbol:AT1G04840 "AT1G04840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC004809 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518058 PIR:F86181 RefSeq:NP_171976.1
UniGene:At.51482 ProteinModelPortal:Q9MAT2 SMR:Q9MAT2
EnsemblPlants:AT1G04840.1 GeneID:839402 KEGG:ath:AT1G04840
GeneFarm:3457 TAIR:At1g04840 eggNOG:NOG254388 InParanoid:Q9MAT2
OMA:GDCHSLM PhylomeDB:Q9MAT2 ProtClustDB:CLSN2681950
Genevestigator:Q9MAT2 Uniprot:Q9MAT2
Length = 665
Score = 137 (53.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 44/150 (29%), Positives = 77/150 (51%)
Query: 18 KTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSI 77
K + + +HAQI + +SR + ++L+ + SL + + P V ++
Sbjct: 40 KDTASLRHVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVL-NAL 97
Query: 78 IRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF-GESVHACIIRLG 136
IR T+N S+ F+ M+ GV PD FP VLKS + L FR+ G ++HA ++
Sbjct: 98 IRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL-GFRWLGRALHAATLKNF 156
Query: 137 VDLDLYTNNALMNMYAQSQNMDMHIYDRFQ 166
VD D + +L++MYA++ + H + F+
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLK-HAFQVFE 185
Score = 38 (18.4 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 169 GFNGGREASVHEVLDKIPE 187
G+N G + S+H++ ++ E
Sbjct: 573 GYNPGADWSIHDIEEEEKE 591
>TAIR|locus:2054789 [details] [associations]
symbol:MEF21 "mitochondrial editing factor 21"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007109 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
EMBL:DQ056537 IPI:IPI00521897 PIR:E84590 RefSeq:NP_179644.1
UniGene:At.50086 ProteinModelPortal:Q9SIL5 SMR:Q9SIL5
EnsemblPlants:AT2G20540.1 GeneID:816576 KEGG:ath:AT2G20540
GeneFarm:3690 TAIR:At2g20540 eggNOG:NOG269713 InParanoid:Q9SIL5
OMA:ICNALME PhylomeDB:Q9SIL5 ProtClustDB:CLSN2683323
Genevestigator:Q9SIL5 Uniprot:Q9SIL5
Length = 534
Score = 137 (53.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 36/150 (24%), Positives = 74/150 (49%)
Query: 17 IKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKS 76
+K++++ K+++A I S F++++++ + + + L + + P + S
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV-FLYNS 78
Query: 77 IIRCCTQNGLLVESLTCFVRMIGSGV-YPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
IIR T N L + + + +++ PD FP + KSC L G+ VH + +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 136 GVDLDLYTNNALMNMYAQSQNM-DMH-IYD 163
G + T NAL++MY + ++ D H ++D
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFD 168
>TAIR|locus:2028850 [details] [associations]
symbol:AT1G23450 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009688 "abscisic
acid biosynthetic process" evidence=RCA] InterPro:IPR002885
EMBL:CP002684 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
IPI:IPI00526344 RefSeq:NP_173759.2 UniGene:At.74534
ProteinModelPortal:F4I671 PRIDE:F4I671 EnsemblPlants:AT1G23450.1
GeneID:838953 KEGG:ath:AT1G23450 OMA:SEDVISW ArrayExpress:F4I671
Uniprot:F4I671
Length = 666
Score = 138 (53.6 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHD-SLCLLDTLKTPAPPV-AWKSIIR 79
+ KQLH+ + K+ S ++ +L Y ++ D S + P V +W SI+
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDY--YSACGDLSGSMRSFNAVPEKDVISWNSIVS 288
Query: 80 CCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL 139
C G +++SL F +M G P F S L C+ D + G+ +H ++++G D+
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDV 348
Query: 140 D-LYTNNALMNMYAQSQNMD 158
L+ +AL++MY + ++
Sbjct: 349 SSLHVQSALIDMYGKCNGIE 368
>TAIR|locus:2078653 [details] [associations]
symbol:AT3G02010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011664 EMBL:AC010797
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00527957 RefSeq:NP_186850.1 UniGene:At.53156
ProteinModelPortal:Q9S7F4 SMR:Q9S7F4 PRIDE:Q9S7F4
EnsemblPlants:AT3G02010.1 GeneID:821085 KEGG:ath:AT3G02010
GeneFarm:3358 TAIR:At3g02010 eggNOG:NOG280481 InParanoid:Q9S7F4
OMA:PAYSWVE PhylomeDB:Q9S7F4 ProtClustDB:CLSN2685183
Genevestigator:Q9S7F4 Uniprot:Q9S7F4
Length = 825
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 48/192 (25%), Positives = 86/192 (44%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T++++ N S++ +QLH Q + + + L+ +Y + ++ + +L
Sbjct: 356 TMLSIAANLSSLQ---MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V+W ++I Q GL L F +M GS + D + F +VLK+ G
Sbjct: 413 PQRTT-VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASVHEVLDKI 185
+ +HA IIR G ++++ + L++MYA+ + I D Q F R A L
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGS----IKDAVQVFEEMPDRNAVSWNALISA 527
Query: 186 PERNGNVELSSG 197
NG+ E + G
Sbjct: 528 HADNGDGEAAIG 539
Score = 118 (46.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 25 QLHAQIFKT-LEPNSRFLISRLLF-IYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCT 82
Q+HA K + N +S +L Y + D C+L V + ++I
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL-DLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 83 QNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLY 142
++GL ES+ F++M SG P F VLK+ L DF G+ +HA + G D
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 143 TNNALMNMYAQ 153
N +++ Y++
Sbjct: 287 VGNQILDFYSK 297
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 173 GREASVHEVLDKIPERNGNVELSSGLAGC 201
GR A +++D++P + SS L C
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
>TAIR|locus:2134842 [details] [associations]
symbol:AT4G04370 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161500 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AF069441
IPI:IPI00531168 PIR:C85055 RefSeq:NP_192346.1 UniGene:At.66630
UniGene:At.70894 UniGene:At.74904 ProteinModelPortal:Q9XE98
SMR:Q9XE98 EnsemblPlants:AT4G04370.1 GeneID:825757
KEGG:ath:AT4G04370 GeneFarm:4029 TAIR:At4g04370 eggNOG:NOG258182
HOGENOM:HOG000115634 InParanoid:Q9XE98 OMA:PDQQTFG PhylomeDB:Q9XE98
ProtClustDB:CLSN2685339 Genevestigator:Q9XE98 Uniprot:Q9XE98
Length = 729
Score = 138 (53.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 43/143 (30%), Positives = 66/143 (46%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+ LH QI KT L + L+ +Y S +L+T+ V W +I +
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMR 323
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
G ++L F M+ SG SV+ SC L F G SVH ++R G LD
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 144 NNALMNMYAQSQNMD--MHIYDR 164
N+L+ MYA+ ++D + I++R
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFER 406
Score = 129 (50.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/111 (27%), Positives = 54/111 (48%)
Query: 41 LISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGS 100
+++ +L +Y + V D+ L D ++ V+W ++I G + E L RM G
Sbjct: 181 VMNSMLNLYCKCDHVGDAKDLFDQMEQ-RDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 101 GVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMY 151
G+ PD F + L + D G +H I++ G D+D++ AL+ MY
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY 290
Score = 118 (46.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 74 WKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACII 133
+ S I + +G + L+ F M+ + + PD FPS+LK+C L FG S+H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 134 RLGVDLDLYTNNALMNMYAQ 153
G D Y +++L+N+YA+
Sbjct: 74 VNGFSSDFYISSSLVNLYAK 93
Score = 48 (22.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 156 NMDMHIYDRFQGFGFNGGREASVHEVLDKIPERNGN--VELSSGLAGCNKFEKRVV 209
++DMH+ G+E + + VL+ IP ++ + SGL + EK ++
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 140 DLYTNNALMNMYAQSQNMDM 159
DL + NA+++ YAQ N+D+
Sbjct: 411 DLVSWNAIISGYAQ--NVDL 428
>TAIR|locus:2130644 [details] [associations]
symbol:AT4G15720 "AT4G15720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z97339 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL161542
HOGENOM:HOG000237570 EMBL:AY072074 EMBL:AY096603 IPI:IPI00537442
PIR:D71422 RefSeq:NP_193307.2 UniGene:At.33147 UniGene:At.48860
ProteinModelPortal:Q8VYH0 SMR:Q8VYH0 PRIDE:Q8VYH0
EnsemblPlants:AT4G15720.1 GeneID:827250 KEGG:ath:AT4G15720
GeneFarm:3138 TAIR:At4g15720 eggNOG:NOG266566 InParanoid:Q8VYH0
OMA:DCHEAFK PhylomeDB:Q8VYH0 ProtClustDB:CLSN2690297
Genevestigator:Q8VYH0 Uniprot:Q8VYH0
Length = 616
Score = 137 (53.3 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 37/149 (24%), Positives = 73/149 (48%)
Query: 26 LHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNG 85
LH K + F ++ L+ Y ++ + L D + P V+W S+I G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNV-VSWTSVISGYNDMG 109
Query: 86 LLVESLTCFVRMIGSG-VYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
+L+ F +M V P+ F SV K+C+ L + R G+++HA + G+ ++ +
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 145 NALMNMYAQSQNMDM--HIYDRFQGFGFN 171
++L++MY + +++ ++D G+G N
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRN 198
>TAIR|locus:2057986 [details] [associations]
symbol:AT2G36980 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006922 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 EMBL:AY461626 EMBL:AY461627 IPI:IPI00523229 PIR:A84787
RefSeq:NP_181235.1 UniGene:At.37481 ProteinModelPortal:Q9SJK9
SMR:Q9SJK9 EnsemblPlants:AT2G36980.1 GeneID:818272
KEGG:ath:AT2G36980 GeneFarm:3671 TAIR:At2g36980 eggNOG:NOG289031
HOGENOM:HOG000243248 InParanoid:Q9SJK9 OMA:LTQVSWN PhylomeDB:Q9SJK9
ProtClustDB:CLSN2683956 ArrayExpress:Q9SJK9 Genevestigator:Q9SJK9
Uniprot:Q9SJK9
Length = 625
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V W ++I +NG ++L FV M+ SGV DH + +VL +C+ L G+ +H C
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
+I G Y NAL+N+YA+
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAK 384
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
VAW +++ ++ GL E++ F ++ S PD F ++L +C L + +FG + +
Sbjct: 36 VAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSL 95
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
+IR G L NN+L++MY +
Sbjct: 96 VIRSGFCASLPVNNSLIDMYGK 117
>TAIR|locus:2119440 [details] [associations]
symbol:AT4G13650 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035528 EMBL:AL161537
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BX827423 IPI:IPI00545859 PIR:T05234 RefSeq:NP_193101.2
UniGene:At.50335 ProteinModelPortal:Q9SVP7 SMR:Q9SVP7 PaxDb:Q9SVP7
PRIDE:Q9SVP7 EnsemblPlants:AT4G13650.1 GeneID:826999
KEGG:ath:AT4G13650 GeneFarm:3429 TAIR:At4g13650 eggNOG:NOG244096
InParanoid:Q9SVP7 OMA:YVCNALV PhylomeDB:Q9SVP7
ProtClustDB:CLSN2680966 Genevestigator:Q9SVP7 Uniprot:Q9SVP7
Length = 1064
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+Q+HA+I +S + + L+ +Y+ V + + D L+ +W ++I ++
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SWVAMISGLSK 265
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
N E++ F M G+ P F SVL +C + GE +H +++LG D Y
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 144 NNALMNMYAQSQNM 157
NAL+++Y N+
Sbjct: 326 CNALVSLYFHLGNL 339
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 7 LINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLK 66
L N + ++ + +Q+HAQ + + + L+ +Y+ + +S + +
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 67 TPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGE 126
+AW +++ Q+G E+L FVRM G+ ++ F S +K+ + + + G+
Sbjct: 654 A-GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Query: 127 SVHACIIRLGVDLDLYTNNALMNMYAQ 153
VHA I + G D + NAL++MYA+
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAK 739
Score = 125 (49.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
+ TL +L+ + T + +QLHA K ++ + LL +Y + +L
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF- 447
Query: 64 TLKTPAPPVA-WKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
L+T V W ++ L S F +M + P+ +PS+LK+C L D
Sbjct: 448 -LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDRFQG 167
GE +H+ II+ L+ Y + L++MYA+ +D I RF G
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNL-VHDSLCLLDTLKTPAPPV-AWKSIIR 79
+ ++LH+QI K L +S +S LF + F ++ + + D + P + W +I+
Sbjct: 103 EGRKLHSQILK-LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM--PERTIFTWNKMIK 159
Query: 80 CCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTL-LVDFRFGESVHACIIRLGVD 138
