Your job contains 1 sequence.
>041899
MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCT
QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL
ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR
VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER
IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD
SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT
VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV
GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF
YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT
SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL
VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVAGRPWLKT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041899
(650 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 2405 1.0e-249 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 2364 2.3e-245 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 2093 1.2e-216 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 2089 3.2e-216 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 2089 3.2e-216 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 2060 3.7e-213 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 2048 7.0e-212 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 2048 7.0e-212 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 2044 1.9e-211 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 2044 1.9e-211 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 2040 4.9e-211 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1978 1.8e-204 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1978 1.8e-204 1
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1961 1.2e-202 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1957 3.1e-202 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1923 1.2e-198 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1808 1.9e-186 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1808 1.9e-186 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1808 1.9e-186 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1808 1.9e-186 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1808 1.9e-186 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1808 1.9e-186 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1808 1.9e-186 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1803 6.4e-186 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1802 8.2e-186 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1796 3.5e-185 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1780 1.8e-183 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1774 7.6e-183 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1727 7.3e-178 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1723 1.9e-177 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1723 1.9e-177 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1712 2.8e-176 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1669 1.0e-171 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1668 1.3e-171 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1663 4.4e-171 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1658 1.5e-170 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1658 1.5e-170 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1640 1.2e-168 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1639 1.5e-168 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1639 1.5e-168 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1637 2.5e-168 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1625 4.7e-167 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1546 9.1e-167 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1616 4.2e-166 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1614 6.8e-166 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1614 6.8e-166 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1614 6.8e-166 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1614 6.8e-166 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1614 6.8e-166 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1614 6.8e-166 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1614 6.8e-166 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1612 1.1e-165 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1610 1.8e-165 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1607 3.8e-165 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1606 4.8e-165 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1605 6.2e-165 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1605 6.2e-165 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1604 7.9e-165 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1601 1.6e-164 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1569 4.0e-161 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1565 1.1e-160 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1563 1.7e-160 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1563 1.7e-160 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1557 7.5e-160 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1556 9.6e-160 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1556 9.6e-160 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1553 2.0e-159 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1540 4.8e-158 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1533 2.6e-157 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1533 2.6e-157 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1513 3.5e-155 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1502 5.1e-154 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1500 8.2e-154 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1463 6.9e-150 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1444 7.1e-148 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1442 1.2e-147 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 1345 2.0e-147 2
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1437 3.9e-147 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1412 1.7e-144 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1408 4.6e-144 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 837 1.6e-143 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 837 1.6e-143 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1397 6.8e-143 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1396 8.6e-143 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1389 4.8e-142 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 713 1.2e-141 2
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 713 1.2e-141 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 988 2.1e-139 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1344 2.8e-137 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 1341 5.8e-137 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1244 2.5e-136 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1332 5.2e-136 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1330 8.5e-136 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1221 6.7e-134 2
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 937 4.7e-133 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 1301 1.0e-132 1
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 863 1.1e-131 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1290 1.5e-131 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 1288 2.4e-131 1
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 863 6.1e-131 2
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 2405 (851.7 bits), Expect = 1.0e-249, P = 1.0e-249
Identities = 455/645 (70%), Positives = 537/645 (83%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ R++LPIY YR+Q+L+AV+E+QV+VIVG+TGSGKTTQIPQYLHEAGYTK GKVGCTQ
Sbjct: 397 LQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQ 456
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EMGVKLGHEVGYSIRFEDCTS+KTVLKYMTDGM+LRE+L +P L
Sbjct: 457 PRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLA 516
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
SYSV++VDEAHERTLSTDIL G+ KD+ R R DLKLLISSAT+DAEKFS YF+ API
Sbjct: 517 SYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSF 576
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGRRYPVEI+YT APE++Y+DAAIVT L IH + GDILVF TGQ RI
Sbjct: 577 PGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRI 636
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
R LGTKI ELI+CP+YANLP+ELQAKIF PTP+GARKVVLATNIAETSLTIDGIKYVVD
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+SKMK YNP+TGMESLL+ PISKASA QRAGR+GRT PGKC+RLYT +Y D+E+NTV
Sbjct: 697 GFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTV 756
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PE+QRTNLA+V+L LK+LGI DL+NFDF+D PP GALN++GELTK G
Sbjct: 757 PEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAG 816
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFPLDPMLSKMIV SDK+KCS+EII+IAA+LS+G S+FYRPK+K+ ADNARMNF+
Sbjct: 817 RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFH 876
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
G+ GDHIALL VY+SWKE ++S QWCY+N+IQ RSMK ARDIRDQL L+ERV I+++S
Sbjct: 877 TGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISS 936
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+L L++++K+I++GF HTA+LQKNGSY TVKHPQ VH+HP+SGL+QV RWV+YHELV
Sbjct: 937 NLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELV 996
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
LT+KEYMRQVTELKPEWL E+APHYY LKDVED KKMP+ AG+
Sbjct: 997 LTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKMPKGAGK 1041
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 2364 (837.2 bits), Expect = 2.3e-245, P = 2.3e-245
Identities = 449/646 (69%), Positives = 529/646 (81%)
Query: 1 MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCT 60
MLQ++RK LPIY YR+Q+L AV+++QV++IVGETGSGKTTQIPQYLHEAGYTK GKVGCT
Sbjct: 396 MLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCT 455
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMG KLGHEVGYSIRFEDCTSEKT+LKYMTDGM+LRE+L +P L
Sbjct: 456 QPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDL 515
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV++VDEAHERTL TDIL G+ KD+ R R DLKLLISSAT+DAEKFS +F+ API R
Sbjct: 516 GSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFR 575
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
PGRRYPV+I +T APE++Y+DAAI T L IH + GD+LVFL GQ +
Sbjct: 576 FPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHK 635
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
IR LGTKI ELI+CP+YANLP+ELQAKIF PTP+GARKVVLATNIAETSLTIDGIKYVVD
Sbjct: 636 IRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVD 695
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+SKMK YNP+TGMESLLV PISKASA QR GR+GRT PGKC+RLYT +Y D+EDNT
Sbjct: 696 PGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNT 755
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRTNLA+V+L LK+LGI +LLNFDF+D PP GALNQ+GELTK
Sbjct: 756 VPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKA 815
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAEFPLDPMLSKMIV SDK+KCS+EII+IAA+LS+G S+FYRPK+K+ ADNA NF
Sbjct: 816 GRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNF 875
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ G+ GDHIA L +YNSWKE +YS QWCY+N+IQ RSMK ARDIRDQL L+ERV I+++
Sbjct: 876 HVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVS 935
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S+ L++++K+I++GF HTA+LQKNGSY TVKHPQ VH+HP+SGL+QV RWV+YH+L
Sbjct: 936 SNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQL 995
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLT+KEYMRQVTELKPEWL EIAPHYY LKDVED KKMP+ +GR
Sbjct: 996 VLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKKMPKTSGR 1041
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 2093 (741.8 bits), Expect = 1.2e-216, P = 1.2e-216
Identities = 394/646 (60%), Positives = 502/646 (77%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q+ R++LPI+ YRE +L A+ ++Q++VI GETGSGKTTQIPQYL E GYTK G K+GCT
Sbjct: 405 IQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCT 464
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EM VKLG+EVGYSIRFEDCTSE+T+LKYMTDGM+LRE L++P L
Sbjct: 465 QPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDL 524
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+++DEAHERTL TDIL G+ KD+ R R DLK+L++SATLD E+FS++F+ AP+ R
Sbjct: 525 ASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFR 584
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I+YTKAPE++Y++A +V+ L+IH TQ+ GD+LVFLTGQ R
Sbjct: 585 IPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCELLQER 644
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QAKIF PTP GARKVV+ATNIAETSLTIDGI YV+D
Sbjct: 645 CRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVID 704
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YN KTGMESL+V P S+ASA QRAGR+GR GKCFRLYT +++ +ME+ T
Sbjct: 705 PGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETT 764
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRTNL NV+L+LK+LGI+DL++FDF+D PP GALN +GELTK+
Sbjct: 765 VPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKL 824
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+++KCS E++TIAA+LSV NS+FYRPK+K ADNARMNF
Sbjct: 825 GRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNF 884
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
GDH+ LLNVY W E+ YS QWC++NFIQFRSMK ARD+RDQL L++R+ +EL
Sbjct: 885 VV-PGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELC 943
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
SS + ++KA+ +G+ HTARL K G Y TVKH Q V+VHP+S L + RW+IYHEL
Sbjct: 944 SSNGDSMPIRKAVTAGYFYHTARLSKGG-YKTVKHQQTVYVHPNSSLFEEQPRWMIYHEL 1002
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
V TTKE+MRQV E++ WL E+APHYY K++ED KKMPR G+
Sbjct: 1003 VFTTKEFMRQVIEIESGWLLEVAPHYYKNKELEDSSSKKMPRKQGK 1048
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 2089 (740.4 bits), Expect = 3.2e-216, P = 3.2e-216
Identities = 388/644 (60%), Positives = 498/644 (77%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+Q+ RK+LP+Y YREQ++ AV+E QV++IVGETGSGKTTQIPQYLHEAG++K GK+GCTQ
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQ 519
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+G KLG+EVGYSIRFEDCTS+KTVL+YMTDGM++RE L+ P L
Sbjct: 520 PRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLA 579
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
SYSVL++DEAHERTL TDIL G+ KD+ R R DLKLLISSAT+DAE+FS YF+ AP +
Sbjct: 580 SYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNI 639
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR+Y V HYT+APE++Y+DAA+VT L+IH T+ GDILVFLTGQ R
Sbjct: 640 PGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRT 699
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
R LGTKI ELI+ +Y+ LPT+LQAKIF PTP ARKVVLATNIAETSLTIDGI YV+D
Sbjct: 700 RGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDP 759
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+ K K +NP+TGMESL++ P+S+ASA QR GR+GR PGKCFRL+T ++ ++E+NT+
Sbjct: 760 GFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTI 819
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNL NV+L+LK++GI+DL+NFDF+D PP GALN G+LTK+G
Sbjct: 820 PEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLG 879
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFP+DP LSKMI+AS+K+KCS EI+TI A+LSVGN++FYRPK+K F AD AR F+
Sbjct: 880 RKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFF 939
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
GDH+ L+NV+N W+E+ Y+ QWC++NFIQ RSMK A+D+RDQL L+ERV I L S
Sbjct: 940 HPQ-GDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVS 998
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
++ + ++++K I SGF ++A+L+K+G + T KH Q V +HPSS L Q P +WV+YHELV
Sbjct: 999 NVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELV 1058
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVAGR 645
LTTKE+MRQ+ E++ WL EIAPH Y KDV D +K+P+ G+
Sbjct: 1059 LTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND-NQKLPKNIGK 1101
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 2089 (740.4 bits), Expect = 3.2e-216, P = 3.2e-216
Identities = 396/646 (61%), Positives = 497/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
L + R++LP+Y ++E ++ AV+E+QV++I GETGSGKTTQ+PQYL EAG+TK K +GCT
Sbjct: 245 LDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCT 304
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTS++T+LKYMTDG + RE LS+P L
Sbjct: 305 QPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDL 364
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+++DEAHERTL TDIL G+ KD+ R R +LKLLISSATLDAEKFSA+F+ API R
Sbjct: 365 ASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFR 424
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRRYPV+I YTKAPE++YIDA V+ L+IHATQ GDILVFLTGQ R
Sbjct: 425 IPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDR 484
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+++LG+KI ELIV PVYANLP+++QAKIF PTP ARKV+LATNIAETSLTID I YV+D
Sbjct: 485 VKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVID 544
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G++K +N +TGMESL+V PISKASA QRAGR+GRT PGKCFRLYT +Y+ ++EDNT
Sbjct: 545 PGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNT 604
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQR NL N +L+LK LGI+DL++FDFLD PP GALN GELTK+
Sbjct: 605 VPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKL 664
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAEFP+DPM+ KM++AS+K+KCS E++TIAA+LSV +++FYRPK+K AD AR NF
Sbjct: 665 GRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNF 724
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
GDH++LL VYN W E DYS QWCY+NFIQ+RSMK ARD+R+QL L++RV I++
Sbjct: 725 NHMH-GDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMV 783
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S L ++KA +G+ H ARL K G Y T+KH Q V +HP+S L + RWV+YHEL
Sbjct: 784 SCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHEL 843
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED-LRKKMPRVAGR 645
V T+KEYMRQV E++ +WL E+APHYY K++ED KKMP+VAGR
Sbjct: 844 VFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAGR 889
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 2060 (730.2 bits), Expect = 3.7e-213, P = 3.7e-213
Identities = 390/646 (60%), Positives = 494/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ +QV++I GETGSGKTTQIPQYL E GYTK G K+ CT
Sbjct: 395 IQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 454
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 455 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 514
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SATLD +FSA+F+ AP+ R
Sbjct: 515 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFR 574
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 575 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 634
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 635 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 694
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 695 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 754
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT
Sbjct: 755 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 814
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 815 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 874
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + LT
Sbjct: 875 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLT 933
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI SG+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 934 SCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHEL 992
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 993 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKVGK 1038
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 2048 (726.0 bits), Expect = 7.0e-212, P = 7.0e-212
Identities = 388/646 (60%), Positives = 493/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ +QV++I GETGSGKTTQIPQYL E GYTK G K+ CT
Sbjct: 396 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 455
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 515
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SATLD +FS +F+ API R
Sbjct: 516 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFR 575
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 576 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 755
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT
Sbjct: 756 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 815
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 816 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 875
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 876 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 935 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHEL 993
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 994 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGK 1039
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 2048 (726.0 bits), Expect = 7.0e-212, P = 7.0e-212
Identities = 387/646 (59%), Positives = 494/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ ++QV++I GETGSGKTTQIPQYL E GYTK G K+ CT
Sbjct: 393 VQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 452
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 453 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 512
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SATLD +FS +F+ AP+ R
Sbjct: 513 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFR 572
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 573 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 632
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 633 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 692
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 693 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 752
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT
Sbjct: 753 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 812
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 813 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 872
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 873 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 931
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 932 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHEL 990
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 991 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPKKIGK 1036
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 2044 (724.6 bits), Expect = 1.9e-211, P = 1.9e-211
Identities = 386/646 (59%), Positives = 493/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L AV +Q+++I GETGSGKTTQIPQYL E GYT+ G K+ CT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 515
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SATLD +FS +F+ AP+ R
Sbjct: 516 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFR 575
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 576 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 755
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT
Sbjct: 756 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 815
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 816 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 875
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 876 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 935 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHEL 993
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 994 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGK 1039
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 2044 (724.6 bits), Expect = 1.9e-211, P = 1.9e-211
Identities = 386/646 (59%), Positives = 493/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L AV +Q+++I GETGSGKTTQIPQYL E GYT+ G K+ CT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 515
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SATLD +FS +F+ AP+ R
Sbjct: 516 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFR 575
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 576 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 755
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT
Sbjct: 756 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 815
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 816 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 875
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 876 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 935 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHEL 993
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 994 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGK 1039
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 2040 (723.2 bits), Expect = 4.9e-211, P = 4.9e-211
Identities = 385/646 (59%), Positives = 492/646 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ +QV++I GETGSGKTTQIPQYL E GYT G K+ CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 511
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SAT+D +FS +F+ AP+ R
Sbjct: 512 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 571
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 572 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 691
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 692 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 751
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT
Sbjct: 752 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 811
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 812 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 871
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 872 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 930
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 931 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHEL 989
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 990 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGK 1035
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1978 (701.3 bits), Expect = 1.8e-204, P = 1.8e-204
Identities = 377/647 (58%), Positives = 491/647 (75%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+++ RK+LP+Y +R+ + AV+E+QV++I GETGSGKTTQ+PQYL+EAG+ + GK +GCT
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCT 416
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E+G KLG +VGYSIRFEDCTSEKTVLKYMTDGM+LRE L++P L
Sbjct: 417 QPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+M+DEAHERTL TDIL G+ KD+ R R DLKLLISSATLDAEKFS++F+ API R
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFR 536
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQXXXXXXXXXXXX 239
+PGRR+PV+I+YT+APE++Y+DAAIVT ++IH TQ GDILVFLTGQ
Sbjct: 537 IPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALME 596
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVV 299
R + LG+KI ELI PVYANLP++LQAKIF PTP ARKVVLATNIAETS+TIDGI YV+
Sbjct: 597 RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVI 656
Query: 300 DSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDN 359
D G+SK ++ ++G+E L V ISKA+A QRAGR+GRTGPGKCFRLYT +Y+ ++E+
Sbjct: 657 DPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQ 716
Query: 360 TVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTK 419
+PEIQRTNL NV+L+LK+LGI DL++FDFLD PPQ GALN GELTK
Sbjct: 717 PIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTK 776
Query: 420 VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
+GR+MAEFP DP +SKMI+AS+K++CS EI+TIAA+LS +VFYRPK + AD+AR
Sbjct: 777 LGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKG 836
Query: 480 FYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL 539
F+ AGDHI L+NVYN W+E+ +S++WC +N++Q R+MK ARD+RDQL L+ERV IE
Sbjct: 837 FWS-PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIET 895
Query: 540 TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHE 599
SS ++ ++KAI +G+ + ++L G Y TVKH H HP+S L + RWV+Y E
Sbjct: 896 KSSTDTIK-IRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFE 954
Query: 600 LVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL-RKKMPRVAGR 645
LV T+KE+MR+++E++ WL E+APHYY +++ED KKMP+ G+
Sbjct: 955 LVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGK 1001
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1978 (701.3 bits), Expect = 1.8e-204, P = 1.8e-204
Identities = 377/647 (58%), Positives = 491/647 (75%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+++ RK+LP+Y +R+ + AV+E+QV++I GETGSGKTTQ+PQYL+EAG+ + GK +GCT
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCT 416
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E+G KLG +VGYSIRFEDCTSEKTVLKYMTDGM+LRE L++P L
Sbjct: 417 QPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+M+DEAHERTL TDIL G+ KD+ R R DLKLLISSATLDAEKFS++F+ API R
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFR 536
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQXXXXXXXXXXXX 239
+PGRR+PV+I+YT+APE++Y+DAAIVT ++IH TQ GDILVFLTGQ
Sbjct: 537 IPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALME 596
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVV 299
R + LG+KI ELI PVYANLP++LQAKIF PTP ARKVVLATNIAETS+TIDGI YV+
Sbjct: 597 RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVI 656
Query: 300 DSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDN 359
D G+SK ++ ++G+E L V ISKA+A QRAGR+GRTGPGKCFRLYT +Y+ ++E+
Sbjct: 657 DPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQ 716
Query: 360 TVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTK 419
+PEIQRTNL NV+L+LK+LGI DL++FDFLD PPQ GALN GELTK
Sbjct: 717 PIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTK 776
Query: 420 VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
+GR+MAEFP DP +SKMI+AS+K++CS EI+TIAA+LS +VFYRPK + AD+AR
Sbjct: 777 LGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKG 836
Query: 480 FYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL 539
F+ AGDHI L+NVYN W+E+ +S++WC +N++Q R+MK ARD+RDQL L+ERV IE
Sbjct: 837 FWS-PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIET 895
Query: 540 TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHE 599
SS ++ ++KAI +G+ + ++L G Y TVKH H HP+S L + RWV+Y E
Sbjct: 896 KSSTDTIK-IRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFE 954
Query: 600 LVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL-RKKMPRVAGR 645
LV T+KE+MR+++E++ WL E+APHYY +++ED KKMP+ G+
Sbjct: 955 LVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGK 1001
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1961 (695.4 bits), Expect = 1.2e-202, P = 1.2e-202
Identities = 381/649 (58%), Positives = 481/649 (74%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
++ RK LPIY +R+Q+++AV ++QV++IVGETGSGKTTQ+PQYLHEAGYTK+G KVGCT
Sbjct: 474 IEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCT 533
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFED TS+KTVLKYMTDGM+LRE+L++P L
Sbjct: 534 QPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDL 593
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
YS LM+DEAHERT+ TDI G+ KD+ + R DLKLLISSAT+DA+KF +YF+ API
Sbjct: 594 GQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFN 653
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGR Y V+IHYT+ PE+NY+ AAI T +IH +Q GDILVFLTGQ
Sbjct: 654 IPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQET 713
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
RKLG KI E+I+CP+YANLP++LQAKIF PTP ARKVVLATNIAETSLTIDGI YV+D
Sbjct: 714 ARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVID 773
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K +NP+TGMESL+V P S+ASA QRAGR+GR GPGKCFRLYT +Y ++E++T
Sbjct: 774 PGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEEST 833
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
PEIQRTNL++VIL+LK+LGID LL FDF+D PP GALN GELTK+
Sbjct: 834 TPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELTKI 893
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GRQMAEFP DPML+K I+A+DK C E+++I ++L +++F+RPK+KK AD+AR F
Sbjct: 894 GRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRF 953
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
D GDH+ LLN++N W ++D+S W +NF+Q RS+ ARD+RDQL L +RV E+T
Sbjct: 954 TVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRV--EVT 1011
Query: 541 SSLC---NLEAMKKAIISGFLLHTARLQKNG-SYWTVKHPQKVHVHPSSGLAQVPKRWVI 596
S C N+ ++KAI +GF + ARLQ+ G SY T+K Q V++HPSS L +V RWVI
Sbjct: 1012 VSSCGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVNPRWVI 1071
Query: 597 YHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL-RKKMPRVAG 644
Y ELVLT+KEYMR L+ EWL E+APHYY KD+E L +K P+ G
Sbjct: 1072 YFELVLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETLGTEKKPKGQG 1120
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1957 (694.0 bits), Expect = 3.1e-202, P = 3.1e-202
Identities = 373/643 (58%), Positives = 484/643 (75%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-HGKVGCT 60
L+ RK+LP+Y Y++ +L+A+ E QV++IV ETGSGKTTQ+PQ+LHEAGYTK + K+ CT
Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCT 470
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EM V+LG EVGYSIRFE+ TSEKTV+KY+TDGM+LRE L++P L
Sbjct: 471 QPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDL 530
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+++DEAHERTL TDIL G+ KD+ R R DLK+LISSAT+DAEKFSAYF+ AP+
Sbjct: 531 ASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFY 590
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
VPGRRYPV+I+YT PE+NYI AAI T L+IH TQ +GDILVFLTGQ
Sbjct: 591 VPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQEL 650
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R LG +I E+I+CP+YANLP+ELQAKIF PTP GARKVVLATNIAETS+TIDG+ +V+D
Sbjct: 651 CRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVID 710
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
SG+ K YNP+TGMESL+ P S+ASA QRAGR+GR GPGKCFRLYT +Y +++ T
Sbjct: 711 SGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVT 770
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
PEIQRTNL N++L+LK+LGI++LL+FDF+D+PP GALN GELTK+
Sbjct: 771 SPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKL 830
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GRQMAEFP DPMLSK ++AS K+ C E+++I ++L +S+FYRPK+K AD AR NF
Sbjct: 831 GRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANF 890
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL- 539
Q GDH+ LL+++N W + D+S W +NF+Q++S+ ARD+RDQL L ERV IEL
Sbjct: 891 TQ-PGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELV 949
Query: 540 TSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKHPQKVHVHPSSGLAQVPKRWVIYH 598
T+S +L+ +KKAI +G+ + ARL ++G SY TVK Q V++HPSS +A+ + +IY
Sbjct: 950 TNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYF 1009
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPR 641
ELVLTTKEY RQ+TE++PEWL EI+PHY+ +++E+L+K R
Sbjct: 1010 ELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKR 1052
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1923 (682.0 bits), Expect = 1.2e-198, P = 1.2e-198
Identities = 368/647 (56%), Positives = 482/647 (74%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q+ RK+LPIY YR++ L A+++ Q++VIVGETGSGKTTQ+PQYLHEAGYTK G +VGCT
Sbjct: 366 MQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCT 425
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVK+G+EVGYSIRFED TS+KT+LKYMTDGM+LRE +++P L
Sbjct: 426 QPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMTEPDL 485
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYS LM+DEAHERT+ TDILL + KDL R R DLKLLISSAT++AEKF++YF+ API
Sbjct: 486 SSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAPIFN 545
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRRYPV+I+YT APE+NY+ AAI T +IH TQ GDIL+FLTGQ
Sbjct: 546 IPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITET 605
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
RKLG+++ EL++CP+YANLP+ELQ+KIF PTP+ ARKVVLATNIAETSLTIDGI YV+D
Sbjct: 606 ARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVID 665
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
GY K YNP TGM +L+V P S+ASA QR+GR+GR GPGKCFRLYT +Y +ME++T
Sbjct: 666 PGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEEST 725
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
PEIQRTNL V+L LK+LGI++LL+F+F+D PP LN GELTK+
Sbjct: 726 TPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHKGELTKL 785
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GRQMAEFP DPML+K ++A+DK C E+++I A+LS +++F+RPK+K+ AD AR F
Sbjct: 786 GRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRF 845
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLN++N W ++DYS W +NF+Q RS+ ARD+R+QL+ L ERV + L+
Sbjct: 846 TVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCERVEVTLS 905
Query: 541 S--SLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKHPQKVHVHPSSGLAQV--PKRWV 595
+ + N+ +K+AI +GF + AR+Q++G SY TVK+ V++HPSS + Q P R V
Sbjct: 906 TCGGISNMPPIKRAITAGFFPNAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDPPPRMV 965
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPR 641
IY+ELV TTKEYMR ++P+WL E+APH++ KD+ L KK+P+
Sbjct: 966 IYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDIAALEEKKLPK 1012
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 570 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 629
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 630 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 689
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 690 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 749
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 750 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 809
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 810 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 869
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 870 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 929
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 930 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 989
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 990 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1048
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1049 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1107
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1108 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1167
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1168 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1202
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 556 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 615
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 616 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 675
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 676 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 735
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 736 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 795
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 796 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 855
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 856 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 915
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 916 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 975
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 976 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1034
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1035 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1093
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1094 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1153
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1154 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1188
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 560 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 619
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 620 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 679
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 680 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 739
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 740 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 799
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 800 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 859
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 860 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 919
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 920 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1038
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1039 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1097
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1098 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1157
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1158 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1192
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 552 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 611
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 612 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 671
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 672 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 731
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 732 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 791
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 792 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 851
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 852 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 911
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 912 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 971
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 972 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1030
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1031 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1089
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1090 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1149
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1150 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1184
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 584 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 643
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 644 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 703
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 704 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 763
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 764 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 823
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 824 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 883
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 884 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 943
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 944 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 1004 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1062
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1063 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1121
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1122 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1181
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1182 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1216
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 529 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 588
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 589 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 648
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 649 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 708
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 709 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 768
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 769 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 828
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 829 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 888
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 889 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 948
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 949 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1007
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1008 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1066
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1067 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1126
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1127 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1161
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 342/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 582 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 641
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 642 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 701
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 702 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 761
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 762 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 821
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 822 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 881
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 882 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 941
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 942 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1001
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 1002 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1060
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1061 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1119
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1120 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1179
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1180 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1214
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1803 (639.7 bits), Expect = 6.4e-186, P = 6.4e-186
Identities = 341/635 (53%), Positives = 454/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPI+ +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 508 EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 567
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 568 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 627
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 628 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 687
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 688 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 747
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 748 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 807
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 808 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 867
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 868 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 927
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 928 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 986
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 987 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1045
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1046 KATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1105
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1106 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1140
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1802 (639.4 bits), Expect = 8.2e-186, P = 8.2e-186
Identities = 341/635 (53%), Positives = 455/635 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 550 EQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPR 609
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 610 RVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQY 669
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R+D+KL+++SATLDA KFS YF API +PG
Sbjct: 670 AIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 729
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVE+ YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 730 RTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 789
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 790 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 849
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 850 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 909
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 910 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 969
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 970 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQP 1028
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1029 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1087
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1088 KATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1147
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1148 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQ 1182
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1796 (637.3 bits), Expect = 3.5e-185, P = 3.5e-185
Identities = 331/637 (51%), Positives = 465/637 (72%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R++LPI+ RE L+AV E+Q++V++GETGSGKTTQ+ QYL EAGY GK+GCTQ
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQ 560
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G +LG EVGY+IRFEDCTS +T++K+MTDG++LRE L DP L
Sbjct: 561 PRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLS 620
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+YSV+++DEAHERT+STD+L G+ K ++ R +LK+LI+SATL+AEKFS YF A + +
Sbjct: 621 AYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFII 680
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PV+I YTK PE++Y+DA+++T ++IH ++ GDIL+FLTGQ R+
Sbjct: 681 PGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERM 740
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG+ + +LI+ PVY+ LP+E+Q KIF P P G+RKVV+ATNIAETSLTIDGI YV+D
Sbjct: 741 KSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDP 800
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+SK K +NPK GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT ++++ +M +++
Sbjct: 801 GFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSI 860
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNL N +L +K +GI+DLLNFDF+D PP GAL++ G LT++G
Sbjct: 861 PEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLG 920
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFPLDP LSKM++AS CS+EI+T+ A+LSV N VFYRPK K+ LAD + F+
Sbjct: 921 RKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQKKAKFF 979
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
Q + GDH+ LLNVY SWK + +S WC++NF+Q RS++ A+D+R QL +++R +++ S
Sbjct: 980 QPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIIS 1038
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ N ++KAI SGF + ++ N Y T+ Q V++HPSS L WVIYHELV
Sbjct: 1039 AGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELV 1098
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
+TTKEYMR+V + P+WL E+AP ++ D + K+
Sbjct: 1099 MTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKR 1135
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1780 (631.7 bits), Expect = 1.8e-183, P = 1.8e-183
Identities = 333/643 (51%), Positives = 458/643 (71%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+Q++R++LPIY ++++++AV +NQV+V++GETGSGKTTQ+ QYL EAGYT GK+GCTQ
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G +LG EVGY+IRFEDCT TV+KYMTDGM+LRE+L D L
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+M+DEAHERT+ TD+L G+ K L++ R DL+L+++SATLDAEKFS YF I +
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVEI YTK PE++Y+DAA++T L+IH T+ GDILVFLTGQ R+