L+ E FVRM+ V P+ F VL++C V F E +HA I+ G+
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 139 LDLYTNNALMNMYAQSQNMDM--HIYD 163
N L+++Y+++ +D+ ++D
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFD 246
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 36/148 (24%), Positives = 69/148 (46%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T ++LK + + +Q+H+QI KT + ++ S L+ +Y + + +L
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V+W ++I TQ ++LT F +M+ G+ D + + +C L + G
Sbjct: 552 -AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQ 153
+ +HA G DL NAL+ +Y++
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSR 638
>TAIR|locus:2118964 [details] [associations]
symbol:EMB2758 "embryo defective 2758" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL031032 EMBL:AL161584 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237570 IPI:IPI00530295 PIR:T05227 RefSeq:NP_567948.1
UniGene:At.65452 ProteinModelPortal:O81767 SMR:O81767 PaxDb:O81767
PRIDE:O81767 EnsemblPlants:AT4G33990.1 GeneID:829546
KEGG:ath:AT4G33990 GeneFarm:3205 TAIR:At4g33990 eggNOG:NOG269748
InParanoid:O81767 OMA:GWSSMEV PhylomeDB:O81767
ProtClustDB:CLSN2917663 Genevestigator:O81767 Uniprot:O81767
Length = 823
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/132 (27%), Positives = 69/132 (52%)
Query: 23 AKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCT 82
AK LHA++ + + + + ++L+ +Y V + D ++ AW +I
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN-RDVYAWNLMISGYG 128
Query: 83 QNGLLVESLTCF-VRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
+ G E + CF + M+ SG+ PD+ FPSVLK+C ++D G +H ++ G D+
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDV 185
Query: 142 YTNNALMNMYAQ 153
Y +L+++Y++
Sbjct: 186 YVAASLIHLYSR 197
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 33/129 (25%), Positives = 70/129 (54%)
Query: 40 FLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPV-AWKSIIRCCTQNGLLVESLTCFVRMI 98
++ + L+ +Y+ + V ++ L D + P + +W ++I Q+G E+LT +
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEM--PVRDMGSWNAMISGYCQSGNAKEALT-----L 238
Query: 99 GSGVYP-DHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
+G+ D S+L +CT DF G ++H+ I+ G++ +L+ +N L+++YA+ +
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 158 -DMH-IYDR 164
D ++DR
Sbjct: 299 RDCQKVFDR 307
>TAIR|locus:2130354 [details] [associations]
symbol:AT4G14820 "AT4G14820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00529570 PIR:C71411
RefSeq:NP_193218.1 UniGene:At.65379 ProteinModelPortal:O23337
SMR:O23337 EnsemblPlants:AT4G14820.1 GeneID:827139
KEGG:ath:AT4G14820 GeneFarm:3141 TAIR:At4g14820 eggNOG:NOG309125
InParanoid:O23337 OMA:VLWHSEK PhylomeDB:O23337
ProtClustDB:CLSN2685361 Genevestigator:O23337 Uniprot:O23337
Length = 722
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 9 NLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTP 68
+LL V++ + + + F+ + + F+ + ++ Y+ + D+ + D +
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 69 APPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESV 128
V W ++I ++ E+L F M SG+ PD SV+ +C L + V
Sbjct: 308 -DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV 366
Query: 129 HACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
H+CI G++ +L NNAL+NMYA+ +D
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLD 396
Score = 124 (48.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 34/154 (22%), Positives = 71/154 (46%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
+ + +LK + + +LH FK F+ + + +Y + ++ + + D +
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
+ V W ++I + GL+ E+ F M S V PD + +++ +C + R+
Sbjct: 173 -SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM 159
+++ +I V +D + AL+ MYA + MDM
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDM 265
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 172 GGREASVHEVLDKIPERN 189
GG +A+ +V +K+P RN
Sbjct: 393 GGLDAT-RDVFEKMPRRN 409
>TAIR|locus:2027554 [details] [associations]
symbol:AT1G56690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004154
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 PROSITE:PS51375 SUPFAM:SSF52954 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00523592 PIR:G96608 RefSeq:NP_176062.1 UniGene:At.66043
ProteinModelPortal:Q9FXB9 PaxDb:Q9FXB9 PRIDE:Q9FXB9
EnsemblPlants:AT1G56690.1 GeneID:842125 KEGG:ath:AT1G56690
GeneFarm:3461 TAIR:At1g56690 eggNOG:NOG302853 InParanoid:Q9FXB9
OMA:TNMIGGL PhylomeDB:Q9FXB9 ProtClustDB:CLSN2912806
Genevestigator:Q9FXB9 Uniprot:Q9FXB9
Length = 704
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 74 WKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACII 133
W+ +I+ + G +E+L F +M GV P S+L C L ++G VHA ++
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 134 RLGVDLDLYTNNALMNMYAQSQNMDMH--IYDRF 165
R D D+Y + LM MY + + ++DRF
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
>TAIR|locus:2018668 [details] [associations]
symbol:AT1G28690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 CAZy:GT77
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC007508
Pfam:PF13041 EMBL:DQ446304 EMBL:DQ652867 IPI:IPI00536155
RefSeq:NP_174190.2 UniGene:At.64385 ProteinModelPortal:Q1PFQ9
SMR:Q1PFQ9 PRIDE:Q1PFQ9 EnsemblPlants:AT1G28690.1 GeneID:839769
KEGG:ath:AT1G28690 GeneFarm:3600 TAIR:At1g28690 eggNOG:NOG291516
HOGENOM:HOG000240077 OMA:SMISGYM PhylomeDB:Q1PFQ9
ProtClustDB:CLSN2680730 Genevestigator:Q1PFQ9 Uniprot:Q1PFQ9
Length = 520
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/155 (22%), Positives = 80/155 (51%)
Query: 15 VSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAW 74
V KS + +F+T++ + + ++ Y N V D+ + +T K V +
Sbjct: 182 VDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK-DIVVY 240
Query: 75 KSIIRCCTQNGLLVE-SLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACII 133
+++ +++G + S+ ++ M +G +P+ + F SV+ +C++L G+ VHA I+
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIM 300
Query: 134 RLGVDLDLYTNNALMNMYAQSQNMD--MHIYDRFQ 166
+ GV + ++L++MYA+ ++ ++D+ Q
Sbjct: 301 KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
>TAIR|locus:2125899 [details] [associations]
symbol:AT4G33170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161583 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035525 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529412 PIR:T05197 RefSeq:NP_195043.1 UniGene:At.65446
ProteinModelPortal:Q9SMZ2 SMR:Q9SMZ2 PRIDE:Q9SMZ2
EnsemblPlants:AT4G33170.1 GeneID:829454 KEGG:ath:AT4G33170
GeneFarm:3439 TAIR:At4g33170 eggNOG:NOG285302 InParanoid:Q9SMZ2
OMA:SGILDMY PhylomeDB:Q9SMZ2 ProtClustDB:CLSN2685477
Genevestigator:Q9SMZ2 Uniprot:Q9SMZ2
Length = 990
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 6 TLINLLKNPVSI-KTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T+ ++LK S+ + S +KQ+H K + F+ + L+ Y+ + ++ L +
Sbjct: 418 TMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER 477
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
VAW +++ TQ+ ++L F M G D +V K+C L
Sbjct: 478 HNFDL--VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
G+ VHA I+ G DLDL+ ++ +++MY + +M
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/153 (25%), Positives = 71/153 (46%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
TL + K + +Q KQ+HA K+ ++ S +L +Y + + D++
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
P VAW ++I C +NG + F +M GV PD ++ K+ + L G
Sbjct: 579 PVP-DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+HA ++L D + +L++MYA+ ++D
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Score = 133 (51.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 38/154 (24%), Positives = 76/154 (49%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISR-LLFIYNNFNLVHDSLCLLDT 64
T I +L V + + + +Q+H K L + +S L+ +Y + + D
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALK-LGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVD-FR 123
+ + ++W S+I QNGL VE++ F++++ G+ PD SVLK+ + L +
Sbjct: 376 M-SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 434
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
+ VH I++ D + + AL++ Y++++ M
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
>TAIR|locus:2049562 [details] [associations]
symbol:AT2G01510 "AT2G01510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC005560
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00535832 PIR:F84425 RefSeq:NP_178260.1 UniGene:At.66150
ProteinModelPortal:Q9ZVF4 SMR:Q9ZVF4 PaxDb:Q9ZVF4 PRIDE:Q9ZVF4
EnsemblPlants:AT2G01510.1 GeneID:814680 KEGG:ath:AT2G01510
GeneFarm:3359 TAIR:At2g01510 eggNOG:NOG303667 InParanoid:Q9ZVF4
OMA:AYSSVEF PhylomeDB:Q9ZVF4 ProtClustDB:CLSN2683536
Genevestigator:Q9ZVF4 Uniprot:Q9ZVF4
Length = 584
Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC--- 60
TK +++ L S K K Q K++HA + +T L+++LL N ++ D +C
Sbjct: 9 TKQMLSELLRASSSKPK-QLKKIHAIVLRTGFSEKNSLLTQLL---ENLVVIGD-MCYAR 63
Query: 61 -LLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLL 119
+ D + P W ++ + +N L ESL + +M GV PD +P V+K+ + L
Sbjct: 64 QVFDEMHKPRI-FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122
Query: 120 VDFRFGESVHACIIRLGVD-LDLYTNNALMNMY 151
DF G ++HA +++ G L + +M MY
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELVM-MY 154
>TAIR|locus:2177537 [details] [associations]
symbol:EMB3141 "AT5G50390" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB012248 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00532811
RefSeq:NP_199850.1 UniGene:At.65663 ProteinModelPortal:Q9FK33
SMR:Q9FK33 EnsemblPlants:AT5G50390.1 GeneID:835107
KEGG:ath:AT5G50390 GeneFarm:3443 TAIR:At5g50390 eggNOG:NOG255376
InParanoid:Q9FK33 OMA:PRAMHYA PhylomeDB:Q9FK33 ProtClustDB:PLN03081
Genevestigator:Q9FK33 Uniprot:Q9FK33
Length = 701
Score = 134 (52.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 38/163 (23%), Positives = 73/163 (44%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
T T +L+ + + KQLH K ++ F+ L+ +Y+ + D+ C +
Sbjct: 224 THTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE 283
Query: 64 TLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFR 123
+ VAW ++I +G E+L M SGV D +++ T L
Sbjct: 284 CMPEKTT-VAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDR 164
+ HA +IR G + ++ N AL++ Y++ +D +++D+
Sbjct: 343 LTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 173 GREASVHEVLDKIPERN 189
GR + V DK+P +N
Sbjct: 374 GRVDTARYVFDKLPRKN 390
>TAIR|locus:2056740 [details] [associations]
symbol:OTP85 "ORGANELLE TRANSCRIPT PROCESSING 85"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0016556 "mRNA
modification" evidence=RCA] InterPro:IPR011990 EMBL:AC004138
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0031425 HOGENOM:HOG000237569
EMBL:AF517844 IPI:IPI00532421 PIR:H84442 RefSeq:NP_178398.1
UniGene:At.41442 ProteinModelPortal:Q8LK93 SMR:Q8LK93 PaxDb:Q8LK93
PRIDE:Q8LK93 EnsemblPlants:AT2G02980.1 GeneID:814827
KEGG:ath:AT2G02980 GeneFarm:3321 TAIR:At2g02980 eggNOG:NOG294028
InParanoid:O80613 OMA:PTLINMY PhylomeDB:Q8LK93
ProtClustDB:CLSN2683708 Genevestigator:Q8LK93 Uniprot:Q8LK93
Length = 603
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 88 VESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNAL 147
+E + FV ++ G+ PD+ FPS+LK+C + G +H ++LG+D ++Y L
Sbjct: 111 LEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTL 170
Query: 148 MNMYAQSQNMDMH--IYDR 164
+NMY + +++D ++DR
Sbjct: 171 INMYTECEDVDSARCVFDR 189
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T +LLK K + +QLH K ++ ++ L+ +Y V + C+ D +
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
P V + ++I + E+L+ F M G + P+ SVL SC LL G
Sbjct: 191 VEPCV-VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD--MHIYDRFQ 166
+ +H + + N AL++M+A+ ++D + I+++ +
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
>TAIR|locus:2059687 [details] [associations]
symbol:AT2G17210 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC007127 Pfam:PF13041
IPI:IPI00518475 IPI:IPI01019973 PIR:D84549 RefSeq:NP_179312.1