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG + ELI+ PVY+ LP+E+Q++IF P P G RKVV+ATNIAE SLTIDGI YVVD
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G++K YNPK G+ESL++ PIS+ASA QRAGR+GRTGPGKC+RLYT ++Y+ +M ++
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQR NL L +K +GI+DLL+FDF+D P GAL++ G LTK+G
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFPL+P LSKM++AS CS+EI+T+ A++ GN +FYRP+ K+ AD R F+
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 986
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
Q + GDH+ LL VY +WK ++S WC++NFIQ RS++ A+D+R QL ++++ +++ +
Sbjct: 987 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1045
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ N ++KAI +GF H AR Y T+ Q V++HPSS L Q WVIYH+LV
Sbjct: 1046 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1105
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL--RKKMPRV 642
+TTKEYMR+VT + P+WL E+AP ++ + D + RK+ R+
Sbjct: 1106 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERI 1148
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1774 (629.5 bits), Expect = 7.6e-183, P = 7.6e-183
Identities = 336/636 (52%), Positives = 455/636 (71%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L ++R++LPIY R+ +++AV +NQ+++++GETGSGKTTQI QYL E G+T GK+GCTQ
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQ 638
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G +LG EVGY+IRFEDCTS +T++KYMTDGM+LRE L + +L+
Sbjct: 639 PRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELK 698
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
SYSV+M+DEAHERT+ TD+L G+ K V+ R +LKL+++SATLDA KFS YF API +
Sbjct: 699 SYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTI 758
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVE+ YTK PE++Y+DA+++T ++IH + GDIL+FLTGQ R+
Sbjct: 759 PGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERM 818
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD
Sbjct: 819 KSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDP 878
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+ K K YN KTGM+SL+V PIS+A+A QRAGR+GRTGPGK +RLYT +Y+++M V
Sbjct: 879 GFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPV 938
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNLA +L LK +GI+DLL+FDF+D+PP AL+ G LT++G
Sbjct: 939 PEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLG 998
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFPL+P LSKM++ S +CS+EI+TI ++LSV N VFYRPK+K+ LAD + F
Sbjct: 999 RRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQN-VFYRPKDKQALADQKKAKFN 1057
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
Q + GDH+ LL VYNSWK N +S WCY+NF+Q R++K ++D+R QL +++R +++ S
Sbjct: 1058 QAE-GDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVS 1116
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ N ++KAI SGF + A+ Y T+ Q V++HPSS L WVIYHELV
Sbjct: 1117 AGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELV 1176
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRK 637
TTKEYMR+VT + P+WL E AP ++ D L K
Sbjct: 1177 QTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSK 1212
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1727 (613.0 bits), Expect = 7.3e-178, P = 7.3e-178
Identities = 322/637 (50%), Positives = 455/637 (71%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R++LP++ +REQ+++AV+ENQ++++VGETGSGKTTQ+ QYL EAG+ G +GCTQ
Sbjct: 535 IKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQ 594
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+G +LG EVGY+IRFEDCTS T +KYMTDGM+ RE++ DP L+
Sbjct: 595 PRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLK 654
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+M+DEAHERT++TD+L + K R R DLK++++SATLDA+KFSAYFN PI +
Sbjct: 655 RYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTI 714
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVEI Y+K PES+Y+DAA+ T ++IH + GDIL+FLTGQ R+
Sbjct: 715 PGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERM 774
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG + ELI+ PVY+ LP E+Q++IF P P G+RKVV+ATNIAETS+TID I YVVD
Sbjct: 775 KALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDP 834
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+ K Y+PK GM+SL+V PIS+A A QRAGR+GRTGPGKCFRLYT +YQ +M ++
Sbjct: 835 GFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSI 894
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQR NL+N IL+LK +GI+DLL+FDF+D PP AL+ G LT++G
Sbjct: 895 PEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLG 954
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MA+FP++P LSK+++AS + +CS+E+++I A+L++ N VFYRPK K+ AD + F+
Sbjct: 955 RKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPN-VFYRPKEKQTQADAKKAKFH 1013
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
+ GDH+ LLNVYN+WK++ YSK WC +NFIQFR++ ARD+R+Q+ +++R ++ S
Sbjct: 1014 DPN-GDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMS 1072
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ +++A+ SGF + AR + Y T+ V++HPSS L WVIYH LV
Sbjct: 1073 CGSDTNRVRQALCSGFFRNAARKDQQEGYRTLIEGTPVYLHPSSALFGKHAEWVIYHTLV 1132
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
LTTKEYM T ++P+WL + AP ++ + + L K+
Sbjct: 1133 LTTKEYMHCTTSIEPKWLVDAAPTFFKVSASDKLSKR 1169
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 326/628 (51%), Positives = 447/628 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPI+ ++ ++ A+ +NQ++V+VGETGSGKTTQ+ QY EAG + GK+GCTQP
Sbjct: 535 EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPR 594
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G KLG +VGY+IRFEDCTS+ T++KYMTDGM+LRE L DP L Y
Sbjct: 595 RVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGY 654
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S++M+DEAHERT+ TD+L G+ K R R +LKL+I+SATLD+ KFS YF API +PG
Sbjct: 655 SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PVEI YT+ PES+Y++AA +T ++IH T+ GD+LVFLTGQ R++
Sbjct: 715 RTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKS 774
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
+G + ELI+ PVY LP+E+Q +IF P P G RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 775 MGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGF 834
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YNPK+GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT +++++M VPE
Sbjct: 835 VKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPE 894
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI++L++FDF+D+PP AL+ G LTK+GR+
Sbjct: 895 IQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+P LSK+++ S CS E++TI A+L+V N +FYRPK K+ AD + F+Q
Sbjct: 955 MAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQKKAKFHQP 1013
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK + +S+ WC++NFIQ RSMK A+DIR QL +++R + + S
Sbjct: 1014 E-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCG 1072
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
++ ++KAI SGF + A+ Y T+ Q V++HPSS Q WV+YHELV+T
Sbjct: 1073 RDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMT 1132
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKD 631
TKEYMR+VT + P+WL E AP ++ + D
Sbjct: 1133 TKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 326/628 (51%), Positives = 447/628 (71%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPI+ ++ ++ A+ +NQ++V+VGETGSGKTTQ+ QY EAG + GK+GCTQP
Sbjct: 535 EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPR 594
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G KLG +VGY+IRFEDCTS+ T++KYMTDGM+LRE L DP L Y
Sbjct: 595 RVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGY 654
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S++M+DEAHERT+ TD+L G+ K R R +LKL+I+SATLD+ KFS YF API +PG
Sbjct: 655 SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PVEI YT+ PES+Y++AA +T ++IH T+ GD+LVFLTGQ R++
Sbjct: 715 RTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKS 774
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
+G + ELI+ PVY LP+E+Q +IF P P G RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 775 MGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGF 834
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YNPK+GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT +++++M VPE
Sbjct: 835 VKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPE 894
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI++L++FDF+D+PP AL+ G LTK+GR+
Sbjct: 895 IQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+P LSK+++ S CS E++TI A+L+V N +FYRPK K+ AD + F+Q
Sbjct: 955 MAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQKKAKFHQP 1013
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK + +S+ WC++NFIQ RSMK A+DIR QL +++R + + S
Sbjct: 1014 E-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCG 1072
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
++ ++KAI SGF + A+ Y T+ Q V++HPSS Q WV+YHELV+T
Sbjct: 1073 RDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMT 1132
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKD 631
TKEYMR+VT + P+WL E AP ++ + D
Sbjct: 1133 TKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1712 (607.7 bits), Expect = 2.8e-176, P = 2.8e-176
Identities = 321/643 (49%), Positives = 453/643 (70%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R++LP+Y +R+Q+L AV ENQ++++VG+TGSGKTTQ+ QYL EAG+ G +GCTQ
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGIIGCTQ 629
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+G KLG EVGY+IRFEDCTS +T +KYMTDGM+ RE+L DP L+
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+M+DEAHERT++TD+L G+ K ++ R DL+L+++SATLDA+KFS YF PI +
Sbjct: 690 KYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSI 749
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVEI Y+K PES+Y+DAA++T ++IH T+ GD+L+FLTGQ R+
Sbjct: 750 PGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACEILYERM 809
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG + EL++ PVY+ LP+E+Q++IF P P G RKVV+ATNIAETS+TID I YV+D
Sbjct: 810 KALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDP 869
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+ K K Y+PK GM+SL+V PIS+A A QRAGR+GRTGPGKCFRLYT +YQ +M T+
Sbjct: 870 GFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTI 929
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
P+IQR NL++ IL+LK +GI+DLL+FDF+D PP AL+ G LT++G
Sbjct: 930 PDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLG 989
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MA+FP++P L+K+++AS CS E+++I A+LS+ SVFYRPK K+ AD + F+
Sbjct: 990 RKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSI-QSVFYRPKEKQQQADQKKAKFH 1048
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
GDH+ LLNVYN+WK + +S WCY+NFIQ R ++ A+D+R QL +++R ++ S
Sbjct: 1049 DPH-GDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVS 1107
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
N +++A+ +GF ++AR Y T+ V++HPSS + P VIYH LV
Sbjct: 1108 CGRNTTKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMHPSSAMFGKPAEHVIYHTLV 1167
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL--RKKMPRV 642
LTTKEYM T ++P+WL E AP ++ + + L RKK R+
Sbjct: 1168 LTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTDRLSKRKKAERI 1210
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1669 (592.6 bits), Expect = 1.0e-171, P = 1.0e-171
Identities = 320/618 (51%), Positives = 437/618 (70%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 560 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 619
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 620 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 679
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 680 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 739
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQ R++
Sbjct: 740 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 799
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 800 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 859
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 860 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 919
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP GAL+ G LT++GR+
Sbjct: 920 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1038
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1039 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1097
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL----AQVPKRWVIYHE 599
+ ++KAI SGF + A+ Y T+ Q V++HPSS L + PK ++
Sbjct: 1098 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPECPKHFLPVVA 1157
Query: 600 LVLTTKEYMRQVTELKPE 617
+ ++ ++ + + +L E
Sbjct: 1158 VAVSLEQCLSKFEDLNKE 1175
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1668 (592.2 bits), Expect = 1.3e-171, P = 1.3e-171
Identities = 317/644 (49%), Positives = 450/644 (69%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----V 57
+Q++R+ LP+Y R Q+L A+++NQ VVIVGETGSGKTTQI QY++E G K G +
Sbjct: 329 IQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLI 388
Query: 58 GCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSD 117
GCTQP E+G KLG VGY+IRFED TSE TV+KYMTDGM+ RE L+D
Sbjct: 389 GCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALND 448
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P + YSV+M+DEAHERT++TD+L + K+ + +LK++++SATLD+ KFS YFN P
Sbjct: 449 PNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCP 508
Query: 178 ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXX 237
I+ +PGR +PVE+ YTKAPE +Y+ AA+ + ++IH ++ +GDILVFLTGQ
Sbjct: 509 IITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEAL 568
Query: 238 XXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKY 297
R++ LG I ELI+ PVY+ LP+E+Q +IF PTP G+RKV+LATNIAETS+TIDGI Y
Sbjct: 569 HERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYY 628
Query: 298 VVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDME 357
VVD G+ K+ Y+ K GM+SL V PISKA A QR+GR+GRTGPGKC+RLYT +Y+++M
Sbjct: 629 VVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMI 688
Query: 358 DNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGEL 417
NT+PEIQR NL++ IL+LK +GI DL+NF+F+D P AL+ G L
Sbjct: 689 PNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNL 748
Query: 418 TKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNAR 477
T +GR+MA+ P++P L+K ++ S +++C+ EI++I A+LSV ++FYRPK+K+ LAD +
Sbjct: 749 TTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSV-QTIFYRPKDKQALADQRK 807
Query: 478 MNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI 537
F+ GDH+ LLNV+ SW N+YSK WC DNFIQ RSM+ A ++R QL +++R G
Sbjct: 808 SRFHHS-LGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGY 866
Query: 538 ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIY 597
+ S +++ +++ SG+ ++A+ Q+ Y T+ V++HPSS L ++VIY
Sbjct: 867 KTMSCGNDVDRVRRTFCSGYFKNSAKRQEGEGYKTLNENTLVYLHPSSSLYGKKPQYVIY 926
Query: 598 HELVLTTKEYMRQVTELKPEWLFEIAPHYYM---LKDVEDLRKK 638
H L+LT+KEYM V+ + P WL+E+AP Y+ K V++++KK
Sbjct: 927 HTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPADAKTVQEIKKK 970
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1663 (590.5 bits), Expect = 4.4e-171, P = 4.4e-171
Identities = 304/641 (47%), Positives = 450/641 (70%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+ +R+TLP+Y R ++++AV++NQ +VIVGETGSGKTTQI QYL E G++ +G +GCTQ
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQ 535
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+G K+GH+VGY+IRFED T T +KYMTDGM+ RE L DP++
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+M+DEAHERT++TD+L + K R +LK++++SATL++ KFS YF PI+ +
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PG+ +PVE+ Y++ P+ +YI+AA+ ++IH + GDILVFLTGQ R+
Sbjct: 656 PGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG IGEL++ PVY+ LP+E+Q+KIF PTP G+RKVV ATNIAETS+TIDGI YVVD
Sbjct: 716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDP 775
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G++K+ YN + G+E L+V PIS+A A QR GR+GRTGPGKC+RLYT +++ +M +NTV
Sbjct: 776 GFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTV 835
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQR NL++ IL+LK +GI+DLL FDF+D PP+ +L+ G+LT +G
Sbjct: 836 PEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLG 895
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
++M+ FP+DP LS+ +++S +CS+EI+TI ++LSV N VFYRPK+++ AD+ + F+
Sbjct: 896 KEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSKKAKFH 954
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
GDH+ LLNVY W++ +YS+Q+C NF+ FR +K ARD++ Q++ + +++G++L S
Sbjct: 955 H-PYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLIS 1013
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ + ++K +SGF ++ A+ Y T+ +V +HPSS L +V+YH +V
Sbjct: 1014 CHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIV 1073
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
LT++EYM QVT ++P+WL E+APH+Y D E +K ++
Sbjct: 1074 LTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKKAKI 1114
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
Identities = 314/642 (48%), Positives = 443/642 (69%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+ ++R LPIY+ + +++A+++N V++++GETGSGKTTQIPQYLHEA YT+ G VGCTQ
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQ 683
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G LG EVGYSIRF+DCTS T++KY+TDGM+LRE LSD L
Sbjct: 684 PRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLT 743
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERT+STDIL + KD+VR R+D KL+++SATLDAEKFS YF +PI +
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PG+ +PVEI ++K PES+Y++A+++T L IH + GDILVFLTGQ R+
Sbjct: 804 PGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERM 863
Query: 242 RKLGTKIGE-LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+KL + LI+ P+Y++LP+E+Q+ IF P P G RK +LATNIAE SLTIDGI +V+D
Sbjct: 864 KKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVID 923
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K+K Y+ K M+SL+V PISKA+A QRAGR+GRTGPGKC+RLYT +Y+ +M + +
Sbjct: 924 PGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMS 983
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQR NL +++L+LK LGI+D L+FDF+DSP GAL+ G LTK+
Sbjct: 984 VPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKL 1043
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
G++MA FP++P LSK+++ S F C+++++TI ++LSV N +FYRP+NK LAD + F
Sbjct: 1044 GKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKKKNKF 1102
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
GD I LN+YN WKEN +S WC++NFIQ R++K A+D+R Q+ + E+ ++
Sbjct: 1103 IMPQ-GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVK 1161
Query: 541 SSLCNLEAMK-----KAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV 595
S +A K K+I SG+ H + Y T+ Q+V +HPSS L +V
Sbjct: 1162 KSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNPLFV 1221
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRK 637
+YHELVLT KEY+R T ++P+WL ++AP+ ++ D + + K
Sbjct: 1222 VYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISK 1263
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
Identities = 314/642 (48%), Positives = 443/642 (69%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+ ++R LPIY+ + +++A+++N V++++GETGSGKTTQIPQYLHEA YT+ G VGCTQ
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQ 683
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G LG EVGYSIRF+DCTS T++KY+TDGM+LRE LSD L
Sbjct: 684 PRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLT 743
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERT+STDIL + KD+VR R+D KL+++SATLDAEKFS YF +PI +
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PG+ +PVEI ++K PES+Y++A+++T L IH + GDILVFLTGQ R+
Sbjct: 804 PGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERM 863
Query: 242 RKLGTKIGE-LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+KL + LI+ P+Y++LP+E+Q+ IF P P G RK +LATNIAE SLTIDGI +V+D
Sbjct: 864 KKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVID 923
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K+K Y+ K M+SL+V PISKA+A QRAGR+GRTGPGKC+RLYT +Y+ +M + +
Sbjct: 924 PGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMS 983
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQR NL +++L+LK LGI+D L+FDF+DSP GAL+ G LTK+
Sbjct: 984 VPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKL 1043
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
G++MA FP++P LSK+++ S F C+++++TI ++LSV N +FYRP+NK LAD + F
Sbjct: 1044 GKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKKKNKF 1102
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
GD I LN+YN WKEN +S WC++NFIQ R++K A+D+R Q+ + E+ ++
Sbjct: 1103 IMPQ-GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVK 1161
Query: 541 SSLCNLEAMK-----KAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV 595
S +A K K+I SG+ H + Y T+ Q+V +HPSS L +V
Sbjct: 1162 KSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKNPLFV 1221
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRK 637
+YHELVLT KEY+R T ++P+WL ++AP+ ++ D + + K
Sbjct: 1222 VYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISK 1263
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1640 (582.4 bits), Expect = 1.2e-168, P = 1.2e-168
Identities = 329/649 (50%), Positives = 440/649 (67%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
L K+R LP++ Y+ +R + +Q +V+VGETGSGKTTQIPQ+ + +K K V CT
Sbjct: 65 LYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCT 124
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EM VKLG EVGYSIRFEDC++ KT+LKYMTDGM+LRE +SDP L
Sbjct: 125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPML 184
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
+ Y V+++DEAHERTL+TDIL+G+ K+++R RSDLKL++ SATLDA KF YF+ AP+++
Sbjct: 185 DQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMK 244
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXXX 239
VPGR +PVEI YT PE +Y++AAI T ++IH + GDIL+FLTGQ
Sbjct: 245 VPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKR 304
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTID 293
I LG++IGEL P+Y+ LP LQ +IF P P +GA RKVV++TNIAETSLTID
Sbjct: 305 EIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTID 364
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
G+ +V+D G++K K YNP+ +ESLLV PISKASA QR+GR+GRT PGKCFRLYT +++
Sbjct: 365 GVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFK 424
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQ 413
+M+DNT PEI R+NL V+L LK LGIDDL++FDF+D P AL+
Sbjct: 425 NEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDD 484
Query: 414 VGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLA 473
G LT +G M+EFPLDP L+KM++AS + CSNEI++I A+LSV F RP K A
Sbjct: 485 DGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQC-FVRPNEAKKAA 543
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
D A+M F D GDH+ LLNVY+++K++ WCY+NFI FRS+K A ++R QL +++
Sbjct: 544 DEAKMRFAHID-GDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMD 602
Query: 534 RVGIELTSSLCNLEA----MKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQ 589
R + TS+ + ++KA++ GF + A L++ G Y T+K Q V +HPS+ L
Sbjct: 603 RFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCLDH 662
Query: 590 VPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
P WVIY+E VLTTK Y+R VT++KPEWL +AP YY L + K
Sbjct: 663 KPD-WVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNNFPQCEAK 710
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1639 (582.0 bits), Expect = 1.5e-168, P = 1.5e-168
Identities = 309/522 (59%), Positives = 398/522 (76%)
Query: 125 VLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGR 184
V+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SAT+D +FS +F+ AP+ R+PGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 185 RYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKL 244
R+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R R+L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 245 GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYS 304
G+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D G+
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 305 KMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEI 364
K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ TVPEI
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 274
Query: 365 QRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQM 424
QRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT GR+M
Sbjct: 275 QRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKM 334
Query: 425 AEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGD 484
AE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF+
Sbjct: 335 AELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL-P 393
Query: 485 AGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLC 544
GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+S
Sbjct: 394 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 453
Query: 545 NLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTT 604
+ ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHELVLTT
Sbjct: 454 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 512
Query: 605 KEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
KE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 513 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGK 554
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1639 (582.0 bits), Expect = 1.5e-168, P = 1.5e-168
Identities = 309/522 (59%), Positives = 398/522 (76%)
Query: 125 VLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGR 184
V+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SAT+D +FS +F+ AP+ R+PGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 185 RYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKL 244
R+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R R+L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 245 GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYS 304
G+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D G+
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 305 KMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEI 364
K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ TVPEI
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 274
Query: 365 QRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQM 424
QRT+L NV+L+LK+LGI DL++FDFLD PP GALN +GELT GR+M
Sbjct: 275 QRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKM 334
Query: 425 AEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGD 484
AE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF+
Sbjct: 335 AELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL-P 393
Query: 485 AGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLC 544
GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+S
Sbjct: 394 GGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQG 453
Query: 545 NLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTT 604
+ ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHELVLTT
Sbjct: 454 DYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTT 512
Query: 605 KEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
KE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 513 KEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGK 554
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1637 (581.3 bits), Expect = 2.5e-168, P = 2.5e-168
Identities = 297/642 (46%), Positives = 456/642 (71%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R+ LPI+ R +++ ++EN V++IVGETGSGKTTQ+ QYL+E GY+K GK+GCTQ
Sbjct: 652 IKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCTQ 711
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM V LG+EVGYSIRFEDCTS +T +KYMTDG++LRE +DP L+
Sbjct: 712 PRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNLD 771
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHER+L+TD+L GI K ++ R D+KL+++SAT+D++KFS +F P+ +
Sbjct: 772 KYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTI 831
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PV++ ++K P +Y+D+A+ L IH TQ GDILVF+TGQ RI
Sbjct: 832 PGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEERI 891
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
++LG + L + P+Y+ LP+++QAKIF +G+RK ++ATNIAETSLT+DGI YV+D+
Sbjct: 892 KQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDT 951
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
GY K+K YNP+ GM+SL V PISKA+A QR+GR+GRTGPG+C+RLYT ++++ ++ DN +
Sbjct: 952 GYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNI 1011
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNL NV+L LK++G+ +LL+FDF+D PPQ GAL+ G++T +G
Sbjct: 1012 PEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLG 1071
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
++M+EFPLDP LSKM++ +++ C +I+TI ++LS+ SVFYRPK + +D +R F+
Sbjct: 1072 KRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMP-SVFYRPKGAEEESDASREKFF 1130
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
++ DH+ LL+VY WK N+YS QWC +++I ++M+ R++R QL ++ + +++ S
Sbjct: 1131 VPES-DHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVES 1189
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYH 598
N + ++KAI S + H+A+++ G Y +++ +HP+S GL P +++YH
Sbjct: 1190 CGSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPD-YIVYH 1248
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK-DVEDLRKKM 639
ELV+T+KEYM+ VT + P WL E+ P ++ +K ++D ++K+
Sbjct: 1249 ELVMTSKEYMQIVTAVDPNWLAEMGPMFFSIKKSLKDKKRKL 1290
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1625 (577.1 bits), Expect = 4.7e-167, P = 4.7e-167
Identities = 313/638 (49%), Positives = 435/638 (68%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
++++R+ LP++ R+Q L AV +NQ++V++GETGSGKTTQI QYL E GYT K +GCT
Sbjct: 503 MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCT 562
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E+G ++G EVGY+IRFED TS T +KYMTDGM+ RE L DP L
Sbjct: 563 QPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
YSV+++DEAHERT++TD+L G+ K V R DLKL+++SATLDAE+FS+YF PI
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFT 682
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGR YPVEI YTK PE++Y+DAA++T ++IH ++ GDILVFLTGQ R
Sbjct: 683 IPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYER 742
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+ LG I EL++ PVY+ LP+E+Q++IF P P G RKVV+ATNIAETSLTIDGI YVVD
Sbjct: 743 SKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K ++PK GM+SL+V PIS+A A QR+GR+GRTGPGKC+RLYT ++Y+ +M +
Sbjct: 803 PGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSP 862
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
+PEIQR NL++ IL+LK +GI+DLLNFDF+D PP AL+ G LT +
Sbjct: 863 IPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPL 922
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MA+FP++P LSK+++ S + CS E+++I A+LSV N ++ RP+ K+ AD R F
Sbjct: 923 GRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEADRQRAQF 981
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
++ DH+ LLNVY +WK N S WCY+++IQ R M+ A D+R QL L++R +
Sbjct: 982 ANPES-DHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVV 1040
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKN-GSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHE 599
S E + +A+ SG+ + A+ + G Y T+ V++HPS L WVIYHE
Sbjct: 1041 SCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHE 1100
Query: 600 LVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRK 637
L+ T+KEYM V+ + P+WL E+AP ++ + + K
Sbjct: 1101 LIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSK 1138
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1546 (549.3 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 312/609 (51%), Positives = 414/609 (67%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCTQPXX 64
RK+LP+Y YRE+ L+ + ENQ +++VGETGSGKTTQ+PQYLHEAGY+++ +V CTQP
Sbjct: 226 RKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRR 285
Query: 65 XXXXXXXXXXXXEMGVKLGHEVGYSIRFED-CTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EM VKLG +VGY+IRF+D C TV+KY+TDGM+LRE L DP L Y
Sbjct: 286 VAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKY 345
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRL--RSDLKLLISSATLDAEKFSAYFNFAPILRV 181
S +M+DEAHERTLST+ILL + KD++ + DLK++I+SAT++AEKFS +FN APIL +
Sbjct: 346 SAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNI 405
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQXXXXXXXXXXXXR 240
PGRR+PV+IHYTK PE+NYI AAI T +IH TQ GDILVFLTGQ
Sbjct: 406 PGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEEILRDS 465
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
I KLG +I +IVC +YANLP ELQ KIF PTP RK+VLATNIAETS+TIDGI YV+D
Sbjct: 466 ILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGISYVID 525
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
GY K YNP TGMESL+V P S+ASA QRAGR+GR GPGKCFRL+T S+ +++ N
Sbjct: 526 PGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNELDSNQ 585
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
PEIQR NL +VIL+L +LGI+DLL F+F+D P + GALN G+LTK
Sbjct: 586 QPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQGKLTKT 645
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
G++M+EFPLDP+ +K I+ SDKF + +II+I A+L+ +++FYRPK+KK LAD + F
Sbjct: 646 GKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELADKRKQEF 705
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
GD LL ++ W ++ YS QWC D FIQ+++MK ++I +QL L +++GIE+
Sbjct: 706 NDLQ-GDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVN 764
Query: 541 S----------SLCNLEAMKKAIISGFLLHTARLQKNGS-YWTVKHPQ-----KVHVHPS 584
S + N + K +ISGF + +L G Y + + + ++HPS
Sbjct: 765 SRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPS 824
Query: 585 SGLAQV-PK 592
S + ++ PK
Sbjct: 825 SCIYKLKPK 833
Score = 98 (39.6 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 545 NLEAMKKAIISGFLLHTARLQKNGS-YWTVKHPQ-----KVHVHPSSGLAQV-PK-RWVI 596
N + K +ISGF + +L G Y + + + ++HPSS + ++ PK ++++
Sbjct: 779 NNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLL 838
Query: 597 YHELVLTTKEYMR 609
Y+ELVLT+KEYMR
Sbjct: 839 YYELVLTSKEYMR 851
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
Identities = 324/659 (49%), Positives = 446/659 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK---VGCT 60
K+R LP++ Y+E+ + +Q V+VGETGSGKTTQIPQ+ + + G V CT
Sbjct: 106 KKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACT 165
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP L
Sbjct: 166 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 225
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
E Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 226 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLT 285
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQAS-GDILVFLTGQXXXXXXXXXXXX 239
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 286 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKR 345
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTID 293
I LG +G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTID
Sbjct: 346 EIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTID 405
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
G+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y+
Sbjct: 406 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 465
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQ 413
+M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 466 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 525
Query: 414 VGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLA 473
G+LT++G MAEFPLDP L+KM++AS F CSNE+++I A+LSV F RP K A
Sbjct: 526 DGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 584
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
D ++M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ +++
Sbjct: 585 DESKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 643
Query: 534 RVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
R + E TS + +++A+++GF + A L++ G Y TVK Q V +HPS+ L
Sbjct: 644 RFNLPRRSTEFTSRDYYIN-IRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLD 702
Query: 589 QVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 703 HKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAK 760
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 324/660 (49%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+E+ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 99 KKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRG-VAC 157
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 158 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 217
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR R+DLK+++ SATLDA KF YF+ P+L
Sbjct: 218 LERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLL 277
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 278 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 337
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
I LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 338 REIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 397
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 398 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 457
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 458 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 517
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 518 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 576
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 577 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 635
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 636 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 694
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 695 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 753
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 323/660 (48%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 728 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 323/660 (48%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 728 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 323/660 (48%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 728 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 323/660 (48%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 728 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 323/660 (48%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 728 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1614 (573.2 bits), Expect = 6.8e-166, P = 6.8e-166
Identities = 323/660 (48%), Positives = 447/660 (67%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQXXXXXXXXXXX 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQ
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGI-----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL 587
+R + + TS + ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYIN-IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL 727
Query: 588 AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMPRVAGR 645
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + + ++++ R+ +
Sbjct: 728 DHKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
Identities = 317/655 (48%), Positives = 446/655 (68%)
Query: 1 MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH---GK- 56
+L+K R+ LP++ ++ L + NQ +++VGETGSGKTTQIPQ++ +A + G+
Sbjct: 58 ILEK-RRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 57 --VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREM 114
VGCTQP EM V +G EVGYSIRFEDCTS +T+LKY+TDGM+LRE
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 176
Query: 115 LSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN 174
++DP LE Y V+++DEAHERTL+TD+L G+ K+++R R DLKL++ SATL+AEKF YF+
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 236
Query: 175 FAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXX 234
AP+++VPGR +PVEI YT+ PE +Y++AAI T ++IH + GDILVFLTG+
Sbjct: 237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC 296
Query: 235 XXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA---RKVVLATNIAE 287
+ LG ++G + V P+Y+ LP +Q KIF P P +G RK+V++TNIAE
Sbjct: 297 RKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAE 356
Query: 288 TSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLY 347
TSLTIDGI YV+D G++K K YNP+ +ESLLV PISKASA QR+GR+GRT PGKCFRLY
Sbjct: 357 TSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLY 416
Query: 348 TINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXX 407
T S+ D++ T PEI R+NLAN +L LK LGIDDL++FDF+D P
Sbjct: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
Query: 408 XGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK 467
GAL+ G LTK G M+EFPLDP +SKM++ S +F CSNEI++++A+LSV N F RP+
Sbjct: 477 LGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNC-FVRPR 535
Query: 468 NKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQ 527
+ AD A+ F D GDH+ LLNVY+++K+N+ WC++NF+ R+MK A ++R Q
Sbjct: 536 EAQKAADEAKARFGHID-GDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQ 594
Query: 528 LTCLVERVGIELTSSLCNLEA----MKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHP 583
L ++ R +++ S+ N ++KA+++G+ + A L++ G Y TVK Q VH+HP
Sbjct: 595 LVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHP 654
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
S+ L P+ WVIY+E VLTT+ ++R VT+++ EWL ++A HYY L + + K
Sbjct: 655 SNCLDHKPE-WVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAK 708
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1610 (571.8 bits), Expect = 1.8e-165, P = 1.8e-165
Identities = 319/655 (48%), Positives = 449/655 (68%)
Query: 1 MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEA--GYT--KHGK 56
+L+K R+TLP++ +E+ L+ + NQ +++VGETGSGKTTQIPQ++ +A T K K
Sbjct: 54 ILEK-RRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRK 112
Query: 57 --VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREM 114
VGCTQP EM V +G EVGYSIRFEDC+S +TVLKY+TDGM+LRE
Sbjct: 113 WLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREA 172
Query: 115 LSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN 174
++DP LE Y V+++DEAHERTL+TD+L G+ K++++ R DLKL++ SATL+AEKF YF+
Sbjct: 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFS 232
Query: 175 FAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXX 234
AP+++VPGR +PVEI YT+ PE +Y++AAI T ++IH + GDILVFLTG+
Sbjct: 233 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC 292
Query: 235 XXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPD-----G--ARKVVLATNIAE 287
+ LG ++G + V P+Y+ LP +Q KIF P P+ G RK+V++TNIAE
Sbjct: 293 RKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAE 352
Query: 288 TSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLY 347
TSLTIDGI YV+D G++K K YNP+ +ESLLV PISKASA QR+GR+GRT PGKCFRLY
Sbjct: 353 TSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLY 412
Query: 348 TINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXX 407
T S+ D++ T PEI R+NLAN +L LK LGIDDL++FDF+D P
Sbjct: 413 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 472
Query: 408 XGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK 467
GAL+ G LTK G M+EFPLDP ++KM++ S +F CSNEI++++A+LSV N F RP+
Sbjct: 473 LGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNC-FIRPR 531
Query: 468 NKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQ 527
+ AD A+ F + GDH+ LLNVY+++K+N+ WCY+NFI R+MK A ++R Q
Sbjct: 532 EAQKAADEAKARFGHIE-GDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQ 590
Query: 528 LTCLVERVGIELTSSLCNLEA----MKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHP 583
L ++ R +++ S+ N ++KA+++G+ + A L++ G Y TVK Q VH+HP
Sbjct: 591 LVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHP 650
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
S+ L P+ WVIY+E VLT++ ++R VT+++ EWL ++A HYY L + + K
Sbjct: 651 SNCLDHKPE-WVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAK 704
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1607 (570.8 bits), Expect = 3.8e-165, P = 3.8e-165
Identities = 301/643 (46%), Positives = 440/643 (68%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 586
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 646
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+A+F PI +PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPG 706
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQ + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 766
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 767 L-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 825
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 826 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 885
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT GR
Sbjct: 886 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 945
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVP 1004
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH+ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1005 ES-DHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1063
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1064 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1122
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1123 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRA 1165
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1606 (570.4 bits), Expect = 4.8e-165, P = 4.8e-165
Identities = 301/643 (46%), Positives = 440/643 (68%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 526 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 585
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 586 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 645
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+A+F PI +PG
Sbjct: 646 SAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPG 705
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQ + +
Sbjct: 706 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 765
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 766 L-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 824
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 825 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 884
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT GR
Sbjct: 885 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 944
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 945 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVP 1003
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH+ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1004 ES-DHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1062
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1063 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1121
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1122 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRA 1164
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 300/643 (46%), Positives = 441/643 (68%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 586
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 646
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+++F PI +PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 706
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQ + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 766
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 767 L-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 825
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 826 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 885
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT GR
Sbjct: 886 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 945
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVP 1004
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH++ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1005 ES-DHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1063
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1064 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1122
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1123 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRA 1165
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 306/645 (47%), Positives = 438/645 (67%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L ++R+ LPI+ R+Q+L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G VGCTQ
Sbjct: 556 LLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVGCTQ 615
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM LG EVGY+IRFEDCTSEKT++KYMTDG++LRE L + L+
Sbjct: 616 PRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLD 675
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+D++KF+++F PI +
Sbjct: 676 HYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHI 735
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PV+I ++K P+ +Y++AA+ L+IH + GDIL+F+ GQ R+
Sbjct: 736 PGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERL 795
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +VVDS
Sbjct: 796 ADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDS 854
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
GY K+K +NP+ GM++L VYPIS+A+A QRAGR+GRTGPG+C+RLYT ++++ +M T+
Sbjct: 855 GYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTI 914
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT G
Sbjct: 915 PEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTG 974
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R M EFPLDP LSKM++ S CS +I+ I ++LSV S+FYRPK ++ +D R F
Sbjct: 975 RLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVP-SIFYRPKGREEESDQVREKFS 1033
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
++ DH+ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1034 VPES-DHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLIS 1092
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYH 598
+ + ++K I + + A+L+ G Y V+ H+HP+S G+ P ++IYH
Sbjct: 1093 CGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSALFGMGYTPD-YIIYH 1151
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
ELV+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1152 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRA 1196
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1604 (569.7 bits), Expect = 7.9e-165, P = 7.9e-165
Identities = 300/643 (46%), Positives = 440/643 (68%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 66 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 125
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 126 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 185
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+++F PI +PG
Sbjct: 186 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 245
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQ + +
Sbjct: 246 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 305
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 306 L-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 364
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 365 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 424
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT GR
Sbjct: 425 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 484
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 485 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVP 543
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH+ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 544 ES-DHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 602
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 603 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 661
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 662 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRA 704
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1601 (568.6 bits), Expect = 1.6e-164, P = 1.6e-164
Identities = 299/643 (46%), Positives = 440/643 (68%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLH+ GYT +G +GCTQP
Sbjct: 528 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIGCTQPR 587
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 588 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 647
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DA+KF+A+F PI +PG