UniGene:At.66215 ProteinModelPortal:Q9SII7 SMR:Q9SII7 GeneID:816226
KEGG:ath:AT2G17210 GeneFarm:3688 TAIR:At2g17210 eggNOG:NOG312556
HOGENOM:HOG000093021 InParanoid:Q9SII7 PhylomeDB:Q9SII7
ProtClustDB:CLSN2683785 ArrayExpress:Q9SII7 Genevestigator:Q9SII7
Uniprot:Q9SII7
Length = 736
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSG-VYPDHNVFPSVLKSCTLLVDFRFGESVHA 130
++W +IR Q+ V L F M+ PD SVLK+CT++ D G SVH
Sbjct: 212 ISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHG 271
Query: 131 CIIRLGVDL-DLYTNNALMNMYAQSQNMD--MHIYD 163
IR G DL D++ N+L++MY++ ++D ++D
Sbjct: 272 FSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFD 307
>TAIR|locus:2102852 [details] [associations]
symbol:CRR2 "AT3G46790" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISS] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0031426
"polycistronic mRNA processing" evidence=IMP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AL096859 GO:GO:0031425 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AK226825 IPI:IPI00546099 PIR:T12969
RefSeq:NP_190263.1 UniGene:At.3629 ProteinModelPortal:Q9STF3
SMR:Q9STF3 STRING:Q9STF3 PRIDE:Q9STF3 EnsemblPlants:AT3G46790.1
GeneID:823832 KEGG:ath:AT3G46790 GeneFarm:3440 TAIR:At3g46790
eggNOG:NOG277232 InParanoid:Q9STF3 OMA:WSAMIAC PhylomeDB:Q9STF3
ProtClustDB:CLSN2685130 Genevestigator:Q9STF3 GO:GO:0031426
Uniprot:Q9STF3
Length = 657
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/167 (23%), Positives = 79/167 (47%)
Query: 2 TSTKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCL 61
T T L + + ++ + K++HA + + + ++++ L+ +Y F V + +
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 62 LDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGS--GVYPDHNVFPSVLKSCTLL 119
+ V+W ++I C +NG E+L F M+ P+ SVL++C L
Sbjct: 240 FGGMPV-RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 120 VDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM--HIYDR 164
G+ +H I+R G+D L +AL+ MY + +++ ++DR
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
>TAIR|locus:2090444 [details] [associations]
symbol:AT3G22150 "AT3G22150" species:3702 "Arabidopsis
thaliana" [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AP001306 Pfam:PF13041
EMBL:AK229803 IPI:IPI00524640 RefSeq:NP_188854.1 UniGene:At.37924
ProteinModelPortal:Q9LIE7 SMR:Q9LIE7 EnsemblPlants:AT3G22150.1
GeneID:821779 KEGG:ath:AT3G22150 GeneFarm:3869 TAIR:At3g22150
eggNOG:NOG291997 HOGENOM:HOG000241004 InParanoid:Q9LIE7 OMA:EVWNTMI
PhylomeDB:Q9LIE7 ProtClustDB:CLSN2685299 Genevestigator:Q9LIE7
Uniprot:Q9LIE7
Length = 820
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/155 (30%), Positives = 73/155 (47%)
Query: 14 PVSIKTKSQAKQLHAQIFK--TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPP 71
P+S+++ SQ + H+ F TL P + + SRL I + N + L D + P
Sbjct: 13 PLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGN-PQLARQLFDAIPKPTT- 70
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYP--DHNVFPSVLKSCTLLVDFRFGESVH 129
V W +II N L E+L + RM + + D + S LK+C + + G++VH
Sbjct: 71 VLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVH 130
Query: 130 ACIIRLGVDLDLYTNNALMNMYAQSQNM-DMHIYD 163
+IR + +N+LMNMY N D YD
Sbjct: 131 CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Score = 131 (51.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 40/170 (23%), Positives = 81/170 (47%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+Q H + K +++ L+ +Y+ VH S + +++ V+W ++I Q
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMISAFVQ 396
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
NGL E L M G D+ ++L + + L + G+ HA +IR G+ +
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GM 455
Query: 144 NNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASVHEVLDKIPERNGNVE 193
N+ L++MY++S + + F+G G+ +A+ + ++ + NG+ E
Sbjct: 456 NSYLIDMYSKSGLIRIS-QKLFEGSGYAERDQATWNSMISGYTQ-NGHTE 503
Score = 124 (48.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 36/150 (24%), Positives = 72/150 (48%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD-T 64
T+ LL +++ K KQ HA + + + S L+ +Y+ L+ S L + +
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQFEGMNSYLIDMYSKSGLIRISQKLFEGS 479
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
W S+I TQNG ++ F +M+ + P+ S+L +C+ +
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL 539
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQS 154
G+ +H IR +D +++ +AL++MY+++
Sbjct: 540 GKQLHGFSIRQYLDQNVFVASALVDMYSKA 569
>TAIR|locus:2206164 [details] [associations]
symbol:AT1G31430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC027135 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518213 PIR:C86440 RefSeq:NP_174428.1
UniGene:At.40342 UniGene:At.5353 ProteinModelPortal:Q9C866
SMR:Q9C866 PaxDb:Q9C866 EnsemblPlants:AT1G31430.1 GeneID:840033
KEGG:ath:AT1G31430 GeneFarm:3605 TAIR:At1g31430 eggNOG:NOG280522
InParanoid:Q9C866 OMA:NGYVQFN PhylomeDB:Q9C866
ProtClustDB:CLSN2682384 Genevestigator:Q9C866 Uniprot:Q9C866
Length = 570
Score = 132 (51.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 62 LDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVD 121
+ L+TP+ + + +++ + L F + G G+YPD+ P VLKS L
Sbjct: 3 MSLLQTPSL-LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK 61
Query: 122 FRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDM-H-IYD 163
GE VH ++ G++ D Y +N+LM MYA +++ H ++D
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFD 105
>TAIR|locus:2150690 [details] [associations]
symbol:EMB175 "AT5G03800" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;NAS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL162873 EMBL:AB005235 GO:GO:0009793
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AY864345 EMBL:AY864346 EMBL:AK117204 IPI:IPI00535493
PIR:T48407 RefSeq:NP_196000.2 UniGene:At.63783
ProteinModelPortal:Q9FFN1 SMR:Q9FFN1 EnsemblPlants:AT5G03800.1
GeneID:831717 KEGG:ath:AT5G03800 GeneFarm:3198 TAIR:At5g03800
eggNOG:NOG285897 HOGENOM:HOG000242153 InParanoid:Q9FFN1 OMA:TEMITAY
PhylomeDB:Q9FFN1 ProtClustDB:CLSN2681629 Genevestigator:Q9FFN1
Uniprot:Q9FFN1
Length = 896
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 34/129 (26%), Positives = 67/129 (51%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
K +HA K E +R L + L+ Y +++ + +L +P V++ ++I ++
Sbjct: 100 KAVHASFLKLREEKTR-LGNALISTYLKLGFPREAILVFVSLSSPTV-VSYTALISGFSR 157
Query: 84 NGLLVESLTCFVRMIGSG-VYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLY 142
L +E+L F RM +G V P+ F ++L +C + F G +H I++ G ++
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVF 217
Query: 143 TNNALMNMY 151
+N+LM++Y
Sbjct: 218 VSNSLMSLY 226
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 44/158 (27%), Positives = 74/158 (46%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYN--NFNLVHDSLCLLD 63
T + +L V + S Q+H I K+ NS F+ + L+ +Y+ + + D L L D
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFD 242
Query: 64 TLKTPAPPVA-WKSIIRCCTQNGLLVESLTCFV---RMIGSGVYPDHNVFPSVLKSCTLL 119
+ P VA W +++ + G ++ F R+ G GV D ++L SCT
Sbjct: 243 EI--PQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTDS 298
Query: 120 VDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
G +H IR+G+ +L NNAL+ Y++ +M
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDM 336
>TAIR|locus:2096299 [details] [associations]
symbol:AT3G05340 "AT3G05340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC009177 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546900 RefSeq:NP_187185.2
UniGene:At.49589 UniGene:At.65776 ProteinModelPortal:Q9MA85
SMR:Q9MA85 EnsemblPlants:AT3G05340.1 GeneID:819698
KEGG:ath:AT3G05340 GeneFarm:3700 TAIR:At3g05340 eggNOG:NOG237313
InParanoid:Q9MA85 OMA:FARHGHG PhylomeDB:Q9MA85
ProtClustDB:CLSN2680820 Genevestigator:Q9MA85 Uniprot:Q9MA85
Length = 658
Score = 132 (51.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 34/132 (25%), Positives = 68/132 (51%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCC 81
+ +Q+HA ++K + + S L+ +Y+ + D+ + ++ T V+ I+
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST-TEVDEVSMTVILVGL 332
Query: 82 TQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
QNG E++ F+RM+ +GV D NV +VL + G+ +H+ +I+ +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 142 YTNNALMNMYAQ 153
+ NN L+NMY++
Sbjct: 393 FVNNGLINMYSK 404
>TAIR|locus:2077878 [details] [associations]
symbol:AT3G08820 "AT3G08820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AC012562
PROSITE:PS51375 EMBL:AC010871 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00518512
RefSeq:NP_187494.1 UniGene:At.65071 ProteinModelPortal:Q9SR82
SMR:Q9SR82 PaxDb:Q9SR82 PRIDE:Q9SR82 EnsemblPlants:AT3G08820.1
GeneID:820029 KEGG:ath:AT3G08820 GeneFarm:3532 TAIR:At3g08820
eggNOG:NOG303126 InParanoid:Q9SR82 OMA:LIALEPW PhylomeDB:Q9SR82
ProtClustDB:CLSN2684962 Genevestigator:Q9SR82 Uniprot:Q9SR82
Length = 685
Score = 132 (51.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 58/230 (25%), Positives = 103/230 (44%)
Query: 3 STKTLINLLKNPVSIK-TKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCL 61
S + + +K +S+ T + KQ+H + + FL++ LL F S L
Sbjct: 8 SATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLL 67
Query: 62 LDTLKTPAPPV-AWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLV 120
T P + + S+I N L E+L F+ + G+Y FP VLK+CT
Sbjct: 68 FS--HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125
Query: 121 DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM-DMH-IYDRFQGFG-------FN 171
+ G +H+ +++ G + D+ +L+++Y+ S + D H ++D F+
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 172 GGREASVH-EVLDKIPERNGNVELSSGLAGCNKFEKRVVSAG-HDADLDA 219
G + H E +D + VE+ G+ + F +V+SA H DLD+
Sbjct: 186 GYTTSGRHREAIDLFKKM---VEM--GVKPDSYFIVQVLSACVHVGDLDS 230
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
+LK ++ LH+ + K + ++ LL IY+ ++D+ L D + +
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
V W ++ T +G E++ F +M+ GV PD VL +C + D GE +
Sbjct: 177 V-VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 130 ACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+ + + + + L+N+YA+ M+
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
>TAIR|locus:2019130 [details] [associations]
symbol:OTP87 "organelle transcript processing 87"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0080156 "mitochondrial mRNA modification" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00548519 PIR:B96775
RefSeq:NP_177599.1 UniGene:At.34861 ProteinModelPortal:Q9CA56
SMR:Q9CA56 PRIDE:Q9CA56 EnsemblPlants:AT1G74600.1 GeneID:843800
KEGG:ath:AT1G74600 GeneFarm:3629 TAIR:At1g74600 eggNOG:NOG278390
HOGENOM:HOG000243138 InParanoid:Q9CA56 OMA:SYAQHGK PhylomeDB:Q9CA56
ProtClustDB:CLSN2682261 ArrayExpress:Q9CA56 Genevestigator:Q9CA56
GO:GO:0080156 Uniprot:Q9CA56
Length = 895
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
KQ+H K+ + S L +Y+ + +S L + W S+I +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNE 528
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
G L E++ F M+ G PD + +VL C+ G+ +H +R G+D +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 144 NNALMNMYAQSQNMDM--HIYDR 164
+AL+NMY++ ++ + +YDR
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDR 611
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCC 81
+ K++H + L S L+ +Y+ + + + D L PV+ S+I
Sbjct: 569 RGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE-LDPVSCSSLISGY 627
Query: 82 TQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
+Q+GL+ + F M+ SG D S+LK+ L + G VHA I ++G+ +
Sbjct: 628 SQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEP 687
Query: 142 YTNNALMNMYAQSQNMD 158
++L+ MY++ ++D
Sbjct: 688 SVGSSLLTMYSKFGSID 704
>TAIR|locus:2007888 [details] [associations]
symbol:AT1G17630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022492 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00541865 RefSeq:NP_173207.1 UniGene:At.51653
ProteinModelPortal:Q9LNP2 SMR:Q9LNP2 PaxDb:Q9LNP2 PRIDE:Q9LNP2
EnsemblPlants:AT1G17630.1 GeneID:838340 KEGG:ath:AT1G17630
GeneFarm:3636 TAIR:At1g17630 eggNOG:NOG260559 InParanoid:Q9LNP2
OMA:REIHGHV PhylomeDB:Q9LNP2 ProtClustDB:CLSN2682102
Genevestigator:Q9LNP2 Uniprot:Q9LNP2
Length = 731
Score = 132 (51.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 19 TKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTP--APPVAWK 75
T Q +Q+HAQ+ + S L + L+ +Y L+ D+ + +T+ + W
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 76 SIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
SI++ +GL +L + M G+ D + P +L++C L F + H +I++
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 136 GVDLDLYTNNALMNMYAQSQNM 157
G+ +L+ N L+ +Y ++ M
Sbjct: 188 GLKENLHVVNELLTLYPKAGRM 209
>TAIR|locus:2144143 [details] [associations]
symbol:AT5G06540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AP002543 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 HOGENOM:HOG000237569
IPI:IPI00525372 RefSeq:NP_196272.1 UniGene:At.65494
ProteinModelPortal:Q9FG16 SMR:Q9FG16 PRIDE:Q9FG16
EnsemblPlants:AT5G06540.1 GeneID:830542 KEGG:ath:AT5G06540
GeneFarm:3536 TAIR:At5g06540 eggNOG:NOG262142 InParanoid:Q9FG16
OMA:SIMINGY PhylomeDB:Q9FG16 ProtClustDB:CLSN2686880
ArrayExpress:Q9FG16 Genevestigator:Q9FG16 Uniprot:Q9FG16
Length = 622
Score = 131 (51.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 38/144 (26%), Positives = 73/144 (50%)
Query: 16 SIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFI------YNN-FNLVHDSLCLLDTLKTP 68
S + S K +H + +T + F+ SRLL + +N NL+ + + ++ P
Sbjct: 21 SCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNP 80
Query: 69 APPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESV 128
V + +IRC + ++ + +M+ S ++PD+ FP ++K+ + + GE
Sbjct: 81 NLFV-FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 129 HACIIRLGVDLDLYTNNALMNMYA 152
H+ I+R G D+Y N+L++MYA
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYA 163
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 39/149 (26%), Positives = 73/149 (48%)
Query: 77 IIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLG 136
+IRC + ++ + +M+ S ++PD+ FP ++K+ + + GE H+ I+R G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 137 VDLDLYTNNALMNMYAQSQNMDM--HIYDRFQGF-----------GF-NGGREASVHEVL 182
D+Y N+L++MYA + I+ + GF G+ G + E+
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQM-GFRDVVSWTSMVAGYCKCGMVENAREMF 206
Query: 183 DKIPERN---GNVELSSGLAGCNKFEKRV 208
D++P RN ++ ++ G A N FEK +
Sbjct: 207 DEMPHRNLFTWSIMIN-GYAKNNCFEKAI 234
>TAIR|locus:2060640 [details] [associations]
symbol:OTP81 "ORGANELLE TRANSCRIPT PROCESSING 81"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC005496 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.38446 UniGene:At.49361 GO:GO:0031425
HOGENOM:HOG000237569 EMBL:AY500319 IPI:IPI00520465 PIR:C84700
RefSeq:NP_180537.1 ProteinModelPortal:O82380 SMR:O82380
PRIDE:O82380 EnsemblPlants:AT2G29760.1 GeneID:817526
KEGG:ath:AT2G29760 GeneFarm:3355 TAIR:At2g29760 eggNOG:NOG235387
InParanoid:O82380 OMA:FVWSAMI PhylomeDB:O82380
ProtClustDB:CLSN2683829 Genevestigator:O82380 Uniprot:O82380
Length = 738
Score = 131 (51.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/194 (23%), Positives = 87/194 (44%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
L+K + + S + LH K+ + F+ + L+ Y + + DS C + T
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL-DSACKVFTTIKEK 195
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
V+W S+I Q G ++L F +M V H VL +C + + FG V
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 130 ACIIRLGVDLDLYTNNALMNMYAQSQNMD--MHIYDRFQ------------GFGFNGGRE 175
+ I V+++L NA+++MY + +++ ++D + G+ + E
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 176 ASVHEVLDKIPERN 189
A+ EVL+ +P+++
Sbjct: 316 AA-REVLNSMPQKD 328
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/154 (24%), Positives = 75/154 (48%)
Query: 8 INLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFI--YNNFNLVHDSLCLLDTL 65
I+L++ VS++ Q KQ H + +T + + S+L + ++F + + + D +
Sbjct: 34 ISLIERCVSLR---QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIG-SGVYPDHNVFPSVLKSCTLLVDFRF 124
P AW ++IR V S+ F+ M+ S YP+ FP ++K+ +
Sbjct: 91 PKPNS-FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G+S+H ++ V D++ N+L++ Y ++D
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 183
>TAIR|locus:2178188 [details] [associations]
symbol:MEF7 "AT5G09950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016893 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524906
RefSeq:NP_196557.1 UniGene:At.65502 ProteinModelPortal:Q9FIB2
SMR:Q9FIB2 PaxDb:Q9FIB2 PRIDE:Q9FIB2 EnsemblPlants:AT5G09950.1
GeneID:830856 KEGG:ath:AT5G09950 GeneFarm:3357 TAIR:At5g09950
eggNOG:NOG278872 InParanoid:Q9FIB2 OMA:SGYIHNE PhylomeDB:Q9FIB2
ProtClustDB:CLSN2687521 Genevestigator:Q9FIB2 Uniprot:Q9FIB2
Length = 995
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 67 TPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGE 126
T V+W S+I QNG +E++ + M + P S L SC L + G+
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 127 SVHACIIRLGVDLDLYTNNALMNMYAQS 154
+H ++LG+DL++ +NALM +YA++
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAET 463
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 33/135 (24%), Positives = 65/135 (48%)
Query: 20 KSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIR 79
+ A+ H++++K +L + L+ Y + + D + V+W I+
Sbjct: 17 RGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL-RNCVSWACIVS 75
Query: 80 CCTQNGLLVESLTCFVR-MIGSGVYPDHNVFPSVLKSCTLL--VDFRFGESVHACIIRLG 136
++NG E+L F+R M+ G++ + F SVL++C + V FG +H + +L
Sbjct: 76 GYSRNGEHKEALV-FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 137 VDLDLYTNNALMNMY 151
+D +N L++MY
Sbjct: 135 YAVDAVVSNVLISMY 149
>TAIR|locus:2176927 [details] [associations]
symbol:AT5G52850 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 EMBL:AB009055 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 UniGene:At.29591 UniGene:At.66774
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00540501
RefSeq:NP_200097.1 ProteinModelPortal:Q9FLX6 SMR:Q9FLX6
EnsemblPlants:AT5G52850.1 GeneID:835362 KEGG:ath:AT5G52850
GeneFarm:3328 TAIR:At5g52850 eggNOG:NOG265214 InParanoid:Q9FLX6
OMA:NEFTFVK PhylomeDB:Q9FLX6 ProtClustDB:CLSN2686138
Genevestigator:Q9FLX6 Uniprot:Q9FLX6
Length = 893
Score = 131 (51.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 39/159 (24%), Positives = 79/159 (49%)
Query: 1 MTSTKTLINLLKNPVSIKT--KSQAKQL----HAQIFKTLEPNSRFLISRLLFIYNNFNL 54
++ T L NL K+ + I + +S + ++ H + K + L + LL +Y +
Sbjct: 14 LSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDG 73
Query: 55 VHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLK 114
+ ++ L D + + AW +I T++ +L+ F M+ SG +P+ F SV++
Sbjct: 74 IWNARKLFDEM-SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 115 SCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
SC L D +G VH +I+ G + + ++L ++Y++
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSK 171
Score = 124 (48.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 30/128 (23%), Positives = 65/128 (50%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
K +H+ I P + L + L+ Y+ F+ + D++ +L++ W S++ +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSGFVR 302
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
N E++ F+ M G+ P++ + ++L C+ + FG+ +H+ I++G +
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 144 NNALMNMY 151
NAL++MY
Sbjct: 363 GNALVDMY 370
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 36/154 (23%), Positives = 76/154 (49%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKT-LEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T +++++ ++ S ++H + KT E NS + S L +Y+ ++ L +
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS-VVGSSLSDLYSKCGQFKEACELFSS 184
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
L+ A ++W +I E+L + M+ +GV P+ F +L + + L F
Sbjct: 185 LQN-ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEF 242
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G+++H+ II G+ L++ +L++ Y+Q M+
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
>TAIR|locus:2014270 [details] [associations]
symbol:AT1G64310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC066689 Pfam:PF13041 IPI:IPI00517625
PIR:A96667 RefSeq:NP_176613.1 UniGene:At.66094
ProteinModelPortal:Q9C7V5 SMR:Q9C7V5 EnsemblPlants:AT1G64310.1
GeneID:842737 KEGG:ath:AT1G64310 GeneFarm:3624 TAIR:At1g64310
eggNOG:NOG241939 HOGENOM:HOG000082882 InParanoid:Q9C7V5 OMA:CVLRACA
PhylomeDB:Q9C7V5 ProtClustDB:CLSN2682638 Genevestigator:Q9C7V5
Uniprot:Q9C7V5
Length = 552
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/149 (28%), Positives = 76/149 (51%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFK-TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T++ L + A +HA K L+ +S ++ L+ +Y+ + + + ++
Sbjct: 209 TMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS-YVGCALVNMYSRCMCIASACSVFNS 267
Query: 65 LKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
+ P VA S+I ++ G E+L F + SG PD + VL SC L D
Sbjct: 268 ISEP-DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVS 326
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G+ VH+ +IRLG++LD+ +AL++MY++
Sbjct: 327 GKEVHSYVIRLGLELDIKVCSALIDMYSK 355
>TAIR|locus:2045580 [details] [associations]
symbol:AT2G42920 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006580 EMBL:AC006931 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229283
IPI:IPI00518122 PIR:H84859 RefSeq:NP_181820.1 UniGene:At.73075
ProteinModelPortal:Q9SJG6 SMR:Q9SJG6 PaxDb:Q9SJG6 PRIDE:Q9SJG6
EnsemblPlants:AT2G42920.1 GeneID:818893 KEGG:ath:AT2G42920
GeneFarm:3678 TAIR:At2g42920 eggNOG:NOG237883 InParanoid:Q9SJG6
OMA:NYAYLVF PhylomeDB:Q9SJG6 ProtClustDB:CLSN2683945
Genevestigator:Q9SJG6 Uniprot:Q9SJG6
Length = 559
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S T + L+ S T + KQ+HA + KT + SR+L + L+
Sbjct: 23 SGNTYLRLIDTQCS--TMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLV 80
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSG--VYPDHNVFPSVLKSCTLLV 120
T P W +IIR +++ +++ F+ M+ S V P +PSV K+ L
Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Query: 121 DFRFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM--DMHIYDRFQGF---------- 168
R G +H +I+ G++ D + N +++MY + I+ GF
Sbjct: 141 QARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIM 200
Query: 169 GF-NGGREASVHEVLDKIPERNGNVELSSGLAG 200
GF G + D++P+RNG V +S ++G
Sbjct: 201 GFAKCGLIDQAQNLFDEMPQRNG-VSWNSMISG 232
>TAIR|locus:2020703 [details] [associations]
symbol:AT1G03540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002560 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:DQ446225 IPI:IPI00544838
PIR:T00904 RefSeq:NP_171853.1 UniGene:At.51470
ProteinModelPortal:Q9LR69 SMR:Q9LR69 PRIDE:Q9LR69
EnsemblPlants:AT1G03540.1 GeneID:839466 KEGG:ath:AT1G03540
GeneFarm:3641 TAIR:At1g03540 eggNOG:NOG295682 HOGENOM:HOG000241954
InParanoid:Q9LR69 OMA:LGGYCQN PhylomeDB:Q9LR69
ProtClustDB:CLSN2679681 Genevestigator:Q9LR69 Uniprot:Q9LR69
Length = 609
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 38 SRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRM 97
+ F+ S L ++Y D+ + D + P + W +++ ++N L E+L F M
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEMPEP-DVICWTAVLSAFSKNDLYEEALGLFYAM 255
Query: 98 I-GSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G G+ PD + F +VL +C L + G+ +H +I G+ ++ ++L++MY +
Sbjct: 256 HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK 312
>TAIR|locus:2049726 [details] [associations]
symbol:AT2G37310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC005896 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK230376
IPI:IPI00523165 PIR:B84791 RefSeq:NP_181268.1 UniGene:At.51341
ProteinModelPortal:Q9ZUT5 SMR:Q9ZUT5 PRIDE:Q9ZUT5
EnsemblPlants:AT2G37310.1 GeneID:818308 KEGG:ath:AT2G37310
GeneFarm:3673 TAIR:At2g37310 eggNOG:NOG272931 HOGENOM:HOG000090695
InParanoid:Q9ZUT5 OMA:AYGHLIQ PhylomeDB:Q9ZUT5
ProtClustDB:CLSN2683974 Genevestigator:Q9ZUT5 Uniprot:Q9ZUT5
Length = 657