Sbjct: 648 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPG 707
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQ + +
Sbjct: 708 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 767
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 768 L-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 826
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 827 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 886
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT GR
Sbjct: 887 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 946
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 947 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVP 1005
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH+ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1006 ES-DHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1064
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1065 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1123
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1124 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRA 1166
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1569 (557.4 bits), Expect = 4.0e-161, P = 4.0e-161
Identities = 298/634 (47%), Positives = 436/634 (68%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L+++R+ LP + RE +LR +++NQVVV+VGETGSGKTTQ+ Q+L+E GY K G +GCTQ
Sbjct: 181 LREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMIGCTQ 240
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM V LG VGY+IRFEDCT T +KYMTDG++LRE L L+
Sbjct: 241 PRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQTDLD 300
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHER L+TD+L+G+ K ++ R DLKL+++SAT++AE+FS +F AP +
Sbjct: 301 KYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEFII 360
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PV++H+++ P +Y+D+A+ L IH +Q GDILVF+TGQ R+
Sbjct: 361 PGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERL 420
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ L +L + P+Y+ +P E QAKIF G RKV++ATNIAETSLT+DGI +VVDS
Sbjct: 421 KLLNDP-PKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDS 479
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
GYSK+K YNPK GM++L + PIS+A+A QR+GR+GRTGPGK +RLYT +Y+ +M T+
Sbjct: 480 GYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTI 539
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRT+L+N +L+LK+LG+ DLL+FDF+D PPQ GAL+ +G+LT +G
Sbjct: 540 PEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTHLG 599
Query: 422 RQMAEFPLDPMLSKMIV-ASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
RQM FP+DP L+K+I+ A++++ CS E++TI ++LSV N VFYRPK ++ +D AR F
Sbjct: 600 RQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPN-VFYRPKERQEESDAAREKF 658
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ ++ DH+ LL+VY WK N YS WC +F+ ++++ A+++RDQL ++ + L
Sbjct: 659 FVPES-DHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQKLPLI 717
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIY 597
S + + ++K I SGF AR++ G + ++ + +HP+S GL VP+ +V+Y
Sbjct: 718 SCGTDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPTSALYGLGYVPE-YVVY 776
Query: 598 HELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
HEL+LT+KEYM VT + P WL E+ +Y +K+
Sbjct: 777 HELILTSKEYMSTVTAVDPHWLAELGGVFYSVKE 810
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1565 (556.0 bits), Expect = 1.1e-160, P = 1.1e-160
Identities = 288/633 (45%), Positives = 431/633 (68%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+ ++R+ LP++ R+++L ++EN V++IVGETGSGKTTQ+ QYLHE GY+K G +GCTQ
Sbjct: 527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQ 586
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM +LG +VGY+IRFEDCTSE+TV+KYMTDG++LRE L DP+L+
Sbjct: 587 PRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELD 646
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
SYS +++DEAHER+LSTD+L G+ +++V R DLKL+++SAT+D+ KF+ +F P +
Sbjct: 647 SYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTI 706
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PV++ ++K +Y+++A+ L++H T GD+L+F+ GQ R+
Sbjct: 707 PGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERL 766
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
++ L + P+Y+ LP++LQAKIF + DG RK V+ATNIAETSLT+DGI YV+DS
Sbjct: 767 AEIDNAPA-LSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDS 825
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
GY K+K YNP+ GM++L +YPIS+A+A QR+GR+GRTGPG+ +RLYT Y++++ TV
Sbjct: 826 GYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTV 885
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNLAN +L+LK+LG+ DLL F F+D PPQ GAL+ G LT +G
Sbjct: 886 PEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLG 945
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
RQMAEFPLDP +M++ + + CS E++ I ++LSV S+FYRPK ++ AD R F
Sbjct: 946 RQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVP-SIFYRPKGREDEADGVREKFQ 1004
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
+ ++ DH+ LNVY W++N+YS WC ++FI ++M+ R++R QL ++ + + + S
Sbjct: 1005 RPES-DHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVIS 1063
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYH 598
+ + ++K I S + ARL+ G Y ++ H+HP+S GL P +V+YH
Sbjct: 1064 CGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPD-YVVYH 1122
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
EL++T KEYM+ T + WL E+ P ++ +K+
Sbjct: 1123 ELIMTAKEYMQCATAVDGYWLAELGPMFFSVKE 1155
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1563 (555.3 bits), Expect = 1.7e-160, P = 1.7e-160
Identities = 322/661 (48%), Positives = 436/661 (65%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE-AGYTKHGK------ 56
++R LP++ Y+E+ + ++ NQ + +VGETGSGKTTQIPQ+ E + G+
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 57 -VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
V CTQP EM V LG EVGYSIRFEDC SE+TVLKY TDGM+LRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
+ P L+ Y VL++DEAHERTL+TDIL+G+ K++VR R+D+K++I SATLDA KF YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 176 APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQ-ASGDILVFLTGQXXXXXXX 234
P+L VPGR +PVEI +T E +Y++AAI T ++IH + GDIL+FLTGQ
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 235 XXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAET 288
I+ LG G L P+Y+ LP Q +IF P P +GA RK V++TNIAET
Sbjct: 311 KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 289 SLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYT 348
SLTIDG+ +V+D G+SK K YNP+ +ESLLV PISKASAMQRAGR+GRT PGKCFRLYT
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 349 INSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXX 408
+Y +M+D T PEI R+NL +V+L LK LG +DL++FDF+D P
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYL 490
Query: 409 GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN 468
A+N GELT++G MAEFPLDP L+KM++ S + CSNEI++I A+LSV + RP
Sbjct: 491 QAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNE 549
Query: 469 KKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQL 528
+ AD A+ F D GDH+ LLNVY+S+K+N QWCYDNFI +R+MK A +R QL
Sbjct: 550 MRTEADEAKARFAHID-GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
Query: 529 TCLVE-----RVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHP 583
+ +++ RV + S L ++KA+++GF + A L+++G Y TVK Q V++HP
Sbjct: 609 SRVMDKYNLRRVSTDFKSRDYYLN-IRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED--LRKKMPR 641
S+ L P+ W +Y+E VLTTK ++R VT+++PEWL +IAP YY L + D ++K+
Sbjct: 668 STVLDHKPE-WALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTT 726
Query: 642 V 642
V
Sbjct: 727 V 727
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1563 (555.3 bits), Expect = 1.7e-160, P = 1.7e-160
Identities = 322/661 (48%), Positives = 436/661 (65%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE-AGYTKHGK------ 56
++R LP++ Y+E+ + ++ NQ + +VGETGSGKTTQIPQ+ E + G+
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 57 -VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
V CTQP EM V LG EVGYSIRFEDC SE+TVLKY TDGM+LRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
+ P L+ Y VL++DEAHERTL+TDIL+G+ K++VR R+D+K++I SATLDA KF YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 176 APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQ-ASGDILVFLTGQXXXXXXX 234
P+L VPGR +PVEI +T E +Y++AAI T ++IH + GDIL+FLTGQ
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 235 XXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAET 288
I+ LG G L P+Y+ LP Q +IF P P +GA RK V++TNIAET
Sbjct: 311 KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 289 SLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYT 348
SLTIDG+ +V+D G+SK K YNP+ +ESLLV PISKASAMQRAGR+GRT PGKCFRLYT
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 349 INSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXX 408
+Y +M+D T PEI R+NL +V+L LK LG +DL++FDF+D P
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYL 490
Query: 409 GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN 468
A+N GELT++G MAEFPLDP L+KM++ S + CSNEI++I A+LSV + RP
Sbjct: 491 QAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNE 549
Query: 469 KKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQL 528
+ AD A+ F D GDH+ LLNVY+S+K+N QWCYDNFI +R+MK A +R QL
Sbjct: 550 MRTEADEAKARFAHID-GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
Query: 529 TCLVE-----RVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHP 583
+ +++ RV + S L ++KA+++GF + A L+++G Y TVK Q V++HP
Sbjct: 609 SRVMDKYNLRRVSTDFKSRDYYLN-IRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED--LRKKMPR 641
S+ L P+ W +Y+E VLTTK ++R VT+++PEWL +IAP YY L + D ++K+
Sbjct: 668 STVLDHKPE-WALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTT 726
Query: 642 V 642
V
Sbjct: 727 V 727
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1557 (553.2 bits), Expect = 7.5e-160, P = 7.5e-160
Identities = 285/633 (45%), Positives = 445/633 (70%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R+ LP + RE ++R +++NQV+++VGETGSGKTTQ+ Q+L+E GY + G +GCTQ
Sbjct: 296 IREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQ 355
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM VKLG VGY+IRFEDCTS+ TV+KYMTDG++LRE L++P L+
Sbjct: 356 PRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLD 415
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHER L+TD+L+G+FK +++ R DLKL+++SAT++A++FS +F AP +
Sbjct: 416 RYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTI 475
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PV++ ++++P +Y+D A+ L IH + +GDILVF+TGQ R+
Sbjct: 476 PGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRERL 535
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
L +L + P+Y+ +P +LQAKIF P G RK ++ATNIAETSLT+DGI YVVD+
Sbjct: 536 DALNDP-PKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDA 594
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
GYSK+K YNPK GM++L + PIS+A+A QR+GR+GRTGPGK FRL+T ++++++ T+
Sbjct: 595 GYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTI 654
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEIQRTNL+N IL++K+LG+ D+L+FDF+D PPQ GAL+ +G++T +G
Sbjct: 655 PEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLG 714
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+M FP+DP L+K+I+ ++++ C+ E+ITI ++LSV N VFYRPK ++ +D AR F+
Sbjct: 715 RKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPN-VFYRPKERQEESDAAREKFF 773
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
++ DH+ L+VY+ WK N +S WC +F+ +S++ A+++RDQL +++ +++ S
Sbjct: 774 VPES-DHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQKMDIVS 832
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYH 598
+ + +++ I SG+ A+++ G Y ++ V +HP+S GL +P +V+YH
Sbjct: 833 CGTDWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPD-YVVYH 891
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
EL+LT+KEYM VT + P WL ++ +Y +K+
Sbjct: 892 ELILTSKEYMSTVTSVDPMWLADLGGVFYSVKE 924
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1556 (552.8 bits), Expect = 9.6e-160, P = 9.6e-160
Identities = 290/642 (45%), Positives = 440/642 (68%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R+ LP++ R++++ ++EN VV+IVGETGSGKTTQ+ QYL E G+ G +GCTQ
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQ 493
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EMGV LG +VGY+IRFEDCTSEKT++KYMTDG++LRE L D L+
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF-APILR 180
YS +++DEAHER+L+TD+L G+ ++++ R+DLKL+++SAT+DA+KF+ +F P
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGR +PVE+ + + P +Y+DAA+ + IH GDIL+F+ GQ +
Sbjct: 614 IPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEK 673
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+ +L + L V P+Y+ LP++LQAKIF P G RK ++ATNIAETSLT+DGI +V+D
Sbjct: 674 LGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVID 732
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ KMK YNP+ GM++L ++P+S+ASA QR GR+GRTGPG+C+RLYT +++++ +T
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKST 792
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRTNLANV+L+LK+LG+DDLL F F+D+PPQ GAL+ G+LT +
Sbjct: 793 VPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPM 852
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+M EFPLDP LSKM++ S + CS+E++TI ++LSV ++F+RPK ++ AD A+
Sbjct: 853 GRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEAD-AKKEK 910
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+Q DH+ LNVY W+ + YS +WC DN++ +++K R++R QL +++ + + L
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLI 970
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIY 597
S+ + ++K I S + + ARL+ G Y V+ +HP+S G+ +P +V+Y
Sbjct: 971 SNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPD-YVVY 1029
Query: 598 HELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKM 639
HEL++T KEYM+ VT + WL E+ P +Y +K+ + RK++
Sbjct: 1030 HELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKEL 1071
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1556 (552.8 bits), Expect = 9.6e-160, P = 9.6e-160
Identities = 290/642 (45%), Positives = 440/642 (68%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R+ LP++ R++++ ++EN VV+IVGETGSGKTTQ+ QYL E G+ G +GCTQ
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQ 493
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EMGV LG +VGY+IRFEDCTSEKT++KYMTDG++LRE L D L+
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF-APILR 180
YS +++DEAHER+L+TD+L G+ ++++ R+DLKL+++SAT+DA+KF+ +F P
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGR +PVE+ + + P +Y+DAA+ + IH GDIL+F+ GQ +
Sbjct: 614 IPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEK 673
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+ +L + L V P+Y+ LP++LQAKIF P G RK ++ATNIAETSLT+DGI +V+D
Sbjct: 674 LGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVID 732
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ KMK YNP+ GM++L ++P+S+ASA QR GR+GRTGPG+C+RLYT +++++ +T
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKST 792
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKV 420
VPEIQRTNLANV+L+LK+LG+DDLL F F+D+PPQ GAL+ G+LT +
Sbjct: 793 VPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPM 852
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+M EFPLDP LSKM++ S + CS+E++TI ++LSV ++F+RPK ++ AD A+
Sbjct: 853 GRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEAD-AKKEK 910
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+Q DH+ LNVY W+ + YS +WC DN++ +++K R++R QL +++ + + L
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLI 970
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIY 597
S+ + ++K I S + + ARL+ G Y V+ +HP+S G+ +P +V+Y
Sbjct: 971 SNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPD-YVVY 1029
Query: 598 HELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKM 639
HEL++T KEYM+ VT + WL E+ P +Y +K+ + RK++
Sbjct: 1030 HELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKEL 1071
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1553 (551.7 bits), Expect = 2.0e-159, P = 2.0e-159
Identities = 312/643 (48%), Positives = 432/643 (67%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQPX 63
R+ LP+Y RE+ L+ ENQ++V VGETGSGKTTQIPQ++ E + + ++ CTQP
Sbjct: 72 RRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPR 131
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EM V LG EVGY+IRFEDC+ T+LKYMTDGM+LRE ++D L Y
Sbjct: 132 RVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRY 191
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHERTL+TDIL+G+ K L R DLK+++ SATLDA+KF YF AP+L VPG
Sbjct: 192 SCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPG 251
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R YPVEI+YT+ PE +Y++AA+ T L+IH + GDILVFLTG+
Sbjct: 252 RTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADD 311
Query: 244 LGTK--IGELIVCPVYANLPTELQAKIFVPTPDGA-----RKVVLATNIAETSLTIDGIK 296
L + G L V P+Y +LP Q +IF PTP+ RKVV++TNIAETSLTIDGI
Sbjct: 312 LVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIV 371
Query: 297 YVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDM 356
YVVD G+SK K YNP+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT ++++++
Sbjct: 372 YVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKEL 431
Query: 357 EDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE 416
+ T PEI R+NL++ +L LK LGIDDL++FD++D P L+ G+
Sbjct: 432 IEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGD 491
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNA 476
LT +GR+ +EFPLDP L+ M++ S +F CSNE++++ ALLSV N VF RP + + LAD
Sbjct: 492 LTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNSARKLADEM 550
Query: 477 RMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
R F D GDH+ LLNVY+++K + + WC+++F+ R++ A ++R QL +ER
Sbjct: 551 RQQFTHPD-GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQE 609
Query: 537 IELTSSLCNLEA----MKKAIISGFLLHTARLQKNG-SYWTVKHPQKVHVHPSSGLAQVP 591
+EL S+ + + +++A++SGF + A+ NG +Y T+K Q V +HPS GL+ P
Sbjct: 610 VELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGLSVTP 669
Query: 592 KRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED 634
+ WV+Y+E VLTTK ++R VT ++PEWL E+AP+YY L D ++
Sbjct: 670 E-WVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDN 711
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1540 (547.2 bits), Expect = 4.8e-158, P = 4.8e-158
Identities = 325/662 (49%), Positives = 442/662 (66%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQ 61
K R+ LP++ R++ L+ Q NQ++V VGETGSGKTTQIPQ++ E + ++ +V CTQ
Sbjct: 88 KIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQ 147
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM VKLG EVGYSIRFE+ TS KT+LKYMTDGM+LRE + D L
Sbjct: 148 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLS 207
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERTL+TDIL+G+ K +V+ R DLK++I SATLDAEKF YFN AP+L V
Sbjct: 208 RYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAV 267
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR- 240
PGR YPVE++YT + +Y+D+AI T L+IHAT+ +GDIL+FLTG+
Sbjct: 268 PGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEG 327
Query: 241 ---IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDG-----ARKVVLATNIAETSLTI 292
+R+ G G L V P+Y +LP Q +IF P P+ RKVV++TNIAETSLTI
Sbjct: 328 DQLVREEGC--GPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI 385
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DGI YVVD G+SK K YNP+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT ++
Sbjct: 386 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 445
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
Q+++ + + PEI R+NL++ +L LK LGIDDL++FDF+D P L+
Sbjct: 446 QKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLD 505
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G LT +GR ++FPLDPML+ M++ S +F+CS EI+TI A+LSV N VF RP K
Sbjct: 506 DEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDKKR 564
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKEND-YS---KQWCYDNFIQFRSMKHARDIRDQL 528
AD+A+ F D GDHI LLNVY+++K ++ Y +WC D+++ +RS+ A +IR QL
Sbjct: 565 ADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQL 623
Query: 529 TCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTARLQKNGS--YWTVKHPQKVHVH 582
L+ R +EL + S + ++KA+ SGF + A+ +++G+ Y TVK Q V +H
Sbjct: 624 ERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIH 682
Query: 583 PSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMP 640
PS+ L WVIY+E VLT+K Y+R VT ++PEWL EIAP YY L + + D++ +
Sbjct: 683 PSTVLGH-DAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLE 741
Query: 641 RV 642
R+
Sbjct: 742 RI 743
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1533 (544.7 bits), Expect = 2.6e-157, P = 2.6e-157
Identities = 311/650 (47%), Positives = 436/650 (67%)
Query: 1 MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGC 59
+L+K RK LP++ +E ++ ++ENQVV++VGETGSGKTTQIPQ++ +AG + GK VG
Sbjct: 70 ILEK-RKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGV 128
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP EM +LG EVGYSIRFE+ +S +T +KY+TDGM+LRE +SDP
Sbjct: 129 TQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPT 188
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L Y V+++DEAHERTLSTDIL G+ KD+++ R DLKL++ SATL+A KF YF AP++
Sbjct: 189 LNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLI 248
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXX 239
+VPGR +PVEI YT+ +Y+++A+ T ++IH + +GDILVFLTG+
Sbjct: 249 KVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQR 308
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVV 299
R+ G + + P+Y++LP Q+KIF + RK +++TNIAETSLTIDGI +VV
Sbjct: 309 ETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVV 364
Query: 300 DSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDN 359
D G+SK K YNP++ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT +++E M
Sbjct: 365 DPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQ 424
Query: 360 TVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTK 419
T PEI R+NLA+V+L L LG+ DL++FDF+D P GAL+ G+LT+
Sbjct: 425 THPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTE 484
Query: 420 VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
+G M+EFPLDP LSKM++ S + CSNEI+TIAA+LS N F RPK+ + AD+A+ +
Sbjct: 485 IGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPKDNRIEADSAKKS 543
Query: 480 FYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL 539
F D GDH+ +LNVY+S+K+N WCYDNF+ R++K A +R QL ++ R + L
Sbjct: 544 FDHFD-GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPL 602
Query: 540 TSSLCN----LEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV 595
S N E +KK I +GF + A+ +K Y+T+ Q V HPS+GL + P+ +
Sbjct: 603 VSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRRPE-FC 661
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVAGR 645
IY+E VLT++ Y+R +T++K +WL E+AP Y+ K K+ + A R
Sbjct: 662 IYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETIQRAQR 711
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1533 (544.7 bits), Expect = 2.6e-157, P = 2.6e-157
Identities = 301/633 (47%), Positives = 430/633 (67%)
Query: 3 QKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQP 62
+++R+ LP + REQ+L +++NQV+++VGETGSGKTTQ+ Q+L+E GY ++G +GCTQP
Sbjct: 486 REQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQP 545
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLES 122
EMGV+LG VGYSIRFED T TV+KYMTDG++LRE L LE
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 123 YSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVP 182
YSV+++DEAHER+L+TDIL+G+ K ++ R D+KLL++SAT++++KFS +F AP +P
Sbjct: 606 YSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIP 665
Query: 183 GRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIR 242
GR YPV+I + KAP S+Y++AA+ L+IH +Q +GDILVF+TGQ R+
Sbjct: 666 GRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLN 725
Query: 243 KLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
+L L + P+Y+ +P +LQAKIF G RKVV+ATNIAETSLT+ GI YVVD+G
Sbjct: 726 QLHDA-PRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTG 784
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVP 362
Y K+K YN K G+++L V PIS+A+A QRAGR+GRTGPG +RLYT +Y +M + T+P
Sbjct: 785 YCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLP 844
Query: 363 EIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGR 422
EIQRTNL+N +LILK+LG++++ +FDF+D PP GAL+ G+LT +G+
Sbjct: 845 EIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGK 904
Query: 423 QMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQ 482
+M+ FP+DP LSK+I+ ++ +KC+ EIITI ++LSV SVFYRPK + +D AR F
Sbjct: 905 KMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAEESDAAREKFNV 963
Query: 483 GDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS 542
++ DH+ LLN+Y W+ N YS WC +F+ +++K ARDIR QL ++ + I L S
Sbjct: 964 PES-DHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISL-ES 1021
Query: 543 LCNLEAMKKAIISGFLLHTARLQKN-GSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYH 598
+ + + +++ + S + H A K G Y ++ H+H +S GL +P +VIYH
Sbjct: 1022 VSDWDIVRRVLCSAYF-HQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPD-YVIYH 1079
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
ELVLT+KEYM VT + P WL E YY +K+
Sbjct: 1080 ELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
Identities = 311/644 (48%), Positives = 428/644 (66%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQY--LHEAGYTKHGKVGCTQ 61
K R+ LP++ R++ L+ Q++Q++V VGETGSGKTTQIPQ+ L + T+ + CTQ
Sbjct: 94 KTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQ 153
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+ V LG EVGYSIRFED TS KT+LKYMTDGM+LRE ++D +L
Sbjct: 154 PRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELS 213
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERT+STD+L+G+ K++V+ R DLK++I SATLDA+KF YFN AP+L V
Sbjct: 214 RYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAV 273
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVEI YT PE +Y++AAI T L+IHAT+ GDIL+FLTG+
Sbjct: 274 PGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEG 333
Query: 242 RKL--GTKIGELIVCPVYANLPTELQAKIFVPTPD----GAR---KVVLATNIAETSLTI 292
++ G L V +Y +LP +Q +IF P P G R KV+++TNIAETSLTI
Sbjct: 334 DEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTI 393
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DGI YVVD G+SK K YNP+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT +++
Sbjct: 394 DGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAF 453
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
++++ D T PEI R+NL++ +L LK LGIDDL++FD +D P L+
Sbjct: 454 KKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLD 513
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G LT +GR +EFPLDP L+ M+++S +F CSNEI++I ALLSV +F RP +++
Sbjct: 514 DDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQ-IFVRPASQRKR 572
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLT 529
AD + F D GDH+ LLN Y+++K + KQWC+D+F+ RS++ A ++R QL
Sbjct: 573 ADEMKNLFAHPD-GDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLL 631
Query: 530 CLVERVGIELTSSLCN----LEAMKKAIISGFLLHTARLQKNGS--YWTVKHPQKVHVHP 583
++ER +E+ S+ E +++A+ +GF + A+ + G Y T+K Q V +HP
Sbjct: 632 RIMEREELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHP 691
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
S+ LA WV+Y+E VLTTK Y+R VT +KPEWL +IAP YY
Sbjct: 692 STVLAH-DAEWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYY 734
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1502 (533.8 bits), Expect = 5.1e-154, P = 5.1e-154
Identities = 317/666 (47%), Positives = 437/666 (65%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQ 61
K R+ LP++ RE+ L+ Q++V VGETGSGKTTQIPQ++ E + +V CTQ
Sbjct: 89 KTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQ 148
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM V+LG EVGY+IRFE+ + KT+LKYMTDGM+LRE + D L
Sbjct: 149 PRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLT 208
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERTL+TDIL+G+ K + R DLK++I SATLDAEKF YFN AP+L V
Sbjct: 209 RYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAV 268
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVEI+YT + +Y+DAAI T L+IHAT+ GDIL+FLTG+
Sbjct: 269 PGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEG 328
Query: 242 RKLGTK--IGELIVCPVYANLPTELQAKIFVPTP-----DG--ARKVVLATNIAETSLTI 292
+L + G L V P+Y +LP Q KIF P P +G RKV+++TNIAETSLTI
Sbjct: 329 DELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTI 388
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DGI YVVD G+SK K YNP+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT ++
Sbjct: 389 DGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 448
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
++++ + + PEI R+NL++ +L LK LGIDDL++FDF+D P L+
Sbjct: 449 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCLS 508
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT +GR ++FPLDPML+ M++ S + CS EI+TI A+LSV N VF RP + +
Sbjct: 509 DEGDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPN-VFVRPASARKR 567
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSK----QWCYDNFIQFRSMKHARDIRDQL 528
AD A+++F Q D GDH+ L+NVY ++ + S+ +WC DNF+ +RS+ A+++R+QL
Sbjct: 568 ADEAKLSFAQAD-GDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQL 626
Query: 529 TCLVERVGIELTSSLCNL------EAMKKAIISGFLLHTARLQK-NGSYWTVKHPQKVHV 581
L+++ ++L S + E +KKA+++GF + A+ + N Y TVK Q V +
Sbjct: 627 QRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQVAKKKSGNKGYLTVKDNQDVLI 686
Query: 582 HPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKM 639
HPS+ L++ + W+IY+E VLT+K Y+R VT +KPEWL EIAP YY L D++ +
Sbjct: 687 HPSTVLSKEGE-WLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYYNLDHFAKGDVKLSL 745
Query: 640 PRVAGR 645
RV R
Sbjct: 746 ERVVER 751
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 288/643 (44%), Positives = 422/643 (65%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 586
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 646
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+++F PI +PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 706
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQ + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 766
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 767 L-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 825
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +P G L + I K G SG T P +C RLYT ++Y+ ++ TVPE
Sbjct: 826 CKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTVPE 884
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP+ GAL+ G LT GR
Sbjct: 885 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 944
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 945 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVP 1003
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH++ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1004 ES-DHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1062
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1063 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1121
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1122 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRA 1164
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 305/655 (46%), Positives = 422/655 (64%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQ 61
K R+ LP++ +R++ L + Q++V VGETGSGKTTQIPQY+ E + V CTQ
Sbjct: 102 KTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQ 161
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+ V+LG EVGYSIRFE+ T+ T+LKYMTDG +LRE + DP +
Sbjct: 162 PRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPNMT 221
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERTL+TDIL+ + K L RSDLK++I SATLDA KF YF APIL V
Sbjct: 222 RYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAV 281
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
PGR +PVEI YT E +YI+A++ T L+IHAT+A GDIL+FLTG+ +
Sbjct: 282 PGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEV 341
Query: 242 RKL--GTKIGELIVCPVYANLPTELQAKIF--VPTP--DGAR---KVVLATNIAETSLTI 292
+L G + V P+Y LP + Q KIF P P G R K ++ATNIAETSLTI
Sbjct: 342 DELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTI 401
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DGI YVVD G+SK K YN + +ESLLV PIS+ASA QRAGR+GRT PGKCFRLYT ++
Sbjct: 402 DGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAF 461
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
++++ + T PEI R+NL+N IL LK LG+DDL++FDF+D P LN
Sbjct: 462 KKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRALEELNYLSCLN 521
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT +G +E+PLDP L+ M+V+S +F CSNE++++ +LLSV VF RP N +
Sbjct: 522 DDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQ-VFMRPANNRKR 580
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWK----ENDYSKQWCYDNFIQFRSMKHARDIRDQL 528
AD + +F + GDH+ LLN Y+++K + K+WC+++F+ +R + A ++R QL
Sbjct: 581 ADEMKEHFKHME-GDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQL 639
Query: 529 TCLVERVGIELTSSLCN----LEAMKKAIISGFLLHTARLQKNGS-YWTVKHPQKVHVHP 583
++ER +EL S+ +++ +++GF + A + +G Y T+K Q V +HP
Sbjct: 640 KGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRETSGKVYHTIKDNQNVMLHP 699
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
SS L WV+YHE VLT+K+Y+R VT ++PEWL +IAP+YY L + ED + K
Sbjct: 700 SSVLT-TDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYYDLDNFEDDQAK 753
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 299/651 (45%), Positives = 430/651 (66%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-HGK-VGC 59
++ ++ LP++ R Q+L ++ENQVVVI+GETGSGKTTQ+ QYL+E GY GK +
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCT-SEKTVLKYMTDGMVLREMLSDP 118
TQP EM V LG EVGYSIRFED T SE T LK++TDG++LRE L D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L+ YS +++DEAHER+L+TDILLG FK L+ R DLKL+I+SAT++A+KFSA+F AP
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQ--ASGDILVFLTGQXXXXXXXXX 236
+PGR +PV+ YT P +Y++AA+ ++IH +SGDIL+F+TGQ
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 237 XXXRI-----RKLGT----KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAE 287
+ +K GT +I ++ + P+Y+ LP +LQ KIF RK+++ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 288 TSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLY 347
TSLTI GI+YV+D GYSK+K YNPK G++SL++ PISKA+A QR+GR+GRT PG +RLY
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 348 TINSYQEDMEDNTVPEIQRTNLANVILILKNLGI-DDLLNFDFLDSPPQXXXXXXXXXXX 406
T ++++EDM T+PEIQRTNL+N +L+LK+L + D+L F F+D PP
Sbjct: 703 TEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELW 762
Query: 407 XXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP 466
GA++ G+LT +G QMA+FPL P LSK+++ + + CS+E++TI ++LSV VFYRP
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQ-VFYRP 821
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRD 526
K ++ AD AR F+ + DH+ LLNV+ W+ N++S WC +F+Q++S+ ARDIRD
Sbjct: 822 KERQKEADIARNKFFIAKS-DHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRD 880
Query: 527 QLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS- 585
QL +++ I + SS + + +KK I SGF A++ +Y +K V +HP+S
Sbjct: 881 QLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSA 940
Query: 586 --GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED 634
GL +P +V+YHEL++T+KEY+ VT + P WL E Y +K +++
Sbjct: 941 LHGLGDLPP-YVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRIKN 990
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
Identities = 295/658 (44%), Positives = 422/658 (64%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++K+R+ LP++ +R +L V+ Q VVIVGETGSGK+TQIPQYL EAG+ GKV G T
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVT 96
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTS-EKTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY+IRF+DC+ T +K++TDGM++REM+SDP
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL 156
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF---- 175
L+ YSVL++DEAHERTL TDI +G+ K +++ R DL+L+++SATLDA+KF +FN
Sbjct: 157 LKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESG 216
Query: 176 ------APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
IL V GR +PV+I YT +P +Y+ A + T L+IH T+ GD+L FLTGQ
Sbjct: 217 DASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEE 276
Query: 230 XXXXXXXXXXRIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R L ++ G L V P+YA LP Q ++F RKVV+ATNIA
Sbjct: 277 VEKVVSLLQEQARTL-SRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIA 335
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI+G+ +V+D + K++ YNP+T +ESL+V PISKASA QRAGR+GR GKCFRL
Sbjct: 336 ETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRL 395
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT + E + ++TVPE+QR+NLA VIL LK LGID++L F FL PP
Sbjct: 396 YTEEDF-EKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLF 454
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L+Q G LT +G +MAEFPL PM +KM++ S F CS EI+TIAA++ + N +F
Sbjct: 455 ALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQN-IFVA 513
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N++ A F + GDH+ +LNVY ++ ++ S QWC D+F+ ++ + A +R
Sbjct: 514 PHNQRKSAAREHRKFAVAE-GDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVR 572
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + TSS + + + + I+SGF + AR+ +GSY T++ +++++HP S
Sbjct: 573 EQLRHLLNKFKVPRTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDS 632
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
L + P +WV+++E+V T+K YMR VT ++ WL E+APH+Y L K +V
Sbjct: 633 VLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLSSKRAKV 690
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1345 (478.5 bits), Expect = 2.0e-147, Sum P(2) = 2.0e-147
Identities = 284/605 (46%), Positives = 385/605 (63%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK--VGC 59
+Q+ RK LP++ Y++++L+ +++NQV++I+GETGSGKTTQ+PQYL E G+T GK +
Sbjct: 216 IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAI 275
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTS-EKTVLKYMTDGMVLREMLSDP 118
TQP EM V LG EVGY IRFED T+ KTVLKYMTDGM+LRE L+D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
KL YS +M+DEAHERTL+TDIL+G+ KD++ R LKLLISSAT++A+KFS +F+ PI
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPI 395
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQXXXXXXXXXX 237
VPGRRYPV+IHYT PE+NYI AAI T +IH TQ+ GDILVFLTGQ
Sbjct: 396 FNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKL 455
Query: 238 XXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKY 297
+ KLG++ ++I+ P+YANLP E Q KIF PTP+ RKVVLATNIAETSLTIDGI+Y
Sbjct: 456 EEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRY 515
Query: 298 VVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDME 357
V+D G+ K Y P TGM LL P S+AS QRAGR+GR GPGKCFR++T SY ++E
Sbjct: 516 VIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELE 575
Query: 358 DNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGEL 417
PEI RTNL+N +L+L +LG+ DL+ F +D P GALN G +
Sbjct: 576 LMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTI 635
Query: 418 TKVGRQMAEFPLDPMLSKMI-VASDKFKCSN---EIITIAALLSVGNSVFYRPKNKKFLA 473
T++G+ M EFP +P +K++ A+ +C E +TI ++L S+F K
Sbjct: 636 TRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQKR----- 690
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
D A + ++ DHI L ++N W+ + +S+ WC D+ IQF++M R+IR+QL E
Sbjct: 691 DAAASVLSEVES-DHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSE 749
Query: 534 RVGI-----ELTSSLCNLEA-----MKKAIISGFLLHTARLQKNGSYWTVKHPQ---KVH 580
+VG+ + + N+ + + ISGF ++ +L G Y T+ V
Sbjct: 750 KVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVS 808
Query: 581 VHPSS 585
VHP+S
Sbjct: 809 VHPTS 813
Score = 116 (45.9 bits), Expect = 2.0e-147, Sum P(2) = 2.0e-147
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 551 KAIISGFLLHTARLQKNGSYWTVKHPQ---KVHVHPSSGL-------AQVPKRWVIYHEL 600
+ ISGF ++ +L G Y T+ V VHP+S L AQ P ++V+Y +L
Sbjct: 777 RCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQL 835
Query: 601 VLTTKEYMRQVTEL-KPEWLFEIAPHYYMLKDVED 634
+LT+KE++R + K EWL ++ P + KD+ D
Sbjct: 836 MLTSKEFIRDCLVIPKEEWLIDMVPQIF--KDLID 868
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 290/643 (45%), Positives = 425/643 (66%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQKE +LP++ ++ +L+ +E+ V+I+ ETG+GKTTQIPQYL+E GY +G + TQ
Sbjct: 68 LQKE--SLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQ 125
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EMGV+LG +VGY +RF+D T+EKT LKYMTDGM++RE + D L
Sbjct: 126 PRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLS 185
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLR---SDLKLLISSATLDAEKFSAYFNFAPI 178
YSV+++DEAHERTL+TD+L G+ K + + R + LK++I SATLDAE FS YFN AP+
Sbjct: 186 KYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPV 245
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA---TQAS---------GDILVFLTG 226
L + GR++PV+I+YT+ + +Y+DAA++T L+IH T S GDILVFLTG
Sbjct: 246 LYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTG 305
Query: 227 QXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ RI +L +LIVCP+++ LP E Q K+F P G+RKV+LATNIA
Sbjct: 306 RDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIA 365
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETSLTI+GI+YVVDSG K K +NPK G++SL + PISKASA QR GR+GR GKC+RL
Sbjct: 366 ETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRL 425
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ E ++ +++PEI+R+N+ANVIL LK +GI+D+L+FDFL+SPP
Sbjct: 426 YTQETF-EKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLF 484
Query: 407 XXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP 466
A++ G LT++G++MA FPLDPM SK ++ S +F+CS E++ I ++LSV S+F+ P
Sbjct: 485 CLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSV-ESIFFTP 543
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEN--DYSKQWCYDNFIQFRSMKHARDI 524
K KK ++ + F+ D GDHI LNV+ ++++ +QWC+D+FI +SM ++
Sbjct: 544 KEKKKEVEDVKKIFFSPD-GDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNV 602
Query: 525 RDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPS 584
+QL + + + S + + +KK+ I GF L+TA LQ + Y T+ +++ +HP+
Sbjct: 603 FEQLVKYCISLKLPIVSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPT 662
Query: 585 SGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
S L + ++Y+EL +TTK + R + ++ WL EI P YY
Sbjct: 663 SFLFDQKPQHILYNELTITTKAFARNIIPIEGSWLAEICPKYY 705
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
Identities = 291/658 (44%), Positives = 416/658 (63%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L V+ Q VVIVGETG GK+TQ+PQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----F 175
L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDAEKF +FN
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETS 226
Query: 176 AP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI A + T ++IH T+ GDIL FLTGQ
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKL---GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R L G K L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ E + +TVPE+QR+NLA V+L LK LGID +L F F+ PP
Sbjct: 406 YTEEAF-EQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N VF
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVF 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LNVY ++ +++ S QWC ++F+ ++ + A +R
Sbjct: 524 PSNQKSQATRVHRKFAV-EEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
DQL L+ + + SS + + + + I+SGF + AR G+Y T++ ++H+HP+S
Sbjct: 583 DQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K +V
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKV 700
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1408 (500.7 bits), Expect = 4.6e-144, P = 4.6e-144
Identities = 287/658 (43%), Positives = 420/658 (63%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L ++ Q VVI+GETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT+ T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFA--- 176
L YS +M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDAEKF +FN
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTS 226
Query: 177 -P------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI + + T ++IH T+ GDIL FLTGQ
Sbjct: 227 DPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R LG + G L + P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALG-QTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ + + +TVPE+QR+NLA VIL LK LGID++L F F+ PP
Sbjct: 406 YTEEAFDQ-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N VF
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A A F + GDH+ +LNVY ++ +++ + QWC ++F+ ++ + A +R
Sbjct: 524 PSNQKSQAIRAHRKFAV-EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + SS + + + + I+SGF + AR G+Y T++ ++H+HP+S
Sbjct: 583 EQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+Y LR K +V
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLRAKRAKV 700
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 837 (299.7 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 162/382 (42%), Positives = 247/382 (64%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
+ P+Y+ L +E Q+KIF RK++++TNIAETSLT+DGIKYV+D+GY K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
GM+ L V PIS+A+A QR+GR+GRTG G C+RLYT N++ D+ N +PEIQR+NL+NV
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 373 ILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPM 432
+L+LK+L + +L FDF+D P + GA+N G LT +GR+M +FPLDP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 433 LSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALL 492
LSK+++ S F+C+ EI+ I ++LS S+F K ++ + F ++ DH+ LL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPES-DHLTLL 1009
Query: 493 NVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
N+Y W+ ++YS WC NFIQ++++ A+++ QL +++ + I+ S E ++K
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKT 1069
Query: 553 IISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQV--PKRWVIYHELVLTTKEYMRQ 610
I SG+ + A+L+ Y ++ HVHP+S L + +VIY E+V TTKEYMR
Sbjct: 1070 ICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRN 1129
Query: 611 VTELKPEWLFEIAPHYYMLKDV 632
VT + PEWL E+ P ++ +K+V
Sbjct: 1130 VTTVDPEWLCELGPLFFYMKNV 1151
Score = 587 (211.7 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 111/231 (48%), Positives = 165/231 (71%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L K +++LPIY + ++L AV N +++IVGETGSGKTTQI QYL+E GY ++G + CTQ
Sbjct: 472 LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQ 531
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM V +G VGY+IRFED T++ T ++Y+TDG++LRE L+D +L+
Sbjct: 532 PRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELD 591
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+++DEAHER+++TD+LLGI K++ R+DLKL+++SAT+DA+KFSA+F API +
Sbjct: 592 KYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNI 651
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQAS-----GDILVFLTGQ 227
GR + V I Y + P ++YI+ A+ ++IH + + GDIL+F+TGQ
Sbjct: 652 QGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQ 702
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 837 (299.7 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 162/382 (42%), Positives = 247/382 (64%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
+ P+Y+ L +E Q+KIF RK++++TNIAETSLT+DGIKYV+D+GY K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
GM+ L V PIS+A+A QR+GR+GRTG G C+RLYT N++ D+ N +PEIQR+NL+NV
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 373 ILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPM 432
+L+LK+L + +L FDF+D P + GA+N G LT +GR+M +FPLDP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 433 LSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALL 492
LSK+++ S F+C+ EI+ I ++LS S+F K ++ + F ++ DH+ LL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPES-DHLTLL 1009
Query: 493 NVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
N+Y W+ ++YS WC NFIQ++++ A+++ QL +++ + I+ S E ++K
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKT 1069
Query: 553 IISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQV--PKRWVIYHELVLTTKEYMRQ 610
I SG+ + A+L+ Y ++ HVHP+S L + +VIY E+V TTKEYMR
Sbjct: 1070 ICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRN 1129
Query: 611 VTELKPEWLFEIAPHYYMLKDV 632
VT + PEWL E+ P ++ +K+V
Sbjct: 1130 VTTVDPEWLCELGPLFFYMKNV 1151
Score = 587 (211.7 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 111/231 (48%), Positives = 165/231 (71%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L K +++LPIY + ++L AV N +++IVGETGSGKTTQI QYL+E GY ++G + CTQ
Sbjct: 472 LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQ 531
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM V +G VGY+IRFED T++ T ++Y+TDG++LRE L+D +L+
Sbjct: 532 PRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELD 591
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+++DEAHER+++TD+LLGI K++ R+DLKL+++SAT+DA+KFSA+F API +
Sbjct: 592 KYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNI 651
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQAS-----GDILVFLTGQ 227
GR + V I Y + P ++YI+ A+ ++IH + + GDIL+F+TGQ
Sbjct: 652 QGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQ 702
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1397 (496.8 bits), Expect = 6.8e-143, P = 6.8e-143
Identities = 283/643 (44%), Positives = 414/643 (64%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L ++ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF---- 175
L YS +M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDAEKF +FN
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTS 226
Query: 176 -AP-----ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI + + T ++IH T+ GDIL FLTGQ
Sbjct: 227 DPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R LG + G L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR+GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT +++ + + +TVPE+QR+NLA VIL LK LGID++L F F+ PP
Sbjct: 406 YTEDAFDQ-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LNVY ++ +++ + QWC ++F+ ++ + A +R
Sbjct: 524 PSNQKSQAIRVHRKFAV-EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + SS + + + + I+SGF + AR G Y T++ ++H+HP+S
Sbjct: 583 EQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPAS 642
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+Y
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1396 (496.5 bits), Expect = 8.6e-143, P = 8.6e-143
Identities = 289/659 (43%), Positives = 413/659 (62%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L V+ Q +VIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTS-EKTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT + T +K++TDGM++REM++DP
Sbjct: 107 QPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----- 174
L YSVLM+DEAHERTL TDI +G+ K + + R DL+L+++SATLDAEKF +FN
Sbjct: 167 LTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTG 226
Query: 175 -----FAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
+ IL V GR +PV+I Y ++P +YI + + T ++IH + GDIL FLTGQ
Sbjct: 227 DPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R L ++ G L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARAL-SRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNPKT +E L+V P+SKASA QRAGR+GR GKC+RL
Sbjct: 346 ETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRL 405
Query: 347 YTINSYQ-EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXX 405
YT E + +TVPE+QR+NLA VIL LK LGID++L F FL PP
Sbjct: 406 YTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELL 465
Query: 406 XXXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFY 464
G L+ LT+ +G ++AEFPL+PM +KM++ S F CS EI+TIAA++ + N +F
Sbjct: 466 YALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQN-IFL 524
Query: 465 RPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDI 524
P N+K A F + GDH+ +LNVY ++ ++ S QWC ++F+ ++ + A +
Sbjct: 525 IPPNQKSQAARQHRKFAV-EEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVV 583
Query: 525 RDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPS 584
R+QL L+ + SS + + + + I+SGF + A+ G+Y T++ ++H+HP+
Sbjct: 584 REQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPT 643
Query: 585 SGL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
S L A+ P RWV+Y+E++ T K YMR VT ++ WL E+APH+Y L K +V
Sbjct: 644 SVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFYQQGTHLSLNAKRAKV 702
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
Identities = 283/658 (43%), Positives = 418/658 (63%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L ++ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT + T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----F 175
L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDA+KF +FN
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 176 AP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI + + T ++IH T+ GD+L FLTGQ
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKL---GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R L G K L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ + + +TVPE+QR+NLA VIL LK LGID++L F F+ PP
Sbjct: 406 YTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LN+Y ++ +++ +WC ++F+ ++ + A +R
Sbjct: 524 PPNQKSHAIRVHRKFAV-EEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + SS + + + + I+SGF + AR G+Y T++ ++H+HP+S
Sbjct: 583 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K +V
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKV 700
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 713 (256.0 bits), Expect = 1.2e-141, Sum P(2) = 1.2e-141
Identities = 147/365 (40%), Positives = 229/365 (62%)
Query: 277 RKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSG 336
RK++L+TNI ETS+TID I YV+DSG K K YNP +G+ESL+ P SKAS QR GR+G
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 337 RTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQX 396
R GKCFRL+T S+ D+ DN++PEIQR ++++IL+LK+LG+DD++NFDFLD P
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 397 XXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIV-ASDKFKCSNEIITIAAL 455
GALN G LT+ GR+MAEFP D SKMI+ A++K+ C +EI+ +A++
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 456 LSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQF 515
L+ N++FY K K+ A+N + F GD + LN+Y +EN++S +CYD+F+Q+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 516 RSMKHARDIRDQLTCLVERVGIELTS-SLCNLEAM---KKAIISGFLLHTARLQKNGSYW 571
++ +D++ QL + E++ I +T+ + N E++ KK+I+S F + A
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELK 1101
Query: 572 TVKHPQKVHVHPSSGLAQ--VPKR----WVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+K Q V ++P+S L + + + +I++E++ K Y+R + LF+IA
Sbjct: 1102 IIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADF 1161
Query: 626 YYMLK 630
Y++ K
Sbjct: 1162 YFLNK 1166
Score = 708 (254.3 bits), Expect = 1.2e-141, Sum P(2) = 1.2e-141
Identities = 136/265 (51%), Positives = 181/265 (68%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXX 64
ERK LPIY YR +L+A++ N+++++VGETGSGK+TQ+ QYL+E Y +G + CTQP
Sbjct: 434 ERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRR 493
Query: 65 XXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYS 124
EM VK+G EVGY IRF++ TSE T + YMTDGM LR +L +P LE S
Sbjct: 494 IACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDIS 553
Query: 125 VLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGR 184
VL++DEAHER L TD++L I KD+ R +++++ISSATLDAEK S YFN API VPGR
Sbjct: 554 VLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGR 613
Query: 185 RYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKL 244
+Y V+I+YT ESNYI A ++T L+IH TQ GDILVFL GQ ++ +L
Sbjct: 614 KYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNEL 673
Query: 245 GTKIGELIVCPVYANLPTELQAKIF 269
K L++ P+Y++LP E QA+IF
Sbjct: 674 APKYRNLVILPIYSSLPVEYQARIF 698
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 713 (256.0 bits), Expect = 1.2e-141, Sum P(2) = 1.2e-141
Identities = 147/365 (40%), Positives = 229/365 (62%)
Query: 277 RKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSG 336
RK++L+TNI ETS+TID I YV+DSG K K YNP +G+ESL+ P SKAS QR GR+G
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 337 RTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQX 396
R GKCFRL+T S+ D+ DN++PEIQR ++++IL+LK+LG+DD++NFDFLD P
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 397 XXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIV-ASDKFKCSNEIITIAAL 455
GALN G LT+ GR+MAEFP D SKMI+ A++K+ C +EI+ +A++
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 456 LSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQF 515
L+ N++FY K K+ A+N + F GD + LN+Y +EN++S +CYD+F+Q+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 516 RSMKHARDIRDQLTCLVERVGIELTS-SLCNLEAM---KKAIISGFLLHTARLQKNGSYW 571
++ +D++ QL + E++ I +T+ + N E++ KK+I+S F + A
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELK 1101
Query: 572 TVKHPQKVHVHPSSGLAQ--VPKR----WVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+K Q V ++P+S L + + + +I++E++ K Y+R + LF+IA
Sbjct: 1102 IIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADF 1161
Query: 626 YYMLK 630
Y++ K
Sbjct: 1162 YFLNK 1166
Score = 708 (254.3 bits), Expect = 1.2e-141, Sum P(2) = 1.2e-141
Identities = 136/265 (51%), Positives = 181/265 (68%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXX 64
ERK LPIY YR +L+A++ N+++++VGETGSGK+TQ+ QYL+E Y +G + CTQP
Sbjct: 434 ERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRR 493
Query: 65 XXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYS 124
EM VK+G EVGY IRF++ TSE T + YMTDGM LR +L +P LE S
Sbjct: 494 IACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDIS 553
Query: 125 VLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGR 184
VL++DEAHER L TD++L I KD+ R +++++ISSATLDAEK S YFN API VPGR
Sbjct: 554 VLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGR 613
Query: 185 RYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKL 244
+Y V+I+YT ESNYI A ++T L+IH TQ GDILVFL GQ ++ +L
Sbjct: 614 KYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNEL 673
Query: 245 GTKIGELIVCPVYANLPTELQAKIF 269
K L++ P+Y++LP E QA+IF
Sbjct: 674 APKYRNLVILPIYSSLPVEYQARIF 698
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 988 (352.9 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 209/501 (41%), Positives = 309/501 (61%)
Query: 143 GIFKDLV-RLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNYI 201
G+ K R S LKL+I SA+LDA FS YF A + V GR++PV+I YT PES+Y+
Sbjct: 216 GVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYV 275
Query: 202 DAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLP 261
DA +VT +IH + GDILVFLTGQ R++ + +L+ +++ LP
Sbjct: 276 DATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALP 335
Query: 262 TELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVY 321
+E Q K+F P P G RKV+LATNIAETS+TI GI+YV+D G+ K + Y+P GMESL V
Sbjct: 336 SEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVV 395
Query: 322 PISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGI 381
P SKA +QR+GR+GR GPGK FRLY + E +ED+T PEI+R NL+N+IL LK LGI
Sbjct: 396 PASKAQTLQRSGRAGREGPGKSFRLYPEREF-EKLEDSTKPEIKRCNLSNIILQLKALGI 454
Query: 382 DDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVAS 440
DD++ FDF+D P + GAL G+L VG QM+ PL+P+ SK ++ +
Sbjct: 455 DDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILA 514
Query: 441 DKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKE 500
++F C E++ A+LSV S+FY P+ K+ A ++ N + GDH+ L+VY E
Sbjct: 515 NQFNCLEEMLITVAVLSV-ESIFYDPREKREEARTSK-NHFASVEGDHLTYLSVYRESDE 572
Query: 501 -----------NDYSK---QWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNL 546
N+ K +WC +N++ RS+KHARDI Q+ VE++G ++S ++
Sbjct: 573 FLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDM 632
Query: 547 EAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKE 606
A ++ + + F L A+ Q +G+Y ++ + VH+HP+S L + VI++EL+ T+K+
Sbjct: 633 LAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKK 692
Query: 607 YMRQVTELKPEWLFEIAPHYY 627
Y++ +T + WL E+APH++
Sbjct: 693 YIKNLTIIDSLWLSELAPHHF 713
Score = 397 (144.8 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 76/153 (49%), Positives = 107/153 (69%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+ + R++LPI ++++ VQ+N +++IVGETGSGKTTQ+PQ+L+ AG+ + GK +G T
Sbjct: 34 IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGIT 93
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E V+LG +VGYSIRF+D TS T LKYMTDG++LRE L DP L
Sbjct: 94 QPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHL 153
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRS 153
YSV++VDEAH+R++ TD+LL + K + R RS
Sbjct: 154 SRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRS 186
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
Identities = 270/628 (42%), Positives = 402/628 (64%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++RK LPI+ + + + +Q+N+V+V+VGETGSGK+TQIPQ+L+E Y + G V TQP
Sbjct: 91 EQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPR 150
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G +LG +VGYSIRF+D TS+KT +KY+TDGM+LRE+++DP L Y
Sbjct: 151 RVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQY 210
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
L++DEAHERTL TD+LLG K +++ R L+++I SATL+AE+FS +F+ A I + G
Sbjct: 211 HTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISG 270
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R+YPV+IHYT PE +Y+DA + T ++H GDILVFLTGQ ++
Sbjct: 271 RQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQ 330
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L + + ++ CP++A+LP E Q ++F+P RKVVL+TNIAETS+TI GI+YV+D+G
Sbjct: 331 LPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGL 390
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
+K+K +N K G+ESL V PIS+++AMQR+GR+GR G+C+R+YT + + + T+PE
Sbjct: 391 AKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPE 449
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
I+R +L+ +L LK G +D++NF ++D P + GAL+ G + +G Q
Sbjct: 450 IKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQ 509
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M+ PL P L++ ++A+ + C +E+I + + LS +S+F P+ K+ A AR+ F
Sbjct: 510 MSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLST-DSMFLFPQEKRDEAIEARLKFLHS 568
Query: 484 DAGDHIALLNVYNSWKEN--DYSKQWCYDNFIQFRSMKHARDIRDQLT--CLVERVGIEL 539
+ GD + LN + E+ D KQWC NFI R++K DIR QL CL + G EL
Sbjct: 569 E-GDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKD--GWEL 625
Query: 540 TSSL-CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYH 598
SS N E + + +SG++ +TA L +GSY T+ Q + +HPSS L ++YH
Sbjct: 626 NSSPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYH 685
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHY 626
ELV TTK Y+R V+ ++ WL +APHY
Sbjct: 686 ELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 281/659 (42%), Positives = 411/659 (62%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
L K LPI +++ +L V+ V ++VG+TGSGKTTQ+PQYL +AG+ GK + T
Sbjct: 15 LYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVT 74
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EM KLG +VGYSIRFED TS T +K++TDGM+LRE L DP L
Sbjct: 75 QPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLL 134
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF------- 173
YSV+MVDEAHER+LSTDILLGI K +++ R +L++++SSATL AE F YF
Sbjct: 135 SRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQ 194
Query: 174 --------NFAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLT 225
N I+ + GR YPV+ + ++ NY++ ++ T +IH + GDIL+FLT
Sbjct: 195 GPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLT 254
Query: 226 GQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNI 285
G+ R L K L+ P+YA L T+ Q +F P P+ RKVV++TNI
Sbjct: 255 GREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNI 314
Query: 286 AETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFR 345
AE S+TI+GI YVVD G++K++ Y+P TG+E+L PISKA+A+QRAGR+GRT PGKCFR
Sbjct: 315 AEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFR 374
Query: 346 LYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXX 405
LYT ++Y E + D T+PEIQR+NLA VI+ LK LGID+++ FDFL SPP
Sbjct: 375 LYTQHAY-EQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELL 433
Query: 406 XXXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFY 464
GA++ +LTK +G +MAE +DPM++K+++++ F C +EI+TIAA++S+ +V+
Sbjct: 434 YSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWV 493
Query: 465 RPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW--KENDYSKQWCYDNFIQFRSMKHAR 522
+ K ++++R F + GDH+ LNVY ++ K SK WC DN + +RS+ A
Sbjct: 494 QHDGDKKSSESSRRKFAV-EEGDHLTYLNVYQAFVTKGKKESK-WCRDNLLNYRSLLRAV 551
Query: 523 DIRDQLTCLVERVGIELT---------SSLCN-LEAMKKAIISGFLLHTARLQKNGSYWT 572
+R QL +ER GI++ S L E +++ + +G+ H AR+Q +G++ T
Sbjct: 552 SVRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDGTFKT 611
Query: 573 VKHPQKVHVHPSSGLAQVPKRWVIYHELVLT-TKEYMRQVTELKPEWLFEIAPHYYMLK 630
V +H HPSS + WVI+HE++ T K ++R +T+++ +L E AP+YY ++
Sbjct: 612 VSGGMTLHAHPSSLMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYYNMQ 670
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1244 (443.0 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 260/585 (44%), Positives = 368/585 (62%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L V+ Q VVIVGETG GK+TQ+PQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----F 175
L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDAEKF +FN
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETS 226
Query: 176 AP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI A + T ++IH T+ GDIL FLTGQ
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKL---GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R L G K L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ E + +TVPE+QR+NLA V+L LK LGID +L F F+ PP
Sbjct: 406 YTEEAF-EQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N VF
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVF 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LNVY ++ +++ S QWC ++F+ ++ + A +R
Sbjct: 524 PSNQKSQATRVHRKFAV-EEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSY 570
DQL L+ + + SS + + + + I+SGF + AR G+Y
Sbjct: 583 DQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAY 627
Score = 112 (44.5 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 595 VIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
VIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K +V
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKV 676
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 280/657 (42%), Positives = 410/657 (62%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L V+ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----F 175
L YS +M+DEAHERTL TDI +G+ K + R R DL+LL++SATLDAEKF +FN
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETS 226
Query: 176 AP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI + + T ++IH T+ GDIL FLTGQ
Sbjct: 227 DPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R LG + G L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR+GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ + + TVPE+QR+NLA VIL LK LGID++L F F+ PP
Sbjct: 406 YTEEAFDK-LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LNVY ++ +++ + QWC ++F+ ++ + A +R
Sbjct: 524 PGNQKSQAIRVHRKFAV-EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + SS + + + + I+SGF + AR G+Y + P ++++ +
Sbjct: 583 EQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYYLT 642
Query: 586 GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
+ + VIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K +V
Sbjct: 643 LFNRKFLQKVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKV 699
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
Identities = 285/663 (42%), Positives = 412/663 (62%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L V+ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 39 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 98
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT T +K++TDGM++REM+ DP
Sbjct: 99 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 158
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----F 175
L YS +M+DEAHERTL TDI +G+ K + R R DL+LL++SATLDAEKF +FN
Sbjct: 159 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETS 218
Query: 176 AP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI + + T ++IH T+ GDIL FLTGQ
Sbjct: 219 DPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 278
Query: 230 XXXXXXXXXXRIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R LG + G L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 279 VETVVSMLIEQARALG-RTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 337
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR+GR+ GKC+RL
Sbjct: 338 ETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRL 397
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ + + TVPE+QR+NLA VIL LK LGID++L F F+ PP
Sbjct: 398 YTEEAFDK-LPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 456
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 457 ALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 515
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LNVY ++ +++ + QWC ++F+ ++ + A +R
Sbjct: 516 PGNQKSQAIRVHRKFAV-EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVR 574
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYW-TVKHP-QKVHVHP 583
+QL L+ + + SS + + + + I+SGF + AR G+Y T+ H ++ VH
Sbjct: 575 EQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVHL 634
Query: 584 SSGLAQVPKR-W---VIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKM 639
+ + R W VIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K
Sbjct: 635 FTVVPGTQSRYWGFRVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKR 694
Query: 640 PRV 642
+V
Sbjct: 695 AKV 697
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1221 (434.9 bits), Expect = 6.7e-134, Sum P(2) = 6.7e-134
Identities = 252/585 (43%), Positives = 370/585 (63%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L ++ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QP E G LGHEVGY IRF+DCT + T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----F 175
L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDA+KF +FN
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 176 AP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXX 229
P IL V GR +PV+I Y ++P +YI + + T ++IH T+ GD+L FLTGQ
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 230 XXXXXXXXXXRIRKL---GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ R L G K L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXX 406
YT ++ + + +TVPE+QR+NLA VIL LK LGID++L F F+ PP
Sbjct: 406 YTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 XXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
G L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LN+Y ++ +++ +WC ++F+ ++ + A +R
Sbjct: 524 PPNQKSHAIRVHRKFAV-EEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSY 570
+QL L+ + + SS + + + + I+SGF + AR G+Y
Sbjct: 583 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAY 627
Score = 112 (44.5 bits), Expect = 6.7e-134, Sum P(2) = 6.7e-134
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 595 VIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
VIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K +V
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKV 676
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 937 (334.9 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 204/477 (42%), Positives = 291/477 (61%)
Query: 178 ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXX 237
IL + GR YPV+IHY + SNYI I T ++IH TQ GDILVFLTGQ
Sbjct: 247 ILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTL 306
Query: 238 XXR---IRKLGTK--------IGELIVCPVYANLPTELQAKIFVPTPDGA--RKVVLATN 284
+ +R+ + + + P+Y+ L Q K+F D RK++++TN
Sbjct: 307 DDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTN 366
Query: 285 IAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCF 344
IAETS+TIDG+ YVVD G+ K+K Y+ ++G+ESL++ P SK+SA QRAGR+GR+ GKC+
Sbjct: 367 IAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCY 426
Query: 345 RLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXX 404
RLYT +Y++ + D T+PEIQR+NL N IL LK LGID++LNFDF+ PP
Sbjct: 427 RLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEV 486
Query: 405 XXXXGALNQVGELTK-VGRQMAEFPLDPMLSKMIV--ASDKFKCSNEIITIAALLSVGNS 461
GAL+ G+LT G MAEFP DP SKMI+ +S+ F CS+E ITI A+L++
Sbjct: 487 LYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNI-QG 545
Query: 462 VFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHA 521
+F +K +R + + GDH+ LLN++NS+ N S QWC + I +++M+
Sbjct: 546 LFTNQNHK------SRKHLLVKE-GDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRV 598
Query: 522 RDIRDQLTCLVERVGIELTS---SLCNLEA----MKKAIISGFLLHTARLQKNGSYWTVK 574
+R QL ++ I + S S N E ++KAI+SGF + A+LQ +GSY T++
Sbjct: 599 LQVRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIR 658
Query: 575 HPQKVHVHPSSGLA-QVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
K+ +HP+S L +WVI++E+ +TTKEYM+ VT ++P WLFEIAPHYY K
Sbjct: 659 EKHKLWLHPTSVLCLSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYKFK 715
Score = 388 (141.6 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+Q++R +LPIY R+ +L +++ +VI+G TG GK+TQIPQYL E+G++ + + CT
Sbjct: 48 IQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCT 107
Query: 61 QPXXXXXXXXXXXXXXEMGVK-LGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDP 118
QP EMG + +G VGYS+RF++ S+ +T +KY+TDGM++REM+ DP
Sbjct: 108 QPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDP 167
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----------LKLLISSATLDAEK 168
L YSV+M+DEAHER+L TD+L+G+ K + + R+ LKL+ISSATL+A
Sbjct: 168 LLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNAND 227
Query: 169 FSAYFNF 175
F +FN+
Sbjct: 228 FFNFFNY 234
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
Identities = 270/638 (42%), Positives = 388/638 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L+ +R++LPI+ R Q+L ++ V++GETGSGKTTQIPQYL+E G ++ G + TQ
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQ 117
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E +LG VGY++RFED TSE T +K++TDGM+LRE +SD L
Sbjct: 118 PRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLR 177
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDL-----KLLISSATLDAEKFSAYFNFA 176
YS +++DEAHERT+ TD+L G+ K + R +L K+++ SAT+D + FS YFN A
Sbjct: 178 KYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRA 237
Query: 177 PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-TQASGDILVFLTGQXXXXXXXX 235
P+L + GR++P++I YTK P+ +Y+ AA+V+ +IH AS DILVFLTGQ
Sbjct: 238 PVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSK 297
Query: 236 XXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGI 295
R L ++V P+YA+LP Q ++F P G RKV+++TNIAETS+TI GI
Sbjct: 298 TCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGI 357
Query: 296 KYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQED 355
KYVVD+G K K YNP +G+E L V +SK A QR GR+GR G C+RLYT + + E
Sbjct: 358 KYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EK 416
Query: 356 MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVG 415
E TVPEIQR NLA+VIL L + + ++L FDF+ P GAL
Sbjct: 417 FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKD 476
Query: 416 E---LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
+ LT +GR+MA FPL+P +K I+ S KF C+ EI+TI +LLSV +SV Y P ++
Sbjct: 477 DQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRDE 535
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
+ R F + GDHI LLN+Y ++K +K WC +NF+ ++M ++R QL +
Sbjct: 536 VQSVRKKFISSE-GDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREIC 594
Query: 533 ERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
++ + + SS ++E++++ + ++TA LQ +G+Y T Q V +HPSS L
Sbjct: 595 LKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKP 654
Query: 593 RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
V+Y L+ T K YMR + + EWL+E AP Y+ K
Sbjct: 655 ACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 863 (308.9 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 154/304 (50%), Positives = 224/304 (73%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 533 EQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 592
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMGV+LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L++Y
Sbjct: 593 RVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNY 652
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DA+KF+++F PI +PG
Sbjct: 653 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPG 712
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ L++H + A GDILVF+ GQ + +
Sbjct: 713 RTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEE 772
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L K L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 773 L-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 831
Query: 304 SKMK 307
K+K
Sbjct: 832 CKLK 835
Score = 449 (163.1 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 95/259 (36%), Positives = 145/259 (55%)
Query: 388 DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
+F S P G G LT GRQM EFPLDP LSKM++ S CS+
Sbjct: 853 EFYGSEPAFHWLQSALLLPFSGGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDMGCSS 912
Query: 448 EIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQW 507
EI+ I ++LSV ++FYRPK ++ +D R F ++ DH+ LNVY WK N+YS W
Sbjct: 913 EILLIVSMLSVP-AIFYRPKGREEESDQVREKFAVPES-DHLTYLNVYLQWKNNNYSTLW 970
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKN 567
C +FI ++M+ R++R QL ++ + + L S + + ++K I + + A+L+
Sbjct: 971 CNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGI 1030
Query: 568 GSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAP 624
G Y ++ H+HP+S G+ P +++YHELV+TTKEYM+ VT + EWL E+ P
Sbjct: 1031 GEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1089
Query: 625 HYYMLKDVEDLRKKMPRVA 643
+Y +K R++ R A
Sbjct: 1090 MFYSIKHAGKSRQENRRRA 1108
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 269/638 (42%), Positives = 390/638 (61%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXX 64
+R+ LPI+ R +L ++ + V++GETGSGKTTQIPQYL+EAG + G + TQP
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 65 XXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYS 124
E +LG VGY++RF+D TS++T +K++TDGM+LRE + DP L YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 125 VLMVDEAHERTLSTDILLGIFKDLVRLRSDL-----KLLISSATLDAEKFSAYFNFAPIL 179
V+++DEAHERT+ TD+L G+ K + R +L K+++ SAT+D ++FS YFN AP+L
Sbjct: 140 VVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVL 199
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-TQASGDILVFLTGQXXXXXXXXXXX 238
+ GR++P+++ YTK P+S+Y+ AA+V+ +IH +S DILVFLTGQ
Sbjct: 200 YLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCR 259
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+ L ++ V P+YA+LP Q ++F P G RKV+L+TNIAETS+TI GIKYV
Sbjct: 260 DIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYV 319
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
VD+G K K YNP+ G+E L V +SKA A QR GR+GR G C+RLYT + + E +
Sbjct: 320 VDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEF-EKFDK 378
Query: 359 NTVPEIQ---RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVG 415
TVPEIQ R NLA+V+L L L I ++L FDF+ P GA+ Q
Sbjct: 379 MTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKE 438
Query: 416 E---LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
+ LT +GR+MA FPL+P SK I+ S KF C+ EI+TI +LLSV +SV Y P ++
Sbjct: 439 DQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSV-DSVLYNPPARRDE 497
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
+ R F + GDH+ LLNVY ++K +K+WC +NF+ R+M D+R QL +
Sbjct: 498 VQSVRKKFISSE-GDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQLRDIC 556
Query: 533 ERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
++ + + SS + +++ + ++ A LQ +G+Y TV Q V +HPSS L
Sbjct: 557 VKLSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLFHCKP 616
Query: 593 RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
V+Y+ L+ T K YMR + + EWL++ AP Y+ K
Sbjct: 617 SCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFRRK 654
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 268/638 (42%), Positives = 390/638 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R+ LPI+ R Q+L ++ V++GETGSGKTTQIPQYL+E G + + TQ
Sbjct: 74 VEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVTQ 133
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E +LG VGY++RF+D TS+ T +K++TDGM+LRE +SD L
Sbjct: 134 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLLR 193
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDL-----KLLISSATLDAEKFSAYFNFA 176
YS +++DEAHERTL TD+L G+ K + R +L K+L+ SAT+D + FS YFN A
Sbjct: 194 KYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGA 253
Query: 177 PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-TQASGDILVFLTGQXXXXXXXX 235
P+L + GR++P++I YTK P+ +Y+ AA+V+ +IH +S DILVFLTGQ
Sbjct: 254 PVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAMSK 313
Query: 236 XXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGI 295
+ L ++V P+YA+LP Q ++F P G RKV+++TNIAETS+TI GI
Sbjct: 314 TCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGI 373
Query: 296 KYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQED 355
KYVVD+G K K YNP +G+E L V +SK A QR GR+GR G C+RLYT + + E
Sbjct: 374 KYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EK 432
Query: 356 MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL-NQV 414
E TVPEIQR NLA+V+L L + I ++L FDF+ P GAL ++
Sbjct: 433 FEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHRD 492
Query: 415 GELT--KVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT +GR+MA FPL+P +K I+ S KF C+ EI+TI ALLSV +S+ Y P +++
Sbjct: 493 GQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSV-DSILYNPPSRRDE 551
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
+ R F + GDH+ LLNVY ++K +K+WC +NF+ ++M ++R QL +
Sbjct: 552 VQSVRKKFVSSE-GDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQLRDIC 610
Query: 533 ERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
++ + + SS + E++++ + TA LQ +GSY T Q V +HPSS L
Sbjct: 611 IKMSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIHPSSVLFHCKP 670
Query: 593 RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
V+Y EL+ T+K YMR + + EWL+E AP ++ K
Sbjct: 671 ACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFRKK 708
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 863 (308.9 bits), Expect = 6.1e-131, Sum P(2) = 6.1e-131
Identities = 154/304 (50%), Positives = 224/304 (73%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQP
Sbjct: 530 EQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 589
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
EMGV+LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L++Y
Sbjct: 590 RVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNY 649
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DA+KF+++F PI +PG
Sbjct: 650 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPG 709
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
R +PV+I ++K P+ +Y++AA+ L++H + A GDILVF+ GQ + +
Sbjct: 710 RTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEE 769
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L K L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 770 L-EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 828
Query: 304 SKMK 307
K+K
Sbjct: 829 CKLK 832
Score = 442 (160.7 bits), Expect = 6.1e-131, Sum P(2) = 6.1e-131
Identities = 90/230 (39%), Positives = 139/230 (60%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNA 476
LT GRQM EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQV 934
Query: 477 RMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
R F ++ DH+ LNVY WK N+YS WC +FI ++M+ R++R QL ++ +
Sbjct: 935 REKFAVPES-DHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQR 993
Query: 537 IELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKR 593
+ L S + + ++K I + + A+L+ G Y ++ H+HP+S G+ P
Sbjct: 994 MSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD- 1052
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVA 643
+++YHELV+TTKEYM+ VT + EWL E+ P +Y +K R++ R A
Sbjct: 1053 YIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRA 1102
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
Identities = 261/638 (40%), Positives = 389/638 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++ +R++LPI+ R Q+L ++ V++GETGSGKTTQIPQYL+E G ++ G + TQ
Sbjct: 67 VELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQ 126
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E +LG VGY++RF+D TSE T +K++TDGM+LRE +SD L
Sbjct: 127 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLR 186
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDL-----KLLISSATLDAEKFSAYFNFA 176
YS +++DEAHERT+ TD+L G+ K + R +L K+++ SAT+D + FS YFN A
Sbjct: 187 KYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGA 246
Query: 177 PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-TQASGDILVFLTGQXXXXXXXX 235
P+L + GR++P+++ YTK P+++Y+ AA+V+ +IH +S DILVFLTGQ
Sbjct: 247 PVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSK 306
Query: 236 XXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGI 295
+ L ++V P+YA+LP Q ++F P G RKV+++TNIAETS+TI GI
Sbjct: 307 TCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGI 366
Query: 296 KYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQED 355
KYVVD+G K K YNP +G+E L V +SK A QR GR+GR G C+RLYT + + E
Sbjct: 367 KYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EK 425
Query: 356 MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVG 415
+ TVPEIQR NLA+V+L L + + ++L FDF+ P GAL
Sbjct: 426 FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKD 485
Query: 416 E---LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
+ LT +GR+MA FPL+P +K I+ S KF C+ EI+TI +LLSV +SV + P +++
Sbjct: 486 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREE 544
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
R F + GDH+ LLN+Y ++K +K WC +NF+ ++M ++R QL +
Sbjct: 545 VQGVRKKFISSE-GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDIC 603
Query: 533 ERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
++ + + SS ++E++++ + + TA LQ +G+Y T Q V +HPSS L
Sbjct: 604 LKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKP 663
Query: 593 RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
V+Y EL+ T K YMR + + +WL+E AP Y+ K
Sbjct: 664 ACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
Identities = 262/616 (42%), Positives = 387/616 (62%)
Query: 44 QYLHEAGYTKHGKV-GCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSE-KTV 101
+YL EAG+T G+V G TQP E G LGHEVGY IRF+DCT + T
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 102 LKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISS 161
+K++TDGM++REM+ DP L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++S
Sbjct: 118 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 177
Query: 162 ATLDAEKFSAYFN----FAP------ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEI 211
ATLDA+KF +FN P IL V GR +PV+I Y ++P +YI + + T ++I
Sbjct: 178 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKI 237
Query: 212 HATQASGDILVFLTGQXXXXXXXXXXXXRIRKL---GTKIGELIVCPVYANLPTELQAKI 268
H T+ GD+L FLTGQ + R L G K L V P+YA LP+ Q K+
Sbjct: 238 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKV 296
Query: 269 FVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASA 328
F RKV++ATN+AETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA
Sbjct: 297 FERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASA 356
Query: 329 MQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFD 388
QRAGR GR+ GKC+RLYT ++ + + +TVPE+QR+NLA VIL LK LGID++L F
Sbjct: 357 NQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFH 415
Query: 389 FLDSPPQXXXXXXXXXXXXXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSN 447
F+ PP G L++ LT+ +G ++AEFPL+PM +KM++ S F CS
Sbjct: 416 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQ 475
Query: 448 EIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQW 507
EI++IAA++ + N +F P N+K A F + GDH+ +LN+Y ++ +++ +W
Sbjct: 476 EILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAV-EEGDHLTMLNIYEAFIKHNKDSKW 533
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKN 567
C ++F+ ++ + A +R+QL L+ + + SS + + + + I+SGF + AR
Sbjct: 534 CQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHST 593
Query: 568 GSYWTVKHPQKVHVHPSSGL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHY 626
G+Y T++ ++H+HP+S L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+
Sbjct: 594 GAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHF 653
Query: 627 YMLKDVEDLRKKMPRV 642
Y L+ K +V
Sbjct: 654 YQQGTHLSLKAKRAKV 669
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
Identities = 269/661 (40%), Positives = 400/661 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+Q++R LPI+ R +L + + ++IVGETG GK+TQ+PQ+L EAG+ G+ + T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E LGH+VGY++RF+D + + T +K+MTDG++LRE+L+DP L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF----- 175
YS++M+DEAHER+ +TDILLG+ + ++++R+DL++++SSATLDAE F +F
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGN 249
Query: 176 -----APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXX 230
A I+ V GR +PV +H+TK +Y +A+ T + IH + GDILVFLTGQ
Sbjct: 250 SDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 231 XXXXXXXXXRIRKLGTKI---GELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAE 287
++R+L + L V P Y LP Q K F TP G RKVV+ATNIAE
Sbjct: 310 EDVCE----KLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAE 365
Query: 288 TSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLY 347
S+TI GI YV+D+GY K++ + G+E+L+ +SKASA QRAGR+GR PGKC+RLY
Sbjct: 366 ASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLY 425
Query: 348 TINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXX 407
+ + E + TVPEIQR +A+ IL LK LG+ ++ F +L PP
Sbjct: 426 PESEF-ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYA 484
Query: 408 XGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP 466
GA+++ +LT +G QMAEFPL PM SK ++ S +F CS E++TI A++ + VF P
Sbjct: 485 LGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITP 543
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRD 526
++ AD R F + GDH+ +LNV+ + EN SK+WC D+F+ +R + A ++R
Sbjct: 544 YRQRHQADVIRKKFAV-EEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRS 602
Query: 527 QLTCLVERVGIELTSS--LCNL-EAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHP 583
QL L++R IE SS L N E +++ +++GF A+ G Y TVK +++
Sbjct: 603 QLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYK 662
Query: 584 SSGLA---QVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMP 640
S + PK WVI+ E++ ++ +R VT ++PEWL+E+APHYY +L +K
Sbjct: 663 GSSIMFKKDYPK-WVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRM 718
Query: 641 R 641
R
Sbjct: 719 R 719
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 271/644 (42%), Positives = 388/644 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L ++R+ LPI YR+Q+L ++++QVV++VGETGSGK+TQ+PQYL+E G+ G +G T+
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITE 99
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G +G VGY +RF + S T +K+MT+G++LRE+L+DP L
Sbjct: 100 PRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLT 159
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF------ 175
Y V++VDEAHER + TD++LG+ K ++R RS LKL+ISSAT+DA FS +F++
Sbjct: 160 QYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEV 219
Query: 176 APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXX 235
+ L + GR +PV Y P ++Y+ + T ++H + GDIL FLTGQ
Sbjct: 220 SVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALD 279
Query: 236 XXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGI 295
I ++ L V P+Y ++ + Q +F P G RKVVLATNIAETS+TI GI
Sbjct: 280 LLREYIAS--SEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGI 337
Query: 296 KYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQED 355
YV+D GY K+KWYNPKT +SL++ P+SKASA+QRAGR+GR PGK +RLYT + Y E
Sbjct: 338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDY-EA 396
Query: 356 MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVG 415
+ PE++R+ L+ IL LK LGI ++L FDF PP A+++ G
Sbjct: 397 LAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQG 456
Query: 416 ELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD 474
LTK VG +AE P MLSKM+ S + CS EIITI ALL V S+F RP +
Sbjct: 457 NLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQV-QSIFSRPASAVAQQS 515
Query: 475 N--ARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQL-TCL 531
A F + GD I +LN Y + E +K++C F+ +R++K A +R+QL T
Sbjct: 516 GRIAHRKFEVAE-GDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVA 574
Query: 532 VERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVP 591
++ GI + S ++E + K I +GF A L +G Y + ++ +HP+S L +P
Sbjct: 575 RKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLP 634
Query: 592 K-RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED 634
+ ++V+Y EL+ TTK +M VT +K EWL E+APHYY V D
Sbjct: 635 QAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQTTVRD 678
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 260/609 (42%), Positives = 369/609 (60%)
Query: 32 GETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIR 91
GETGSGKTTQ+PQYL+E G + G + TQP E +LG VGY++R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 92 FEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRL 151
F+D +SE T +K++TDGM+LRE +SD L YS +++DEAHERT+ TD+L G+ K R
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 152 RSDL-----KLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNYIDAAIV 206
R +L K+++ SAT+D + FS YFN A +L + GR++P+++ YTK P+ +Y+ AA+V
Sbjct: 126 RKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALV 185
Query: 207 TTLEIHA-TQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQ 265
+ +IH +S DILVFLTGQ + L ++V P+YA+LP Q
Sbjct: 186 SVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQ 245
Query: 266 AKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISK 325
++F P G RKV++ATNIAETS+TI GIKYVVD+G K K YNP +G+E L V +SK
Sbjct: 246 LRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 305
Query: 326 ASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLL 385
A QRAGR+GR G C+RLYT N + E E TVPEIQR NLA+V+L L + + ++L
Sbjct: 306 TQAWQRAGRAGREDSGICYRLYTENEF-EKFEKMTVPEIQRCNLASVLLQLLAMKVPNVL 364
Query: 386 NFDFLDSPPQXXXXXXXXXXXXXGAL----NQVGELTKVGRQMAEFPLDPMLSKMIVASD 441
FDF+ P GAL NQ+ LT +GR+MA FPL+P +K I+ S
Sbjct: 365 TFDFMSKPSPDHMQAAVAQLDLLGALERKDNQL-TLTPIGRKMAAFPLEPKFAKTILLSP 423
Query: 442 KFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEN 501
KF C+ EI+TI +LLSV +SV Y P +++ R F + GDHI LLN+Y ++K
Sbjct: 424 KFHCTEEILTIVSLLSV-DSVLYNPPSRRDEVQAMRKKFLSSE-GDHITLLNIYRTFKSL 481
Query: 502 DYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHT 561
K WC +NF+ R+M A ++R QL + ++ + + S ++E++++ + +
Sbjct: 482 GGDKDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMSA 541
Query: 562 ARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFE 621
A LQ +G+Y T Q V +HPSS L V+Y EL+ T+K YMR + + EWL+E
Sbjct: 542 AELQPDGTYTTTDSRQPVAIHPSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYE 601
Query: 622 IAPHYYMLK 630
AP Y+ K
Sbjct: 602 AAPDYFRRK 610
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 260/592 (43%), Positives = 386/592 (65%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY----TKHGK- 56
+Q++RK+LP + R +L +++NQV +++GETGSGKTTQ+ Q+L+E G+ K+G+
Sbjct: 351 IQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEK 410
Query: 57 --VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCT-SEKTVLKYMTDGMVLRE 113
+ CTQP EM KLG EVGYSIRFED T ++KTV+KYMT+G++LRE
Sbjct: 411 RIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLRE 470
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+L+DP L +YS +++DEAHER+L+TDILLG+FK+L+ R DLKL+++SAT++A +F+ +F
Sbjct: 471 ILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFF 530
Query: 174 NFAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-------TQAS-GDILVFLT 225
AP +PGR +PVE+ + + +Y++ A+ L IH A+ GDILVF+T
Sbjct: 531 GVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMT 590
Query: 226 GQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNI 285
GQ ++ L L + P+Y+ +P +LQ KIF T RKVV+ATNI
Sbjct: 591 GQEDIEITCDLIKEKLNLLEDP-PPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNI 649
Query: 286 AETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFR 345
AETSLT+DGIKYV+D G K+K YNPK GM++L V PIS A+A QR+GR+GRTG G +R
Sbjct: 650 AETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYR 709
Query: 346 LYTINSYQED-MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXX 404
LYT + + D M +PEIQR+NL+N++L+LK+L ++D+ +F FLD PP+
Sbjct: 710 LYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYD 769
Query: 405 XXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDK--FKCSNEIITIAALLSVGNSV 462
GAL+ +GELTK+G M +FP++P L+K+I+ S + F CS E++TI A+LSV N +
Sbjct: 770 LWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPN-I 828
Query: 463 FYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEN------DYSK--QWCYDNFIQ 514
F RPK + AD AR F ++ DH+ LLNV+N W N +Y+K WC NF+Q
Sbjct: 829 FNRPKERANEADMAREKFIISES-DHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQ 887
Query: 515 FRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQK 566
+S+ A+DI+ QL ++++ + + S + + ++K + + F +A+L K
Sbjct: 888 LKSLYRAKDIKHQLMLIMKKNKLAILKSKTD-DDIRKCLCASFYQQSAKLTK 938
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 184/433 (42%), Positives = 269/433 (62%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
GDILVF+TGQ ++ L L + P+Y+ +P +LQ KIF T R
Sbjct: 583 GDILVFMTGQEDIEITCDLIKEKLNLLEDP-PPLDIFPIYSTMPQDLQKKIFNKTNLQRR 641
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
KVV+ATNIAETSLT+DGIKYV+D G K+K YNPK GM++L V PIS A+A QR+GR+GR
Sbjct: 642 KVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGR 701
Query: 338 TGPGKCFRLYTINSYQED-MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQX 396
TG G +RLYT + + D M +PEIQR+NL+N++L+LK+L ++D+ +F FLD PP+
Sbjct: 702 TGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKD 761
Query: 397 XXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDK--FKCSNEIITIAA 454
GAL+ +GELTK+G M +FP++P L+K+I+ S + F CS E++TI A
Sbjct: 762 LLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVA 821
Query: 455 LLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEN------DYSK--Q 506
+LSV N +F RPK + AD AR F ++ DH+ LLNV+N W N +Y+K
Sbjct: 822 MLSVPN-IFNRPKERANEADMAREKFIISES-DHLTLLNVFNQWNINLNKFKGNYTKINN 879
Query: 507 WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQK 566
WC NF+Q +S+ A+DI+ QL ++++ + + S + + ++K + + F +A+L K
Sbjct: 880 WCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTD-DDIRKCLCASFYQQSAKLTK 938
Query: 567 ---NGS--YWTVKHP-QKVHVHPSSGL--AQVPKRWVIYHELVLTTKEYMRQVTELKPEW 618
NG + ++H K+ +HP+S L + + +VIYHELVLT KEYM VT + P W
Sbjct: 939 MNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVDPIW 998
Query: 619 LFEIAPHYYMLKD 631
L E ++ + D
Sbjct: 999 LLEYGYKFFGVAD 1011
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 237/535 (44%), Positives = 348/535 (65%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LPI + E+++ V++N VVVI+GETGSGK+TQ+ Q LH GYTK G + TQP
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
E+ V LG +VGY+IRFED T+ KT +KY+TDG++LRE LS+P L+ YSV+++
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123
Query: 129 DEAHERTLSTDILLGIFKDLVRLR-SDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYP 187
DEAHER+L+TDILLG+ K LVR+R S+ K+LI+SATLD EK S +F+ P+L VPG+ YP
Sbjct: 124 DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183
Query: 188 VEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGT- 246
VEI Y+K +YI++++ ++IH + GDIL+F+TGQ ++R L
Sbjct: 184 VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEG 243
Query: 247 KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKM 306
+ I+ P++ +LP E+Q ++F P P R+ +++TNIAETSLT+DG+ YV+DSGY K
Sbjct: 244 SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQ 303
Query: 307 KWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQR 366
+ YNP +GM SL V ISK A QRAGR+GRT PGKC+RLY + Y++D D T+PEIQR
Sbjct: 304 RQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQR 363
Query: 367 TNLANVILILKNLGIDDL--LNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQM 424
T+LA +L LK+L + D+ L FDFLD+P A+++ G +T++GR M
Sbjct: 364 TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTM 423
Query: 425 AEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVF---YRPKNKKFLADNARMNFY 481
++ PL+P LS+ ++ +++ C ++ +T+ A+LS ++ +P KK D N
Sbjct: 424 SDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDS-NLP 482
Query: 482 QGDA-GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERV 535
G GDHI LL ++ SW +Y WC +N +Q R M +D+R QL +++++
Sbjct: 483 NGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKI 537
Score = 207 (77.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 60/198 (30%), Positives = 100/198 (50%)
Query: 465 RPKNKKFLADNARMNFYQGDA-GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARD 523
+P KK D N G GDHI LL ++ SW +Y WC +N +Q R M +D
Sbjct: 467 KPSEKKRKHDEDS-NLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKD 525
Query: 524 IRDQLTCLVERVG---IEL------TSSLCNLEAMKKAIISGFLLHTA-RLQKNGSYWTV 573
+R QL +++++ +E+ +SS + ++KA+ G A R+ ++ Y T+
Sbjct: 526 VRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTL 585
Query: 574 K-HPQKVHVHPSSGLAQ----VPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
Q V VHPSS L+ + +V+YHEL+ TT+ +MR V + W +AP +
Sbjct: 586 SFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAW---VAP---I 639
Query: 629 LKDVEDLRKKMPRVAGRP 646
+ +E L + +++G P
Sbjct: 640 KRKIEKLNVR--KLSGGP 655
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 247/604 (40%), Positives = 370/604 (61%)
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
+G TQP E G ++G EVGYSIRFED TSE T +K++TDG+++RE L
Sbjct: 70 IGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALV 129
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN-- 174
DP L YS++MVDEAHER++STDILLG+ K + + R +L+++ISSATL AE+F A+F+
Sbjct: 130 DPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSST 189
Query: 175 --------------FAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDI 220
I+ + GR YP++I Y ++P +Y+ A+ T L++H + GDI
Sbjct: 190 LGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDI 249
Query: 221 LVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVV 280
LVFLTG+ R L ++ L+ P+++ L TE Q IF P RKV+
Sbjct: 250 LVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVI 309
Query: 281 LATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGP 340
+TNIAE S+TI GI YVVDSG+ K++ YNPKTG+E+L PISKA+A QRAGR+GRT P
Sbjct: 310 FSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKP 369
Query: 341 GKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXX 400
GKCFRLYT SY + D +PE+QR+NLA IL LK LGID++L+FDFL PP
Sbjct: 370 GKCFRLYTEESYTS-LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTK 428
Query: 401 XXXXXXXXGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVG 459
GAL+ +LTK +G +MAE +DPM++K +++++ F C +E++TIAA+ S G
Sbjct: 429 ALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAG 488
Query: 460 NSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQ-WCYDNFIQFRSM 518
V+ + + ++ ++ R F G+ GDH+ LNVY ++ + +C++N + +++M
Sbjct: 489 GDVWIQHEGERKQFESRRRKFAAGE-GDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTM 547
Query: 519 KHARDIRDQLTCLVERVGIELTSSLCNL-----------EAMKKAIISGFLLHTARLQKN 567
A IR QL +ER GI + +L + E +++ + +G+ H AR+Q +
Sbjct: 548 SRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQAD 607
Query: 568 GSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT-TKEYMRQVTELKPEWLFEIAPHY 626
G++ TV+ +H HPSS + WVI+HE++ T K ++R +++++ WL E AP +
Sbjct: 608 GTFQTVQGGTTLHAHPSSLMFNRKADWVIFHEVMETGAKTFIRDISKVEKCWLLEYAPDF 667
Query: 627 YMLK 630
Y +K
Sbjct: 668 YQVK 671
Score = 462 (167.7 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 90/174 (51%), Positives = 123/174 (70%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
L K LPI +++ +L V+ N V V+VG+TGSGKTTQIPQ+L +AG+ GK +G T
Sbjct: 14 LHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVT 73