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/144 (26%), Positives = 70/144 (48%)
Query: 25 QLHAQIFK-TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
QLHA+I +++P++ FL S+L+ Y + +L + D + T ++ +++ T
Sbjct: 43 QLHARIVVFSIKPDN-FLASKLISFYTRQDRFRQALHVFDEI-TVRNAFSYNALLIAYTS 100
Query: 84 NGLLVESLTCFVRMIGSGVY------PDHNVFPSVLKSCTLLVDFRFGE---SVHACIIR 134
+ ++ + F+ IGS Y PD VLK+ + DF G VH +IR
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 135 LGVDLDLYTNNALMNMYAQSQNMD 158
G D D++ N ++ Y + N++
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIE 184
>TAIR|locus:2080727 [details] [associations]
symbol:MEF10 "mitochondrial RNA editing factor 10"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008153 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00530970
RefSeq:NP_187753.1 UniGene:At.53270 ProteinModelPortal:Q9CAY1
SMR:Q9CAY1 PaxDb:Q9CAY1 PRIDE:Q9CAY1 EnsemblPlants:AT3G11460.1
GeneID:820319 KEGG:ath:AT3G11460 GeneFarm:3438 TAIR:At3g11460
eggNOG:NOG330951 InParanoid:Q9CAY1 OMA:GLITWNA PhylomeDB:Q9CAY1
ProtClustDB:CLSN2684416 Genevestigator:Q9CAY1 Uniprot:Q9CAY1
Length = 623
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+ LH Q K + +++ + +Y V L D + + W ++I +Q
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL-ITWNAVISGYSQ 234
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYT 143
NGL + L + +M SGV PD SVL SC L + G V + G +++
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 144 NNALMNMYAQSQNM 157
+NA ++MYA+ N+
Sbjct: 295 SNASISMYARCGNL 308
>TAIR|locus:2154965 [details] [associations]
symbol:AT5G66500 "AT5G66500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:BX832684 IPI:IPI00521956 RefSeq:NP_201451.1 UniGene:At.49810
UniGene:At.75650 ProteinModelPortal:Q9FJY9 SMR:Q9FJY9 PRIDE:Q9FJY9
EnsemblPlants:AT5G66500.1 GeneID:836782 KEGG:ath:AT5G66500
GeneFarm:4202 TAIR:At5g66500 eggNOG:NOG277507 InParanoid:Q9FJY9
OMA:TSMIDAY PhylomeDB:Q9FJY9 ProtClustDB:CLSN2686843
Genevestigator:Q9FJY9 Uniprot:Q9FJY9
Length = 532
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/148 (27%), Positives = 71/148 (47%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
TL +++K S+K Q KQ+HA + T + L + ++ Y++ L+++++ + ++L
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSL 245
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V S+I C +N E+ F+ M S P+ V S L C+ D G
Sbjct: 246 NVHTDEVMLNSLISGCIRNRNYKEA---FLLM--SRQRPNVRVLSSSLAGCSDNSDLWIG 300
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQ 153
+ +H +R G D N LM+MY +
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 46/190 (24%), Positives = 86/190 (45%)
Query: 24 KQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQ 83
+Q+HA + K + L+ +Y+ + + DS+ + ++++ V+W +++ +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEK-DLVSWNALLSGFLR 162
Query: 84 NGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDL---- 139
NG E+L F M V SV+K+C L + G+ VHA ++ G DL
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG 222
Query: 140 ----DLYTNNALMNMYAQSQN-MDMHIYDRFQGFGFNGG-REASVHEVLDKIPERNGNVE 193
Y++ L+N + N +++H + +G R + E + + NV
Sbjct: 223 TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVR 282
Query: 194 -LSSGLAGCN 202
LSS LAGC+
Sbjct: 283 VLSSSLAGCS 292
>TAIR|locus:2062939 [details] [associations]
symbol:AT2G46050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005397 Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00535852
PIR:B84898 RefSeq:NP_182129.1 UniGene:At.65051
ProteinModelPortal:O82363 SMR:O82363 PRIDE:O82363
EnsemblPlants:AT2G46050.1 GeneID:819213 KEGG:ath:AT2G46050
GeneFarm:3686 TAIR:At2g46050 eggNOG:NOG298418 HOGENOM:HOG000242240
InParanoid:O82363 OMA:QHLACLV PhylomeDB:O82363
ProtClustDB:CLSN2683448 Genevestigator:O82363 Uniprot:O82363
Length = 590
Score = 116 (45.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCC 81
Q KQ+HA +FK + + LL +Y N + D+ +++ V+W ++I
Sbjct: 259 QGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVV-RNVVSWNAMIVGF 317
Query: 82 TQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
QNG E++ F +M+ + PD F SVL SC + V A + + G L
Sbjct: 318 AQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFL 377
Query: 142 YTNNALMNMYAQSQNM 157
N+L++ Y+++ N+
Sbjct: 378 SVANSLISSYSRNGNL 393
Score = 113 (44.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 36/154 (23%), Positives = 73/154 (47%)
Query: 7 LINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLK 66
LI L + ++K QLH + K +S F + L+ Y L+ ++ + + +
Sbjct: 148 LIRLCTDSTNMKA---GIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV- 203
Query: 67 TPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSG---VYPDHNVFPSVLKSCTLLVDFR 123
V W +++ NG++ E+ ++++GS D+ F S+L +C +
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFG-LLKLMGSDKNRFRGDYFTFSSLLSACRI----E 258
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNM 157
G+ +HA + ++ D+ AL+NMYA+S ++
Sbjct: 259 QGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 175 EASVHEVLDKIPERNGNVELSSGLAGCNKFEKR 207
EAS +VL+ +P L++ GCN EKR
Sbjct: 496 EAS--DVLNSMPTEPSTHALAAFTGGCNIHEKR 526
>TAIR|locus:2126352 [details] [associations]
symbol:AT4G37380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161591
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035601 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00520306 PIR:T04732 RefSeq:NP_195454.1 UniGene:At.65465
ProteinModelPortal:Q9SZT8 SMR:Q9SZT8 PaxDb:Q9SZT8 PRIDE:Q9SZT8
EnsemblPlants:AT4G37380.1 GeneID:829892 KEGG:ath:AT4G37380
GeneFarm:3434 TAIR:At4g37380 eggNOG:NOG309820 InParanoid:Q9SZT8
OMA:MITCYAK PhylomeDB:Q9SZT8 ProtClustDB:CLSN2685788
BioCyc:ARA:AT4G37830-MONOMER BioCyc:MetaCyc:AT4G37830-MONOMER
Genevestigator:Q9SZT8 Uniprot:Q9SZT8
Length = 632
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/146 (25%), Positives = 73/146 (50%)
Query: 25 QLHAQIFK---TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPV-AWKSIIRC 80
Q+HA I + L P L +L Y + + SL L +T P + + + I
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFH--QTIDPDLFLFTAAINT 104
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
+ NGL ++ +V+++ S + P+ F S+LKSC+ + G+ +H +++ G+ +D
Sbjct: 105 ASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGID 160
Query: 141 LYTNNALMNMYAQSQNM--DMHIYDR 164
Y L+++YA+ ++ ++DR
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDR 186
>TAIR|locus:2148393 [details] [associations]
symbol:AT5G59600 "AT5G59600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025604 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006705
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BT023730 IPI:IPI00528168
RefSeq:NP_200768.1 UniGene:At.29216 UniGene:At.75622
ProteinModelPortal:Q9FGR2 SMR:Q9FGR2 EnsemblPlants:AT5G59600.1
GeneID:836079 KEGG:ath:AT5G59600 GeneFarm:4200 TAIR:At5g59600
eggNOG:NOG312104 InParanoid:Q9FGR2 OMA:DLFVWGA
ProtClustDB:CLSN2686476 Genevestigator:Q9FGR2 Uniprot:Q9FGR2
Length = 534
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 22 QAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSI-IRC 80
+ + LHA + + + ++L+ Y V D+ + D + P ++ + I
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM--PKRDISGCVVMIGA 91
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
C +NG ESL F M G+ D + PS+LK+ L+D FG+ +H +++ + D
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 141 LYTNNALMNMYAQ 153
+ ++L++MY++
Sbjct: 152 AFIVSSLIDMYSK 164
>TAIR|locus:2098670 [details] [associations]
symbol:AT3G50420 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.20758 EMBL:AL133363 Pfam:PF13041 IPI:IPI00521058
PIR:T46073 RefSeq:NP_190611.1 UniGene:At.53874
ProteinModelPortal:Q9SCT2 SMR:Q9SCT2 PRIDE:Q9SCT2
EnsemblPlants:AT3G50420.1 GeneID:824206 KEGG:ath:AT3G50420
GeneFarm:4236 TAIR:At3g50420 eggNOG:NOG286613 HOGENOM:HOG000241114
InParanoid:Q9SCT2 OMA:PDLKCWN PhylomeDB:Q9SCT2
ProtClustDB:CLSN2684412 Genevestigator:Q9SCT2 Uniprot:Q9SCT2
Length = 794
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 39/160 (24%), Positives = 75/160 (46%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
++ T +L++ ++ L++QI K ++ + + +L +Y++ + + +
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
D + VAW ++I +N + + L F M+ SGV P + VL C+ L +
Sbjct: 258 DCVNN-RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 123 RFGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMDMHIY 162
G+ +HA II DL +NAL++MY +M Y
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY 356
>TAIR|locus:2202074 [details] [associations]
symbol:CRR22 "CHLORORESPIRATORY REDUCTION22" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016556
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0004519 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC007259 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00534837 RefSeq:NP_172596.1 UniGene:At.65900
ProteinModelPortal:Q3E6Q1 SMR:Q3E6Q1 STRING:Q3E6Q1 PaxDb:Q3E6Q1
PRIDE:Q3E6Q1 EnsemblPlants:AT1G11290.1 GeneID:837671
KEGG:ath:AT1G11290 GeneFarm:3466 TAIR:At1g11290 eggNOG:NOG272527
InParanoid:Q3E6Q1 OMA:HVITWNA PhylomeDB:Q3E6Q1
ProtClustDB:CLSN2681952 Genevestigator:Q3E6Q1 Uniprot:Q3E6Q1
Length = 809
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/153 (22%), Positives = 72/153 (47%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T++++L +++ S K++H ++ + + + L+ +Y + + L D +
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V+W S+I QN E++ F +M+ GV P L +C L D G
Sbjct: 298 -LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+H + LG+D ++ N+L++MY + + +D
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 37/157 (23%), Positives = 77/157 (49%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
LL+ S+K + +Q+ +FK F ++L+ ++ + V ++ + + + +
Sbjct: 43 LLERCSSLK---ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 70 PPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH 129
V + ++++ + L ++L FVRM V P F +LK C + R G+ +H
Sbjct: 100 N-VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 130 ACIIRLGVDLDLYTNNALMNMYAQSQNMD--MHIYDR 164
+++ G LDL+ L NMYA+ + ++ ++DR
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
>TAIR|locus:2094812 [details] [associations]
symbol:AT3G29230 "AT3G29230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB026657
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00545218
RefSeq:NP_189568.1 UniGene:At.65178 ProteinModelPortal:Q9LS72
SMR:Q9LS72 PaxDb:Q9LS72 PRIDE:Q9LS72 EnsemblPlants:AT3G29230.1
GeneID:822578 KEGG:ath:AT3G29230 GeneFarm:3696 TAIR:At3g29230
eggNOG:NOG247239 InParanoid:Q9LS72 OMA:NTILDGY PhylomeDB:Q9LS72
ProtClustDB:CLSN2684108 Genevestigator:Q9LS72 Uniprot:Q9LS72
Length = 600
Score = 116 (45.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRC 80
+Q KQLHAQI + + +L+ + + ++ + + ++ P + S+IR
Sbjct: 33 NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC-NSLIRA 91
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
QN ++ F M G++ D+ +P +LK+C+ + +H I +LG+ D
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 141 LYTNNALMNMYAQ 153
+Y NAL++ Y++
Sbjct: 152 IYVPNALIDCYSR 164
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 29 QIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVA-WKSIIRCCTQNGLL 87
++F+ + + S ++ Y+ + + + D + PA V W II + GLL
Sbjct: 237 ELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 88 VESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNAL 147
E+ +M+ SG+ D S+L +CT G +H+ + R + + Y NAL
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 148 MNMYAQSQNM 157
++MYA+ N+
Sbjct: 357 LDMYAKCGNL 366
Score = 47 (21.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 169 GFNGGREAS-VHEVLDKIPERNGNVELSSGLAGCNK 203
G+ RE S E+ +K+PERN V S+ + G +K
Sbjct: 225 GYARCREMSKAFELFEKMPERN-TVSWSTMVMGYSK 259
>TAIR|locus:2018092 [details] [associations]
symbol:MEF9 "AT1G62260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0016554 "cytidine to uridine
editing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC000375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546235 PIR:B96649 RefSeq:NP_176416.1
UniGene:At.66076 ProteinModelPortal:O04590 SMR:O04590 PaxDb:O04590