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E G ++G EVGYSIRFED TSE T +K++TDG+++RE L DP L
Sbjct: 74 QPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLL 133
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN 174
YS++MVDEAHER++STDILLG+ K + + R +L+++ISSATL AE+F A+F+
Sbjct: 134 SRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFS 187
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 252/634 (39%), Positives = 383/634 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+++++K+LP+++ R ++L+ ++ N V+I+ ETGSGKTTQIPQ+L AGY K+G +G TQ
Sbjct: 61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+ +G VGY++RFED TS T ++++TDG++LRE + D L
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLL 180
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLR-----SDLKLLISSATLDAEKFSAYFNFA 176
YSV+++DEAHERT++ D+L GI KD + R ++LK++++SAT+D + F YFN
Sbjct: 181 KYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCK 240
Query: 177 PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASG-DILVFLTGQXXXXXXXX 235
+ + GR YPV + +TK +YI +VT IH T D+L+FLTGQ
Sbjct: 241 GMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQ 299
Query: 236 XXXXRIRKLGTK-IGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDG 294
++ K+ T +L V +YA L Q + FVPTP RKV+LATNIAETS+TI G
Sbjct: 300 QIR-QLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPG 358
Query: 295 IKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQE 354
I+ V+D G+ K K +N G++ L ISKA A QRAGR+GR G C+R YT + +
Sbjct: 359 IRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT-KAEMD 417
Query: 355 DMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQV 414
D T PEI RTN +++L L L ID NFDFLD P + GA+ +
Sbjct: 418 SFADATQPEILRTNPTSMVLQLLALDID-CNNFDFLDPPLEDGLRSAYKSLDALGAI-KT 475
Query: 415 GE---LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
G+ +T +GRQM ++PLDP SK+++ + F C EI+++ ++LS + VF K
Sbjct: 476 GDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLS-SDHVFVSNSEKNE 534
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCL 531
+A A F Q GDH+ LLNV+N + +++ K WC+DN++ RS+ +AR++R QL +
Sbjct: 535 MAALAHAKF-QSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREI 593
Query: 532 VERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL-AQV 590
E + + L SS ++E +KK I++GF + A LQ++G Y T + +HPSS L +
Sbjct: 594 SEHLHLALNSS-DDIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKY 652
Query: 591 PKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAP 624
++++ E+V T + ++RQVTE+ EW+ E+ P
Sbjct: 653 KPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 241/629 (38%), Positives = 378/629 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY-TKHGKVGCT 60
L ++K LPI YR Q+L AV++NQ+ +++G TG GKTTQIPQ+L+EAG+ +++G +GCT
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCT 77
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E+ G GYSI+F+ SEKT +KYMTDG++L E+ DP L
Sbjct: 78 QPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLL 137
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI-- 178
E YS++++DE HERTLSTD+LLG+ K ++ R+D +L++SSA++DA K S +F +
Sbjct: 138 ERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCT 197
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
+ + G+ +PVE + + P NY+D+AI T + I++T GDILVFL+G+
Sbjct: 198 MSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIE 257
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+ L+ P++A L + Q ++F RKV+ +TNIAETS+TIDGI YV
Sbjct: 258 DSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYV 317
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
VDSG++K + YNP T L+ PISK+SA+QR+GR+GRT GK FRLYT +Y M++
Sbjct: 318 VDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSL-MKE 376
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELT 418
+I +++ ++L LK LG+ ++L F F PP G L++ G LT
Sbjct: 377 EFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLT 436
Query: 419 K-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP----KNKKFLA 473
+G Q++ LD +SK ++ S++F C++EI++IA++L+ G VFY P KN F+A
Sbjct: 437 DPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGE-VFYNPTSSSKNDAFVA 495
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
++ F+ + GD I LNV+ S+ N QWC N++ +++++ A DIR L +
Sbjct: 496 HSS---FFANE-GDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLN 551
Query: 534 RVGIELTSSLCNLEAMK--KAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVP 591
+ I L + + K K ++ GF+ + A LQ +GSY T+ Q V + SS L +
Sbjct: 552 KFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKK 610
Query: 592 KRWVIYHELVLT-TKEYMRQVTELKPEWL 619
W++Y V + T+ +++ +++++ WL
Sbjct: 611 TPWIMYSSAVESETQIFVKNISKIESFWL 639
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
Identities = 229/554 (41%), Positives = 341/554 (61%)
Query: 86 VGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIF 145
VGY++RF+D TSE T +K++TDGM+LRE +SD L YS +++DEAHERT+ TD+L G+
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 146 KDLVRLRSDL-----KLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNY 200
K + R +L K+++ SAT+D + FS YFN AP+L + GR++P+++ YTK P+++Y
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 180
Query: 201 IDAAIVTTLEIHA-TQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYAN 259
+ AA+V+ +IH +S DILVFLTGQ + L ++V P+YA+
Sbjct: 181 LHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYAS 240
Query: 260 LPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLL 319
LP Q ++F P G RKV+++TNIAETS+TI GIKYVVD+G K K YNP +G+E L
Sbjct: 241 LPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLA 300
Query: 320 VYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNL 379
V +SK A QR GR+GR G C+RLYT + + E + TVPEIQR NLA+V+L L +
Sbjct: 301 VQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMTVPEIQRCNLASVMLQLLAM 359
Query: 380 GIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE---LTKVGRQMAEFPLDPMLSKM 436
+ ++L FDF+ P GAL + LT +GR+MA FPL+P +K
Sbjct: 360 KVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKT 419
Query: 437 IVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYN 496
I+ S KF C+ EI+TI +LLSV +SV + P +++ R F + GDH+ LLN+Y
Sbjct: 420 ILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKFISSE-GDHMTLLNIYR 477
Query: 497 SWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISG 556
++K +K WC +NF+ ++M ++R QL + ++ + + SS ++E++++ +
Sbjct: 478 TFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHS 537
Query: 557 FLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKP 616
+ TA LQ +G+Y T Q V +HPSS L V+Y EL+ T K YMR + +
Sbjct: 538 LFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDA 597
Query: 617 EWLFEIAPHYYMLK 630
+WL+E AP Y+ K
Sbjct: 598 QWLYEAAPEYFRRK 611
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 1003 (358.1 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 218/549 (39%), Positives = 329/549 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT--KHGKVGC 59
L K R+TLP+Y ++ +++ ++ N V V++GETGSGK+TQIPQ++ E Y KHG +
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAV 133
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E G KLG +VGYS+RF++ T+ +T LKY+TDGM+LRE++ +
Sbjct: 134 TQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSD 193
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVR-LRSDLKLLISSATLDAEKFSAYFNFAPI 178
L YSV+++DEAHERT+ TD++LG K L++ R DL++++ SATL AEKFS +FN API
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPI 253
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
L V GR++ V+ +Y KAP + +DA I ++I+ + GDIL FL GQ
Sbjct: 254 LFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIME 313
Query: 239 XRIRKLGTKIG-ELIV-CPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIK 296
+ + + LIV P+YA LP Q+ +F P RKVV +TNIAETS+TI G+K
Sbjct: 314 KIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVK 373
Query: 297 YVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDM 356
+VVDSG K+K + + G+ +LL PIS+ASAMQR+GR+GR GK FRLY + Y + +
Sbjct: 374 FVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVK-L 432
Query: 357 EDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE 416
+ PEI R+++ + +L+LK G+DDLLN+ + ++P + GAL+ G+
Sbjct: 433 PKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGK 492
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNA 476
+TK G+QMA PL P LS +++ + + C +++I I + LSV N + ++ +
Sbjct: 493 ITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNER 552
Query: 477 RMNFYQGDA--GDHIALLNVYNSW-----KENDYSKQ---WCYDNFIQFRSMKHARDIRD 526
R++ GD I L +++ + K D S + WC I R K+ +RD
Sbjct: 553 RLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRD 612
Query: 527 QLTCLVERV 535
QL +R+
Sbjct: 613 QLRVYCKRL 621
Score = 129 (50.5 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 41/142 (28%), Positives = 64/142 (45%)
Query: 495 YNSWKENDYSKQ---WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT-----SSLCN- 545
Y K D S + WC I R K+ +RDQL +R+ ++ S
Sbjct: 578 YELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGE 637
Query: 546 ----LEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK-RWVIYHEL 600
+ + K ++GF+ +TA + SY TV + + +HPSS L ++Y E
Sbjct: 638 DGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEY 697
Query: 601 VLTTKEYMRQVTELKPEWLFEI 622
V TTK Y R V+ ++ WL E+
Sbjct: 698 VFTTKGYARNVSRIELSWLQEV 719
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 967 (345.5 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 211/550 (38%), Positives = 317/550 (57%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXX 65
R+ LPIYH++++++ + NQV +++GETGSGK+TQIPQ+L K +G TQP
Sbjct: 179 REKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPEN-PK--MIGVTQPRRV 235
Query: 66 XXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSV 125
E G KLG +VGY +RF + T+ +T LKY+TDGM+LRE++ D L YS
Sbjct: 236 AAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYST 295
Query: 126 LMVDEAHERTLSTDILLGIFKDLVRL--RSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++DEAHERT+ TD+++G K ++ R DLK+++ SATL+AE FS +F APIL + G
Sbjct: 296 IILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEG 355
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
+ YPV Y A + +D I + ++I+ + GD+L FL GQ +
Sbjct: 356 KMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQ 415
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L + ++ P+YA L Q+KIF P G RKV+LATNIAETS+T+ G+KYV+DSG
Sbjct: 416 LPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGL 475
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K + G+ +LL PIS+ASA QRAGR+GR GK FRLY ++Y + E
Sbjct: 476 RKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMA-LPKQQESE 534
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
I+R ++ +L LK LG+DDLLN+ +L+ P Q GALN G++T +G +
Sbjct: 535 IKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYK 594
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVF-YRPKNKKFLADNARMNFYQ 482
M+ PL P LS +++ + +F + +I IA+ LSV N + + + + R +
Sbjct: 595 MSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHCPL 654
Query: 483 GDA-GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
G+ GD IAL + +++ K+WC + F+ K+ I+ QL + I+
Sbjct: 655 GNIHGDLIALYEYFQAYQAQ--GKEWCKELAFSFKGFKNVEKIKYQLQEYMMTT-IKQDD 711
Query: 542 SLCNLEAMKK 551
SL N E K+
Sbjct: 712 SLTNAEKNKQ 721
Score = 138 (53.6 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 527 QLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSG 586
QL L ++ E T ++ ++ K+ + G++ +TA + S+ T Q + VHPSS
Sbjct: 721 QLAKLRAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHPSST 780
Query: 587 LAQVPKR-WVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
L P ++Y E V TTK Y R V+ ++ WL EIAPH
Sbjct: 781 LFGKPNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAPH 820
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 721 (258.9 bits), Expect = 9.1e-105, Sum P(3) = 9.1e-105
Identities = 164/461 (35%), Positives = 261/461 (56%)
Query: 178 ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQXXXXXXXXX 236
+ + GR++PV+ Y+ P +++DAA+ +IH + GDILVFLTGQ
Sbjct: 362 VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENL 421
Query: 237 XXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIK 296
+ + ++ V P++A LP Q ++FVP P RK++LATNIAETS+T+ G++
Sbjct: 422 VNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVR 481
Query: 297 YVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDM 356
YVVD G +K+K + + G++SLLV PISK++A+QR GR+GR PG+C+RLYT Y
Sbjct: 482 YVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLALD 541
Query: 357 EDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE 416
E NT PEI R +L+ IL +K G+D+++ F FL PP+ AL++ G+
Sbjct: 542 EVNT-PEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGK 600
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKF--KCSNEIITIAALLSVGNSVFYRP--KNKKFL 472
+++ G +A+ PL P L ++++A+ F C ++I I + LSV N +F + KK
Sbjct: 601 ISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVEN-IFLNTTSEEKKEA 659
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSW-KENDYSKQWCYDNFIQFRSMKHARDIRDQLT-- 529
A+ AR + Y+ + GDH+ +L ++ EN K W + + R+M+ D+R QLT
Sbjct: 660 AEAARRDLYRRE-GDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQLTAQ 718
Query: 530 CLVERVGIELTSSL-CNLEAMK--------KAIISGFLLHTARLQKNGSYWTVKHPQKVH 580
C ++ T S + +++ K+ + GF +TARL +GSY TV Q V
Sbjct: 719 CRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGNQTVA 778
Query: 581 VHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFE 621
+HPSS L ++Y+E V T + Y R V+ ++ +W+ E
Sbjct: 779 IHPSSVLFGKKVEAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 219 (82.2 bits), Expect = 9.1e-105, Sum P(3) = 9.1e-105
Identities = 53/143 (37%), Positives = 77/143 (53%)
Query: 46 LHEAGYTKHGKVG-C---TQPXXXXXXXXXXXXXXEMGVKLGH-----EVGYSIRFEDCT 96
+ E G K VG C TQP EMG LG +VGYS+RF+
Sbjct: 198 VQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSV 257
Query: 97 SEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD-- 154
S T +K++T+GM+L+EML DP L YS ++VDE HER ++ D+++G ++LV + +
Sbjct: 258 SPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGR 317
Query: 155 ----LKLLISSATLDAEKFSAYF 173
LK ++ SAT D E +F
Sbjct: 318 GGVPLKAVVMSATADMESLQEFF 340
Score = 131 (51.2 bits), Expect = 9.1e-105, Sum P(3) = 9.1e-105
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 1 MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCT 60
ML + RK LPI+ + +++ + +++N V++++GETGSGK+TQIPQ+L + + + K
Sbjct: 139 MLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWCRPTKTTIV 198
Query: 61 Q 61
Q
Sbjct: 199 Q 199
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 243/634 (38%), Positives = 362/634 (57%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ R ++ A+++NQVV++ GETGSGKTTQ+P+ EAG G +G TQP
Sbjct: 74 LPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPRRIAAR 133
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
E+ LG VGY +RF D T +++K MTDG++L E +D L+ Y L+V
Sbjct: 134 SVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQYDTLIV 193
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPV 188
DEAHER+L+ D LLG K L+ R DLKL+I+SAT+D E+FS +F+ API+RVPGR YPV
Sbjct: 194 DEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPV 253
Query: 189 EIHYTKAPESNYIDA---------AIVTTL-EIHATQASGDILVFLTGQXXXXXXXXXXX 238
EI Y + P+S ++ AI+ + E+H + +GDIL+FL+G+
Sbjct: 254 EIRY-RPPDSAEEESDETERGEQQAILDAVDELHR-ENTGDILIFLSGEREIRDTAES-- 309
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+RK E++ P+Y+ L Q KIF P G R++VLATN+AETSLT+ GI+ V
Sbjct: 310 --LRKHHPADCEVL--PLYSRLTVSEQEKIF--KPHGRRRIVLATNVAETSLTVPGIRGV 363
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
+D+GY+++ Y+ ++ ++ L + IS+ASA QRAGR GR GPG C RLY+ + E
Sbjct: 364 IDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLNRPEF 423
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELT 418
T PEI RTNLA VIL +K L + D+ F F++ P + AL+ G LT
Sbjct: 424 -TDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQGRLT 482
Query: 419 KVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARM 478
++GR++A P+DP L ++++A + C +E+ I A LSV + RP +K AD
Sbjct: 483 ELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPR-ERPADKAQAADQKHA 541
Query: 479 NFYQGDAGDHIALLNVYNSWKENDY----SK--QWCYDNFIQFRSMKHARDIRDQLTCLV 532
F D+ D +A+L ++N ++E SK Q+C DNF+ M+ RDI Q+ +V
Sbjct: 542 RFRHPDS-DFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVV 600
Query: 533 E-RVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVP 591
+ +G+ + + +A+++G L H Q Y V+ QK + P S L +
Sbjct: 601 KGELGLRPNQVPADYGEIHRALLTGLLCHVGFRQDQNEYVGVRG-QKFQIFPGSFLFKTR 659
Query: 592 KRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
W+I E V T++ Y R V ++PEW+ + H
Sbjct: 660 PVWIISAEQVETSRVYARTVARIEPEWIEKCGAH 693
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 222/630 (35%), Positives = 351/630 (55%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ RE + +A+ NQVV+I GETGSGKTTQ+P+ E G G +G TQP
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
E+ LG VG+ +RF D ++ +K MTDG++L E+ SD L+ Y +++
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPV 188
DEAHER+L+ D +LG K +++ R DLK++I+SAT+D E+FS +FN API+ V GR YPV
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 189 EIHYTKAPESNYIDA----AIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKL 244
E Y + D I ++ + GDIL+F+ G+ ++ +
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAE----QLNRR 311
Query: 245 GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYS 304
+ E++ P+YA L Q+K+F + R++VLATN+AETSLT+ GI+YV+D G +
Sbjct: 312 NYRDTEIL--PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPGTA 367
Query: 305 KMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEI 364
++ Y+ +T ++ L + PIS+ASA QR GR GR GPG C RLY + + T PEI
Sbjct: 368 RISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFN-NRPAFTDPEI 426
Query: 365 QRTNLANVILILKNLGIDDLLNFDFLDSP-PQXXXXXXXXXXXXXGALNQVGE--LTKVG 421
RTNLA+VIL + +G+ D+ F F++ P P+ Q G LT +G
Sbjct: 427 LRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLG 486
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
RQ+++ P+DP L++M++ S + C NE++ IA+ LS+ + RP +KK +D A F
Sbjct: 487 RQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQASDEAHRRFA 545
Query: 482 QGDAGDHIALLNVYNSWKENDYS------KQWCYDNFIQFRSMKHARDIRDQLTCLVERV 535
+ D ++ +N++ KE ++ C D ++ + ++ +D+ QL V +
Sbjct: 546 DPQS-DFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDL 604
Query: 536 GIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV 595
L + N +A+ +A++SG L H N Y ++ +K V P S LA+ +W+
Sbjct: 605 KWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLGARN-RKFFVFPGSPLAKKGPKWI 663
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+ EL+ T+K + R +++PEWL +A H
Sbjct: 664 MAAELMETSKLFARCCAKIEPEWLEPLAAH 693
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 222/630 (35%), Positives = 351/630 (55%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ RE + +A+ NQVV+I GETGSGKTTQ+P+ E G G +G TQP
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
E+ LG VG+ +RF D ++ +K MTDG++L E+ SD L+ Y +++
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPV 188
DEAHER+L+ D +LG K +++ R DLK++I+SAT+D E+FS +FN API+ V GR YPV
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 189 EIHYTKAPESNYIDA----AIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKL 244
E Y + D I ++ + GDIL+F+ G+ ++ +
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAE----QLNRR 311
Query: 245 GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYS 304
+ E++ P+YA L Q+K+F + R++VLATN+AETSLT+ GI+YV+D G +
Sbjct: 312 NYRDTEIL--PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPGTA 367
Query: 305 KMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEI 364
++ Y+ +T ++ L + PIS+ASA QR GR GR GPG C RLY + + T PEI
Sbjct: 368 RISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFN-NRPAFTDPEI 426
Query: 365 QRTNLANVILILKNLGIDDLLNFDFLDSP-PQXXXXXXXXXXXXXGALNQVGE--LTKVG 421
RTNLA+VIL + +G+ D+ F F++ P P+ Q G LT +G
Sbjct: 427 LRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLG 486
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
RQ+++ P+DP L++M++ S + C NE++ IA+ LS+ + RP +KK +D A F
Sbjct: 487 RQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQASDEAHRRFA 545
Query: 482 QGDAGDHIALLNVYNSWKENDYS------KQWCYDNFIQFRSMKHARDIRDQLTCLVERV 535
+ D ++ +N++ KE ++ C D ++ + ++ +D+ QL V +
Sbjct: 546 DPQS-DFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDL 604
Query: 536 GIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV 595
L + N +A+ +A++SG L H N Y ++ +K V P S LA+ +W+
Sbjct: 605 KWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLGARN-RKFFVFPGSPLAKKGPKWI 663
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+ EL+ T+K + R +++PEWL +A H
Sbjct: 664 MAAELMETSKLFARCCAKIEPEWLEPLAAH 693
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 617 (222.3 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 139/398 (34%), Positives = 226/398 (56%)
Query: 265 QAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPIS 324
Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K +NP+ G++ L V PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 325 KASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDL 384
K+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+RT+L +V+L LK L I D+
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 385 LNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFK 444
+ F +LD P + A+++ G +T++G M EFPL P L+ ++ +
Sbjct: 399 IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLD 458
Query: 445 CSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGDAG---DHIALLNVYNSWKE 500
C + ++ IAA+LSV N VF RP + ++ + R AG D L ++ K
Sbjct: 459 CEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS 517
Query: 501 NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-----TSSLCNLEAMKKAIIS 555
+ WC ++I +R + A + QL L+ ++ + T E +++ + +
Sbjct: 518 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCA 577
Query: 556 GFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-RWVIYHELVLTTKEYMRQVT 612
G+ + AR ++ T+ VH+HPSS L Q K W+I+HE+++TTK Y R V
Sbjct: 578 GYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVC 637
Query: 613 ELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 638 PIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 675
Score = 392 (143.0 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 80/182 (43%), Positives = 112/182 (61%)
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
+G TQP EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSA 171
DP L +SV+++DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA 121
Query: 172 YFNFAPILRVPGRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLT 225
+F PI +PGR YPV + P YI A + T++IH + +GDILVFLT
Sbjct: 122 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 181
Query: 226 GQ 227
GQ
Sbjct: 182 GQ 183
Score = 178 (67.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 55/197 (27%), Positives = 85/197 (43%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 89 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 148
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 149 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 208
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T Q + T K + + T LTI GI V +
Sbjct: 209 TTLDGLLILPCYGSMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGITGVSHHARPR 268
Query: 306 MKWYNPKTGMESLLVYP 322
N K + + P
Sbjct: 269 NMTCNEKLNQQRRIFLP 285
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 225/636 (35%), Positives = 359/636 (56%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ R+ + +A+ +QVV++ GETGSGKTTQ+P+ E G K+G +G TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
EM +LG VGY +RF D S++T +K MTDG++L E+ +D L Y +++
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPV 188
DEAHER+L+ D +LG K L+ R DLK++I+SAT+D E+FS +F+ API+ V GR YPV
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPV 266
Query: 189 EIHYTK--APESNYIDA----AIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIR 242
E+ Y + + D I ++ + GDIL+F+ G+ R
Sbjct: 267 EVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKR-- 324
Query: 243 KLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
+ + + P+YA L Q KIF P R++VLATN+AETSLT+ GIKYV+D G
Sbjct: 325 ----NLRDTEIVPLYARLSAGEQNKIF--QPHAGRRIVLATNVAETSLTVPGIKYVIDPG 378
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVP 362
+++ Y+ +T ++ L + PIS+ASA QR GR GRT G C RLY+ + E T P
Sbjct: 379 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEF-TDP 437
Query: 363 EIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN-QVGE----L 417
EI RTNLA+VIL + LG+ D+ F F+++P + GA+N Q+ + L
Sbjct: 438 EILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRL 497
Query: 418 TKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNAR 477
T+ G+Q+A P+DP L++M++ + K C E++ IA+ LS+ + RP +K+ AD+
Sbjct: 498 TESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPR-ERPSDKQQSADDKH 556
Query: 478 MNFYQGDAGDHIALLNVYN-------SWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTC 530
F D+ D + L+N+++ + N + +Q C +++ + ++ +D+ QL
Sbjct: 557 RRFNHEDS-DFLTLVNLWHYIGQQQKALTSNQFRRQ-CKLDYLNYLRVREWQDVYTQLHQ 614
Query: 531 LVERVGIELTSSLCNLEAMKKAIISGFLLHTA-RLQKNGSYWTVKHPQKVHVHPSSGLAQ 589
+G +L + A+ AI+ G L H + Q+ Y ++ + ++ P+SGL +
Sbjct: 615 STREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARNA-RFNIFPASGLFK 673
Query: 590 VPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+WV+ ELV T+K + R V +++P+W+ +A H
Sbjct: 674 KQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKH 709
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 225/636 (35%), Positives = 359/636 (56%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ R+ + +A+ +QVV++ GETGSGKTTQ+P+ E G K+G +G TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
EM +LG VGY +RF D S++T +K MTDG++L E+ +D L Y +++
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPV 188
DEAHER+L+ D +LG K L+ R DLK++I+SAT+D E+FS +F+ API+ V GR YPV
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPV 266
Query: 189 EIHYTK--APESNYIDA----AIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIR 242
E+ Y + + D I ++ + GDIL+F+ G+ R
Sbjct: 267 EVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKR-- 324
Query: 243 KLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
+ + + P+YA L Q KIF P R++VLATN+AETSLT+ GIKYV+D G
Sbjct: 325 ----NLRDTEIVPLYARLSAGEQNKIF--QPHAGRRIVLATNVAETSLTVPGIKYVIDPG 378
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVP 362
+++ Y+ +T ++ L + PIS+ASA QR GR GRT G C RLY+ + E T P
Sbjct: 379 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEF-TDP 437
Query: 363 EIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN-QVGE----L 417
EI RTNLA+VIL + LG+ D+ F F+++P + GA+N Q+ + L
Sbjct: 438 EILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRL 497
Query: 418 TKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNAR 477
T+ G+Q+A P+DP L++M++ + K C E++ IA+ LS+ + RP +K+ AD+
Sbjct: 498 TESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPR-ERPSDKQQSADDKH 556
Query: 478 MNFYQGDAGDHIALLNVYN-------SWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTC 530
F D+ D + L+N+++ + N + +Q C +++ + ++ +D+ QL
Sbjct: 557 RRFNHEDS-DFLTLVNLWHYIGQQQKALTSNQFRRQ-CKLDYLNYLRVREWQDVYTQLHQ 614
Query: 531 LVERVGIELTSSLCNLEAMKKAIISGFLLHTA-RLQKNGSYWTVKHPQKVHVHPSSGLAQ 589
+G +L + A+ AI+ G L H + Q+ Y ++ + ++ P+SGL +
Sbjct: 615 STREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARNA-RFNIFPASGLFK 673
Query: 590 VPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+WV+ ELV T+K + R V +++P+W+ +A H
Sbjct: 674 KQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKH 709
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 219/633 (34%), Positives = 359/633 (56%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ ++ +L A++++QVV++ GETGSGKTTQ+P+ E G G +G TQP
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
E+ + G +GY +RF D S+ T++K MTDG++L E+ D L Y +++
Sbjct: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPV 188
DEAHER+L+ D LLG K+L+ R DLK++I+SAT+D E+FS +FN API+ V GR YPV
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256
Query: 189 EIHYTK-APESNYIDA----AIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK 243
E+ Y E++ + AI ++ + ++ GDIL+F++G+ + K
Sbjct: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA----LNK 312
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L + E++ P+YA L Q ++F + G R++VLATN+AETSLT+ GIKYV+D G
Sbjct: 313 LNLRHTEIL--PLYARLSNSEQNRVF-QSHSG-RRIVLATNVAETSLTVPGIKYVIDPGT 368
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
+++ Y+ +T ++ L + PIS+ASA QR GR GR G C RLY+ + + E T PE
Sbjct: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF-TDPE 427
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN---QVG--ELT 418
I RTNLA+VIL + LG+ D+ F F+++P + GA+ Q +LT
Sbjct: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487
Query: 419 KVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARM 478
+GRQ+++ P+DP L++M++ + K C E + I + LS+ + RP +K+ +D
Sbjct: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQASDEKHR 546
Query: 479 NFYQGDAGDHIALLNVYNSWKENDYS------KQWCYDNFIQFRSMKHARDIRDQLTCLV 532
F+ ++ D +A +N++N E + ++ C +++ + ++ +DI QL +V
Sbjct: 547 RFHDKES-DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605
Query: 533 ERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
+ +GI + S + A+++G L H + +T + + P SGL + P
Sbjct: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665
Query: 593 RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+WV+ ELV T++ + R + PEW+ +A H
Sbjct: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 461 (167.3 bits), Expect = 8.2e-96, Sum P(5) = 8.2e-96
Identities = 96/225 (42%), Positives = 143/225 (63%)
Query: 245 GTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYS 304
GT + V P+Y+ LPT+ Q ++F P PDG+R VVLATN+AETSLTI GI+YV DSG S
Sbjct: 669 GTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRS 728
Query: 305 KMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEI 364
K + Y+ TG++S V ISKASA QR GR+GRTGPG C+RLY+ Y+ D+++ +PE+
Sbjct: 729 KERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPEL 788
Query: 365 QRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQM 424
RT+L V+L LK++ + ++NF F P + A+++ G +T+VG M
Sbjct: 789 LRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVSEEGRVTQVGYTM 848
Query: 425 AEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
+ FPL P S++++ + C + +T+ A LS +F P+N+
Sbjct: 849 SIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAE-IFI-PENQ 891
Score = 439 (159.6 bits), Expect = 8.2e-96, Sum P(5) = 8.2e-96
Identities = 98/245 (40%), Positives = 141/245 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH-----GK 56
+Q R LP+ ++++ A+ N +VV+ G TGSGKTTQIPQ+L EAGY G
Sbjct: 350 IQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGM 409
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
+G TQP E+G +VGY IRFE ++ T +K+MTDG++LRE+
Sbjct: 410 IGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQ 468
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----------LKLLISSATLDA 166
D L YS ++VDEAHER+++TDIL+G+ +++LR++ LKL+I SATL
Sbjct: 469 DLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRI 528
Query: 167 EKFSAYFN-FA---PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILV 222
E + N FA P+L V GR+YPV +H+ + +Y++ A H G +LV
Sbjct: 529 EDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGMLV 588
Query: 223 FLTGQ 227
FLTGQ
Sbjct: 589 FLTGQ 593
Score = 83 (34.3 bits), Expect = 8.2e-96, Sum P(5) = 8.2e-96
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 469 KKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQL 528
++F A N F D D I +L V + ++ +++WC +F++F+ +K A+ +R Q+
Sbjct: 921 RQFNAVNKNFCFLD-DKSDAIKMLQVLGEFA-HEPTEKWCESHFVRFKVLKEAQKLRQQI 978
Query: 529 TCLVE 533
L++
Sbjct: 979 VQLLK 983
Score = 40 (19.1 bits), Expect = 8.2e-96, Sum P(5) = 8.2e-96
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 579 VHVHPSSGLAQVPKR----WVIYHEL 600
V++HPSS LA + ++IY+ L
Sbjct: 1066 VYIHPSSPLAHLSTSECPDYIIYNYL 1091
Score = 37 (18.1 bits), Expect = 8.2e-96, Sum P(5) = 8.2e-96
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 632 VEDLRKKMPRVAGRPWL 648
V+ L++K RVAG+ W+
Sbjct: 1169 VQKLKQK--RVAGKGWV 1183
Score = 37 (18.1 bits), Expect = 4.8e-54, Sum P(5) = 4.8e-54
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 3 QKERKTLPIYHYREQVLRAVQENQVVVIVGETGSG 37
Q++RK L R R +E Q V ET G
Sbjct: 8 QRKRKVLD--RERAAAARQFEEGQDAVDAAETPEG 40
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
Identities = 211/650 (32%), Positives = 354/650 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + ++ +NQVVV+ G++ GK++Q+PQ+ E + + +HG V
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 114
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 115 CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HER+L+TD+LLG+ KD++ R +LKL+++ + L K S+Y+ P+
Sbjct: 175 FLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPV 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
+ V + +PVE+ Y + + ++ I EIH + GD++VFL +
Sbjct: 235 IEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVC 293
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGA-------RKVVLATNIAETSLT 291
L +G+L+V P+Y P E + +F P + R+VVL T+ E+ +
Sbjct: 294 QEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIW 349
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+K+V+D G + + YNP+ SL++ PIS++ A R G + GK F LYT
Sbjct: 350 SHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 409
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL 411
+DM E+Q NL +++L +K + I L DF++ P AL
Sbjct: 410 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ + + P +
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 529
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE------NDYS-KQWCYDNFIQFRSMKHARDI 524
A F + GDH L+NVYN++++ N++ + WC+D F+ +++ A I
Sbjct: 530 AAVTCWKTFLHPE-GDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVI 588
Query: 525 RDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +++R+ + S N +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 589 RAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 648
Query: 580 HVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
+HP S + K WV++H+ ++ Y+R + + PE ++ P YY
Sbjct: 649 QLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 482 (174.7 bits), Expect = 1.7e-93, Sum P(4) = 1.7e-93
Identities = 109/247 (44%), Positives = 145/247 (58%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH------G 55
+QK R LP++ +++ A+ N VV+I GETGSGKTTQ+PQ+L+EAG+ G
Sbjct: 384 IQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPG 443
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
VG TQP E+G GH+VGY IRF+ E T +K+MTDG++LREM+
Sbjct: 444 MVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM 502
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDL-----------KLLISSATL 164
D KL YS +++DEAHER ++TDIL+G+ VRLR+ L KL+I SATL
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL 562
Query: 165 DAEKFS---AYFNFAP-ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDI 220
FS F AP +L+V R++PV IH+ + NY D A T +IH G I
Sbjct: 563 RVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAI 622
Query: 221 LVFLTGQ 227
LVFLTGQ
Sbjct: 623 LVFLTGQ 629
Score = 448 (162.8 bits), Expect = 1.7e-93, Sum P(4) = 1.7e-93
Identities = 90/210 (42%), Positives = 135/210 (64%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ LPT+ Q ++F P G+R ++ATN+AETSLTI G++YVVDSG SK + YN
Sbjct: 729 LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYN 788
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
G++S V +SKASA QR+GR+GRTGPG C+RLY+ ++ D E + PEI R +
Sbjct: 789 ESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVE 848
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLD 430
+++L +K++ I +++NF F P + GAL+ +T+ G++M+ FPL
Sbjct: 849 SIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLS 908
Query: 431 PMLSKMIVASDKFKCSNEIITIAALLSVGN 460
P SKM++ SD+ C I+ I + LSVG+
Sbjct: 909 PRFSKMLLVSDEKACLPYIVAIVSALSVGD 938
Score = 52 (23.4 bits), Expect = 1.7e-93, Sum P(4) = 1.7e-93
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 579 VHVHPSS---GLAQVPKRWVIYHELVL--TTKEYMRQVTELKPEWLFEIA 623
V++HP+S L ++P ++++Y+ L L K M + ++ L IA
Sbjct: 1133 VYIHPTSILNNLGEMPPKYMLYYSLHLGGNNKTRMNTLCDIASTPLANIA 1182
Score = 49 (22.3 bits), Expect = 7.8e-50, Sum P(3) = 7.8e-50
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 434 SKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALL 492
SK + +F ++ + LLSV +++ Y PK +K + + NF +G + I L
Sbjct: 985 SKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEIF--MKKNFLRGKLMEEIVKL 1041
Score = 39 (18.8 bits), Expect = 1.7e-93, Sum P(4) = 1.7e-93
Identities = 16/66 (24%), Positives = 33/66 (50%)
Query: 511 NFIQFRSMKHARDIRDQLTCLV------ERVGI-----ELTS---SLCNLEAMKKAIISG 556
NF++ + M+ +R QL ++ E + + +L S S+ ++ +K+ I +G
Sbjct: 1028 NFLRGKLMEEIVKLRKQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLLKQMICAG 1087
Query: 557 FLLHTA 562
F+ H A
Sbjct: 1088 FVDHVA 1093
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 212/650 (32%), Positives = 353/650 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT---KHGKVG 58
L KER+ LPI+ + + + ++Q+V++ G+ GK++Q+PQ+ E + +HG V
Sbjct: 55 LLKEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVV 114
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 115 CTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HER+++TD+LLG+ KD++ R +LKL+I+S+ K S+Y+ P+
Sbjct: 175 FLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYGNVPL 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
++V + +PVE Y + ++ + EIH + GDI+VFL +
Sbjct: 235 IQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLACEQDIEKAYEIVC 293
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPT-------PDGARKVVLATNIAETSLT 291
L +GEL+V P+Y P E + +F P P R+VVL + E+ +
Sbjct: 294 QEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCPVYQRRVVLTASSGESLIC 349
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+ +K+V+D G + K YNP+ +SL+ PIS++ A R + GK F LY+
Sbjct: 350 SNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLYSEEF 409
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL 411
DM+ E+Q NL +++L +K + I L + DF++ P AL
Sbjct: 410 ASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ N + P+ +
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPRGAEE 529
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE---NDYSK----QWCYDNFIQFRSMKHARDI 524
A + F D GDH L+N+Y ++++ N S+ +WC+D F+ +++ A I
Sbjct: 530 AALSCWKTFLHPD-GDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVI 588
Query: 525 RDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +++R+ + T S N +KKA++SG+ + AR + G+Y + H Q
Sbjct: 589 RAELLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQVA 648
Query: 580 HVHPSS--GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
+HP S +A+ WV++H+ + Y+R +E+ PE ++AP YY
Sbjct: 649 QLHPLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYY 698
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 653 (234.9 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 159/462 (34%), Positives = 246/462 (53%)
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQXXXXXXXXXX 237
L++ GR++PVEI ++ P D + T +IH + GDILVFL GQ
Sbjct: 340 LKIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLI 399
Query: 238 XXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKY 297
L + + ++ P++ L E Q F P RKVVLATNIAETS+T+ G++Y
Sbjct: 400 EEYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRY 459
Query: 298 VVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDME 357
V+D+G SKMK Y G+ESLLV ISK+SA+QRAGR+GR PGKC+RLYT + Y+E M
Sbjct: 460 VIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYKE-MR 518
Query: 358 DNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGEL 417
D +PEI R N+ LI+ G+DDLL F +D+P GA++ G +
Sbjct: 519 DADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAI 578
Query: 418 TKVGRQMAEFPLDPMLSKMIVA--SDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD- 474
T++G++MA P+ L ++++A S + C E+I I + +S G+ +F++ ++++ +
Sbjct: 579 TELGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEV 638
Query: 475 ---NARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLT-- 529
+ +GD ++ + +Y + EN +WC I R+M+ A +IR QL
Sbjct: 639 EEYRRELRRREGDLMVYLTTMQMYTA--ENSDRTEWCKKRKINLRTMRQALNIRRQLRSL 696
Query: 530 CLVERVGIE---------LTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVH 580
C+ E + E + S E + K + GF TA L + SY T + V
Sbjct: 697 CVSEGMLTEKPPPDPQPFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVA 756
Query: 581 VHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEI 622
+HPSS L K +++ E V T K Y ++V ++ W+ E+
Sbjct: 757 IHPSSSLHGQKKEAIMFLEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 177 (67.4 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 86 VGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIF 145
VGYS+RF+ + T +K++T+GM+L+E+L DP L YS ++VDE HER + D+L G
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFL 284
Query: 146 KDLVRLRSD--------LKLLISSATLDAEKFSAYFN 174
K ++ L D LK++ SAT + E +F+
Sbjct: 285 KQML-LSPDKPGRGGLPLKVVAMSATANIETLENFFS 320
Score = 125 (49.1 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQP 62
RK LPI+ ++ + +++N V+++VGETGSGK+TQ+PQ+L + + + +V T P
Sbjct: 114 RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVIMTLP 170
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 210/650 (32%), Positives = 352/650 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + + +NQ+V++ G+ GK++Q+PQ+ E + + +HG V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVV 114
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ EM V +GHEVGY I FE+C S +T+L+Y TD M+ REM+S P
Sbjct: 115 CTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L +Y V+++D+ HER+++TD+LLG+ KD++ R +LKL+I+S+ K S+Y+ P+
Sbjct: 175 FLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPL 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
+ V +++PVE+ Y + +++ + EIH + GDI+VFL +
Sbjct: 235 IEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEKAYEIVC 293
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGA-------RKVVLATNIAETSLT 291
L +GEL+V P+Y P E + +F P + R+VVL + E+ +
Sbjct: 294 QEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCQVYQRRVVLTASSGESLIW 349
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+ +++V+D G + K YNP+ SL+ PIS++ A R G + GK F LY+
Sbjct: 350 SNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLYSEEF 409
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL 411
+DM E+Q NL +++L +K + I L + DF++ P AL
Sbjct: 410 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C E++TIAA+++ N P +
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPHGAEE 529
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE------NDYS-KQWCYDNFIQFRSMKHARDI 524
A F + GDH L+N+Y ++++ +D+ ++WC+D F+ +++ A I
Sbjct: 530 AALTCWKTFLHPE-GDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVI 588
Query: 525 RDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +V+R+ + S N +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 589 RAELLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 648
Query: 580 HVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
+HP S + K WV++H+ ++ Y+R +E+ PE ++AP YY
Sbjct: 649 QLHPLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYY 698
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 206/650 (31%), Positives = 352/650 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + ++ +NQVV++ G++ GK++Q+PQ+ E + + +HG V
Sbjct: 62 LLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 121
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 122 CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNP 181
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HER+L+TD+LLG+ KD++ R +LKL+I+ + + S+Y+ P+
Sbjct: 182 FLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYGNVPL 241
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
L V + +PVE+ Y + + ++ + EIH + GD++VFL +
Sbjct: 242 LEVRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVC 300
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPD-------GARKVVLATNIAETSLT 291
L +GEL+V P+Y P E + +F P + R+VVL T+ E+ +
Sbjct: 301 QEGSNLNPDVGELVVIPLY---PKE-KCSLFRPVDETEKRCQASQRRVVLTTSCGESLIW 356
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+++V+D G + + YNP+ SL++ PIS++ A R G + GK F LYT
Sbjct: 357 SHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 416
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL 411
+DM E+Q NL +++L +K + I L DF++ P AL
Sbjct: 417 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 476
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ + + P +
Sbjct: 477 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 536
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE------NDYSKQ-WCYDNFIQFRSMKHARDI 524
A F + GDH L+N+YN++++ N++ + WC++ F+ +++ A I
Sbjct: 537 AAVTCWKTFLHPE-GDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVI 595
Query: 525 RDQLTCLVERVGIELTSSLCNLEA----MKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +++R+ + + +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 596 RAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 655
Query: 580 HVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
+HP S A K WV++H+ ++ Y+R + + PE ++ P YY
Sbjct: 656 QLHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYY 705
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 893 (319.4 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 198/552 (35%), Positives = 308/552 (55%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L++E+K+LPI+ YR++++ V+ + VVV+ G+TG GK+TQ+PQYL +G + CTQ
Sbjct: 155 LRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINN---IACTQ 211
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE + T L ++T+G++LR++ D L
Sbjct: 212 PRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDASLG 271
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ LR DL+L++ SAT++ + FS+YFN AP+L+V
Sbjct: 272 QYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVLQV 331
Query: 182 PGRRYPVEIHYTKAPESNYIDAA----------IVTTLEIHATQAS-GDILVFLTGQXXX 230
PGR +P+++ Y P + + ++ ++ Q GD+L+FL+G
Sbjct: 332 PGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDLLLFLSGVAEI 391
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ T IV P+++ L Q K+F P G RK +++TNIAETS+
Sbjct: 392 STIQEA----CQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSV 447
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDG+++VVDSG K ++PK M+ L + IS+AS+ QR GR+GRTGPG C+RLY+ +
Sbjct: 448 TIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSES 507
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI R L ++IL +K++G+ D F F+D PP GA
Sbjct: 508 DY-DAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYLREQGA 566
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L++ GELT +GR +A+ P+D ++ KM+V F ++T+AA LSV S F R
Sbjct: 567 LDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSV-QSPFLRSAQHN 625
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSWKE-----NDYSKQWCYDNFIQFRSMKHARDIR 525
AR + GD L+N +N+W + S++WC ++ + + ++R
Sbjct: 626 PDCSTARQPL-NSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMVNLR 684
Query: 526 DQLTCLVERVGI 537
Q L+ G+
Sbjct: 685 RQFKELLRSHGL 696
Score = 42 (19.8 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 560 HTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
H A + + + ++ Q V +HP+S A P+
Sbjct: 827 HNATRKDSDQVFHTRNKQGVVIHPTSVFASDPE 859
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 209/650 (32%), Positives = 353/650 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + + +NQ+V++ G+ GK+ Q+PQ+ E + + +HG V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI 114
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 115 CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HER+++TD+LLG+ KD++ R +LKL+I+S+ K ++Y+ P+
Sbjct: 175 FLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPV 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
+ V + +PVE+ Y + + ++ + EIH + GDI+VFL +
Sbjct: 235 IEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVY 293
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGA-------RKVVLATNIAETSLT 291
L +GEL+V P+Y P E + +F P + R+VVL T+ E +
Sbjct: 294 QG-SNLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIW 348
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+ +++V+D G + K YNP+ SL++ PIS++ A R G + GK F LYT
Sbjct: 349 SNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEF 408
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL 411
+DM E+Q NL +++L +K + I L + DF++ P AL
Sbjct: 409 ASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAAL 468
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ N + P +
Sbjct: 469 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEE 528
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE------NDYS-KQWCYDNFIQFRSMKHARDI 524
A F + GDH L+++Y ++++ ++Y ++WC D F+ +++ A I
Sbjct: 529 AALTCWKTFLHPE-GDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVI 587
Query: 525 RDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +++R+ + S N +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 588 RAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 647
Query: 580 HVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
+HP SG + K WV++H+ ++ Y+R +E+ PE ++ P YY
Sbjct: 648 QLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 178/382 (46%), Positives = 255/382 (66%)
Query: 265 QAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPIS 324
QAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY K+K +NP+ GM++L +YPIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 325 KASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDL 384
+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPEIQRTNLANV+L+LK+LG+ DL
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 385 LNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFK 444
L F F+D PP+ GAL+ G LT GR M EFPLDP LSKM++ S
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMG 278
Query: 445 CSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYS 504
CS+EI+ I ++LSV ++FYRPK ++ +D R F ++ DH+ LNVY WK N+YS
Sbjct: 279 CSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPES-DHLTYLNVYLQWKNNNYS 336
Query: 505 KQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARL 564
WC D+FI ++M+ R++R QL ++ + + L S + + ++K I + + A+L
Sbjct: 337 TIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKL 396
Query: 565 QKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFE 621
+ G Y ++ H+HP+S G+ P +++YHELV+TTKEYM+ VT + EWL E
Sbjct: 397 KGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHELVMTTKEYMQCVTAVDGEWLAE 455
Query: 622 IAPHYYMLKDVEDLRKKMPRVA 643
+ P +Y +K R++ R A
Sbjct: 456 LGPMFYSVKQAGKSRQENRRRA 477
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 794 (284.6 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 186/508 (36%), Positives = 272/508 (53%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXX 65
R LPI +Q++ + + ++++GETGSGK+TQ+PQ AG G + TQP
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 66 XXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSV 125
EMG +G VGY +RFE+ T KT ++YMTDG+VLR+ L P L+ YS
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 126 LMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSAYFNFAPILRV 181
+++DEAHER+L +D+L+ I + R + L+L+I SATL AEKF +YFN A ++ V
Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLV 337
Query: 182 PGRRYPVEIHYTKAPESN-------YIDAAIVTTLEIHATQASG-DILVFLTGQXXXXXX 233
GR +P+E+ + P+ N Y+ A++ +H T+ G DILVFLTG
Sbjct: 338 AGRTFPIEVFHVN-PKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAV 396
Query: 234 XXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
L L+ P+YA L E Q + F TP GARKV+++TNIAETS+TI
Sbjct: 397 ASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIP 456
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
GI+ V+DSG K K + ++ L V+ +SKA A QRAGR+GR PGKC+RLY+ +
Sbjct: 457 GIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFH 516
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQ 413
+ E +PEI R NL+ L L LG+ + +D P GA+
Sbjct: 517 K-FEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRP 575
Query: 414 VGE------LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK 467
V LT++G +PL P ++++ + K C E I I A + +++F
Sbjct: 576 VNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQT-DALFSGAG 634
Query: 468 NKKFLADNARMNF-YQGDAGDHIALLNV 494
+ K AD R+ ++ GDHI LL +
Sbjct: 635 DSKSDADVDRIRRRFETREGDHITLLKL 662
Score = 128 (50.1 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 52/176 (29%), Positives = 87/176 (49%)
Query: 450 ITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCY 509
IT+ L+ V N F+ NKK +D AR Y G A +L YN +++C
Sbjct: 657 ITLLKLVLVTNQ-FFDQLNKKTESD-AR---Y-GKANK--SLEREYNQT-----IRKFCN 703
Query: 510 DNFIQFRSMKHARDIRDQLTCLVERVGIE--LTSSLCNLEAMK--KAIISGFLLHTARLQ 565
DN I + +K A I +QL +++ IE +T S C + MK KA+ G L++
Sbjct: 704 DNMINEQHLKTASMIEEQL----KQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCEYD 759
Query: 566 KNGS-YWTVKHPQ-KVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
+ Y + +P + +HPSS L++ ++++ EL+ T + QVT + +W+
Sbjct: 760 RQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWV 815
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 208/651 (31%), Positives = 352/651 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + + ++QVV++ G+ GK++Q+PQ+ E + + +HG V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVV 114
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 115 CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ ER+++TD+LLG+ KD++ R +LKL+I+S+ S+Y+ P+
Sbjct: 175 FLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYGNVPL 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
+ V +R PVE+ Y + ++A + EIH + GDI+VFL +
Sbjct: 235 IEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLACEQDIEKAYEIVC 293
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGA-------RKVVLATNIAETSLT 291
L +GEL+V P+Y P E + +F P + R+VVL + E+ +
Sbjct: 294 QEGTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQRRVVLTASSGESLIW 349
Query: 292 IDGIKYVVDSGYSKMKW-YNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
+ +++V+D G + K Y+P+ +SL++ PIS++ A R G + GK F LY+
Sbjct: 350 SNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFCLYSEE 409
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
+DM E+Q NL +++L +K + I L + DF++ P A
Sbjct: 410 FASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAA 469
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ N + P +
Sbjct: 470 LDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPSGAE 529
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSWKE---NDYSK----QWCYDNFIQFRSMKHARD 523
A F + GDH L+N+Y ++++ N S+ +WC+D F+ +++ A
Sbjct: 530 AEALTCWKTFLHPE-GDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADV 588
Query: 524 IRDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQK 578
IR +L +++R+ + S N +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 589 IRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 648
Query: 579 VHVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
+HP S + K WV++H+ ++ Y+R +E+ PE ++ P YY
Sbjct: 649 AQLHPLSCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYY 699
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 166/278 (59%), Positives = 214/278 (76%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ +QV++I GETGSGKTTQIPQYL E GYT G K+ CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP EMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 511
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SAT+D +FS +F+ AP+ R
Sbjct: 512 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 571
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQ R
Sbjct: 572 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARK 278
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARK
Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 212/633 (33%), Positives = 344/633 (54%)
Query: 7 KTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXX 66
K LP+Y ++++L A+ + V+V+ TGSGKTTQ+P LHEAGY + G +G TQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 67 XXXXXXXXXXE-MGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSV 125
+ + V+ G VGY +RFED T +T +K MTDG++L+EM DP L YS+
Sbjct: 65 VLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSI 123
Query: 126 LMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRR 185
+MVDEAHER+L+ D +LG+ K +++ R D +++ISSAT++ FS YFN P++++
Sbjct: 124 IMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVA 183
Query: 186 YPVEIHY----------TKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXX 235
YPV + + TK E+ ++ + + A++ G IL+FL G+
Sbjct: 184 YPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNC-- 241
Query: 236 XXXXRIRKLGTK--IGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
I +L + +L + P+Y L E Q ++F P G RKVV+ATNIAETS+TID
Sbjct: 242 -----ITRLSHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITID 296
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
+ V+DSG K+ YNP + SL PIS+AS QR GR+GR G C+RLY+ + +
Sbjct: 297 DVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDF- 355
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQ 413
E E T+ EI RT+L+ V++ + LGI D +FDF+ P GAL
Sbjct: 356 EQREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALED 415
Query: 414 VGELTKVGRQMAEFPLDPMLSKMIV-ASDKFKCS-NEIITIAALLSVGNSVFYRPKNKKF 471
L+++G+ M FPL P S+MIV A ++ S ++++ AA LS + + + ++++
Sbjct: 416 DRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFS-EDQEE 474
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCL 531
A F GD ++ L +Y ++ + + +C ++ R M +I++QL +
Sbjct: 475 KTKKAHGTF-SDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELI 533
Query: 532 VERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVP 591
V +G L + +E + +G + + SY ++ + +H+HP S + +
Sbjct: 534 VSGMGFPLLTG-GTVEEYLICVGTGMIQFVCVQEHRDSYRSLT-AECIHIHPGSCVYKDR 591
Query: 592 KRWVIYHELVLTTKEYMRQVTELKPEWLFEIAP 624
++++ E+V T++ Y V+ L + IAP
Sbjct: 592 PKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAP 624
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 459 (166.6 bits), Expect = 5.1e-89, Sum P(3) = 5.1e-89
Identities = 103/237 (43%), Positives = 144/237 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-HGKVGCT 60
+Q+ R LPI + ++ A+ EN +VVI GETGSGKTTQ+PQ+L+EAGYT +G +G T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEV-GYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
+P EM L H V Y IR+E T+++T +K+MTDG++L+E+ D
Sbjct: 295 EPRRVAAVSMSQRVAKEMN--LSHRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFL 352
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSAYFN- 174
L Y V+++DEAHER++ TDIL+G+ +V LR LKL+I SATL E F+
Sbjct: 353 LSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRL 412
Query: 175 FA---PILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
FA P+L+V R++PV +H+ K P +Y +IH SG ILVFLTGQ
Sbjct: 413 FAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQ 469
Score = 380 (138.8 bits), Expect = 5.1e-89, Sum P(3) = 5.1e-89
Identities = 93/223 (41%), Positives = 126/223 (56%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QAK+F P P G R V+ATN+AETSLTI GIKYVVD G K ++Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V IS+ASA QRAGR+GRT PG C+RLY+ + D E + PEI + +
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DFEKFSAPEITKRPVE 695
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQ---VGELTK-------- 419
++IL +K L I+ ++NF F PP GAL + G L +
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 420 ----VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
+GR MA FP+ P +KM+ S + C ITI + ++V
Sbjct: 756 PISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTV 798
Score = 116 (45.9 bits), Expect = 5.1e-89, Sum P(3) = 5.1e-89
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 566 KNGSYWTVKHPQKVHVHPSSGL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAP 624
KN +Y T V +HPSS L Q+P+ +V+Y E+V TTK YM+ V+ ++PEW+ + P
Sbjct: 941 KN-AYKTALLDDPVFIHPSSVLFKQLPE-FVVYQEIVETTKLYMKGVSAVEPEWIPALLP 998
Query: 625 HY 626
Y
Sbjct: 999 PY 1000
Score = 107 (42.7 bits), Expect = 2.2e-60, Sum P(3) = 2.2e-60
Identities = 38/135 (28%), Positives = 64/135 (47%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGN--SVFYRP-------- 466
++ +GR MA FP+ P +KM+ S + C ITI + ++V F RP
Sbjct: 757 ISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELFEEFDRPAASEEETV 816
Query: 467 --KNKKF-LADNARMNFYQGDA---GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
K KK L R+ QG GD + +L + + + + ++C +N +++++M
Sbjct: 817 KLKGKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLE 876
Query: 521 ARDIRDQLTCLVERV 535
R +R QLT V V
Sbjct: 877 IRRLRGQLTTAVNSV 891
Score = 42 (19.8 bits), Expect = 2.8e-39, Sum P(3) = 2.8e-39
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 120 LESYSVLMVDEAHE-RTLSTD 139
L++Y+V+ VDE E R TD
Sbjct: 528 LDNYAVVPVDEGDEDRDAETD 548
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN 386
+ + SYQ E NT E Q + + +L LK + D LL+
Sbjct: 316 HRVVSYQIRYEGNTTDETQIKFMTDGVL-LKEVQKDFLLS 354
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 203/552 (36%), Positives = 303/552 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI YR+++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ H V CTQ
Sbjct: 155 LQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-H--VACTQ 211
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE S T + ++T G++LR + +P L
Sbjct: 212 PRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLP 271
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FSAYF AP+++V
Sbjct: 272 QYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQV 331
Query: 182 PGRRYPVEIHYTKA---PESNYIDAA----IVTTLEI----HATQASGDILVFLTGQXXX 230
PGR +P+ + Y P ++ ++ + LE + + GD+LVFL+G
Sbjct: 332 PGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEI 391
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
R+ G +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 392 GAVLEAAQAHARRSG----RWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ ++ L + IS+ASA QR GR+GRTGPG CFRLY +
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI+R L ++L +K++ + D F F++ PP GA
Sbjct: 508 DY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRDQGA 566
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM+V + ++TIAA LSV S F R
Sbjct: 567 LDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSV-QSPFTRSTRSN 625
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSWKE-----NDYSKQWCYDNFIQFRSMKHARDIR 525
+ D GD L NV+N+W + + S++WC I+ + ++R
Sbjct: 626 ---PKCAWRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMANLR 682
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 683 RQFKELLEDHGL 694
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 201/552 (36%), Positives = 305/552 (55%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ H V CTQ
Sbjct: 157 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-H--VACTQ 213
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE S T + ++T G++LR++ +P L
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF+ AP+++V
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 182 PGRRYPVEIHYTK------APESNYIDAA-IVTTLEI----HATQASGDILVFLTGQXXX 230
PGR +P+ + Y A +S +D + LE + + GD+LVFL+G
Sbjct: 334 PGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 393
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ + +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 394 TTVLDAA----QAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSV 449
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ ++ L + IS+ASA QR GR+GRTGPG C+RLY +
Sbjct: 450 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAES 509
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI+R L ++L +K++ + D F F++ PP GA
Sbjct: 510 DY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGA 568
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F + ++TIAA LSV S F R
Sbjct: 569 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV-QSPFTRSAQSN 627
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
AR + D GD L NV+N+W + + S++WC ++ + ++R
Sbjct: 628 LDCATARRPL-ESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLR 686
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 687 RQFKELLEDHGL 698
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 202/552 (36%), Positives = 303/552 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ H V CTQ
Sbjct: 159 LQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-H--VACTQ 215
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE + T + ++T G++LR++ +P L
Sbjct: 216 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 275
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF AP+++V
Sbjct: 276 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 335
Query: 182 PGRRYPVEIHYTK------APESNYIDAA-IVTTLEI----HATQASGDILVFLTGQXXX 230
PGR +P+ + Y A +S +D + LE + + GD+LVFL+G
Sbjct: 336 PGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 395
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ ++ +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 396 SSVLEAA----QTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 451
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ + L + IS+ASA QR GR+GRTGPG CFRLY +
Sbjct: 452 TIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 511
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI+R L ++L +K++ + D F F++ PP GA
Sbjct: 512 DY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQGA 570
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F + ++TIAA LSV S F R
Sbjct: 571 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QSPFTRSAQSN 629
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
AR + D GD L NV+N+W + + S++WC I+ + ++R
Sbjct: 630 PECAAARRPL-ESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLR 688
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 689 RQFKELLEDHGL 700
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 202/552 (36%), Positives = 303/552 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ H V CTQ
Sbjct: 154 LQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-H--VACTQ 210
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE + T + ++T G++LR++ +P L
Sbjct: 211 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 270
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF AP+++V
Sbjct: 271 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 330
Query: 182 PGRRYPVEIHYTK------APESNYIDAA-IVTTLEI----HATQASGDILVFLTGQXXX 230
PGR +P+ + Y A +S +D + LE + + GD+LVFL+G
Sbjct: 331 PGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 390
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ ++ +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 391 SSVLEAA----QTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 446
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ + L + IS+ASA QR GR+GRTGPG CFRLY +
Sbjct: 447 TIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 506
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI+R L ++L +K++ + D F F++ PP GA
Sbjct: 507 DY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQGA 565
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F + ++TIAA LSV S F R
Sbjct: 566 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QSPFTRSAQSN 624
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
AR + D GD L NV+N+W + + S++WC I+ + ++R
Sbjct: 625 PECAAARRPL-ESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLR 683
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 684 RQFKELLEDHGL 695
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 455 (165.2 bits), Expect = 1.8e-87, Sum P(3) = 1.8e-87
Identities = 95/236 (40%), Positives = 147/236 (62%)
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
+++G L V P+Y+ LPT+ Q K+F P G+R ++ATN+AETSLTI GI+YVVD G SK
Sbjct: 766 SEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSK 825
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+ YN + G++S V +SKASA QRAGR+GRTGPG C+RLY+ +++ +VPEI
Sbjct: 826 ERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEIL 885
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN-QVGELTKVGRQM 424
R +++L +K++GID + NF F P + GAL+ + ++T +G++M
Sbjct: 886 RMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQKQITDLGKKM 945
Query: 425 AEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
+ FPL P +K+++ ++ +C + II I + LSVG+ + + D AR F
Sbjct: 946 SLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREF 1001
Score = 448 (162.8 bits), Expect = 1.8e-87, Sum P(3) = 1.8e-87
Identities = 102/252 (40%), Positives = 145/252 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK--H----G 55
+Q++R LP++ +++ AV + +++ GETGSGKTTQ+PQ+L+EAG+ H G
Sbjct: 436 IQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPG 495
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEK-----TVLKYMTDGMV 110
+G TQP E+G GH VGY IRF+ + T LK+MTDG++
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVL 554
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLR-----------SDLKLLI 159
LREM++D L YS +++DEAHER ++TDIL+G+ +V+LR LKL+I
Sbjct: 555 LREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLII 614
Query: 160 SSATLDAEKFS---AYFNFAP-ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQ 215
SATL FS A F P I+ V R+YPV IH+ K +Y++ A T +IH
Sbjct: 615 MSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKL 674
Query: 216 ASGDILVFLTGQ 227
G IL+FLTGQ
Sbjct: 675 PEGGILIFLTGQ 686
Score = 49 (22.3 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 21/83 (25%), Positives = 41/83 (49%)
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
I+KL ++G ++ + + +L+ K+ +P P+ +K V A S ID + D
Sbjct: 1056 IQKLRKQVGNIVENMIMSADGLQLEQKVKLPIPN--KKQVSAMKQMIASGFIDQVAIRGD 1113
Query: 301 SGYSKMKWYNPKTGMESLLVYPI 323
S++K N KT + ++ P+
Sbjct: 1114 LISSEVKVAN-KTSIINIPYCPV 1135
Score = 40 (19.1 bits), Expect = 1.8e-87, Sum P(3) = 1.8e-87
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 511 NFIQFRSMKHARDIRDQLTCLVERV-----GIELTSSLC-------NLEAMKKAIISGFL 558
++++ + M+ + +R Q+ +VE + G++L + + AMK+ I SGF+
Sbjct: 1046 HYLRHKMMEEIQKLRKQVGNIVENMIMSADGLQLEQKVKLPIPNKKQVSAMKQMIASGFI 1105
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 203/552 (36%), Positives = 305/552 (55%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ H V CTQ
Sbjct: 155 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-H--VACTQ 211
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE S T + ++T G++LR++ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF+ AP+++V
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 182 PGRRYPVEIHYTKA---P---ESNYIDAA-IVTTLEI----HATQASGDILVFLTGQXXX 230
PGR +P+ + Y P +S +D + LE + + GD+LVFL+G
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEI 391
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ + +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 392 SAVLEAA----QTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ ++ L + IS+ASA QR GR+GRTGPG CFRLY +
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI+R L +++L +K++ + D F F++ PP GA
Sbjct: 508 DY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGA 566
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F ++TIAA LSV S F R
Sbjct: 567 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV-QSPFTRSAQSS 625
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
AR + D GD L NV+N+W + + S++WC I+ + ++R
Sbjct: 626 PECAAARRPL-ESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLR 684
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 685 RQFKELLEDHGL 696
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 202/552 (36%), Positives = 301/552 (54%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI Y +L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG + H V CTQ
Sbjct: 155 LQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCS-H--VACTQ 211
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE S T + ++T G++LR+M +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSLP 271
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF AP+++V
Sbjct: 272 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNAPVVQV 331
Query: 182 PGRRYPVEIHYTKA---P---ESNYIDAA-IVTTLEI----HATQASGDILVFLTGQXXX 230
PGR +P+ + Y P +S +D + LE + + GD+LVFL+G
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 391
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ + +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 392 SAVLEPA----QAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ ++ L + IS+ASA QR GR+GRTGPG CFRLY +
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
Y + VPEI+R L ++L +K++ + D F F++ PP GA
Sbjct: 508 DY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETAILYLRDQGA 566
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F + ++TIAA LSV ++
Sbjct: 567 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQTPFTRSAQSNP 626
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
A R + D GD LLNV+N+W + S++WC I+ + ++R
Sbjct: 627 ECAATRRP--LESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMANLR 684
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 685 RQFKELLEDHGL 696
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 514 (186.0 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 148/435 (34%), Positives = 219/435 (50%)
Query: 201 IDAAIV-TTLE-IHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYA 258
ID +V T+E I + G ILVFLTG LG + +V P++
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMN-NFLGDS-SKFLVLPLHG 542
Query: 259 NLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESL 318
++PT Q +IF P RK+VLATNIAE+S+TID + YVVD G +K Y+ + L
Sbjct: 543 SMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACL 602
Query: 319 LVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKN 378
L ISKASA QR GR+GR G C+RLY Y + +PEI RT L + L +K+
Sbjct: 603 LPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY-DAFPQYQLPEIIRTPLQELCLHIKS 661
Query: 379 LGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKM 436
L + + +F L P GALN V ELT +GR + P+DP + KM
Sbjct: 662 LQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKM 721
Query: 437 IVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDA-GDHIALLNVY 495
++ F+C N +TIAA L+ S F P N+K AD A+ ++ GD+ DHIALL Y
Sbjct: 722 LLIGAIFQCVNPALTIAAALAY-RSPFVLPLNRKEEADEAK-RYFAGDSCSDHIALLKAY 779
Query: 496 NSW---KENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS-------LCN 545
+ K K +C+ NF+ +++ D+R+Q L+ +G S +
Sbjct: 780 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYD 839
Query: 546 LEAMKKAIISGFLLHTARLQKNG---SYWTVKHPQKVHVHPSSGLAQV---PKRWVIYHE 599
+E + + +G + + ++ G +++T K KV +HP S A+V +++Y E
Sbjct: 840 MEMISAVLCAGLYPNVVQCKRRGKRTAFYT-KELGKVDIHPGSVNARVNLFSLPYLVYSE 898
Query: 600 LVLTTKEYMRQVTEL 614
V TT Y+R T +
Sbjct: 899 KVKTTSVYIRDSTNI 913
Score = 382 (139.5 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 78/191 (40%), Positives = 116/191 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-HG---KV 57
L+ R+ LP + +E+ L +V +NQV+V+ GETG GKTTQ+PQ++ E + G +
Sbjct: 221 LKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNI 280
Query: 58 GCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSD 117
CTQP E G +G VGY IR E S++T L + T G++LR ++ D
Sbjct: 281 ICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIED 340
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P L + S L+VDE HER ++ D LL I +DL+ R DL+L++ SAT++A+ FS YF +P
Sbjct: 341 PNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSP 400
Query: 178 ILRVPGRRYPV 188
+ +PG +PV
Sbjct: 401 TMHIPGFTFPV 411
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 443 (161.0 bits), Expect = 9.5e-85, Sum P(3) = 9.5e-85
Identities = 90/213 (42%), Positives = 134/213 (62%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
+ V P+Y+ L TE Q K+F +P+G R ++ATN+AETS+TI I+YVVD G +K + YN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
KT ++ V ISKA+A QRAGR+GRTGPG C+RLY+ + +++PEI RT +
Sbjct: 762 EKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVE 821
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLD 430
+++L +KN+ ID++ NF F SP + GA++ G LTK+G QM+ FPL
Sbjct: 822 SIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLS 881
Query: 431 PMLSKMIVASDKFKCSNEIITIAALLSVGNSVF 463
P SKM++ + C +I + + LS+ N +F
Sbjct: 882 PRFSKMLIIGQQHGCLPYVIALVSALSI-NQLF 913
Score = 423 (154.0 bits), Expect = 9.5e-85, Sum P(3) = 9.5e-85
Identities = 99/245 (40%), Positives = 141/245 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH-----GK 56
+Q+ R LPI ++++ + N VV+I G TGSGKTTQ+PQ+L EAG++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
+ TQP E+ +V Y IRF+ + T +K+MTDG++LRE+ S
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLR-----SD-----LKLLISSATLDA 166
D L +YS ++VDEAHER+++TDILLG+ +VRLR SD LKL+I SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 167 EKFSA---YFNFAP-ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILV 222
FS F+ P I+++ R+YPV IH+ + + +Y+ A IH +G ILV
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 223 FLTGQ 227
FLTGQ
Sbjct: 630 FLTGQ 634
Score = 78 (32.5 bits), Expect = 9.5e-85, Sum P(3) = 9.5e-85
Identities = 34/182 (18%), Positives = 80/182 (43%)
Query: 464 YRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARD 523
Y+ + + + +R DA ++LL+ ++ +++C +N+++ ++++ +
Sbjct: 947 YKNRMRGYFNAISRFQAIDPDA-PALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTN 1005
Query: 524 IRDQLTCLVERVGIELTSSLCNLE----------AMKKAIISGFLLHTARLQKNGSYWTV 573
+R Q+ L++R + + L+ A+++ I S ++ A K +
Sbjct: 1006 LRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVT 1065
Query: 574 KHP---QKVHVHPSSGLAQVPKRWVIY---HELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
P + V P + +V+Y HE + + YM +TE+ PE L +A +
Sbjct: 1066 LFPSGSEVVQFVPDRTY-NIDSEYVVYLSLHES-RSGRVYMSPLTEISPEHLARLAKNTT 1123
Query: 628 ML 629
+L
Sbjct: 1124 LL 1125
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 414 (150.8 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 91/233 (39%), Positives = 141/233 (60%)
Query: 247 KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKM 306
KI + + +Y++LP + Q IF P P RKV+L+TNIAETS+TI IKYV+DSG K+
Sbjct: 396 KIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI 455
Query: 307 KWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQR 366
K+++ G L V ISK SA+QR+GR+GR PG+ +R+YT Y E+M +PEI R
Sbjct: 456 KYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEY-ENMNPFLIPEIFR 514
Query: 367 TNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAE 426
++L + L LK + I++ L F+F ++P + A++ LT +G+++
Sbjct: 515 SDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCL 574
Query: 427 FPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
FPL+P+ + +++ S +F C +EI TI ALL+ +S+F N F D +N
Sbjct: 575 FPLNPIYANILLCSIEFNCIDEIATIVALLNC-DSIFL---NYNFYEDLDTLN 623
Score = 299 (110.3 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 53/131 (40%), Positives = 93/131 (70%)
Query: 82 LGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDIL 141
+G+ VGY+IRF++ S+KT +K++TDG+++RE+++DP L+ Y L++DE HER++ TD+L
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVL 157
Query: 142 LGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNYI 201
LG K L++ R +K+++ SAT D F+ +FN PI+ +P + + + I+Y + +YI
Sbjct: 158 LGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYI 217
Query: 202 DAAIVTTLEIH 212
+ + T L+IH
Sbjct: 218 LSVVSTILQIH 228
Score = 137 (53.3 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 42/164 (25%), Positives = 82/164 (50%)
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYS--KQWCYDNFIQFRSMKHARDI 524
KNK L + AR D GDH+ LL+++ W+E D K +C + ++ I
Sbjct: 697 KNK--LINVARRKLIHPD-GDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKI 753
Query: 525 RDQLTCLVE-RVGIELTSSLCNLEAMKKAII---SGFLLHTARLQKNGS-YWTVKHPQKV 579
+ QL +++ ++ IE+ L ++ + +I + A+ N + Y + + K+
Sbjct: 754 KIQLLEIMKNKMKIEIPKKL-HMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKI 812
Query: 580 HVHPSSGL--AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFE 621
+HPSS L + + ++ Y ++V T + Y R VT+++ +WL +
Sbjct: 813 RIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLK 856
Score = 121 (47.7 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 7 KTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK 56
+ LPI Y+ ++ + +++N +++I GETG GKTTQ+PQ ++E + K K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 44 (20.5 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 218 GDILVFLTGQ 227
GDILVFL GQ
Sbjct: 317 GDILVFLPGQ 326
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 458 VGNSVFYRPKNKKFLADNARMNF 480
+GN V Y + K +D R+ F
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKF 120
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 414 (150.8 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 91/233 (39%), Positives = 141/233 (60%)
Query: 247 KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKM 306
KI + + +Y++LP + Q IF P P RKV+L+TNIAETS+TI IKYV+DSG K+
Sbjct: 396 KIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI 455
Query: 307 KWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQR 366
K+++ G L V ISK SA+QR+GR+GR PG+ +R+YT Y E+M +PEI R
Sbjct: 456 KYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEY-ENMNPFLIPEIFR 514
Query: 367 TNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAE 426
++L + L LK + I++ L F+F ++P + A++ LT +G+++
Sbjct: 515 SDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCL 574
Query: 427 FPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
FPL+P+ + +++ S +F C +EI TI ALL+ +S+F N F D +N
Sbjct: 575 FPLNPIYANILLCSIEFNCIDEIATIVALLNC-DSIFL---NYNFYEDLDTLN 623
Score = 299 (110.3 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 53/131 (40%), Positives = 93/131 (70%)
Query: 82 LGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDIL 141
+G+ VGY+IRF++ S+KT +K++TDG+++RE+++DP L+ Y L++DE HER++ TD+L
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVL 157
Query: 142 LGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNYI 201
LG K L++ R +K+++ SAT D F+ +FN PI+ +P + + + I+Y + +YI
Sbjct: 158 LGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYI 217
Query: 202 DAAIVTTLEIH 212
+ + T L+IH
Sbjct: 218 LSVVSTILQIH 228
Score = 137 (53.3 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 42/164 (25%), Positives = 82/164 (50%)
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYS--KQWCYDNFIQFRSMKHARDI 524
KNK L + AR D GDH+ LL+++ W+E D K +C + ++ I
Sbjct: 697 KNK--LINVARRKLIHPD-GDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKI 753
Query: 525 RDQLTCLVE-RVGIELTSSLCNLEAMKKAII---SGFLLHTARLQKNGS-YWTVKHPQKV 579
+ QL +++ ++ IE+ L ++ + +I + A+ N + Y + + K+
Sbjct: 754 KIQLLEIMKNKMKIEIPKKL-HMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKI 812
Query: 580 HVHPSSGL--AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFE 621
+HPSS L + + ++ Y ++V T + Y R VT+++ +WL +
Sbjct: 813 RIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLK 856
Score = 121 (47.7 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 7 KTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK 56
+ LPI Y+ ++ + +++N +++I GETG GKTTQ+PQ ++E + K K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 44 (20.5 bits), Expect = 4.0e-84, Sum P(5) = 4.0e-84
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 218 GDILVFLTGQ 227
GDILVFL GQ
Sbjct: 317 GDILVFLPGQ 326
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 458 VGNSVFYRPKNKKFLADNARMNF 480
+GN V Y + K +D R+ F
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKF 120
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 459 (166.6 bits), Expect = 9.2e-84, Sum P(3) = 9.2e-84
Identities = 99/234 (42%), Positives = 141/234 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+Q R LPI +QV+ + EN +V++ GETGSGKTTQ+PQ+L+EAGY +H +G T+
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTE 312
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P EM + EV Y IRFE + T +K+MTDG++L+E+ +D L
Sbjct: 313 PRRVAAIAMSKRVAHEMNLPES-EVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLS 371
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLR----SDLKLLISSATLDAEKFSA---YFN 174
YSV+++DEAHER++ TDIL+G+ +V LR LKL+I SATL F+ F
Sbjct: 372 KYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFK 431
Query: 175 FAP-ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
P +L+V R++PV IH+ K +Y+ A TL+IH G IL+F+TGQ
Sbjct: 432 IPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQ 485
Score = 355 (130.0 bits), Expect = 9.2e-84, Sum P(3) = 9.2e-84
Identities = 83/217 (38%), Positives = 125/217 (57%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L +E Q +IF+P PDG R V++TN+AETSLTI IKYVVD G K + Y+
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ + +V SKASA QRAGR+GR G C+RLY+ Y + ED + P+IQ+ +
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVE 736
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE---------LTKVG 421
+++L ++ +GID +++F F P Q GAL +V + +T++G
Sbjct: 737 DLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGAL-EVAKTENTDLPPAVTRLG 795
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
++ FP+ P KM+ S + + + A LSV
Sbjct: 796 HVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSV 832
Score = 92 (37.4 bits), Expect = 9.2e-84, Sum P(3) = 9.2e-84
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 581 VHPSSGLAQVPKRWVIYHELVL-----TTKEYMRQVTELKPEWLFEIAPHYYMLKDV-ED 634
+H SS L Q WVIY E +TK ++R +T ++PEWL P +++V ED
Sbjct: 991 LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVPLLCNIREVRED 1050
Query: 635 LRKKMPRVAGR 645
+ + +G+
Sbjct: 1051 PAPRFDKTSGK 1061
Score = 55 (24.4 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 29/128 (22%), Positives = 51/128 (39%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVF---------YRPK 467
+T++G ++ FP+ P KM+ S + + + A LSV + P
Sbjct: 791 VTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPG 850
Query: 468 NKKFLADN---ARMNFYQGDAGDHIALLNVYNSWK---ENDYSKQWCYDNFIQFRSMKHA 521
+F A YQ GD + LL + + ++C N ++ ++M
Sbjct: 851 ANRFHRKRQSWAASGNYQL-LGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEV 909
Query: 522 RDIRDQLT 529
R +R QLT
Sbjct: 910 RKLRVQLT 917
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 389 (142.0 bits), Expect = 2.8e-83, Sum P(5) = 2.8e-83
Identities = 84/190 (44%), Positives = 118/190 (62%)
Query: 249 GELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKW 308
G+L V P+YA L Q ++F R VV+ATN+AETSLTI GIKYVVD+G K+K
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKN 704
Query: 309 YNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTN 368
Y+ KTGMES V IS+ASA QRAGR+GRTGPG C+RLY+ + E++++PEI +
Sbjct: 705 YDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVP 764
Query: 369 LANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFP 428
+ VIL++K++ I + NF F P AL+ G LT +G+ M+ +P
Sbjct: 765 VDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYP 824
Query: 429 LDPMLSKMIV 438
+ P S+M++
Sbjct: 825 MSPRHSRMLL 834
Score = 344 (126.2 bits), Expect = 2.8e-83, Sum P(5) = 2.8e-83
Identities = 68/177 (38%), Positives = 113/177 (63%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY------TKHG 55
+++ RK LPI ++++ A+ + V+I G+TG GKTTQ+PQ+L+EAG+ ++ G
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
+G TQP E+GV+LG EVG+ +R++ E + +K+MTDG++LRE+
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDL-----KLLISSATLDAE 167
+D L YSV+++DEAHER+L+TDIL+G+ ++++R + K L S T+ +E
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSE 410
Score = 144 (55.7 bits), Expect = 2.8e-83, Sum P(5) = 2.8e-83
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 155 LKLLISSATLDAEKFSA----YFNFAPILRVPGRRYPVEIHYTKAPES-NYIDAAIVTTL 209
LKL++ SATL E F + + N P++ VP R+YPV IH++K E +YI A +
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 210 EIHATQASGDILVFLTGQ 227
IH G ILVF+TGQ
Sbjct: 476 SIHKKLPQGGILVFVTGQ 493
Score = 103 (41.3 bits), Expect = 2.8e-83, Sum P(5) = 2.8e-83
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 547 EAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKE 606
E + +AI +G+ AR + Y + V +H S L ++Y EL+LT +
Sbjct: 1006 ELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRP 1065
Query: 607 YMRQVTELKPEWLFEIA 623
YM T ++PEWL + A
Sbjct: 1066 YMHGATRVRPEWLVKHA 1082
Score = 55 (24.4 bits), Expect = 2.8e-83, Sum P(5) = 2.8e-83
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 465 RPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDI 524
R K++K AR F + D + + +S++ ++ +C N + ++M +
Sbjct: 895 RKKDRKEKIKAARDRF-SNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKL 953
Query: 525 RDQLTCLV 532
+DQL LV
Sbjct: 954 KDQLLRLV 961
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 845 (302.5 bits), Expect = 4.0e-83, P = 4.0e-83
Identities = 202/549 (36%), Positives = 298/549 (54%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LPIY YR Q+L+ + Q++V++GETGSGK+TQ+ Q+L ++G + CTQP
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 69 XXXXXXXXEM-GVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
E G + V + F + + YMTD +L+ + D L S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYP 187
+DEAHER+L+TD+LL + K L+ R DL+L+I SAT DA++ S YF IL V GR +P
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 188 VEIHYTKAP-ESN--------YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
VEI Y+ + E N Y+ + +EIH T+ G IL FLT Q
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWA----- 540
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+ T I P++ L E Q ++F P G RKV+ ATNIAETSLTI G+KYV
Sbjct: 541 --CERFITP--SAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYV 595
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
+DSG K Y P+TGM L V +S++SA QRAGR+GRT PG+C+RLY+ N + + M
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-DSMNL 654
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL---NQVG 415
N PEI+R +L +L + LG++++ F+F+D+P GA+ N V
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 416 ELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN--KKFLA 473
ELT+ G + + L+P L K+I+ + + E I +AA+++ +S+F R N K A
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKE--NDYSKQWCYDNFIQFRSMKHARDIRDQLTCL 531
D ++ F + GD LL+VY W + +WC++N + +SM+ D +L
Sbjct: 775 DRLKVQFCNQN-GDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEIC 833
Query: 532 VERVGIELT 540
+ER ELT
Sbjct: 834 IER---ELT 839
Score = 203 (76.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 68/252 (26%), Positives = 118/252 (46%)
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN--K 469
N V ELT+ G + + L+P L K+I+ + + E I +AA+++ +S+F R N
Sbjct: 711 NGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDD 770
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE--NDYSKQWCYDNFIQFRSMKHARDIRDQ 527
K AD ++ F + GD LL+VY W + +WC++N + +SM+ D +
Sbjct: 771 KMKADRLKVQFCNQN-GDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKE 829
Query: 528 LTCLVERVGIELTSS--LCNL-EAMK-----KAIISGFLLHTARLQKNGS---YWTVKHP 576
L +ER ++ S + N E K K +I L + + Y
Sbjct: 830 LEICIERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTG 889
Query: 577 QKVHVHPSSGL---AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEI-APHYYMLKDV 632
Q+V +HPS L Q P WV++ EL+ +Y+ VT E L+ + P + + +
Sbjct: 890 QQVQLHPSCSLLAFGQKPS-WVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQM 948
Query: 633 EDLRKKMPRVAG 644
++ R ++ +V G
Sbjct: 949 DERRLRIKKVVG 960
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 462 (167.7 bits), Expect = 8.1e-82, Sum P(2) = 8.1e-82
Identities = 128/410 (31%), Positives = 205/410 (50%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G +LVF+TG LG ++++ + ++ + Q IF P+G R
Sbjct: 579 GAVLVFMTGWDDINSLKNQLEAH-SLLGDP-NKVLLLACHGSMASSEQRLIFDRPPEGIR 636
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K+VLATN+AETS+TI+ + YV+D G +K Y+ LL ISKA+A QR GR+GR
Sbjct: 637 KIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGR 696
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQ 395
PG+C+ LY Y E D PE+ RT L ++ L +K+LG+ + F L P
Sbjct: 697 VMPGECYHLYPRCVY-EAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEA 755
Query: 396 XXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAAL 455
GAL+ LT +G+ ++ P++P L KM++ F C + ++T+ A
Sbjct: 756 LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 815
Query: 456 LSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWK--ENDYSK-QWCYDNF 512
LSV + F P +KK LA+ AR F D DH+ L+ YN WK E +S +C+ NF
Sbjct: 816 LSVRDP-FLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNF 874
Query: 513 IQFRSMKHARDIRDQLTCLVERVG----IELTSSLCNLEAMKKAII-SGFLLHTARLQKN 567
+ +++K +R Q L++ IE S L + E + +AII +G +
Sbjct: 875 LSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNK 934
Query: 568 GSYWTVKHPQ--KVHVHPSS---GLAQVPKRWVIYHELVLTTKEYMRQVT 612
T+K + +V ++ SS + +P W+++++ V ++R T
Sbjct: 935 EKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDST 984
Score = 401 (146.2 bits), Expect = 8.1e-82, Sum P(2) = 8.1e-82
Identities = 83/191 (43%), Positives = 115/191 (60%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY-TKHG---KVGCTQ 61
RKTLP Y ++ +L+A+ NQVVV+ GETG GKTTQ+PQY+ E+ G + CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G ++G VGY +R E T L + T G++LR +L D L+
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ ++VDE HER ++ D LL + KDL+ R DLKL++ SATL+AE FS+YF AP + +
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 182 PGRRYPVEIHY 192
PG YPV H+
Sbjct: 476 PGFTYPVRAHF 486
Score = 42 (19.8 bits), Expect = 5.1e-44, Sum P(2) = 5.1e-44
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 148 LVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNY 200
L+R + D ++ +S D F A + + R+Y + +KAP NY
Sbjct: 144 LLRNKEDQEV-VSRERKDRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNY 195
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 465 (168.7 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 132/447 (29%), Positives = 219/447 (48%)
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
P R + Y N I+ + E + G IL+FLTG
Sbjct: 466 PETRESLSCWYPDCIGFNLIEFLLCNICE---NEGPGGILIFLTGWDDISSLKEKLQIHP 522
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ L+ C + ++ T Q IF G RK+VLATNIAETS+TI+ + +V+D
Sbjct: 523 IFGNPDLVMLLAC--HGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDC 580
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G +K Y+ LL ISK SA QR GR+GR PG+C+ LY Y + + +
Sbjct: 581 GKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVY-DAFAEYQL 639
Query: 362 PEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTK 419
PEI RT L ++ L +K+L + + F L SP GAL++ +LT
Sbjct: 640 PEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTT 699
Query: 420 VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
+GR +++ P++P L KM++ C + I+T+AA LSV + F P++KK LA+ A+
Sbjct: 700 LGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDP-FLTPQDKKDLAEAAKSQ 758
Query: 480 FYQGDAGDHIALLNVYNSWKENDYSK---QWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
F + D DH+AL+ Y WK+ + +C+ NF+ +S++ +R + L++ G
Sbjct: 759 FSR-DHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTG 817
Query: 537 -IELTSSLCNLEA----MKKAIIS-GFLLHTARLQKNGSYWTVKHPQ--KVHVHPSSGLA 588
I+ S+CN E + +A+I G + N +++K + +V ++ +S A
Sbjct: 818 LIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENA 877
Query: 589 Q---VPKRWVIYHELVLTTKEYMRQVT 612
+ +P W++++E + ++R T
Sbjct: 878 RETKIPYPWLVFNEKIKVNSVFLRDST 904
Score = 394 (143.8 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 84/191 (43%), Positives = 112/191 (58%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE----AGYTKHGKVGCTQ 61
R +LP + R VL A+ +NQV+VI GETG GKTTQIPQ++ E A + CTQ
Sbjct: 217 RTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQ 276
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G +LG VGY +R E T L + T G++LR +L D L
Sbjct: 277 PRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLR 336
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ ++VDE HER ++ D LL I KDL+ RS+LKL++ SATLDAE FS+YF A ++ +
Sbjct: 337 GVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYI 396
Query: 182 PGRRYPVEIHY 192
PG YPV H+
Sbjct: 397 PGFTYPVRSHF 407
Score = 39 (18.8 bits), Expect = 3.6e-44, Sum P(2) = 3.6e-44
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 151 LRSDLKL-LISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNY 200
L+ LK +IS D F A L + Y + ++K P NY
Sbjct: 68 LKDSLKQEVISREKKDRRDFDKLAALATTLGLYSHAYAKVVVFSKIPLPNY 118
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 830 (297.2 bits), Expect = 1.6e-81, P = 1.6e-81
Identities = 202/549 (36%), Positives = 291/549 (53%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LPIY YR Q+L+ + Q++V++GETGSGK+TQ+ Q+L ++G + CTQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 69 XXXXXXXXEM-GVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
E G + V + F + + YMTD +L+ + D L S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYP 187
+DEAHER+L+TD+LL + + L+ R DL+L+I SAT DA + S Y IL V GR +P
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 188 VEIHYTKA-PESN--------YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXX 238
VEI Y+ + E N Y + +EIH T+ G IL FLT Q
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFV 542
Query: 239 XRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
I P++ L E Q +F P G RKV+ ATNIAETSLTI G+KYV
Sbjct: 543 AP---------SAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYV 592
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
+DSG K Y P+TGM L V +S++SA QRAGR+GRT PG+C+RLY+ + + M
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-DSMNL 651
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL---NQVG 415
N PEI+R +L +L + LGID++ F+F+D+P GA+ N V
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVL 711
Query: 416 ELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN--KKFLA 473
ELT+ G + + L+P L K+I+ + + E I +AA+++ +S+F R N K A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKE--NDYSKQWCYDNFIQFRSMKHARDIRDQLTCL 531
D ++ F D GD LL+VY W D +WC++N + +SM+ D +L
Sbjct: 772 DRLKVQFCN-DNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEIC 830
Query: 532 VERVGIELT 540
+ER ELT
Sbjct: 831 IER---ELT 836
Score = 209 (78.6 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 70/252 (27%), Positives = 116/252 (46%)
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN--K 469
N V ELT+ G + + L+P L K+I+ + + E I +AA+++ +S+F R N
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDD 767
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE--NDYSKQWCYDNFIQFRSMKHARDIRDQ 527
K AD ++ F D GD LL+VY W D +WC++N + +SM+ D +
Sbjct: 768 KMKADRLKVQFCN-DNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKE 826
Query: 528 LTCLVERVGIELTSS--LCNL-EAMK-----KAIISGFLLHTARLQKNGS---YWTVKHP 576
L +ER ++ S + N E K K +I L + Y
Sbjct: 827 LEICIERELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTS 886
Query: 577 QKVHVHPSSGL---AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEI-APHYYMLKDV 632
Q+V +HPS L Q P WV++ EL+ +Y+ VT E L+ + P + +
Sbjct: 887 QQVQLHPSCSLLAFGQKPS-WVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQM 945
Query: 633 EDLRKKMPRVAG 644
++ R ++ +V G
Sbjct: 946 DERRLRVKKVVG 957
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 407 (148.3 bits), Expect = 3.4e-81, Sum P(5) = 3.4e-81
Identities = 86/211 (40%), Positives = 126/211 (59%)
Query: 249 GELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKW 308
G L V P+Y+ LPT Q ++F P G+R VV+ATN+AETSLTI IKYVVD+G K ++
Sbjct: 844 GPLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRY 903
Query: 309 YNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTN 368
YN G+ S V SKASA QRAGR+GRTGPG C+R+Y+ + + + + PEI
Sbjct: 904 YNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIP 963
Query: 369 LANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN-QVGELTKVGRQMAEF 427
+ +IL +K++GI + F F P + GAL + +T++G +M++F
Sbjct: 964 IDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKMSQF 1023
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
P+ P SKM++ + C II I ++L+V
Sbjct: 1024 PVSPRHSKMLLLGQEHNCLPYIIAIVSILTV 1054
Score = 321 (118.1 bits), Expect = 3.4e-81, Sum P(5) = 3.4e-81
Identities = 66/159 (41%), Positives = 96/159 (60%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH------GKVGC 59
R LPI ++ +++N VV+I GETGSGKTTQ+PQ+L+E+G+ G +G
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFED-CTSEKTVLKYMTDGMVLREMLSDP 118
TQP E+ V+ G EVGY IR++ S +K+MTDG+++RE+ +D
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKL 157
L YS +++DEAHER L+TDIL+G+ +V LR L L
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 141 (54.7 bits), Expect = 3.4e-81, Sum P(5) = 3.4e-81
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 155 LKLLISSATLDAEKFSA----YFNFAPILRVPGRRYPVEIHYTKAPES-NYIDAAIVTTL 209
LKL++ SATL E F+ + P++ +P R++PV IH+ K E NYID +
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 210 EIHATQASGDILVFLTGQ 227
+IH SG ILVF+TG+
Sbjct: 640 KIHKNLPSGGILVFVTGK 657
Score = 91 (37.1 bits), Expect = 3.4e-81, Sum P(5) = 3.4e-81
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 581 VHPSSGLAQVPKR--WVIYHELVLTTKEYMRQVTELKPEWL 619
+HP+S L V + +VIY +++ T++ YM+ VTE+ P WL
Sbjct: 1260 IHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 53 (23.7 bits), Expect = 3.4e-81, Sum P(5) = 3.4e-81
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 507 WCYDNFIQFRSMKHARDIRDQLTCLVERV 535
+C NF+ +SM +R QLT +V +
Sbjct: 1144 FCSQNFLNTKSMSEIHKLRHQLTEIVNSI 1172
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 441 (160.3 bits), Expect = 5.1e-81, Sum P(3) = 5.1e-81
Identities = 98/237 (41%), Positives = 142/237 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
+Q+ER LPI + ++ AV E+ +V++ GETGSGKTTQ+PQ+L+EAGY+ + G T
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVT 300
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEV-GYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
+P EM L H V Y IR+E +E+T +K+MTDG++L+E+ D
Sbjct: 301 EPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 358
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSA---- 171
L Y V+++DEAHER++ TDILLG+ +V LR+ LKLLI SATL E F+
Sbjct: 359 LLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRL 418
Query: 172 YFNFAPILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
+ P+++V R++PV +H+ K P +Y +IH +G ILVFLTGQ
Sbjct: 419 FTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQ 475
Score = 368 (134.6 bits), Expect = 5.1e-81, Sum P(3) = 5.1e-81
Identities = 91/223 (40%), Positives = 126/223 (56%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QA++F P P+G R V+ATN+AETSLTI GIKYVVD G K ++Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ ++ D E PEI R +
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVE 699
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN-----------QVGEL-- 417
++IL +K L I+ ++NF F P GAL Q+ +L
Sbjct: 700 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSC 759
Query: 418 --TKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
T +GR M+ FP+ P +KM+ S + C I I A ++V
Sbjct: 760 PITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTV 802
Score = 102 (41.0 bits), Expect = 5.1e-81, Sum P(3) = 5.1e-81
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 566 KNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
KN +Y T V +HPSS L + +V+Y E+V TTK YM+ V+ ++ +W+ + P
Sbjct: 945 KN-AYKTPLLDDPVFIHPSSVLFRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPS 1003
Query: 626 Y 626
Y
Sbjct: 1004 Y 1004
Score = 99 (39.9 bits), Expect = 7.7e-53, Sum P(3) = 7.7e-53
Identities = 39/135 (28%), Positives = 64/135 (47%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGN--SVFYRPK-NKKFLA 473
+T +GR M+ FP+ P +KM+ S + C I I A ++V RP +++ LA
Sbjct: 761 ITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELFEELDRPAASEEELA 820
Query: 474 DN-------ARMNFY---QGDA---GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
+ A+M QG + GD + LL + + S Q+C N +++++M
Sbjct: 821 ELKGRRTRVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLE 880
Query: 521 ARDIRDQLTCLVERV 535
R +R QLT V V
Sbjct: 881 IRRLRGQLTTAVNAV 895
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 431 (156.8 bits), Expect = 9.0e-80, Sum P(3) = 9.0e-80
Identities = 96/236 (40%), Positives = 142/236 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
+Q+ER LPI + ++ AV E+ +V++ GETGSGKTTQ+PQ+L+EAG++ + G T
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
+P EM + V Y IR+E +E+T +K+MTDG++L+E+ D L
Sbjct: 92 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 150
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSAYFN-F 175
Y V+++DEAHER++ TDIL+G+ +V LR+ LKLLI SATL E F+ F