PRIDE:O04590 EnsemblPlants:AT1G62260.1 GeneID:842523
KEGG:ath:AT1G62260 GeneFarm:3623 TAIR:At1g62260 eggNOG:NOG295783
InParanoid:O04590 OMA:MPTHITF PhylomeDB:O04590
ProtClustDB:CLSN2682086 Genevestigator:O04590 Uniprot:O04590
Length = 656
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 66 KTPAP-PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRF 124
KTP V+W SII +N E++ F+RM G PD + S+L + T LV+ R
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQ-SQNMDMH-IYDRFQ 166
G +H +++ + D+ +NAL+ MY++ + M+ I+D +
Sbjct: 428 GMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMK 470
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
TL +LL + Q+H + KT+ P+ + + L+ +Y+ + +S + D +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEM 469
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSC 116
K + W ++I +G E+L F M +G+YP H F SVL +C
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNAC 520
>TAIR|locus:2086964 [details] [associations]
symbol:MEF25 "mitochondrial RNA editing factor 25"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AP000412 IPI:IPI00521244 RefSeq:NP_189142.1 UniGene:At.53485
ProteinModelPortal:Q9LJR6 SMR:Q9LJR6 PRIDE:Q9LJR6
EnsemblPlants:AT3G25060.1 GeneID:822097 KEGG:ath:AT3G25060
GeneFarm:3870 TAIR:At3g25060 eggNOG:NOG267249 InParanoid:Q9LJR6
OMA:DHATFAS PhylomeDB:Q9LJR6 ProtClustDB:CLSN2915355
Genevestigator:Q9LJR6 Uniprot:Q9LJR6
Length = 601
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 7 LINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLK 66
++ LL+ + + +H +++T P + + + L+ +Y + + + +
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 67 TPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGE 126
V+W S+I QNGL ++ V M G PD VL +C+ + + G
Sbjct: 280 FKTA-VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 127 SVHACIIRLGVDLDLYTNNALMNMYAQ 153
VH I++ V LD T ALM+MY++
Sbjct: 339 LVHCYILKRHV-LDRVTATALMDMYSK 364
>TAIR|locus:2195980 [details] [associations]
symbol:AT1G77170 "AT1G77170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004260 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518933 RefSeq:NP_177842.1
UniGene:At.21362 ProteinModelPortal:Q3ECB8 PaxDb:Q3ECB8
EnsemblPlants:AT1G77170.1 GeneID:844054 KEGG:ath:AT1G77170
GeneFarm:3631 TAIR:At1g77170 eggNOG:NOG311468 InParanoid:Q3ECB8
OMA:LEPWNDG PhylomeDB:Q3ECB8 ProtClustDB:CLSN2682973
Genevestigator:Q3ECB8 Uniprot:Q3ECB8
Length = 467
Score = 121 (47.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 40/162 (24%), Positives = 72/162 (44%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
++K V I + K+LH+ + F S + +Y ++ + D + P
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFD--ENPE 180
Query: 70 PPV-AWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESV 128
+ +W +II G E++ FV M SG+ PD SV SC L D +
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 129 HACIIRLGVD--LDLYTNNALMNMYAQSQNMDM--HIYDRFQ 166
H C+++ + D+ N+L++MY + MD+ HI++ +
Sbjct: 241 HKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR 282
>TAIR|locus:2129361 [details] [associations]
symbol:AT4G14050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:Z97335 PROSITE:PS51375
EMBL:AL161537 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:BX840233 IPI:IPI00528310 PIR:B85153
PIR:F71401 RefSeq:NP_193141.2 UniGene:At.49691
ProteinModelPortal:O23266 SMR:O23266 PRIDE:O23266
EnsemblPlants:AT4G14050.1 GeneID:827041 KEGG:ath:AT4G14050
GeneFarm:3176 TAIR:At4g14050 eggNOG:NOG258429 OMA:YSKCSDI
PhylomeDB:O23266 ProtClustDB:CLSN2690293 Genevestigator:O23266
Uniprot:O23266
Length = 612
Score = 121 (47.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 38/137 (27%), Positives = 63/137 (45%)
Query: 18 KTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSI 77
+T + AK LHA I K L + L+ +Y +L + D + +AW S+
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH-RDHIAWASV 75
Query: 78 IRCCTQNGLLVESLTCFVRM-IGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLG 136
+ Q L ++L+ F + SG+ PD VF +++K+C L G VH I
Sbjct: 76 LTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSE 135
Query: 137 VDLDLYTNNALMNMYAQ 153
D ++L++MYA+
Sbjct: 136 YANDEVVKSSLVDMYAK 152
>TAIR|locus:2032955 [details] [associations]
symbol:AT1G25360 "AT1G25360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC079374 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533539 PIR:E86383 RefSeq:NP_173907.1
UniGene:At.41352 ProteinModelPortal:Q9FRI5 SMR:Q9FRI5
EnsemblPlants:AT1G25360.1 GeneID:839121 KEGG:ath:AT1G25360
GeneFarm:3520 TAIR:At1g25360 eggNOG:NOG253193 InParanoid:Q9FRI5
OMA:EPCDYAF PhylomeDB:Q9FRI5 ProtClustDB:CLSN2682612
Genevestigator:Q9FRI5 Uniprot:Q9FRI5
Length = 790
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 40/151 (26%), Positives = 76/151 (50%)
Query: 15 VSIKTK--SQAKQLHA--QIF-KTLEPNSRFLISRLL-FIYNN-FNLVHDSLCLLDTLKT 67
VS+ +K S LH+ ++F + LE + R + + ++ N F+L + LL+ +
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEE---LLEGMDD 247
Query: 68 PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGES 127
VA+ ++I G E+L RM+ SG+ D +PSV+++C + G+
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 128 VHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
VHA ++R D + +N+L+++Y + D
Sbjct: 308 VHAYVLRRE-DFSFHFDNSLVSLYYKCGKFD 337
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
++W +I +NG E L F M G P F +KSC +L + G+ HA
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
++++G D L NAL+ MYA+
Sbjct: 443 LLKIGFDSSLSAGNALITMYAK 464
>TAIR|locus:2127801 [details] [associations]
symbol:AT4G32430 "AT4G32430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AL161581 EMBL:AL034567 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:BT006447 EMBL:AK227348
IPI:IPI00528564 PIR:T05353 RefSeq:NP_194969.2 UniGene:At.31663
ProteinModelPortal:Q84MA3 SMR:Q84MA3 PRIDE:Q84MA3
EnsemblPlants:AT4G32430.1 GeneID:829378 KEGG:ath:AT4G32430
GeneFarm:4023 TAIR:At4g32430 eggNOG:NOG280004 HOGENOM:HOG000242511
InParanoid:Q84MA3 OMA:ITMYAKF PhylomeDB:Q84MA3
ProtClustDB:CLSN2680228 Genevestigator:Q84MA3 Uniprot:Q84MA3
Length = 763
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 7 LINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLK 66
LIN +K IK + ++H KT + + + + +Y F + D+ + +
Sbjct: 378 LINAVKCNEQIK---EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI- 433
Query: 67 TPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF--RF 124
T ++W ++I QNG E+L F+ + P+ F SVL + D +
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQ 492
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G+ HA +++LG++ ++AL++MYA+ N+D
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Score = 113 (44.8 bits), Expect = 0.00093, P = 0.00093
Identities = 33/132 (25%), Positives = 62/132 (46%)
Query: 25 QLHAQIFKTLEPNSRFL-ISRLLF-IYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCT 82
Q+H F T + F+ +S + +Y ++LC+ + L P V+W +I+
Sbjct: 97 QIHG--FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP-DVVSWNTILSGFD 153
Query: 83 QNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLY 142
N + +L VRM +GV D + + L C F G + + +++ G++ DL
Sbjct: 154 DNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 143 TNNALMNMYAQS 154
N+ + MY++S
Sbjct: 211 VGNSFITMYSRS 222
>TAIR|locus:2055919 [details] [associations]
symbol:AT2G22070 "AT2G22070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR019734 Pfam:PF13176
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC007232 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00546911
PIR:F84608 RefSeq:NP_179798.1 UniGene:At.39486
ProteinModelPortal:Q9SHZ8 SMR:Q9SHZ8 EnsemblPlants:AT2G22070.1
GeneID:816742 KEGG:ath:AT2G22070 GeneFarm:3362 TAIR:At2g22070
eggNOG:NOG294209 InParanoid:Q9SHZ8 OMA:SHYACMV PhylomeDB:Q9SHZ8
ProtClustDB:CLSN2683727 Genevestigator:Q9SHZ8 Uniprot:Q9SHZ8
Length = 786
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
TL +L S+ + S KQ+H K+ E S + + L+ +Y + + D +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCT 117
+ V+W S+I Q+G E+L F M+ G+ PDH + V +CT
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 8 INLLKNPVSIKTKSQAKQLHAQ-IFKTLEPNSRFLISRLLFIYNNFNLVHDSLC-LLDTL 65
+ L+ N +++ +K+ LHA+ +F + + F + +L Y+ + DS C D L
Sbjct: 49 VYLMNNLMNVYSKT-GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM-DSTCEFFDQL 106
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
V+W ++I G +++ M+ G+ P +VL S G
Sbjct: 107 PQ-RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQN--MDMHIYDR 164
+ VH+ I++LG+ ++ +N+L+NMYA+ + M ++DR
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVY-PDHNVFPSVLKSCTLLVDFRFGESVHA 130
V W S+I Q G + +L F +M+ + PD SVL +C L G+ +H+
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 131 CIIRLGVDLDLYTNNALMNMYAQ 153
I+ G D+ NAL++MY++
Sbjct: 304 HIVTTGFDISGIVLNALISMYSR 326
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
VAW ++I Q+G E++ F M+G G P+ ++L + L G+ +H
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 132 IIRLGVDLDLYTNNALMNMYAQSQNM 157
++ G + +NAL+ MYA++ N+
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNI 464
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/78 (19%), Positives = 37/78 (47%)
Query: 9 NLLKNPVSIKT-KSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKT 67
NLL+ V+ + A+ +H ++ K+ S +L++ L+ +Y+ + L D +
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 68 PAPPVAWKSIIRCCTQNG 85
+W +++ ++ G
Sbjct: 78 RTA-FSWNTVLSAYSKRG 94
Score = 42 (19.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
TL ++L +++ KQ+H+ I T S +++ L+ +Y+ V + L++
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
>TAIR|locus:2058812 [details] [associations]
symbol:AT2G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC002521 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:DQ446457 EMBL:DQ652951 EMBL:BX821054
IPI:IPI00516808 PIR:T00853 RefSeq:NP_178378.1 UniGene:At.41460
UniGene:At.66386 ProteinModelPortal:Q1PFA6 SMR:Q1PFA6 PaxDb:Q1PFA6
PRIDE:Q1PFA6 EnsemblPlants:AT2G02750.1 GeneID:814804
KEGG:ath:AT2G02750 GeneFarm:3689 TAIR:At2g02750 eggNOG:NOG237882
HOGENOM:HOG000115618 InParanoid:A0MEI0 OMA:PDSATWN PhylomeDB:Q1PFA6
ProtClustDB:CLSN2683701 Genevestigator:Q1PFA6 Uniprot:Q1PFA6
Length = 613
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 62 LDTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVD 121
LD+ W S+I +Q G ++E+ F RM+ + P S+L +C+ +
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWT 383
Query: 122 FRFGESVHACIIRLGVDLDLYTNNALMNMYAQS--QNMDMHIYDRFQ 166
+ G+ +H +I+ + D++ +L++MY + + I+DRF+
Sbjct: 384 LKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFE 430
Score = 111 (44.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 10 LLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPA 69
LLK+ + Q + LHAQ+ KT F + L+ +Y V D+L +LD + P
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM--PE 94
Query: 70 PPVAW-KSIIRCCTQNGLLVESLTCF--VRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGE 126
+A + + +NG ++ F R+ GSG+ + SVL C D G
Sbjct: 95 RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM--NSVTVASVLGGCG---DIEGGM 149
Query: 127 SVHACIIRLGVDLDLYTNNALMNMYAQ 153
+H ++ G ++++Y +L++MY++
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSR 176
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 173 GREASVHEVLDKIPERNGNVELSSGLAGCNK 203
GR EV+D++ E + +V SS L C +
Sbjct: 521 GRLREAKEVIDQMSEPSSSV-YSSLLGSCRQ 550
>TAIR|locus:2167593 [details] [associations]
symbol:AT5G44230 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005239 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ447037
IPI:IPI00540587 RefSeq:NP_199236.1 UniGene:At.55349
ProteinModelPortal:Q9FFG8 SMR:Q9FFG8 EnsemblPlants:AT5G44230.1
GeneID:834446 KEGG:ath:AT5G44230 GeneFarm:3182 TAIR:At5g44230
eggNOG:NOG302114 InParanoid:Q9FFG8 OMA:VISWTEL PhylomeDB:Q9FFG8
ProtClustDB:CLSN2687233 Genevestigator:Q9FFG8 Uniprot:Q9FFG8
Length = 657
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 33/155 (21%), Positives = 73/155 (47%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC--LLD 63
+LI+ L + +++ +Q KQ+H + + S +++++L+ + D +++
Sbjct: 51 SLISKLDDCINL---NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 64 TLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFR 123
++ P W ++IR G E++ + M + P F ++LK+C + D
Sbjct: 108 PVQF-RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
G HA RL +Y N +++MY + +++D
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESID 201
>TAIR|locus:2084963 [details] [associations]
symbol:AT3G04750 "AT3G04750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00519828
RefSeq:NP_187126.1 UniGene:At.53184 ProteinModelPortal:Q9SR01
SMR:Q9SR01 PaxDb:Q9SR01 PRIDE:Q9SR01 EnsemblPlants:AT3G04750.1
GeneID:819635 KEGG:ath:AT3G04750 GeneFarm:3697 TAIR:At3g04750
eggNOG:NOG261705 InParanoid:Q9SR01 OMA:SRSIWGS PhylomeDB:Q9SR01
ProtClustDB:CLSN2684293 Genevestigator:Q9SR01 Uniprot:Q9SR01
Length = 661
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 54/204 (26%), Positives = 89/204 (43%)
Query: 21 SQAKQLHAQIFKT-LEPNSRFLISRLLFIY---NNFNLVHDSLCLLDTLKTPAPPVA-WK 75
S+ KQ+H I + +L + L+ Y NF + + P P V+ +
Sbjct: 147 SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFA-----RMPHPDVSSFN 201
Query: 76 SIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
+I + G +E+L + +M+ G+ PD S+L C L D R G+ VH I R
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 136 G--VDLDLYTNNALMNMY--AQSQNMDMHIYDRFQ------------GFGFNGGREASVH 179
G +L +NAL++MY + + +D + GF G EA+
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAA-Q 320
Query: 180 EVLDKIPERNGNVELSSGLAGCNK 203
V D++P+R+ V +S L G +K
Sbjct: 321 AVFDQMPKRD-LVSWNSLLFGYSK 343
>TAIR|locus:2083631 [details] [associations]
symbol:AT3G15130 "AT3G15130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AP001299
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524662
RefSeq:NP_188131.1 UniGene:At.65091 ProteinModelPortal:P0C898
SMR:P0C898 EnsemblPlants:AT3G15130.1 GeneID:820744
KEGG:ath:AT3G15130 GeneFarm:3534 TAIR:At3g15130 eggNOG:NOG277199
OMA:KEVHFFY PhylomeDB:P0C898 ProtClustDB:CLSN2685096
Genevestigator:P0C898 Uniprot:P0C898
Length = 689
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W +++ NG L SL+ F M G+YP+ F + LK+C LL G +H
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 132 IIRLGVDLDLYTNNALMNMYAQ 153
+++G ++ + N+L++MY++
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSK 154
>TAIR|locus:2010012 [details] [associations]
symbol:AT1G13410 "AT1G13410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226699 IPI:IPI00548139 RefSeq:NP_172798.2 UniGene:At.51594
ProteinModelPortal:Q0WVP2 SMR:Q0WVP2 STRING:Q0WVP2 PaxDb:Q0WVP2
PRIDE:Q0WVP2 EnsemblPlants:AT1G13410.1 GeneID:837901
KEGG:ath:AT1G13410 TAIR:At1g13410 eggNOG:NOG254840
InParanoid:Q0WVP2 OMA:KVAMRDT PhylomeDB:Q0WVP2
ProtClustDB:CLSN2920227 Genevestigator:Q0WVP2 Uniprot:Q0WVP2
Length = 474
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 73 AWKSIIRCCTQNGLLVESLTCFVRMIGSG-VYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
+W +I+ QNG + E L F RM+ G V P+ VL +C L F FG+ VH
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 132 IIRLGVD-LDLYTNNALMNMYAQSQNMDMHIYDRFQG 167
LG + +D+ NAL++MY + +++ + + F+G
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAM-EVFKG 249
>TAIR|locus:2090990 [details] [associations]
symbol:AT3G14330 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB022220 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00545125 RefSeq:NP_188050.1
UniGene:At.53310 ProteinModelPortal:Q9LUL5 PaxDb:Q9LUL5
PRIDE:Q9LUL5 EnsemblPlants:AT3G14330.1 GeneID:820653
KEGG:ath:AT3G14330 GeneFarm:3442 TAIR:At3g14330 eggNOG:NOG291469
InParanoid:Q9LUL5 OMA:VCGHSER PhylomeDB:Q9LUL5
ProtClustDB:CLSN2684926 Genevestigator:Q9LUL5 Uniprot:Q9LUL5
Length = 710
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 3 STKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLL 62
S TL +L + K++HAQI K+ E L++ L+ +Y V S +
Sbjct: 336 SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 63 DTLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCT 117
D + T +W ++ C NG + E + F MI SGV PD F ++L C+
Sbjct: 396 DVMLTK-DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 42/183 (22%), Positives = 81/183 (44%)
Query: 11 LKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAP 70
LK V +K + +HAQI K E + + + LL +Y L D+ + D + +
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM-SERN 301
Query: 71 PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA 130
V W S+I ++ + E F +M + ++L +C+ + G+ +HA
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 361
Query: 131 CIIRLGVDLDLYTNNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASVHEVLDKIPERNG 190
I++ D+ N+LM+MY + ++ Y R + F ++ + ++ NG
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVE---YSR-RVFDVMLTKDLASWNIMLNCYAING 417
Query: 191 NVE 193
N+E
Sbjct: 418 NIE 420
>TAIR|locus:2025242 [details] [associations]
symbol:AT1G77010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 EMBL:AC002291 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00530062 PIR:B96799
RefSeq:NP_177827.1 UniGene:At.52541 ProteinModelPortal:O49287
SMR:O49287 PaxDb:O49287 PRIDE:O49287 EnsemblPlants:AT1G77010.1
GeneID:844037 KEGG:ath:AT1G77010 GeneFarm:3630 TAIR:At1g77010
eggNOG:NOG274540 HOGENOM:HOG000083580 InParanoid:O49287 OMA:NTMIEGY
PhylomeDB:O49287 ProtClustDB:CLSN2682961 Genevestigator:O49287
Uniprot:O49287
Length = 695
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 28/125 (22%), Positives = 63/125 (50%)
Query: 29 QIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQNGLLV 88
++F +E L++ ++ +Y + + D+ + + ++ + ++W S+ +QNG V
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL-ISWNSMTNGFSQNGCTV 432
Query: 89 ESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTNNALM 148
E+L F +M + D SV+ +C + GE V A +G+D D +++L+
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLI 492
Query: 149 NMYAQ 153
++Y +
Sbjct: 493 DLYCK 497
>TAIR|locus:2038603 [details] [associations]
symbol:AT2G27610 "AT2G27610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006232 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00547006 PIR:G84674
RefSeq:NP_180329.1 UniGene:At.13265 UniGene:At.66363
ProteinModelPortal:Q9ZUW3 SMR:Q9ZUW3 PRIDE:Q9ZUW3
EnsemblPlants:AT2G27610.1 GeneID:817307 KEGG:ath:AT2G27610
GeneFarm:3453 TAIR:At2g27610 eggNOG:NOG320969 InParanoid:Q9ZUW3
OMA:IVAWSAM PhylomeDB:Q9ZUW3 ProtClustDB:CLSN2683516
Genevestigator:Q9ZUW3 Uniprot:Q9ZUW3
Length = 868
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
Q+H + K + + + L+ +Y V + L D + + V W S+I N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV-VTWNSMISGYAAN 273
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDLYTN 144
GL +E+L F M + V + F SV+K C L + RF E +H +++ G D
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 145 NALMNMYAQSQNM 157
ALM Y++ M
Sbjct: 334 TALMVAYSKCTAM 346
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
++HAQ+ KT S + + LL Y V ++ + + VAW +++ Q
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQT 472
Query: 85 GLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLL-VDFRFGESVHACIIRLGVDLDLYT 143
G ++ F + G+ P+ F S+L C G+ H I+ +D L
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 144 NNALMNMYAQSQNMD 158
++AL+ MYA+ N++
Sbjct: 533 SSALLTMYAKKGNIE 547
>TAIR|locus:4010713776 [details] [associations]
symbol:AT3G26782 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB016889 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK228506 IPI:IPI00852362
RefSeq:NP_001078212.1 UniGene:At.71198 ProteinModelPortal:Q9LW32
SMR:Q9LW32 EnsemblPlants:AT3G26782.1 GeneID:5008030
KEGG:ath:AT3G26782 GeneFarm:3356 TAIR:At3g26782 eggNOG:NOG324646
OMA:TSIIDMY PhylomeDB:Q9LW32 ProtClustDB:CLSN2696675
Genevestigator:Q9LW32 Uniprot:Q9LW32
Length = 659
Score = 117 (46.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 73 AWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACI 132
+W S+I ++G E+L F M +YP + FP +K+C+ L D G+ H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 133 IRLGVDLDLYTNNALMNMYA 152
G D++ ++AL+ MY+
Sbjct: 103 FVFGYQSDIFVSSALIVMYS 122
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 173 GREASVHEVLDKIPERN 189
G+ +V D+IP+RN
Sbjct: 125 GKLEDARKVFDEIPKRN 141
>TAIR|locus:2140235 [details] [associations]
symbol:AT4G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161495 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC004044 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00548792 PIR:A85035
RefSeq:NP_192184.1 UniGene:At.50610 ProteinModelPortal:Q9SY02
SMR:Q9SY02 PRIDE:Q9SY02 EnsemblPlants:AT4G02750.1 GeneID:828187
KEGG:ath:AT4G02750 GeneFarm:3233 TAIR:At4g02750 eggNOG:NOG280862
InParanoid:Q9SY02 OMA:MYVLLSN PhylomeDB:Q9SY02
ProtClustDB:CLSN2685776 Genevestigator:Q9SY02 Uniprot:Q9SY02
Length = 781
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 71 PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA 130
PV+W ++I +Q+G E+L FV+M G + + F S L +C +V G+ +H
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 131 CIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+++ G + + NAL+ MY + +++
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIE 461
>TAIR|locus:2161018 [details] [associations]
symbol:AT5G56310 "AT5G56310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AB009049
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK229016 IPI:IPI00527231
RefSeq:NP_200442.1 UniGene:At.70454 ProteinModelPortal:Q9FMA1
SMR:Q9FMA1 PRIDE:Q9FMA1 EnsemblPlants:AT5G56310.1 GeneID:835730
KEGG:ath:AT5G56310 GeneFarm:4045 TAIR:At5g56310 eggNOG:NOG310822
InParanoid:Q9FMA1 OMA:KANAAIW PhylomeDB:Q9FMA1
ProtClustDB:CLSN2687172 Genevestigator:Q9FMA1 Uniprot:Q9FMA1
Length = 530
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W +I ++G E++ F RM+ V PD +VL +C L GE + +
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 132 IIRLGVDLDLYTNNALMNMYAQSQNM 157
+ G++ + NNA+++MYA+S N+
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNI 301
>TAIR|locus:2102514 [details] [associations]
symbol:AT3G56550 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL163972
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:DQ446769 IPI:IPI00541669 PIR:T49056 RefSeq:NP_191214.1
UniGene:At.65282 ProteinModelPortal:Q9LXY5 SMR:Q9LXY5
EnsemblPlants:AT3G56550.1 GeneID:824822 KEGG:ath:AT3G56550
GeneFarm:3526 TAIR:At3g56550 eggNOG:NOG269480 InParanoid:Q9LXY5
OMA:CSHQGLV PhylomeDB:Q9LXY5 ProtClustDB:CLSN2684194
Genevestigator:Q9LXY5 Uniprot:Q9LXY5
Length = 581
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 11 LKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAP 70
LK+ IK+ + ++H + ++ + + + L+ Y+ V + + D +
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPV-RD 172
Query: 71 PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVH- 129
V+W +I C + GL ++L+ + RM GV D ++L SC + G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 130 -ACIIRLGVDLDLYTNNALMNMYAQSQNMDMHIYDRFQGFGFNGGREASV 178
AC IR + ++ +NAL++MYA+ +++ I G FNG R+ V
Sbjct: 233 IACDIRC--ESCVFVSNALIDMYAKCGSLENAI-----GV-FNGMRKRDV 274
>TAIR|locus:2019160 [details] [associations]
symbol:AT1G74630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK220733
EMBL:AK220737 IPI:IPI00540769 PIR:D96775 RefSeq:NP_177601.1
UniGene:At.34855 UniGene:At.70345 ProteinModelPortal:Q9CA54
SMR:Q9CA54 PRIDE:Q9CA54 EnsemblPlants:AT1G74630.1 GeneID:843802
KEGG:ath:AT1G74630 GeneFarm:3465 TAIR:At1g74630 eggNOG:NOG304289
HOGENOM:HOG000237569 InParanoid:Q9CA54 OMA:KVFDEMH PhylomeDB:Q9CA54
ProtClustDB:CLSN2682262 Genevestigator:Q9CA54 Uniprot:Q9CA54
Length = 643
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
V+W ++I NG ES F + +G+ P+ VL +C+ F FG+ +H
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 132 IIRLGVDLDLYTNNALMNMYAQSQNMDM 159
+ + G + NNAL++MY++ N+ M
Sbjct: 295 VEKAGYSWIVSVNNALIDMYSRCGNVPM 322
>TAIR|locus:2131939 [details] [associations]
symbol:MEF29 "AT4G30700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000963