Sbjct: 151 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 210
Query: 176 A---PILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
A P+++V R++PV +H+ K P +Y +IH +G ILVFLTGQ
Sbjct: 211 AKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 266
Score = 370 (135.3 bits), Expect = 9.0e-80, Sum P(3) = 9.0e-80
Identities = 92/223 (41%), Positives = 127/223 (56%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QA++F P P+G R V+ATN+AETSLTI GIKYVVD G K ++Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ ++ D E PEI R +
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVE 493
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN---------QVGE----- 416
++IL +K L ++ ++NF F P GAL Q+ E
Sbjct: 494 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 417 -LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
+T +GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 554 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV 596
Score = 107 (42.7 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV------------GNSVFY 464
+T +GR MA FP+ P +KM+ S + C ITI A ++V +
Sbjct: 555 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELT 614
Query: 465 RPKNKKF-LADNARMNFYQGDA---GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
R K+K+ +A R QG + GD + LL + + + Q+C N +++++M
Sbjct: 615 RLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMME 674
Query: 521 ARDIRDQLTCLVERV 535
R +R QLT V V
Sbjct: 675 IRRLRGQLTTAVNAV 689
Score = 102 (41.0 bits), Expect = 9.0e-80, Sum P(3) = 9.0e-80
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 569 SYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+Y T V +HPSS L + +V+Y E+V TTK YM+ V+ ++ +W+ + P Y
Sbjct: 741 AYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQ 800
Query: 629 L-KDVED 634
K +E+
Sbjct: 801 FDKPLEE 807
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 177/509 (34%), Positives = 294/509 (57%)
Query: 152 RSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYT-----KAPESN-YIDAAI 205
++ LK+++ SATL+ EK S+++ P+ +PGR YPV+ + K ES+ Y+ +
Sbjct: 166 KTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVV 225
Query: 206 VTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTK-------IGELIVCPVYA 258
TL++H +A+GDILVFLTGQ + L + + L++ +Y
Sbjct: 226 KMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYG 285
Query: 259 NLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESL 318
++PT+ Q +IF P P G RK V+ATNIA TSLTIDGI+Y+VDSG+ K +N + G++ L
Sbjct: 286 SMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDIL 345
Query: 319 LVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKN 378
V PISK+ A QRAGR+GRT GKCFR+Y+ + + M + T+PEIQRT+L +VIL LK
Sbjct: 346 EVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKC 405
Query: 379 LGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIV 438
LG+ D++ F +LD P + A+++ GE+TK+GR M EFPL P L++ ++
Sbjct: 406 LGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALL 465
Query: 439 ASDKFKCSNEIITIAALLSVGNSVFYRP----KNKKFLADNARMNFYQGDAGDHIALLNV 494
+ C + ++ +AA+LSV N +F RP K K+ + + G + D + LL V
Sbjct: 466 KAAALGCEDIMLPVAAMLSVEN-IFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCV 524
Query: 495 YNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEA-----M 549
+ + ++ WC +N+I +R++K A + QL ++ R+ + E +
Sbjct: 525 FEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQKDFPHERFEGSRSELL 584
Query: 550 KKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL--AQVPKRWVIYHELVLTTKE 606
++ + G+ + AR S+ T+ H V +HPSS L ++ W+I+H++++T++
Sbjct: 585 RQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLDWIIFHDVLVTSRV 644
Query: 607 YMRQVTELKPEWLFEIAPHYYMLKDVEDL 635
Y+R V ++ +W+ ++ P + + DV +L
Sbjct: 645 YVRTVCPIRYDWVKDLLPKLHEI-DVYEL 672
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 109/234 (46%), Positives = 168/234 (71%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXX 64
E K LPIY Y++++++AV+EN +++ GETGSGKTTQ+PQYL++AG +++G++G TQP
Sbjct: 14 ESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIGVTQPRR 73
Query: 65 XXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYS 124
EM V+LG EVGY +RF+DC+++ T++KYMTDG +LRE+L+DP L YS
Sbjct: 74 VAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQYS 133
Query: 125 VLMVDEAHERTLSTDILLGIFKD-LVR----LRSDLKLLISSATLDAEKFSAYFNFAPIL 179
++++DEAHER+L+TD+LLG+ K L++ ++ LK+++ SATL+ EK S+++ P+
Sbjct: 134 IVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVF 193
Query: 180 RVPGRRYPVEIHYT-----KAPESN-YIDAAIVTTLEIHATQASGDILVFLTGQ 227
+PGR YPV+ + K ES+ Y+ + TL++H +A+GDILVFLTGQ
Sbjct: 194 TIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLTGQ 247
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 434 (157.8 bits), Expect = 2.3e-79, Sum P(3) = 2.3e-79
Identities = 97/236 (41%), Positives = 140/236 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
+Q+ER LPI + ++ AV E+ +V+I GETGSGKTTQ+PQ+L+EAGY+ V G T
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVT 302
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
+P EM + V Y IR+E +E+T +K+MTDG++L+E+ D L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSA----Y 172
Y V+++DEAHER++ TDIL+G+ +V LR LKLLI SATL E F+ +
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLF 421
Query: 173 FNFAPILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
P+++V R++PV +H+ K P +Y +IH +G ILVFLTGQ
Sbjct: 422 TQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 477
Score = 368 (134.6 bits), Expect = 2.3e-79, Sum P(3) = 2.3e-79
Identities = 93/223 (41%), Positives = 127/223 (56%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QA++F P P+G R V+ATN+AETSLTI GIKYVVD G K + Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ ++ D E PEI R +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEKYPPPEITRRPVE 704
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN------QVGEL------- 417
++IL +K L I+ ++NF F P GAL +V +L
Sbjct: 705 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSC 764
Query: 418 --TKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
T++GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 765 PITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTV 807
Score = 108 (43.1 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV------------GNSVFY 464
+T++GR MA FP+ P +KM+ S + C ITI A ++V +
Sbjct: 766 ITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELFEELDRPAASDEELA 825
Query: 465 RPKNKKF-LADNARMNFYQGDA---GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
R K K+ +A R+ QG + GD + LL + + S Q+C N +++++M
Sbjct: 826 RLKGKRARVAQMKRIWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMME 885
Query: 521 ARDIRDQLT 529
R +R QLT
Sbjct: 886 IRRLRGQLT 894
Score = 100 (40.3 bits), Expect = 2.3e-79, Sum P(3) = 2.3e-79
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 566 KNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
KN +Y T V +HPSS L + +V+Y E+V TTK YM+ V+ + +W+ + P
Sbjct: 950 KN-AYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPS 1008
Query: 626 YYML-KDVED 634
Y K +E+
Sbjct: 1009 YCQFDKPLEE 1018
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 431 (156.8 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 96/236 (40%), Positives = 142/236 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
+Q+ER LPI + ++ AV E+ +V++ GETGSGKTTQ+PQ+L+EAG++ + G T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
+P EM + V Y IR+E +E+T +K+MTDG++L+E+ D L
Sbjct: 305 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 363
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSAYFN-F 175
Y V+++DEAHER++ TDIL+G+ +V LR+ LKLLI SATL E F+ F
Sbjct: 364 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 423
Query: 176 A---PILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
A P+++V R++PV +H+ K P +Y +IH +G ILVFLTGQ
Sbjct: 424 AKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 479
Score = 370 (135.3 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 92/223 (41%), Positives = 127/223 (56%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QA++F P P+G R V+ATN+AETSLTI GIKYVVD G K ++Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ ++ D E PEI R +
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVE 706
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN---------QVGE----- 416
++IL +K L ++ ++NF F P GAL Q+ E
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 417 -LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
+T +GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 767 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV 809
Score = 107 (42.7 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV------------GNSVFY 464
+T +GR MA FP+ P +KM+ S + C ITI A ++V +
Sbjct: 768 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELT 827
Query: 465 RPKNKKF-LADNARMNFYQGDA---GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
R K+K+ +A R QG + GD + LL + + + Q+C N +++++M
Sbjct: 828 RLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMME 887
Query: 521 ARDIRDQLTCLVERV 535
R +R QLT V V
Sbjct: 888 IRRLRGQLTTAVNAV 902
Score = 102 (41.0 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 569 SYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+Y T V +HPSS L + +V+Y E+V TTK YM+ V+ ++ +W+ + P Y
Sbjct: 954 AYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQ 1013
Query: 629 L-KDVED 634
K +E+
Sbjct: 1014 FDKPLEE 1020
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 425 (154.7 bits), Expect = 6.9e-79, Sum P(2) = 6.9e-79
Identities = 91/223 (40%), Positives = 138/223 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ H V CTQ
Sbjct: 155 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-H--VACTQ 211
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E + G +VGY IRFE S T + ++T G++LR++ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF+ AP+++V
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFL 224
PGR +P+ + + AP + I++T I T + D + F+
Sbjct: 332 PGRLFPITV-FDVAPPG--VRKCILST-NIAETSVTIDGIRFV 370
Score = 387 (141.3 bits), Expect = 6.9e-79, Sum P(2) = 6.9e-79
Identities = 83/198 (41%), Positives = 119/198 (60%)
Query: 268 IFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKAS 327
+F P G RK +L+TNIAETS+TIDGI++VVDSG K Y+P+ ++ L + IS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 328 AMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNF 387
A QR GR+GRTGPG CFRLY + Y + VPEI+R L +++L +K++ + D F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 388 DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
F++ PP GAL+ LT +G +A+ P+D ++ KM++ F
Sbjct: 459 PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVE 518
Query: 448 EIITIAALLSVGNSVFYR 465
++TIAA LSV S F R
Sbjct: 519 PVLTIAAALSV-QSPFTR 535
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 452 (164.2 bits), Expect = 8.4e-79, Sum P(3) = 8.4e-79
Identities = 100/237 (42%), Positives = 146/237 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+QK R LPI+ +++ A+ EN V V+ GETGSGKTTQIPQ+L+EAGY G+ +G T
Sbjct: 229 IQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGIT 288
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
+P +GV+L EV Y IR+E SE T + +MTDG++++EM D
Sbjct: 289 EPRRVAAIAMAQ----RVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDV 344
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSAYFN 174
L+ YSV+++DEAHER++ +D+L+G+ +V LRS L+L+I SATL + F+
Sbjct: 345 MLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKL 404
Query: 175 F---AP-ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
F P +++V R++PV +H+ K +YI +A T IH T G ILVF+TGQ
Sbjct: 405 FPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQ 461
Score = 332 (121.9 bits), Expect = 8.4e-79, Sum P(3) = 8.4e-79
Identities = 81/217 (37%), Positives = 120/217 (55%)
Query: 250 ELIVC-PVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKW 308
E + C P+Y+ L Q ++F TP G R V++TN+AETSLTI G+KYV+D G+ K +
Sbjct: 573 EPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRL 632
Query: 309 YNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTN 368
Y+ TG+ V IS+AS QRAGR+GR G +RLY+ YQ D PEI
Sbjct: 633 YDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQ-DFVKFADPEILSKP 691
Query: 369 LANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQV---GE----LTKVG 421
++L LK++ I ++NF F +P + GAL++ G+ +TK+G
Sbjct: 692 ADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLG 751
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
+ +A FPL P +K I +D+ + I + +LLSV
Sbjct: 752 KTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788
Score = 93 (37.8 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVF----YR---PKNK 469
+TK+G+ +A FPL P +K I +D+ + I + +LLSV + R P+
Sbjct: 747 ITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEET 806
Query: 470 KFLADNA-----RMNFYQGDA--GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHAR 522
K L N R + G GD L++ + ++ Y+ + C ++ +++ AR
Sbjct: 807 KELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEAR 866
Query: 523 DIRDQLTCLV 532
+R QLT +V
Sbjct: 867 KLRQQLTNIV 876
Score = 74 (31.1 bits), Expect = 8.4e-79, Sum P(3) = 8.4e-79
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 564 LQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV-LTTKEYMRQVTELKPEWLFEI 622
+QK G+Y T V + P S + +VIY ELV + K+ M V + EWL +
Sbjct: 928 VQK-GAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRL 986
Query: 623 APHY 626
A Y
Sbjct: 987 AESY 990
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 173/509 (33%), Positives = 288/509 (56%)
Query: 152 RSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--APE----SNYIDAAI 205
++++K+++ SATL+ +K S +F +L +PGR YPV+ + +P S Y+ A+
Sbjct: 150 KTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAV 209
Query: 206 VTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTK-------IGELIVCPVYA 258
TL+IH + GDILVFLTGQ + + + I L++ P+Y
Sbjct: 210 KVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYG 269
Query: 259 NLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESL 318
++ T+ Q +IF+P P G RK V++TNIA TSLTI+G++YVVDSG+ K +NP+ G++ L
Sbjct: 270 SMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDIL 329
Query: 319 LVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKN 378
V PISK+ AMQRAGR+GRT GK +RLY+ +++ M D+TVPEI+RT+L +VIL LK
Sbjct: 330 EVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKC 389
Query: 379 LGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQV--GELTKVGRQMAEFPLDPMLSKM 436
L + D++ F +LD P + A+++ G +T++G + +FPL P LS
Sbjct: 390 LSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCA 449
Query: 437 IVASDKFKCSNEIITIAALLSVGNSVFYRP----KNKKFLADNARMNFYQGDAGDHIALL 492
++ + C + ++ IAA+LSV N VF RP K K+ + ++ G D LL
Sbjct: 450 VIKAASLDCEDMLLPIAAMLSVEN-VFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLL 508
Query: 493 NVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI-----ELTSSLCNLE 547
N++ K + WC+ +I +R++K A + QL + ++ + T E
Sbjct: 509 NIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETFEGSRTE 568
Query: 548 AMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGLAQVPKR--WVIYHELVLTT 604
+++ + +G+ ++ AR ++ T+ H V++HPSS L R W+I+H++ +T+
Sbjct: 569 LLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTS 628
Query: 605 KEYMRQVTELKPEWLFEIAPHYYMLKDVE 633
K Y+R V ++ EW+ ++ P + + E
Sbjct: 629 KIYVRTVCPVRYEWVKDLLPRLHQIDAYE 657
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 106/231 (45%), Positives = 151/231 (65%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LPI +R ++RAV E +++ GETGSGK+TQ+P+YL+EAG +HG +G TQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
EMG LG VGY +RF+DC+SE+T +KYMTDG +LR +L+DP L YS++++
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 129 DEAHERTLSTDILLGIFKDLVRL------RSDLKLLISSATLDAEKFSAYFNFAPILRVP 182
DEAHER+LSTDIL G+ K L ++++K+++ SATL+ +K S +F +L +P
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 183 GRRYPVEIHYTK--APE----SNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV+ + +P S Y+ A+ TL+IH + GDILVFLTGQ
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQ 231
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 432 (157.1 bits), Expect = 8.8e-79, Sum P(3) = 8.8e-79
Identities = 95/236 (40%), Positives = 140/236 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
+Q+ER LPI + ++ AV E+ +V++ GETGSGKTTQ+PQ+L+EAGY+ + G T
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGIT 298
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
+P EM + V Y IR+E +E+T +K+MTDG++L+E+ D L
Sbjct: 299 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 357
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSAYFNF- 175
Y V+++DEAHER++ TDIL+G+ +V LR+ LKLLI SATL E F+
Sbjct: 358 LRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLF 417
Query: 176 ---APILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
P+++V R++PV +H+ K P +Y +IH +G ILVFLTGQ
Sbjct: 418 PQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 473
Score = 367 (134.2 bits), Expect = 8.8e-79, Sum P(3) = 8.8e-79
Identities = 93/223 (41%), Positives = 125/223 (56%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QA++F P P+G R V+ATN+AETSLTI GIKYVVD G K + Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V +S+ASA QRAGR+GRT PG C+RLY+ ++ D E PEI R +
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFSDFEQFPPPEITRRPVE 700
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN--QVGE------------ 416
++IL +K L I+ ++NF F P GAL Q E
Sbjct: 701 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 417 -LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSV 458
+T +GR MA FP+ P +KM+ S + C ITI A ++V
Sbjct: 761 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTV 803
Score = 114 (45.2 bits), Expect = 2.7e-52, Sum P(3) = 2.7e-52
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGN--SVFYRP-------- 466
+T +GR MA FP+ P +KM+ S + C ITI A ++V RP
Sbjct: 762 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELFEELDRPAASDEELG 821
Query: 467 --KNKKF-LADNARMNFYQGDA---GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
K+K+ +A R+ QG + GD + LL + + + S Q+C N +++++M
Sbjct: 822 QLKDKRARVAQMKRIWAGQGASLKLGDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMME 881
Query: 521 ARDIRDQLTCLVERV 535
R +R QLT V V
Sbjct: 882 IRRLRGQLTTAVNTV 896
Score = 99 (39.9 bits), Expect = 8.8e-79, Sum P(3) = 8.8e-79
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 566 KNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
KN +Y T V +HPSS L + +V+Y E++ TTK YM+ V+ ++ +W+ + P
Sbjct: 946 KN-AYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPS 1004
Query: 626 YYML-KDVED 634
Y K +E+
Sbjct: 1005 YCQFDKPLEE 1014
Score = 40 (19.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 114 MLSDPKLESYSVLMVDEAHE 133
ML L+SYSVL E E
Sbjct: 524 MLPQISLDSYSVLPAGEGDE 543
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 422 (153.6 bits), Expect = 1.4e-77, Sum P(3) = 1.4e-77
Identities = 92/236 (38%), Positives = 141/236 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
+Q+ R LP+ + ++ AV++++ VV+ GETGSGKTTQ+PQ+L+EAG+ G + G T
Sbjct: 245 IQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVT 304
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
+P EM + G V Y IR+E +E T +K MTDG++L+E+ D L
Sbjct: 305 EPRRVAAISMSHRVATEMNLSSG-VVSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLL 363
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----LKLLISSATLDAEKFSA----Y 172
+ YSV+++DEAHER++ TDIL+G+ +V LR+ +KL+I SATL E F+ +
Sbjct: 364 QKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLF 423
Query: 173 FNFAPILRVPGRRYPVEIHYTK-APESNYIDAAIVTTLEIHATQASGDILVFLTGQ 227
+ P+++V R++ V +H+ K P +Y +IH G ILVFLTGQ
Sbjct: 424 SSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQ 479
Score = 363 (132.8 bits), Expect = 1.4e-77, Sum P(3) = 1.4e-77
Identities = 96/247 (38%), Positives = 138/247 (55%)
Query: 251 LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYN 310
L V P+Y+ L E QAK+F P P G+R V+ATN+AETSLTI GIKYVVD G K ++Y+
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
TG+ S V IS+ASA QRAGR+GRT PG C+RLY+ ++ D + EI R +
Sbjct: 640 RVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYS-SAVFGDFSLFSEAEITRRPVE 698
Query: 371 NVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQ------VGELTK----- 419
+++L +K+L I+ ++NF F P GAL + + E+ K
Sbjct: 699 DLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSC 758
Query: 420 ----VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVF--Y-RPKNKKFL 472
+GR MA FP+ P +KM+ + C IITI + ++V +F Y RP +
Sbjct: 759 PISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTV-REIFEDYDRPAGSE-- 815
Query: 473 ADNARMN 479
+N +M+
Sbjct: 816 EENVKMS 822
Score = 111 (44.1 bits), Expect = 8.3e-52, Sum P(4) = 8.3e-52
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSV--FYRP-----KNK 469
++ +GR MA FP+ P +KM+ + C IITI + ++V + RP +N
Sbjct: 760 ISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIFEDYDRPAGSEEENV 819
Query: 470 KFLADNARM----NFYQGDA-----GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKH 520
K AR + G GD + LL + + + Q+C +N ++F++M
Sbjct: 820 KMSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLE 879
Query: 521 ARDIRDQLTCLVERV 535
R +R QLT V V
Sbjct: 880 IRRLRGQLTNAVNAV 894
Score = 107 (42.7 bits), Expect = 1.4e-77, Sum P(3) = 1.4e-77
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 569 SYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHY 626
+Y T V +HPSS L + +V+Y E++ TTK YMR V ++ +W+ ++ P Y
Sbjct: 946 AYKTPLLDDPVFIHPSSALHKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQY 1003
Score = 40 (19.1 bits), Expect = 8.3e-52, Sum P(4) = 8.3e-52
Identities = 11/54 (20%), Positives = 21/54 (38%)
Query: 311 PKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEI 364
P+ +++ P+ + ++AG G G L + D E+ P I
Sbjct: 525 PRINLDNYSALPVDEGDEDRQAGIDEDDGEGSDLELELGDHPDTDHEEKADPSI 578
Score = 39 (18.8 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 120 LESYSVLMVDEAHE 133
L++YS L VDE E
Sbjct: 529 LDNYSALPVDEGDE 542
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 183/537 (34%), Positives = 292/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F+D R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 188 LLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIK 427
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 488 EFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 546
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK--DVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P + L D+ + R++M A R W
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMREDARRKW 723
Score = 542 (195.9 bits), Expect = 3.6e-52, P = 3.6e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 282
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 181/537 (33%), Positives = 293/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F+D R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 188 LLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD----NARMNFY 481
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + + +
Sbjct: 488 EFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQKHRELAAK 546
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
G D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK--DVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P + L D+ + R++M A R W
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKW 723
Score = 542 (195.9 bits), Expect = 3.6e-52, P = 3.6e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 282
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 454 (164.9 bits), Expect = 6.0e-77, Sum P(2) = 6.0e-77
Identities = 121/408 (29%), Positives = 207/408 (50%)
Query: 176 APILRVPGRRYPVEIHYTKAP--------------ESNYIDAA-IVTTLEI----HATQA 216
A +++VPGR +P+++ Y P + N ID A V L + + T
Sbjct: 312 ARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSE 371
Query: 217 SGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGA 276
GD+L+F++G + + T+ +V P+++ Q+K+F P+G
Sbjct: 372 RGDVLIFVSGVNEIESVVEA----VHEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGM 427
Query: 277 RKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSG 336
RK +++TNIAETSLT+DG+++VVDSG K ++ + L + +SK+SA QR GR+G
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG 487
Query: 337 RTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQX 396
RTGPG CFRLYT Y E PEI R L ++L + ++G+ D+ F F+++P
Sbjct: 488 RTGPGVCFRLYTAEQYNA-FEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETE 546
Query: 397 XXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALL 456
AL+ ++T +GR +A P++ + KM++ F +++T+AA+L
Sbjct: 547 RIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAML 606
Query: 457 SVGNSVFYRPK-NKKFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCYDN 511
SV N + R +++ + + + + D GD L+ +YN W + D ++QWC
Sbjct: 607 SVQNPLTNRAHTDQRCVRERESL---ESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRL 663
Query: 512 FIQFRSMKHARDIRDQLTCLVERVGIELTS-SLCNLEAMKKAIISGFL 558
I+ + +R Q ++E G+ + S S L + ++A G L
Sbjct: 664 GIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERATRHGEL 711
Score = 362 (132.5 bits), Expect = 6.0e-77, Sum P(2) = 6.0e-77
Identities = 72/197 (36%), Positives = 118/197 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L++ ++ LPI +R+ + A+ ++VV++ G+TG GK+TQ+PQYL++ GY + CTQ
Sbjct: 139 LRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQ 195
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E+ G V + IRFE ++ T + ++T+G++LR++ L+
Sbjct: 196 PRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLD 255
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF--APIL 179
Y L++DE HER L D LLG+ K L+R R LKL++ SAT++ E F YF A ++
Sbjct: 256 QYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLV 315
Query: 180 RVPGRRYPVEIHYTKAP 196
+VPGR +P+++ Y P
Sbjct: 316 QVPGRLFPIKLRYLPPP 332
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 181/537 (33%), Positives = 293/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 188 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 488 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 546
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 607 PKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 723
Score = 544 (196.6 bits), Expect = 2.0e-52, P = 2.0e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 282
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 181/537 (33%), Positives = 293/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 188 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 488 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 546
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 723
Score = 542 (195.9 bits), Expect = 3.6e-52, P = 3.6e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 282
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 181/537 (33%), Positives = 293/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 266 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 325
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 326 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 385
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 386 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 445
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 446 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 505
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 506 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 565
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 566 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 624
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 625 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 684
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 685 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 744
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 745 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 801
Score = 542 (195.9 bits), Expect = 9.9e-52, P = 9.9e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 189
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 190 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 249
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 250 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 309
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 310 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 360
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 181/537 (33%), Positives = 293/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 188 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 488 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 546
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 666
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 723
Score = 542 (195.9 bits), Expect = 3.6e-52, P = 3.6e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 282
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 181/537 (33%), Positives = 293/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 111 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 170
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 171 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 230
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 231 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 290
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 291 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 350
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 351 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 410
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 411 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 469
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 470 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 529
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+HPSS L Q K
Sbjct: 530 PKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLE 589
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 590 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 646
Score = 306 (112.8 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 64/140 (45%), Positives = 90/140 (64%)
Query: 99 KTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD---- 154
+T +KYMTDG +L+ +L DP L +SV+++DEAHERTL+TDIL G+ K L + +S
Sbjct: 66 ETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKE 125
Query: 155 -LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--APESN----YIDAAIVT 207
LK+++ SAT++ K SA+F PI +PGR YPV + P YI A +
Sbjct: 126 HLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKV 185
Query: 208 TLEIHATQASGDILVFLTGQ 227
T++IH + +GDILVFLTGQ
Sbjct: 186 TMDIHLNEMAGDILVFLTGQ 205
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 441 (160.3 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 126/430 (29%), Positives = 217/430 (50%)
Query: 199 NYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYA 258
N I+A + I + G +LVFLTG LG +++ +
Sbjct: 524 NLIEAVLC---HICRKERPGAVLVFLTGWDDIRSLSDQIKAH-PLLGDP-NRVLLLMCHG 578
Query: 259 NLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESL 318
++ T Q IF P RK+VLATN+AE S+TI+ + +VVD G +K Y+ L
Sbjct: 579 SMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCL 638
Query: 319 LVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKN 378
L IS+ASA QR GR+GR PG+C+ LY Y + + +PE+ RT L ++ L +K+
Sbjct: 639 LPSWISQASARQRRGRAGRLFPGECYHLYPKCVY-DAFAEYQLPELLRTPLNSLCLQIKS 697
Query: 379 LGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKM 436
L ++ + F L +P GAL++ LT +G+ ++ P+DP L KM
Sbjct: 698 LQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKM 757
Query: 437 IVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYN 496
++ F+C + I+TI + LSV + F P++KK LA +A++ F D DH+AL+ +
Sbjct: 758 LIMGAIFRCFDPILTIVSGLSVRDP-FLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFE 816
Query: 497 SWK--ENDYSK-QWCYDNFIQFRSMKHARDIRDQLTCLVERVGI-----ELTSSLCNLEA 548
WK E + S ++C+ NF+ ++++ +R Q +++ G+ L + L + ++
Sbjct: 817 GWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQS 876
Query: 549 MKKAII-SGFLLHTARL---QKNGSYWTVKHPQ-KVHVHP-SSGLAQVPKRWVIYHELVL 602
+ +A+I SG A + + + S+ T+ Q ++ + +S +P W+++ E V
Sbjct: 877 LVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFGEKVK 936
Query: 603 TTKEYMRQVT 612
+R T
Sbjct: 937 VNAVLIRDST 946
Score = 383 (139.9 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 78/191 (40%), Positives = 115/191 (60%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEA----GYTKHGKVGCTQ 61
RKTLP + +E++L+A+ NQV+V+ GETG GKTTQ+PQY+ E+ G + CTQ
Sbjct: 257 RKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQ 316
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
P E G LG VG+ +R E + T L + T G++LR +LSD L
Sbjct: 317 PRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLN 376
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ + VDE HER ++ D L+ + K+L+ R DL+L++ SATL+AE FS Y+ AP + +
Sbjct: 377 GVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHI 436
Query: 182 PGRRYPVEIHY 192
PG +PV+ H+
Sbjct: 437 PGFTHPVKAHF 447
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 178/537 (33%), Positives = 291/537 (54%)
Query: 140 ILLGIFKDLVRLRSD-LKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTK--AP 196
+L +F++ R + LK+++ SAT++ K SA+F PI +PGR YPV + P
Sbjct: 188 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247
Query: 197 ESN----YIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLG------- 245
YI A + T++IH + +GDILVFLTGQ +
Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307
Query: 246 TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSK 305
T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TSLTIDGI+YVVD G+ K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 306 MKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQ 365
+NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+ + + + M D+ +PEI+
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 366 RTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
RT+L +V+L LK L I D++ F +LD P + A+++ G +T++G M
Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMV 487
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLAD-NARMNFYQGD 484
EFPL P L+ ++ + C + ++ IAA+LSV N VF RP + ++ + R
Sbjct: 488 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAK 546
Query: 485 AG---DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL-- 539
AG D L ++ K + WC ++I +R + A + QL L+ ++ +
Sbjct: 547 AGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF 606
Query: 540 ---TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKVHVHPSSGL-AQVPK-R 593
T E +++ + +G+ + AR ++ T+ VH+H + L Q K
Sbjct: 607 PRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLHEQETKLE 666
Query: 594 WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL-RKKMPRVAGRPW 647
W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ + R+++ A R W
Sbjct: 667 WIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRW 723
Score = 542 (195.9 bits), Expect = 3.7e-52, P = 3.7e-52
Identities = 104/231 (45%), Positives = 152/231 (65%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXX 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 XXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APESN----YIDAAIVTTLEIHATQASGDILVFLTGQ 227
GR YPV + P YI A + T++IH + +GDILVFLTGQ
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 282
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 691 (248.3 bits), Expect = 6.9e-75, Sum P(2) = 6.9e-75
Identities = 160/396 (40%), Positives = 224/396 (56%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LPI Q+ A+ NQVV+I GETGSGKTTQIP+ E G G +G TQP
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIAAR 158
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
E+G KLG +VGY +RF D SE++ +K MTDG++L EM D L Y +++
Sbjct: 159 TVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIII 218
Query: 129 DEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF-----APILRVPG 183
DEAHER+L+ D +LG K ++ R DLKL+I+SAT+D ++F+ +F+ API+ V G
Sbjct: 219 DEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSG 278
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXR-IR 242
R +PVE+ Y + ID + E+ + L+ R IR
Sbjct: 279 RTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREIR 338
Query: 243 KLGT-----KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKY 297
+ V P+YA L Q +IF P R +VLATN+AETSLT+ GIKY
Sbjct: 339 DTAAALVKANLRHTNVLPLYARLTVSEQNQIF--KPHSGRNIVLATNVAETSLTVPGIKY 396
Query: 298 VVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDME 357
V+D G +++ Y+ +T ++ L + P+S+ASA QR+GR GR G C RLY+ + Y+ E
Sbjct: 397 VIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAE 456
Query: 358 DNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSP 393
T PEI RTNLA VIL + L + D+ NF F+++P
Sbjct: 457 F-TDPEILRTNLATVILQMHALDLGDIANFPFVEAP 491
Score = 466 (169.1 bits), Expect = 9.7e-51, Sum P(2) = 9.7e-51
Identities = 125/369 (33%), Positives = 198/369 (53%)
Query: 194 KAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIV 253
++P+ I + I++ ++ + +GDILVFL G+ + + V
Sbjct: 301 QSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREIRDTAAAL------VKANLRHTNV 354
Query: 254 CPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKT 313
P+YA L Q +IF P R +VLATN+AETSLT+ GIKYV+D G +++ Y+ +T
Sbjct: 355 LPLYARLTVSEQNQIF--KPHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 412
Query: 314 GMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVI 373
++ L + P+S+ASA QR+GR GR G C RLY+ + Y+ E T PEI RTNLA VI
Sbjct: 413 KVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAEF-TDPEILRTNLATVI 471
Query: 374 LILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQV--------G-------ELT 418
L + L + D+ NF F+++P A+ + G +LT
Sbjct: 472 LQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLT 531
Query: 419 KVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARM 478
K GR +A+FP+DP L+KM+V+S +F C +I+ I + LS+ + RP K+ L+D +
Sbjct: 532 KSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPR-ERPHEKQQLSDE-KH 589
Query: 479 NFYQGDAGDHIALLNVY---NSWKENDYSKQW---CYDNFIQFRSMKHARDIRDQLTCLV 532
N ++ + D I+LLN++ N K++ Q+ C F+ + ++ +DI QL +
Sbjct: 590 NRFKDKSSDFISLLNLWQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTL 649
Query: 533 ERVGIELTS 541
+ I LTS
Sbjct: 650 KEQQITLTS 658
Score = 104 (41.7 bits), Expect = 6.9e-75, Sum P(2) = 6.9e-75
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 546 LEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTK 605
L + +A++SG L H + +N Y + K + P S L + +W++ ELV T++
Sbjct: 690 LTPVHQALLSGLLSHIGQQDENREYKGARG-MKFFIFPGSALTKKSPKWLMSAELVETSR 748
Query: 606 EYMRQVTELKPEWLFEIAPH 625
+ R ++ P WL +A H
Sbjct: 749 LFARMNAKIDPLWLEPLAQH 768
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 431 (156.8 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 120/407 (29%), Positives = 205/407 (50%)
Query: 201 IDAAIVTTLEIHATQASGDILVFLTG-QXXXXXXXXXXXXRIRKLGTKIGELIVCPVYAN 259
+ AA++ + ++ + G ILVFL G ++ K G I+ P+++
Sbjct: 488 LTAALIRHIAVNENE--GAILVFLPGWDNISTLNDLLMSDQMFKSGRY--RFIIIPLHSL 543
Query: 260 LPTELQAKI-------FVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
+PT Q ++ F P G RK+V+ATNIAETS+TID + YV+D G K ++ +
Sbjct: 544 MPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 603
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDN-TVPEIQRTNLAN 371
+ ++ +S A+A QR GR+GR PGKC+ LY N + + DN +PEIQRT L
Sbjct: 604 NNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLY--NGLRASLLDNYQLPEIQRTPLEE 661
Query: 372 VILILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPL 429
+ L +K L + + F +D P AL++ +LT +G +A P+
Sbjct: 662 LCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPV 721
Query: 430 DPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHI 489
+P + KMI+ C + ++TIAA LS + F+ P K+ +AD R F Q DH+
Sbjct: 722 EPHIGKMILFGALLGCLDPVLTIAASLSFKDP-FFIPLGKEKIADQRRKMFSQNSRSDHL 780
Query: 490 ALLNVYNSWKE-----NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT---- 540
+++N + W++ + + +++C+DNF+ +++ ++++ Q + R G +
Sbjct: 781 SIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPK 840
Query: 541 --SSLCNLEAMK--KAII-SGFLLHTARLQKNGSYWTVKHPQKVHVH 582
SS N E K KA+I +G A++ + + K P V V+
Sbjct: 841 DPSSNINSENKKLVKAVIVAGLYPKVAKISPSHNK---KRPMPVKVY 884
Score = 358 (131.1 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 80/193 (41%), Positives = 115/193 (59%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-----KVG 58
K RK LP Y RE+++R + N+V+VI GETG GKTTQ+ Q++ + + + G +V
Sbjct: 215 KFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILD-DFIQRGQGSLCRVV 273
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVLREML 115
CTQP E +G GY IR + K L Y T G++L+ +
Sbjct: 274 CTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLH 333
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
SDP L S + L++DE HER++ +DIL+ I KDL+ R DLK+++ SATL+AEKFS YFN
Sbjct: 334 SDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNN 393
Query: 176 APILRVPGRRYPV 188
P++ +PG +PV
Sbjct: 394 CPMIHIPGYTFPV 406
Score = 67 (28.6 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 578 KVHVHPSSGLA---QVPKRWVIYHELVLTTKEYMRQVTELKP 616
KV +HP S A Q +W++YH + TT ++ TE+ P
Sbjct: 890 KVCIHPKSVNAEETQFQYKWLVYHLKMKTTSIFLYDCTEVSP 931
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 199/650 (30%), Positives = 333/650 (51%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQ--VVVIVGETGSGKTTQIPQYLHEAGYTKH---GK 56
L ++R+ LPI+ R L ++ + VV++ G+ GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
V TQP EM + LGHE+GYSI EDCT T+L++ D + L+E+ S
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRS---DLKLLISSATLDAEKFSAYF 173
++SVL++DEA ER++++D+L G+ +D RLR+ D ++++ + KF A++
Sbjct: 155 TRGPGAWSVLILDEAQERSVASDLLQGLLRD-TRLRNLPGDPRVVVVTDPALEPKFQAFW 213
Query: 174 NFAPILRVPGRRYP---VEIHYTKAPESNYIDAAIVTTLEI-HATQASGDILVFLTGQXX 229
+PI+RVP R P + Y ++ ++AA LE+ +A GD+LV+L +
Sbjct: 214 GNSPIVRVP--REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEE 271
Query: 230 XXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETS 289
+ L V P++ +Q ++ T RK+V+ +A+ S
Sbjct: 272 ISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFS 330
Query: 290 LTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTI 349
++ I++V+DSG YNP+ ES ++ PISK A R R+ PG C RLY+
Sbjct: 331 FSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSK 390
Query: 350 NSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXG 409
++ + + P++ NL++++L+L I + FLD P
Sbjct: 391 STLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLA 450
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
ALN GEL+ +G ++EFPL P L+K ++AS +F C +E++T+AA+L+ F RP
Sbjct: 451 ALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPPLS 509
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLT 529
A R D GDH +L+ VY ++ ++ + WC + + S+ AR +R +L
Sbjct: 510 AGEAA-LRRALEHAD-GDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELV 567
Query: 530 CLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKVHVHPS 584
L++R+ + L+ S N ++KA++SG+ L AR G+Y + H + P
Sbjct: 568 ELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPY 627
Query: 585 SGL------AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
AQ P WV+YH ++ + V+E++PE L E+AP Y++
Sbjct: 628 CSYRNRRTPAQ-PPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFL 676
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 447 (162.4 bits), Expect = 2.2e-74, Sum P(2) = 2.2e-74
Identities = 124/394 (31%), Positives = 195/394 (49%)
Query: 156 KLLISSATLDAEKFSAYFNFA-PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLE-IHA 213
K+ TL AE + Y ++ P + P+ I+ PE I++ + +E H
Sbjct: 696 KIKDEKLTL-AETYQRYAEYSKPTCKSIYLMEPMTIN----PE--LIESVLKYIVEGSHD 748
Query: 214 TQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP 273
G IL+FL G + G+ I+ P+++ L E QA +F P
Sbjct: 749 WPREGTILIFLPGFGEIQSVHDSLLDNAL-FSPRAGKFILVPLHSALSGEDQALVFKKAP 807
Query: 274 DGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAG 333
G RK+VL+TNIAETS+TID +VVD G K K ++ MESL + +S+A+A QR G
Sbjct: 808 PGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKG 867
Query: 334 RSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN-----FD 388
R+GR PG C LYT YQ + VPEIQR L ++L +K L N +
Sbjct: 868 RAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLE 927
Query: 389 FLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNE 448
L++P + GAL+ +LT +G +A P+D + K+++ F+C +
Sbjct: 928 TLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDS 987
Query: 449 IITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KENDY- 503
++TIAA LS S F P NK+ AD + F G++ DH+ +LN Y W + +Y
Sbjct: 988 VLTIAACLS-NKSPFVSPLNKRTEADKCKRMFALGNS-DHLTVLNAYRKWLDVARRGNYA 1045
Query: 504 -SKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
S+ + ++F+ +++ D++ Q L+ +G
Sbjct: 1046 ASRNYASEHFLSLNTLETIADLKYQYLELLVSIG 1079
Score = 360 (131.8 bits), Expect = 2.2e-74, Sum P(2) = 2.2e-74
Identities = 79/195 (40%), Positives = 117/195 (60%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-----------H 54
RK LP + E++L ++ + VVVI GETG GK+TQ+PQ++ + + + H
Sbjct: 450 RKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPH 509
Query: 55 GKVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREM 114
++ CTQP E ++G VGY IR E+ S+ T L + T G++LR +
Sbjct: 510 VEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRL 569
Query: 115 LSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN 174
SDP L S + ++VDE HER+ +D LL I K+L+R R DLK+++ SATL+A FS YF
Sbjct: 570 ASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFG 629
Query: 175 FAPILRVPGRRYPVE 189
AP+L +PGR +PV+
Sbjct: 630 GAPVLDIPGRTFPVQ 644
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 424 (154.3 bits), Expect = 3.6e-74, Sum P(3) = 3.6e-74
Identities = 109/329 (33%), Positives = 165/329 (50%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G ILVFL G + ++ P++++L +E Q +FV P G
Sbjct: 848 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVT 907
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ GMESL +S+A+A+QR GR+GR
Sbjct: 908 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN----FDFLDSP 393
G CF L+T + Y + +PEIQR L + L +K L + N F L P
Sbjct: 968 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEP 1027
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P GAL LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1028 PHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTI 1087
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KEN-DYSKQW 507
AA L+ S F P +KK A+ ++ F ++ D++ALL Y W KE S +
Sbjct: 1088 AASLAF-KSPFVSPWDKKEEANQKKLEFAFANS-DYLALLQAYKGWQLSTKEGVRASYNY 1145
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVG 536
C NF+ R ++ ++ Q T L+ +G
Sbjct: 1146 CRQNFLSGRVLQEMASLKRQFTELLSDIG 1174
Score = 375 (137.1 bits), Expect = 3.6e-74, Sum P(3) = 3.6e-74
Identities = 79/190 (41%), Positives = 113/190 (59%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT----KHGKVGC 59
+ER++LP + RE +L ++++QVVVI G TG GKTTQIPQ++ + K + C
Sbjct: 539 QERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIIC 598
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E ++G VGY IR E S T L Y T G++LR + D
Sbjct: 599 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTA 658
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L+ S ++VDE HERT +D LL + KD+V R L++++ SATL+AE FS YFN P++
Sbjct: 659 LQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVI 718
Query: 180 RVPGRRYPVE 189
+PGR +PV+
Sbjct: 719 TIPGRTFPVD 728
Score = 64 (27.6 bits), Expect = 3.6e-74, Sum P(3) = 3.6e-74
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 571 WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
+ K+ VH+HPSS QV +++YHE + T++ ++R
Sbjct: 1254 FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1295
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 434 (157.8 bits), Expect = 9.1e-74, Sum P(3) = 9.1e-74
Identities = 112/373 (30%), Positives = 186/373 (49%)
Query: 167 EKFSAYFNFAP-ILRVPGRRYPVE-IHYTKAPESNYIDAAIVTTL--EIHATQASGDILV 222
EK + Y P +R RRY + + E + +D ++ L I + G ILV
Sbjct: 434 EKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILV 493
Query: 223 FLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLA 282
FL G ++ K + ++ P+++ +PT Q ++F TP G RK+V+A
Sbjct: 494 FLPGWDNISTLHDLLMSQVM---FKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 550
Query: 283 TNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGK 342
TNIAETS+TID + YV+D G K ++ + + ++ +SKA+A QR GR+GR PG
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 610
Query: 343 CFRLYTINSYQEDM-EDNTVPEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQXXXX 399
C+ LY N + + +D +PEI RT L + L +K L + + F +D P
Sbjct: 611 CYHLY--NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVL 668
Query: 400 XXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVG 459
AL++ ELT +G +A P++P + KMI+ F C + ++TIAA LS
Sbjct: 669 LSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 728
Query: 460 NSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEND-----YSKQWCYDNFIQ 514
+ F P K+ +AD R + DH+ ++N + W+E Y K +C++ F+
Sbjct: 729 DP-FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLS 787
Query: 515 FRSMKHARDIRDQ 527
+++ +++ Q
Sbjct: 788 SNTLQMLHNMKGQ 800
Score = 351 (128.6 bits), Expect = 9.1e-74, Sum P(3) = 9.1e-74
Identities = 76/199 (38%), Positives = 115/199 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q R+ LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 200 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACR 258
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLG--HEVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G + GY IR + K + Y T G++L+
Sbjct: 259 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 318
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SDP L S S +++DE HER L +D+L+ + KDL+ RSDLK+++ SATL+AEKFS YF
Sbjct: 319 LQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 379 GNCPMIHIPGFTFPV-VEY 396
Score = 60 (26.2 bits), Expect = 9.1e-74, Sum P(3) = 9.1e-74
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 579 VHVHPSS-GLAQVP--KRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
V VHP S + Q W+IYH + T+ Y+ TE+ P L + KD
Sbjct: 867 VAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 922
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 435 (158.2 bits), Expect = 1.6e-73, Sum P(3) = 1.6e-73
Identities = 112/373 (30%), Positives = 187/373 (50%)
Query: 167 EKFSAYFNFAP-ILRVPGRRYPVE-IHYTKAPESNYIDAAIVTTL--EIHATQASGDILV 222
EK + Y P LR +RY + + + +D ++ L I + G ILV
Sbjct: 436 EKEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILV 495
Query: 223 FLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLA 282
FL G ++ K + I+ P+++ +PT Q ++F TP G RK+V+A
Sbjct: 496 FLPGWDNISTLHDLLMSQVM---FKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 552
Query: 283 TNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGK 342
TNIAETS+TID + YV+D G K ++ + + ++ +SKA+A QR GR+GR PG
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 612
Query: 343 CFRLYTINSYQEDM-EDNTVPEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQXXXX 399
C+ LY NS + + +D +PEI RT L + L +K L + + +F +D P
Sbjct: 613 CYHLY--NSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVL 670
Query: 400 XXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVG 459
AL++ ELT +G +A P++P + KMI+ F C + ++TIAA LS
Sbjct: 671 LSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 730
Query: 460 NSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEND-----YSKQWCYDNFIQ 514
+ F P K+ +AD R + DH+ ++N + W++ Y K +C++ F+
Sbjct: 731 DP-FVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLS 789
Query: 515 FRSMKHARDIRDQ 527
+++ +++ Q
Sbjct: 790 SNTLQMLHNMKGQ 802
Score = 347 (127.2 bits), Expect = 1.6e-73, Sum P(3) = 1.6e-73
Identities = 75/199 (37%), Positives = 115/199 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q+ R+ LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 202 MQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACR 260
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G+ GY IR + K + Y T G++L+
Sbjct: 261 IVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 320
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SDP L S S +++DE HER L +D+L+ + KDL+ R DLK+++ SATL+AEKFS YF
Sbjct: 321 LQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYF 380