"mitochondrial RNA processing" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161577 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0000963 Pfam:PF13041 HOGENOM:HOG000237570
GO:GO:0080156 EMBL:AL109787 EMBL:BX828159 EMBL:AJ006042
IPI:IPI00535639 PIR:C85359 PIR:T52645 RefSeq:NP_194799.1
UniGene:At.65435 ProteinModelPortal:Q9SUH6 SMR:Q9SUH6 PaxDb:Q9SUH6
PRIDE:Q9SUH6 EnsemblPlants:AT4G30700.1 GeneID:829193
KEGG:ath:AT4G30700 GeneFarm:3164 TAIR:At4g30700 eggNOG:NOG256068
InParanoid:Q9SUH6 OMA:MVKVHSE PhylomeDB:Q9SUH6
ProtClustDB:CLSN2685640 Genevestigator:Q9SUH6 Uniprot:Q9SUH6
Length = 792
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 37/150 (24%), Positives = 68/150 (45%)
Query: 4 TKTLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLD 63
+ TL++L+ PVS +H K+ + + + L +Y+ N + + L D
Sbjct: 322 SSTLVSLV--PVSGHLML-IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 64 TLKTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFR 123
+ P +W ++I TQNGL ++++ F M S P+ +L +C L
Sbjct: 379 ESPEKSLP-SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 124 FGESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G+ VH + + +Y + AL+ MYA+
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAK 467
>TAIR|locus:2121055 [details] [associations]
symbol:AT4G38010 "AT4G38010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 PROSITE:PS51375
EMBL:AL035538 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00533264 PIR:T05628
RefSeq:NP_195514.1 UniGene:At.65469 ProteinModelPortal:Q9SZK1
SMR:Q9SZK1 PRIDE:Q9SZK1 EnsemblPlants:AT4G38010.1 GeneID:829957
KEGG:ath:AT4G38010 GeneFarm:4024 TAIR:At4g38010 eggNOG:NOG236748
InParanoid:Q9SZK1 OMA:DYGRWVH PhylomeDB:Q9SZK1
ProtClustDB:CLSN2685374 Genevestigator:Q9SZK1 Uniprot:Q9SZK1
Length = 559
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
T + +L + + S K +H I K S + L+ +Y + D++ + L
Sbjct: 206 TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRM-IGSGVYPDHNVFPSVLKSCTLLVDFRF 124
+ V+W S+I E++ F M SG+ PD ++ SVL +C L
Sbjct: 266 EKK-DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 125 GESVHACIIRLGVDLDLYTNNALMNMYAQ 153
G VH I+ G+ D + A+++MYA+
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAK 353
>TAIR|locus:2170877 [details] [associations]
symbol:AT5G43790 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 EMBL:AB026651
Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569 EMBL:AY124001
IPI:IPI00535786 RefSeq:NP_199192.1 UniGene:At.9039
ProteinModelPortal:Q9FG85 SMR:Q9FG85 EnsemblPlants:AT5G43790.1
GeneID:834401 KEGG:ath:AT5G43790 GeneFarm:4042 TAIR:At5g43790
eggNOG:NOG254263 InParanoid:Q9FG85 OMA:YPSLFKA PhylomeDB:Q9FG85
ProtClustDB:CLSN2916499 Genevestigator:Q9FG85 Uniprot:Q9FG85
Length = 460
Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
Identities = 32/135 (23%), Positives = 67/135 (49%)
Query: 24 KQLHAQIFKTLEP--NSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCC 81
+ LHA + K LEP + RF+ + L+ Y N + ++ L + ++ P W +++
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREP-DLATWNTLLAAY 191
Query: 82 TQNGLL---VESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVD 138
+ + E L F+RM V P+ +++KSC L +F G H +++ +
Sbjct: 192 ANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 139 LDLYTNNALMNMYAQ 153
L+ + +L+++Y++
Sbjct: 249 LNQFVGTSLIDLYSK 263
>TAIR|locus:2132452 [details] [associations]
symbol:AT4G08210 "AT4G08210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL080252 EMBL:AL161510
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00547188
PIR:T10548 RefSeq:NP_192561.1 UniGene:At.65338
ProteinModelPortal:Q9SUF9 SMR:Q9SUF9 PRIDE:Q9SUF9
EnsemblPlants:AT4G08210.1 GeneID:826371 KEGG:ath:AT4G08210
GeneFarm:4031 TAIR:At4g08210 eggNOG:NOG237305 InParanoid:Q9SUF9
OMA:LGACGTH PhylomeDB:Q9SUF9 ProtClustDB:CLSN2685961
Genevestigator:Q9SUF9 Uniprot:Q9SUF9
Length = 686
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 36/143 (25%), Positives = 68/143 (47%)
Query: 21 SQAKQLHAQIFKTLEPNSRFLISRLLFIYNNF-NLVHDS-LCLLDTLKTPAPPVAWKSII 78
+ KQLH + K+ +S F IS L+ +Y+N +L++ + + + L + W S++
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 79 RCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVD 138
N +L +++ S + D LK C V+ R G VH+ ++ G +
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 139 LDLYTNNALMNMYAQSQNM-DMH 160
LD + L++++A N+ D H
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAH 397
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 35/153 (22%), Positives = 69/153 (45%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTL 65
TL LK ++ Q+H+ + + + S L+ ++ N + D+ L L
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 66 KTPAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFG 125
+A+ +IR C ++G + F +I G+ D + ++LK C+ L +G
Sbjct: 404 PNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 126 ESVHACIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+ +H I+ G + + T AL++MY + +D
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
>TAIR|locus:2124137 [details] [associations]
symbol:DOT4 "DEFECTIVELY ORGANIZED TRIBUTARIES 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010087 "phloem or xylem histogenesis"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010588 "cotyledon vascular tissue pattern
formation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0010087 GO:GO:0048366
GO:GO:0010305 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL035526
GO:GO:0010588 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK221529
IPI:IPI00547122 PIR:T04867 RefSeq:NP_193610.1 UniGene:At.54400
ProteinModelPortal:Q9SN39 SMR:Q9SN39 PaxDb:Q9SN39 PRIDE:Q9SN39
EnsemblPlants:AT4G18750.1 GeneID:827609 KEGG:ath:AT4G18750
GeneFarm:3432 TAIR:At4g18750 eggNOG:NOG288811 InParanoid:Q9SN39
OMA:EGWRFFN PhylomeDB:Q9SN39 ProtClustDB:CLSN2685451
Genevestigator:Q9SN39 Uniprot:Q9SN39
Length = 871
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 16 SIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWK 75
S+++ +QLH I K+ + + L+ Y V + + D + T ++W
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISWN 265
Query: 76 SIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRL 135
SII NGL + L+ FV+M+ SG+ D SV C G +VH+ ++
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 136 GVDLDLYTNNALMNMYAQSQNMD 158
+ N L++MY++ ++D
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLD 348
>TAIR|locus:2079187 [details] [associations]
symbol:AT3G47530 "AT3G47530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL132955
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK221462 IPI:IPI00528158 PIR:T45713 RefSeq:NP_190337.1
UniGene:At.49647 ProteinModelPortal:Q9SN85 SMR:Q9SN85 PaxDb:Q9SN85
PRIDE:Q9SN85 EnsemblPlants:AT3G47530.1 GeneID:823907
KEGG:ath:AT3G47530 GeneFarm:3522 TAIR:At3g47530 eggNOG:NOG247657
InParanoid:Q9SN85 OMA:DSTIWRT PhylomeDB:Q9SN85
ProtClustDB:CLSN2685176 Genevestigator:Q9SN85 Uniprot:Q9SN85
Length = 591
Score = 113 (44.8 bits), Expect = 0.00067, P = 0.00067
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 25 QLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLCLLDTLKTPAPPVAWKSIIRCCTQN 84
Q+H +IF + L++ L+ +Y+ D+ + D + V+W + C +N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK-RDTVSWNVLFSCYLRN 192
Query: 85 GLLVESLTCFVRM---IGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLDL 141
+ L F +M + V PD L++C L FG+ VH I G+ L
Sbjct: 193 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL 252
Query: 142 YTNNALMNMYAQSQNMDMHIYDRFQG 167
+N L++MY++ +MD Y F G
Sbjct: 253 NLSNTLVSMYSRCGSMDK-AYQVFYG 277
>TAIR|locus:2825364 [details] [associations]
symbol:AT1G71420 "AT1G71420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC016163 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK230400 IPI:IPI00539447
RefSeq:NP_177298.1 UniGene:At.51303 ProteinModelPortal:Q9C9H9
SMR:Q9C9H9 EnsemblPlants:AT1G71420.1 GeneID:843483
KEGG:ath:AT1G71420 GeneFarm:3464 TAIR:At1g71420 eggNOG:NOG242517
InParanoid:Q9C9H9 OMA:GSCRKHG PhylomeDB:Q9C9H9
ProtClustDB:CLSN2679244 Genevestigator:Q9C9H9 Uniprot:Q9C9H9
Length = 745
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 72 VAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHAC 131
VAW II ++ F ++ + PD F SVLK+C LV R S+HA
Sbjct: 336 VAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQ 394
Query: 132 IIRLGVDLDLYTNNALMNMYAQSQNMD--MHIYDRFQG---FGFNGGREA-SVHEVLDKI 185
+I+ G D NN+L++ YA+ ++D M ++D +N +A S+H +D I
Sbjct: 395 VIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSI 454
>TAIR|locus:2082886 [details] [associations]
symbol:EMB2261 "embryo defective 2261" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132956
GO:GO:0009793 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AY864347
EMBL:AY864348 IPI:IPI00540837 PIR:T45822 RefSeq:NP_190486.2
UniGene:At.35640 ProteinModelPortal:Q5G1T1 SMR:Q5G1T1 PRIDE:Q5G1T1
EnsemblPlants:AT3G49170.1 GeneID:824078 KEGG:ath:AT3G49170
GeneFarm:3524 TAIR:At3g49170 eggNOG:NOG255947 InParanoid:Q5G1T1
OMA:CALIDMF PhylomeDB:Q5G1T1 ProtClustDB:CLSN2918315
Genevestigator:Q5G1T1 Uniprot:Q5G1T1
Length = 850
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 35/165 (21%), Positives = 83/165 (50%)
Query: 6 TLINLLKNPVSIKTKSQAKQLHAQIFK-TLEPNSRFLISRLLFIYNNFNLVHDSLCLLDT 64
T +LLK+ + + K +HA++ + +EP+S L + L+ +Y+ + + +T
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS-VLYNSLISLYSKSGDSAKAEDVFET 122
Query: 65 LKT--PAPPVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDF 122
++ V+W +++ C NG ++++ FV + G+ P+ + +V+++C+ DF
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS-DF 181
Query: 123 -RFGESVHACIIRLG-VDLDLYTNNALMNMYAQSQNMDMHIYDRF 165
G +++ G + D+ +L++M+ + +N + Y F
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
>TAIR|locus:2047017 [details] [associations]
symbol:AT2G21090 "AT2G21090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006264
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX820424
IPI:IPI00532746 PIR:A84597 RefSeq:NP_179705.1 UniGene:At.49547
ProteinModelPortal:Q9SKQ4 SMR:Q9SKQ4 STRING:Q9SKQ4
EnsemblPlants:AT2G21090.1 GeneID:816644 KEGG:ath:AT2G21090
GeneFarm:3691 TAIR:At2g21090 eggNOG:NOG309199 InParanoid:Q9SKQ4
OMA:FSSCLCA PhylomeDB:Q9SKQ4 ProtClustDB:CLSN2683569
Genevestigator:Q9SKQ4 Uniprot:Q9SKQ4
Length = 597
Score = 112 (44.5 bits), Expect = 0.00089, P = 0.00089
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 71 PVAWKSIIRCCTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHA 130
PV+W ++I + G +L F +MI GV P+ F S L + + R G+ +H
Sbjct: 276 PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHG 335
Query: 131 CIIRLGVDLDLYTNNALMNMYAQSQNMD 158
+IR V + ++L++MY++S +++
Sbjct: 336 YMIRTNVRPNAIVISSLIDMYSKSGSLE 363
>TAIR|locus:2150936 [details] [associations]
symbol:AT5G15340 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00531606 PIR:T49969 RefSeq:NP_197038.1
UniGene:At.66725 ProteinModelPortal:Q9LXE8 SMR:Q9LXE8 PRIDE:Q9LXE8
EnsemblPlants:AT5G15340.1 GeneID:831386 KEGG:ath:AT5G15340
GeneFarm:3539 TAIR:At5g15340 eggNOG:NOG317118 InParanoid:Q9LXE8
OMA:SEKLAVC PhylomeDB:Q9LXE8 ProtClustDB:CLSN2687457
Genevestigator:Q9LXE8 Uniprot:Q9LXE8
Length = 623
Score = 112 (44.5 bits), Expect = 0.00095, P = 0.00094
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 24 KQLHAQIFKT-LEPNSRFLISRLLF-IYNNFNLVHDSLCLLDTLK-TPAPPVAWKSIIRC 80
K+LHA + + L+ R +S LF Y + + + L D + + V W +++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 81 CTQNGLLVESLTCFVRMIGSGVYPDHNVFPSVLKSCTLLVDFRFGESVHACIIRLGVDLD 140
++ GLLV S+ FV M V D + C L D F + H +++GV
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS 145
Query: 141 LYTNNALMNMYAQ 153
+ NALM+MY +
Sbjct: 146 VKVCNALMDMYGK 158
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 219 219 0.00092 112 3 11 22 0.48 32
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 132
No. of states in DFA: 593 (63 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.79u 0.14s 19.93t Elapsed: 00:00:01
Total cpu time: 19.81u 0.14s 19.95t Elapsed: 00:00:01
Start: Sat May 11 10:05:14 2013 End: Sat May 11 10:05:15 2013
WARNINGS ISSUED: 1