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 381 GNCPMIHIPGFTFPV-VEY 398
Score = 60 (26.2 bits), Expect = 1.6e-73, Sum P(3) = 1.6e-73
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 575 HPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
HP+ V+V + + W+IYH + T+ Y+ TE+ P L + KD
Sbjct: 872 HPKSVNVEQT----EFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 924
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 421 (153.3 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 113/345 (32%), Positives = 174/345 (50%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G ILVFL G + ++ P++++L +E Q +FV P G
Sbjct: 800 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVT 859
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ GMESL +S+A+A+QR GR+GR
Sbjct: 860 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 919
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN----FDFLDSP 393
G CF L+T + Y + +PEIQR L + L +K L + N F L P
Sbjct: 920 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 979
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P GAL +LT +G +A P+D + K+++ F+C + +TI
Sbjct: 980 PHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTI 1039
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KENDY-SKQW 507
AA L+ S F P +KK A+ ++ F ++ D++ALL Y W KE+ S +
Sbjct: 1040 AASLAF-KSPFVSPWDKKEEANQKKLEFAFANS-DYLALLCAYKGWQLSTKESARASYNY 1097
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
C NF+ R+++ ++ Q T L+ +G + L E K+A
Sbjct: 1098 CRQNFLSGRTLQEMASLKRQFTELLSDIGF-VKEGLRAKEIEKRA 1141
Score = 369 (135.0 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 76/190 (40%), Positives = 113/190 (59%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT----KHGKVGC 59
+ER+ LP + RE +L+ + ++QVVVI G TG GKTTQIPQ++ + + + C
Sbjct: 490 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 549
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E ++G VGY IR E S T L Y T G++LR + D
Sbjct: 550 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 609
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L+ + ++VDE HERT +D LL + KD+V R+ L++++ SATLDA FS YF++ P++
Sbjct: 610 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVI 669
Query: 180 RVPGRRYPVE 189
+PGR +PV+
Sbjct: 670 TIPGRAFPVD 679
Score = 65 (27.9 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 563 RLQKNGSY--WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
RLQ + + K+ VH+HPSS QV +++YHE + T++ ++R
Sbjct: 1196 RLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1247
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 420 (152.9 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 113/345 (32%), Positives = 172/345 (49%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G ILVFL G + +V P++++L +E Q +FV P G
Sbjct: 844 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVT 903
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ GMESL +S+A+A+QR GR+GR
Sbjct: 904 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN----FDFLDSP 393
G CF L+T + + + +PEIQR L + L +K L + N F L P
Sbjct: 964 VASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 1023
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P GAL +LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1024 PHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTI 1083
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KEN-DYSKQW 507
AA L+ S F P +KK A+ ++ F ++ D++ALL Y W KE S +
Sbjct: 1084 AASLAF-KSPFVSPWDKKEEANQKKLEFAFANS-DYLALLRAYKGWQLSMKEGMRASYNY 1141
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
C NF+ R ++ ++ Q T L+ +G + L E K+A
Sbjct: 1142 CRQNFLSGRVLQEMASLKRQFTELLSDIGF-VKEGLRAREIEKRA 1185
Score = 371 (135.7 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 77/190 (40%), Positives = 115/190 (60%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT----KHGKVGC 59
+ER++LP + RE +L+ + E+QV+VI G TG GKTTQIPQ++ + + K + C
Sbjct: 535 QERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANIIC 594
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E ++G VGY IR E S T L Y T G++LR + D
Sbjct: 595 TQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTS 654
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L+ + ++VDE HERT +D LL + KD+V R +L++++ SATL+AE FS YF+ P++
Sbjct: 655 LQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVI 714
Query: 180 RVPGRRYPVE 189
+PGR +PV+
Sbjct: 715 TIPGRTFPVD 724
Score = 65 (27.9 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 571 WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
+ K+ VH+HPSS QV +++YHE + T++ ++R
Sbjct: 1250 FVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 421 (153.3 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 112/345 (32%), Positives = 174/345 (50%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G +LVFL G + ++ P++++L +E Q +FV P G
Sbjct: 850 GAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVT 909
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ GMESL +S+A+A+QR GR+GR
Sbjct: 910 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 969
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN----FDFLDSP 393
G CF L+T + Y + +PEIQR L + L +K L + N F L P
Sbjct: 970 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 1029
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P GAL +LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1030 PHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTI 1089
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KENDY-SKQW 507
AA L+ S F P +KK A+ ++ F ++ D++ALL Y W KE+ S +
Sbjct: 1090 AASLAF-KSPFVSPWDKKEEANQKKLEFAFANS-DYLALLCAYKGWQLSTKESARASYNY 1147
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
C NF+ R+++ ++ Q T L+ +G + L E K+A
Sbjct: 1148 CRQNFLSGRTLQEMASLKRQFTELLSDIGF-VKEGLRAKEIEKRA 1191
Score = 369 (135.0 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 76/190 (40%), Positives = 113/190 (59%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT----KHGKVGC 59
+ER+ LP + RE +L+ + ++QVVVI G TG GKTTQIPQ++ + + + C
Sbjct: 540 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 599
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E ++G VGY IR E S T L Y T G++LR + D
Sbjct: 600 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 659
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L+ + ++VDE HERT +D LL + KD+V R+ L++++ SATLDA FS YF++ P++
Sbjct: 660 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVI 719
Query: 180 RVPGRRYPVE 189
+PGR +PV+
Sbjct: 720 TIPGRAFPVD 729
Score = 65 (27.9 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 563 RLQKNGSY--WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
RLQ + + K+ VH+HPSS QV +++YHE + T++ ++R
Sbjct: 1246 RLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1297
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 421 (153.3 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 113/345 (32%), Positives = 174/345 (50%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G ILVFL G + ++ P++++L +E Q +FV P G
Sbjct: 853 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVT 912
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ GMESL +S+A+A+QR GR+GR
Sbjct: 913 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 972
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN----FDFLDSP 393
G CF L+T + Y + +PEIQR L + L +K L + N F L P
Sbjct: 973 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 1032
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P GAL +LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1033 PHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTI 1092
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KENDY-SKQW 507
AA L+ S F P +KK A+ ++ F ++ D++ALL Y W KE+ S +
Sbjct: 1093 AASLAF-KSPFVSPWDKKEEANQKKLEFAFANS-DYLALLCAYKGWQLSTKESARASYNY 1150
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
C NF+ R+++ ++ Q T L+ +G + L E K+A
Sbjct: 1151 CRQNFLSGRTLQEMASLKRQFTELLSDIGF-VKEGLRAKEIEKRA 1194
Score = 369 (135.0 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 76/190 (40%), Positives = 113/190 (59%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT----KHGKVGC 59
+ER+ LP + RE +L+ + ++QVVVI G TG GKTTQIPQ++ + + + C
Sbjct: 543 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIIC 602
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E ++G VGY IR E S T L Y T G++LR + D
Sbjct: 603 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 662
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L+ + ++VDE HERT +D LL + KD+V R+ L++++ SATLDA FS YF++ P++
Sbjct: 663 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVI 722
Query: 180 RVPGRRYPVE 189
+PGR +PV+
Sbjct: 723 TIPGRAFPVD 732
Score = 65 (27.9 bits), Expect = 3.5e-73, Sum P(3) = 3.5e-73
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 563 RLQKNGSY--WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
RLQ + + K+ VH+HPSS QV +++YHE + T++ ++R
Sbjct: 1249 RLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIR 1300
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 403 (146.9 bits), Expect = 6.9e-73, Sum P(3) = 6.9e-73
Identities = 109/304 (35%), Positives = 165/304 (54%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 897 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 956
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 957 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1015
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ +LT +G+ +A
Sbjct: 1016 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACELNEP-KLTPLGQHLAAL 1073
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1074 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFITPIGRKDEADLAKSALAMADS-D 1131
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
H+ + N Y WK E Y + +C NF+ S+ D++ +L LV+ G L+S
Sbjct: 1132 HLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGF-LSS 1190
Query: 542 SLCN 545
+ N
Sbjct: 1191 TTSN 1194
Score = 394 (143.8 bits), Expect = 6.9e-73, Sum P(3) = 6.9e-73
Identities = 87/202 (43%), Positives = 123/202 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R V+ ++ ++VVV+ GETGSGK+TQ+P +L +E G TK
Sbjct: 562 LLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCN 621
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 622 IV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D EKFS
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFS 740
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 741 TYFTHCPILRISGRSYPVEVFH 762
Score = 61 (26.5 bits), Expect = 6.9e-73, Sum P(3) = 6.9e-73
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVP-KRWVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E + + Y+R+ T + P
Sbjct: 1250 KAQVHPSSVNRDLQIYGWLLYQEKIRYARVYLRETTLITP 1289
Score = 40 (19.1 bits), Expect = 9.8e-35, Sum P(3) = 9.8e-35
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K DI ++L C+VE
Sbjct: 1222 YDNVGKIIYTKSV-DITEKLACIVE 1245
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 133/256 (51%), Positives = 193/256 (75%)
Query: 77 EMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTL 136
EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ YS +++DEAHER+L
Sbjct: 10 EMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSL 69
Query: 137 STDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAP 196
+TD+L G+ +++V RSDLKL+++SAT+DAEKF+++F PI +PGR +PV+I ++K P
Sbjct: 70 NTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTP 129
Query: 197 ESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPV 256
+ +Y++AA+ +L++H + A GDIL+F+ GQ + +L L V P+
Sbjct: 130 QEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPI 188
Query: 257 YANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGME 316
Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY K+K +NP+ GM+
Sbjct: 189 YSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMD 248
Query: 317 SLLVYPISKASAMQRA 332
+L +YPIS+A+A QR+
Sbjct: 249 ALQIYPISQANANQRS 264
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 404 (147.3 bits), Expect = 8.1e-73, Sum P(3) = 8.1e-73
Identities = 98/329 (29%), Positives = 165/329 (50%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G +LVFL G + +V P++++L E Q +F +G
Sbjct: 891 GAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVT 950
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ MESL +S+A+A+QR GR+GR
Sbjct: 951 KIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGR 1010
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGID-----DLLNFDFLDS 392
G CF L+T + ++ + +PEIQR L + L +K L + D + ++
Sbjct: 1011 VASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEP 1070
Query: 393 PPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P + GAL LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1071 PTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTI 1130
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW---KENDYSK--QW 507
AA L+ S F P +K+ A+ ++ F ++ DH+AL+ Y W ++ + Q+
Sbjct: 1131 AASLAF-KSPFVSPWDKREEANEKKLAFSLANS-DHLALMQAYKGWCNAAQSGFKAGYQY 1188
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVG 536
C +NF+ R ++ ++ Q L+ +G
Sbjct: 1189 CRENFLSIRGLQEIACLKRQFAELLSDIG 1217
Score = 392 (143.0 bits), Expect = 8.1e-73, Sum P(3) = 8.1e-73
Identities = 82/194 (42%), Positives = 117/194 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q++R+ LP + RE +L + +NQV+VI G TG GKTTQIPQ++ + + + G+
Sbjct: 575 MQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILD-NFLQTGRPDRVA 633
Query: 57 -VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
+ CTQP E LGH GY IR E S T L + T G++LR +
Sbjct: 634 NIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLE 693
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
DP+L + ++VDE HERT +D LL + KDL+ R+DLK+++ SATL+AE FS YFN
Sbjct: 694 GDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNN 753
Query: 176 APILRVPGRRYPVE 189
P + +PGR +PVE
Sbjct: 754 CPCIHIPGRTFPVE 767
Score = 62 (26.9 bits), Expect = 8.1e-73, Sum P(3) = 8.1e-73
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 579 VHVHPSS---GLAQVPKRWVIYHELVLTTKEYMR 609
VH+HPSS + +++YHE V T++ ++R
Sbjct: 1306 VHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIR 1339
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 195/648 (30%), Positives = 333/648 (51%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQ--VVVIVGETGSGKTTQIPQYLHE----AGYTKHG 55
L ++R++LP++ R L ++ + VV++ GE G GK+TQIPQ+ E G+ K G
Sbjct: 38 LLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQK-G 96
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
V TQP EM + LGHEVGYSI EDCT T+L++ D ++L+E+
Sbjct: 97 WVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVA 156
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKD--LVRLRSDLKLLISSATLDAEKFSAYF 173
S + VL++DEA ER++++D+L G+ +D L L DL++++ + K ++
Sbjct: 157 STRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVVTDPSLEPKLQDFW 216
Query: 174 NFAPILRVPGRR--YPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXX 231
P + VP + P ++ P ++ +DAA LE +A GD+LV+L +
Sbjct: 217 GGPPTVCVPRKTGSCPTPVYRDSLP-ADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEIS 275
Query: 232 XXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLT 291
++R L + V P++ +QA ++ T GARKVV+ +A+ S +
Sbjct: 276 LCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFS 334
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+ I++V+DSG Y+P+ ES ++ P+SK A R R+ PG C LY +
Sbjct: 335 LPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYPKSF 394
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGAL 411
+ + P + NL++++L+LK I + FLD P AL
Sbjct: 395 LELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAAL 454
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G+L+ +G ++EFPL P L+K ++AS +F C +E++T+AA+L+ F RP
Sbjct: 455 DDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP---V 510
Query: 472 LADNARMN-FYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTC 530
A+ A + + GDH +L+ VY ++ ++ K WC + + ++ AR +R +L
Sbjct: 511 CAEEAALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLE 570
Query: 531 LVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKVHVHPS- 584
L++R+ + L+ S N ++KA++SG+ L AR G+Y + H + P+
Sbjct: 571 LMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNC 630
Query: 585 ---SGLAQV-PKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
S A P WV+YH ++ + V+E++P+ L E+AP Y++
Sbjct: 631 CYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFL 678
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 417 (151.9 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 112/345 (32%), Positives = 171/345 (49%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G ILVFL G + ++ P++++L +E Q +FV P G
Sbjct: 843 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVT 902
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+ GMESL +S+A+A+QR GR+GR
Sbjct: 903 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 962
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLN----FDFLDSP 393
G CF L+T + + + +PEIQR L + L +K L + N F L P
Sbjct: 963 VASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEP 1022
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P GAL LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1023 PHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTI 1082
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KEN-DYSKQW 507
AA L+ S F P +KK A+ ++ F ++ D++ALL Y W KE S +
Sbjct: 1083 AASLAF-KSPFVSPWDKKEEANQKKLEFAFANS-DYLALLRAYKGWQLSMKEGMRASYNY 1140
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKKA 552
C NF+ R ++ ++ Q T L+ +G + L E K+A
Sbjct: 1141 CRQNFLSGRVLQEMASLKRQFTELLSDIGF-VKEGLRAREIEKRA 1184
Score = 370 (135.3 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 76/190 (40%), Positives = 113/190 (59%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT----KHGKVGC 59
+ER++LP + RE +L+ + ++QV+V+ G TG GKTTQIPQ++ + K + C
Sbjct: 532 QERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIIC 591
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E ++G VGY IR E S T L Y T G++LR + D
Sbjct: 592 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTA 651
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
L+ + ++VDE HERT +D LL + KD+V R L++++ SATL+AE FS YFN P++
Sbjct: 652 LQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVI 711
Query: 180 RVPGRRYPVE 189
+PGR +PV+
Sbjct: 712 TIPGRTFPVD 721
Score = 65 (27.9 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 571 WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
+ K+ VH+HPSS QV +++YHE + T++ ++R
Sbjct: 1250 FVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIR 1291
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 199/649 (30%), Positives = 332/649 (51%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQ--VVVIVGETGSGKTTQIPQYLHE----AGYTKHG 55
L K+R+ LPI+ R L ++ N VV++ GE GSGK+TQIPQ+ E G+ K G
Sbjct: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQK-G 96
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
+V TQP EM + LGHEVGYSI EDCT T+L++ D ++L+E+
Sbjct: 97 QVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVA 156
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKD--LVRLRSDLKLLISSATLDAEKFSAYF 173
S ++ VL++DEA ER++++D L G+ +D L +L DL++++ + K A++
Sbjct: 157 STRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFW 216
Query: 174 NFAPILRVP---GRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXX 230
PI+ +P G R P I++ P ++AA LE+ + GD+LVFL +
Sbjct: 217 GNPPIVHIPREPGER-PSPIYWDTIPPDR-VEAACQAVLELCRKELPGDVLVFLPSEEEI 274
Query: 231 XXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
+ L + V P++ + +QA V ARKVV+ +A+ S
Sbjct: 275 SLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA---VYEDMDARKVVVTHWLADFSF 331
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
++ I++V+DSG YNP+ E ++ PISK A R R+ PG C LY +
Sbjct: 332 SLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKS 391
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGA 410
+ + P + NL++++L+LK I + FLD P A
Sbjct: 392 FLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAA 451
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ G+L+ +G ++EFPL P L+K ++AS +F C +E++T+AA+L+ F RP
Sbjct: 452 LDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP--- 507
Query: 471 FLADNARMN-FYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLT 529
A+ A + + GDH +L+ VY ++ ++ + WC + + ++ A +R +L
Sbjct: 508 LSAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELL 567
Query: 530 CLVERVGIELT----SSLCNLEAMKKAIISGFLLHTAR-LQKNGSYW--TVKHPQKVHVH 582
L++R+ + L+ S N ++KA++SG+ L AR G+Y T KH ++ +
Sbjct: 568 ELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSSY 627
Query: 583 PSSGLAQVPKR---WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+ P R WV+YH ++ + V+E++P+ L E+AP Y++
Sbjct: 628 CCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYFL 676
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 198/652 (30%), Positives = 334/652 (51%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQ--VVVIVGETGSGKTTQIPQYLHEAGYTKH---GK 56
L ++R+ LPI+ R L ++ + VV++ GE GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
V TQP EM + LGHE+GYSI EDCT T+L++ D + L+E+ S
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRS---DLKLLISSATLDAEKFSAYF 173
++SVL++DEA ER++++D+L G+ +D RLR+ D +++I + + KF A++
Sbjct: 155 TRGPGAWSVLVLDEAQERSVASDLLQGLLRD-TRLRNLPGDPRVVIVTDSALEPKFQAFW 213
Query: 174 NFAPILRVPGRRYPVE---IHYTKAPESNYIDAAIVTTLEI-HATQASGDILVFLTGQXX 229
+P + VP R P E + Y ++ ++AA LE+ +A GD+LV+L +
Sbjct: 214 GNSPTVHVP--REPGENPTLTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEEE 271
Query: 230 XXXXXXXXXXRIRKLGTKIGELI-VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAET 288
+ L G L V P++ +Q ++ T RK+V+ +A+
Sbjct: 272 ISLCCESLSREMGMLAVP-GPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLADF 329
Query: 289 SLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYT 348
S ++ I++V+DSG YNP+ ES ++ ISK A R R+ PG C RLY+
Sbjct: 330 SFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLYS 389
Query: 349 INSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXX 408
++ + P++ NL++++L+LK I + FLD P
Sbjct: 390 KSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDYL 449
Query: 409 GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN 468
AL+ G+L+ +G ++EFPL P L+K ++AS +F C +E++T+AA+L+ F RP
Sbjct: 450 AALDDDGDLSDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP- 507
Query: 469 KKFLADNA--RMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRD 526
A A R D GDH +L+ VY ++ ++ + WC + + ++ AR +R
Sbjct: 508 --LCAGEAALRRGLEHAD-GDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRA 564
Query: 527 QLTCLVERVGIELT----SSLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKVHV 581
+L L++R+ + L+ S N ++KA++SG+ L AR G+Y + H +
Sbjct: 565 ELLELMQRIELPLSLPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQL 624
Query: 582 HP-----SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
P + P WV+YH ++ + V+E++PE L E+AP Y++
Sbjct: 625 SPYCVYRNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQPEMLVELAPPYFL 676
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 426 (155.0 bits), Expect = 1.9e-72, Sum P(2) = 1.9e-72
Identities = 109/343 (31%), Positives = 178/343 (51%)
Query: 215 QASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGE-LIVCPVYANLPTELQAKIFVPTP 273
+ G ILVFL G G + + + V P+++ + + Q +F P
Sbjct: 420 EPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPP 479
Query: 274 DGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAG 333
G RKV+++T IAETS+TID + YV++SG +K Y+ +T ++SL ++KA+ QR G
Sbjct: 480 AGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRG 539
Query: 334 RSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNF--DFLD 391
R+GR PG C+ L++ + ++ M+D PEI R+ L ++IL LK L IDD F ++
Sbjct: 540 RAGRVRPGICYNLFS-RAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLIN 598
Query: 392 SPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIIT 451
+P AL+Q G LT +G +A+ P+DP + KMI+ S F C + I +
Sbjct: 599 APNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITS 658
Query: 452 IAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYS---KQWC 508
AA LS S FY P K+ D + + DH+ + N +++++ YS + +C
Sbjct: 659 AAAALSF-KSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFC 717
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLEAMKK 551
Y NF+ +++ +++Q + L+ L SS C A K
Sbjct: 718 YKNFLSSMTLQQLERMKNQFSELLYNYKF-LASSNCKDAASNK 759
Score = 373 (136.4 bits), Expect = 1.9e-72, Sum P(2) = 1.9e-72
Identities = 78/202 (38%), Positives = 122/202 (60%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE----AGYTKHGKVGCTQ 61
RK LP Y + +++AV+ENQV++IVG TG GKTTQ+PQ L + G ++ CTQ
Sbjct: 150 RKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQ 209
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTS-EKTVLKYMTDGMVLREMLSDPKL 120
P E LG+ VGY IR E + E+ + Y T G++L+++ SDP +
Sbjct: 210 PRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLM 269
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
+ SVL++DE HER++ TD+L+G+ K ++ R DLK+++ SAT+ + F YFN P+ R
Sbjct: 270 HNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFR 329
Query: 181 VPGRRYPVEIHYTK--APESNY 200
+ G +PV++ Y + ++NY
Sbjct: 330 IEGVMFPVKMLYLEDVLSKTNY 351
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 394 (143.8 bits), Expect = 5.1e-72, Sum P(3) = 5.1e-72
Identities = 106/301 (35%), Positives = 162/301 (53%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 897 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 956
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 957 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1015
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ LT +G+ +A
Sbjct: 1016 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACELNEP-TLTPLGQHLAAL 1073
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1074 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMADS-D 1131
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
H+ + N Y WK E Y + +C NF+ S+ D++ +L LV+ G ++
Sbjct: 1132 HLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSST 1191
Query: 542 S 542
+
Sbjct: 1192 T 1192
Score = 390 (142.3 bits), Expect = 5.1e-72, Sum P(3) = 5.1e-72
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R ++ ++ ++VVV+ GETGSGK+TQ+P +L +E G +K
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 622 IV-CTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D+EKFS
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFS 740
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 741 TYFTHCPILRISGRSYPVEVFH 762
Score = 68 (29.0 bits), Expect = 5.1e-72, Sum P(3) = 5.1e-72
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E V T+ Y+R+ T + P
Sbjct: 1250 KAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1289
Score = 39 (18.8 bits), Expect = 7.8e-35, Sum P(3) = 7.8e-35
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K D+ ++L C+VE
Sbjct: 1222 YDNVGKIIYTKSV-DVTEKLACIVE 1245
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 394 (143.8 bits), Expect = 5.1e-72, Sum P(3) = 5.1e-72
Identities = 106/301 (35%), Positives = 162/301 (53%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ LT +G+ +A
Sbjct: 1019 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACELNEP-TLTPLGQHLAAL 1076
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1077 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMADS-D 1134
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
H+ + N Y WK E Y + +C NF+ S+ D++ +L LV+ G ++
Sbjct: 1135 HLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSST 1194
Query: 542 S 542
+
Sbjct: 1195 T 1195
Score = 390 (142.3 bits), Expect = 5.1e-72, Sum P(3) = 5.1e-72
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R ++ ++ ++VVV+ GETGSGK+TQ+P +L +E G +K
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 622 IV-CTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D+EKFS
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFS 740
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 741 TYFTHCPILRISGRSYPVEVFH 762
Score = 68 (29.0 bits), Expect = 5.1e-72, Sum P(3) = 5.1e-72
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E V T+ Y+R+ T + P
Sbjct: 1253 KAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1292
Score = 39 (18.8 bits), Expect = 7.8e-35, Sum P(3) = 7.8e-35
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K D+ ++L C+VE
Sbjct: 1225 YDNVGKIIYTKSV-DVTEKLACIVE 1248
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 417 (151.9 bits), Expect = 6.5e-72, Sum P(3) = 6.5e-72
Identities = 119/365 (32%), Positives = 188/365 (51%)
Query: 252 IVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNP 311
+V P+++ + TE Q F+ P G RK+VLATNIAET +TI + V+D+G + ++
Sbjct: 998 LVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDE 1057
Query: 312 KTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLAN 371
+ M L+ IS+A+A QR GR+GR G CF ++T + M D PE+ R +L +
Sbjct: 1058 RRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQD 1117
Query: 372 VIL---ILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFP 428
+ + I K GI++ L+ LD P AL Q +LT +G Q+A P
Sbjct: 1118 LAIRVKICKIGGIEETLS-KALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLARLP 1176
Query: 429 LDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDH 488
LD L K+I+ FKC + IT+AA+LS S F P ++ AD R+ F +GD+ D
Sbjct: 1177 LDVFLGKLILLGSIFKCLDMAITVAAILS-SKSPFVAPFGQRSQADTVRLGFRRGDS-DI 1234
Query: 489 IALLNVYNSWKE-------NDYSK-QWCYDNFIQFRSMKHARDIRDQL-TCLVERVGIEL 539
+ + N Y SWK N + Q+C NF+ +++ + D++ QL LV+ + +
Sbjct: 1235 LTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVDSKFLSM 1294
Query: 540 TSS-LCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGL-AQVPKRWVIY 597
T NL ++ A SG R +K + + PQ+V V+ + L +Q W Y
Sbjct: 1295 TEDERKNLSRLRYA--SG----GNRRRKQVFF---EMPQRVDVNSENDLVSQAVLSWSFY 1345
Query: 598 HELVL 602
+L++
Sbjct: 1346 PKLLV 1350
Score = 384 (140.2 bits), Expect = 6.5e-72, Sum P(3) = 6.5e-72
Identities = 81/197 (41%), Positives = 122/197 (61%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQ 61
+ R LP++ +REQVL AV ++QVV++ GETG GK+TQ+P +L H+ K K+ CT+
Sbjct: 686 RSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIYCTE 745
Query: 62 PXXXXXXXXXXXXXXEMGV---KLGHE---VGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
P E+G LG VGYSIR E TS +T L + T G+V+R +
Sbjct: 746 PRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLE 805
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
L + L++DE HER++ +D LL + K L+ R DLK+++ SAT+DA++FS Y +
Sbjct: 806 GSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDG 865
Query: 176 APILRVPGRRYPVEIHY 192
AP+L VPGR +PV++++
Sbjct: 866 APVLNVPGRTFPVQVNF 882
Score = 45 (20.9 bits), Expect = 6.5e-72, Sum P(3) = 6.5e-72
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 573 VKHPQKVHVHPSS---GLAQVPKRWVIYHELVLTTKEYMR--QVTELKP 616
V + Q + +H SS G ++ RW+ Y+ ++ +TK + + T ++P
Sbjct: 1362 VGNNQNISLHRSSVNRGHNEI--RWMSYYHMMQSTKSALNAHETTAVEP 1408
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 432 (157.1 bits), Expect = 8.1e-72, Sum P(3) = 8.1e-72
Identities = 110/373 (29%), Positives = 185/373 (49%)
Query: 167 EKFSAYFNFAP-ILRVPGRRYPVE-IHYTKAPESNYIDAAIVTTLEIHAT--QASGDILV 222
EK + Y P +R +RY + + + + +D ++ L H + G ILV
Sbjct: 548 EKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEEDGAILV 607
Query: 223 FLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLA 282
FL G ++ K ++ P+++ +PT Q ++F TP G RK+V+A
Sbjct: 608 FLPGWDNISTLHDLLMSQVM---FKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA 664
Query: 283 TNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGK 342
TNIAETS+TID + YV+D G K ++ + + ++ +SKA+A QR GR+GR PG
Sbjct: 665 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 724
Query: 343 CFRLYTINSYQEDM-EDNTVPEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQXXXX 399
C+ LY N + + +D +PEI RT L + L +K L + + F +D P
Sbjct: 725 CYHLY--NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVS 782
Query: 400 XXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVG 459
AL++ ELT +G +A P++P + KMI+ F C + ++TIAA LS
Sbjct: 783 LSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 842
Query: 460 NSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEND-----YSKQWCYDNFIQ 514
+ F P K+ +AD R + DH+ ++N + W+E Y K +C++ F+
Sbjct: 843 DP-FVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLS 901
Query: 515 FRSMKHARDIRDQ 527
+++ +++ Q
Sbjct: 902 SNTLQMLHNMKGQ 914
Score = 339 (124.4 bits), Expect = 8.1e-72, Sum P(3) = 8.1e-72
Identities = 74/199 (37%), Positives = 113/199 (56%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q R+ LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 314 MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACR 372
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G+ GY IR + K + Y T G++L+
Sbjct: 373 IVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 432
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SD L S S +++DE HER L +D+L+ + KDL+ R DLK+++ SATL+AEKFS YF
Sbjct: 433 LQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF 492
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 493 GNCPMIHIPGFTFPV-VEY 510
Score = 60 (26.2 bits), Expect = 8.1e-72, Sum P(3) = 8.1e-72
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 575 HPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
HP+ V+V + + W+IYH + T+ Y+ TE+ P L + KD
Sbjct: 984 HPKSVNVEQT----EFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 1036
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 434 (157.8 bits), Expect = 8.3e-72, Sum P(2) = 8.3e-72
Identities = 112/373 (30%), Positives = 186/373 (49%)
Query: 167 EKFSAYFNFAP-ILRVPGRRYPVE-IHYTKAPESNYIDAAIVTTL--EIHATQASGDILV 222
EK + Y P +R RRY + + E + +D ++ L I + G ILV
Sbjct: 348 EKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILV 407
Query: 223 FLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLA 282
FL G ++ K + ++ P+++ +PT Q ++F TP G RK+V+A
Sbjct: 408 FLPGWDNISTLHDLLMSQVM---FKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIA 464
Query: 283 TNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGK 342
TNIAETS+TID + YV+D G K ++ + + ++ +SKA+A QR GR+GR PG
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGH 524
Query: 343 CFRLYTINSYQEDM-EDNTVPEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQXXXX 399
C+ LY N + + +D +PEI RT L + L +K L + + F +D P
Sbjct: 525 CYHLY--NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVL 582
Query: 400 XXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVG 459
AL++ ELT +G +A P++P + KMI+ F C + ++TIAA LS
Sbjct: 583 LSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 642
Query: 460 NSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEND-----YSKQWCYDNFIQ 514
+ F P K+ +AD R + DH+ ++N + W+E Y K +C++ F+
Sbjct: 643 DP-FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLS 701
Query: 515 FRSMKHARDIRDQ 527
+++ +++ Q
Sbjct: 702 SNTLQMLHNMKGQ 714
Score = 351 (128.6 bits), Expect = 8.3e-72, Sum P(2) = 8.3e-72
Identities = 76/199 (38%), Positives = 115/199 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q R+ LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 114 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACR 172
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLG--HEVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G + GY IR + K + Y T G++L+
Sbjct: 173 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 232
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SDP L S S +++DE HER L +D+L+ + KDL+ RSDLK+++ SATL+AEKFS YF
Sbjct: 233 LQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 292
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 293 GNCPMIHIPGFTFPV-VEY 310
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 422 (153.6 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
Identities = 106/329 (32%), Positives = 169/329 (51%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G +L+FL G +V P++++L +E Q +F+ P G
Sbjct: 841 GAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVI 900
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++++TNIAETS+TID + YV+DSG K K Y+P GMESL +S+A+A+QR GR+GR
Sbjct: 901 KIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGR 960
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVIL---ILKNLGIDDLLN-FDFLDSP 393
G CF L++ + Y + +PEIQR L + L IL+ L + L P
Sbjct: 961 VASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEP 1020
Query: 394 PQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITI 452
P+ GAL +LT +G +A P+D + K+++ F+C + +TI
Sbjct: 1021 PRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTI 1080
Query: 453 AALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSW----KENDY-SKQW 507
AA L+ S F P +K+ A+ +++F G++ D++ALL Y W KE S +
Sbjct: 1081 AASLAF-KSPFVSPWDKREEANKKKLDFAVGNS-DYLALLQAYKGWRLSTKEGSQASYNY 1138
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVG 536
C +NF+ R ++ ++ Q T L+ +G
Sbjct: 1139 CRENFLSGRVLQEIASLKRQFTELLSDIG 1167
Score = 357 (130.7 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
Identities = 76/189 (40%), Positives = 110/189 (58%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH----GKVGCT 60
ER+ LP + RE +L + +QV+V+ G TG GKTTQIPQ++ +A + CT
Sbjct: 533 ERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICT 592
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QP E ++G VGY IR E S T L Y T G++LR + D L
Sbjct: 593 QPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTL 652
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
+ + ++VDE HERT +D LL + KD++ R DL++++ SATL+AE FS YF+ PI+
Sbjct: 653 QGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIIN 712
Query: 181 VPGRRYPVE 189
+PGR +PV+
Sbjct: 713 IPGRTFPVD 721
Score = 61 (26.5 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 571 WTVKHPQKVHVHPSSGLAQV---PKRWVIYHELVLTTKEYMR 609
+ K+ VH+HPSS Q +++YHE + T++ ++R
Sbjct: 1248 FVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIR 1289
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 394 (143.8 bits), Expect = 3.2e-71, Sum P(4) = 3.2e-71
Identities = 83/200 (41%), Positives = 122/200 (61%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG----KVGC 59
KER+ LP++ +R ++ +++++VVV+ GETGSGK+TQ+P +L E G + C
Sbjct: 569 KERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVC 628
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMVLREM 114
TQP E+G + G GY IR E T E T L Y T G++LR++
Sbjct: 629 TQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKL 688
Query: 115 LSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN 174
D L S S ++VDE HER++ +D LL I K+++ RSDL L++ SAT+D+EKFS+YF
Sbjct: 689 QEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFA 748
Query: 175 FAPILRVPGRRYPVEIHYTK 194
PILR+ GR YPVE+ + +
Sbjct: 749 HCPILRISGRSYPVEVFHVE 768
Score = 378 (138.1 bits), Expect = 3.2e-71, Sum P(4) = 3.2e-71
Identities = 104/292 (35%), Positives = 157/292 (53%)
Query: 256 VYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGM 315
+++ L T+ QA F P G RK+VLATNIAET +TI + +V+DSG +K Y+ + M
Sbjct: 905 LHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQM 964
Query: 316 ESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVIL- 374
SL +SKASA+QR GR+GR G CFR+YT + ++ ME +VPEI R L + L
Sbjct: 965 SSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCLH 1023
Query: 375 ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEFPLD 430
I+K NLG +D L+ LD P GA LN+ +LT +G+ +A P++
Sbjct: 1024 IMKCNLGSPEDFLS-RALDPPQPQVIGNAMNLLRKIGACQLNEP-KLTPLGQHLAALPVN 1081
Query: 431 PMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIA 490
+ KM++ F C + + T+AA+++ S F P +K AD A+ + DH+
Sbjct: 1082 VKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSSIALA-VSDHLT 1139
Query: 491 LLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
+ N Y WK E + + +C NF+ S+ D++ +L LV G
Sbjct: 1140 IYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAG 1191
Score = 68 (29.0 bits), Expect = 3.2e-71, Sum P(4) = 3.2e-71
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E V K Y+R+ T + P
Sbjct: 1255 KAQVHPSSVNRDLQVHGWLLYQEKVRYAKVYLRETTLISP 1294
Score = 44 (20.5 bits), Expect = 3.2e-71, Sum P(4) = 3.2e-71
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K DI ++L CLVE
Sbjct: 1227 YDNVGKIMYTKSV-DITEKLACLVE 1250
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 389 (142.0 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 84/202 (41%), Positives = 122/202 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R+ ++ ++ ++VVV+ GETGSGK+TQ+P +L E G K
Sbjct: 564 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCN 623
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 624 IV-CTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVL 682
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D++KFS
Sbjct: 683 LRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFS 742
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 743 TYFTHCPILRISGRSYPVEVFH 764
Score = 388 (141.6 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 110/335 (32%), Positives = 172/335 (51%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G +L+FL G R+ ++ ++I +++ L T+ QA F+ P G R
Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSD-RRFYSERYQVIA--LHSVLSTQDQAAAFMFPPPGVR 923
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K+VLATNIAET +TI + +V+D+G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 924 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVIL-ILK-NLGI-DDLLNFDFLDSPP 394
G CFRLYT + E D +VPEI R L + L I+K +LG +D L+ LD P
Sbjct: 984 VRDGFCFRLYTRERF-EGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLS-KALDPPQ 1041
Query: 395 QXXXXXXXXXXXXXGALN-QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIA 453
GA +LT +G+ +A P++ + KM++ F C + T+A
Sbjct: 1042 LQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1101
Query: 454 ALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWK----ENDYSKQ--W 507
A+++ S F P +K AD A+ + D+ DH+ + N Y WK E + + +
Sbjct: 1102 AVMTE-KSPFITPIGRKDEADLAKSSLAVADS-DHLTIYNAYLGWKKAQQEGGFRSEISY 1159
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS 542
C NF+ S+ D++ +L LV+ G + S
Sbjct: 1160 CQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPS 1194
Score = 68 (29.0 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E V T+ Y+R+ T + P
Sbjct: 1249 KAQVHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1288
Score = 38 (18.4 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 295 IKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKC 343
+K V +G+S + + G ++L I+ A+ AG G C
Sbjct: 1181 MKLVKAAGFSSSPSWEGRKGPQTLSFQDIALLKAVLAAGLYDSVGKIMC 1229
Score = 37 (18.1 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YD+ + K D+ ++L C+VE
Sbjct: 1221 YDSVGKIMCTKSV-DVTEKLACMVE 1244
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 397 (144.8 bits), Expect = 4.8e-71, Sum P(3) = 4.8e-71
Identities = 107/306 (34%), Positives = 165/306 (53%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ +LT +G+ +A
Sbjct: 1019 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACELNEP-KLTPLGQHLAAL 1076
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1077 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMADS-D 1134
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
H+ + N Y WK E Y + +C NF+ S+ D++ +L LV+ G ++
Sbjct: 1135 HLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSST 1194
Query: 542 SLCNLE 547
+ + E
Sbjct: 1195 TSTSWE 1200
Score = 381 (139.2 bits), Expect = 4.8e-71, Sum P(3) = 4.8e-71
Identities = 82/201 (40%), Positives = 122/201 (60%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGK-- 56
L KER+ LP++ +R+ ++ ++ ++VVV+ GETGSGK+TQ+P +L E + K
Sbjct: 565 LLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCN 624
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMVL 111
+ CTQP E+G + G GY IR E E T L Y T G++L
Sbjct: 625 IVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLL 684
Query: 112 REMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSA 171
R++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D+EKFS
Sbjct: 685 RKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFST 744
Query: 172 YFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 745 YFTHCPILRISGRSYPVEVFH 765
Score = 64 (27.6 bits), Expect = 4.8e-71, Sum P(3) = 4.8e-71
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E + + Y+R+ T + P
Sbjct: 1253 KAQVHPSSVNRDLQTHGWLLYQEKIRYARVYLRETTLITP 1292
Score = 39 (18.8 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K D+ ++L C+VE
Sbjct: 1225 YDNVGKIIYTKSV-DVTEKLACIVE 1248
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 429 (156.1 bits), Expect = 7.4e-71, Sum P(2) = 7.4e-71
Identities = 122/417 (29%), Positives = 204/417 (48%)
Query: 197 ESNYIDAAIVTTL--EIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVC 254
+ + +D ++ L I + G ILVFL G ++ K + ++
Sbjct: 459 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFLII 515
Query: 255 PVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTG 314
P+++ +PT Q ++F TP G RK+V+ATNIAETS+TID + YV+D G K ++ +
Sbjct: 516 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 575
Query: 315 MESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDM-EDNTVPEIQRTNLANVI 373
+ ++ +SKA+A QR GR+GR PG C+ LY N + + +D +PEI RT L +
Sbjct: 576 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLY--NGLRASLLDDYQLPEILRTPLEELC 633
Query: 374 LILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDP 431
L +K L + + F +D P AL++ ELT +G +A P++P
Sbjct: 634 LQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEP 693
Query: 432 MLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIAL 491
+ KMI+ F C + ++TIAA LS + F P K+ +AD R + DH+ +
Sbjct: 694 HIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKETRSDHLTV 752
Query: 492 LNVYNSWKEND-----YSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS---- 542
+N + W+E Y K +C++ F+ +++ +++ Q + G + S
Sbjct: 753 VNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDP 812
Query: 543 LCNL----EAMKKAII-SGFLLHTARLQKNGSYWTVKHPQKVHVHPSS-GLAQV-PK 592
N+ E + KA+I +G A+++ N K + V VH S GL + PK
Sbjct: 813 KANINSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVHTKSDGLVSIHPK 865
Score = 355 (130.0 bits), Expect = 7.4e-71, Sum P(2) = 7.4e-71
Identities = 76/199 (38%), Positives = 116/199 (58%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q+ RK LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 193 MQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACR 251
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G+ GY IR + K + Y T G++L+
Sbjct: 252 IVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 311
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SD +L S S +++DE HER L +D+L+ + KDL+ RSDLK+++ SATL+AEKFS YF
Sbjct: 312 LQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYF 371
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 372 GNCPMIHIPGFTFPV-VEY 389
Score = 63 (27.2 bits), Expect = 6.6e-31, Sum P(2) = 6.6e-31
Identities = 27/96 (28%), Positives = 42/96 (43%)
Query: 545 NLEAMKKAIISGFLLHTARLQKN-GSYWT-VK-HPQK---VHVHPSS-GLAQVP--KRWV 595
N + +K I +G A+++ N G VK H + V +HP S + Q W+
Sbjct: 820 NEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWL 879
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
IYH + T+ Y+ TE+ P L + KD
Sbjct: 880 IYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 915
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 429 (156.1 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 125/430 (29%), Positives = 207/430 (48%)
Query: 185 RYPVE-IHYTKAPESNYIDAAIVTTL--EIHATQASGDILVFLTGQXXXXXXXXXXXXRI 241
RY I + + + +D ++ L I + G ILVFL G ++
Sbjct: 445 RYSASTIDVLEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 504
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
K ++ P+++ +PT Q ++F TP G RK+V+ATNIAETS+TID + YV+D
Sbjct: 505 M---FKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDG 561
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDM-EDNT 360
G K ++ + + ++ +SKA+A QR GR+GR PG C+ LY N + + +D
Sbjct: 562 GKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLY--NGLRASLLDDYQ 619
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELT 418
+PEI RT L + L +K L + + F +D P AL++ ELT
Sbjct: 620 LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELT 679
Query: 419 KVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARM 478
+G +A P++P + KMI+ F C + ++TIAA LS + F P K+ +AD R
Sbjct: 680 PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRK 738
Query: 479 NFYQGDAGDHIALLNVYNSWKEND-----YSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
+ DH+ ++N + W+E Y K +C++ F+ +++ +++ Q +
Sbjct: 739 ELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 798
Query: 534 RVGIELTSS----LCNL----EAMKKAII-SGFLLHTARLQKNGSYWTVKHPQKVHVHPS 584
G + S N+ E + KA+I +G A+++ N K + V VH
Sbjct: 799 GAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLNLG----KKRKMVKVHTK 854
Query: 585 S-GLAQV-PK 592
S GL + PK
Sbjct: 855 SDGLVSIHPK 864
Score = 352 (129.0 bits), Expect = 1.5e-70, Sum P(2) = 1.5e-70
Identities = 75/199 (37%), Positives = 116/199 (58%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-----K 56
+Q+ RK LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + G +
Sbjct: 192 MQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGIGSACR 250
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G+ GY IR + K + Y T G++L+
Sbjct: 251 IVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 310
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SD +L S S +++DE HER L +D+L+ + KDL+ RSDLK+++ SATL+AEKFS YF
Sbjct: 311 LQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYF 370
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 371 GNCPMIHIPGFTFPV-VEY 388
Score = 63 (27.2 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 27/96 (28%), Positives = 42/96 (43%)
Query: 545 NLEAMKKAIISGFLLHTARLQKN-GSYWT-VK-HPQK---VHVHPSS-GLAQVP--KRWV 595
N + +K I +G A+++ N G VK H + V +HP S + Q W+
Sbjct: 819 NEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWL 878
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
IYH + T+ Y+ TE+ P L + KD
Sbjct: 879 IYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 914
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 421 (153.3 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 102/341 (29%), Positives = 173/341 (50%)
Query: 197 ESNYIDAAIVTTLEIHAT--QASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVC 254
+ + +D ++ L H + G ILVFL G ++ K I+
Sbjct: 447 DDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFIII 503
Query: 255 PVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTG 314
P+++ +PT Q ++F TP G RK+V+ATNIAETS+TID + +V+D G K ++ +
Sbjct: 504 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNN 563
Query: 315 MESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDM-EDNTVPEIQRTNLANVI 373
+ ++ +SKA+A QR GR+GR PG C+ LY N + + +D +PEI RT L +
Sbjct: 564 ISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLY--NGLRASLLDDYQLPEILRTPLEELC 621
Query: 374 LILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDP 431
L +K L + + F +D P + AL++ ELT +G +A P++P
Sbjct: 622 LQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEP 681
Query: 432 MLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIAL 491
+ KMI+ F C + ++TIAA LS + F P K+ +AD R + DH+ +
Sbjct: 682 HIGKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKVADARRKELSKNTKSDHLTV 740
Query: 492 LNVYNSWKENDY-----SKQWCYDNFIQFRSMKHARDIRDQ 527
+N + W+E K +C++ F+ +++ +++ Q
Sbjct: 741 VNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQ 781
Score = 340 (124.7 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 77/201 (38%), Positives = 116/201 (57%)
Query: 2 LQKERKTLPIYHYRE--QVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK--- 56
+Q+ R+ LP Y R+ +++ + N+V VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 179 MQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKGST 237
Query: 57 --VGCTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVL 111
+ CTQP E G+ GY IR + K + Y T G+VL
Sbjct: 238 CRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVL 297
Query: 112 REMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSA 171
+ + SD L S S +++DE HER L +D+L+ I KDL+ +R DLK+++ SATL+AEKFS
Sbjct: 298 QWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSE 357
Query: 172 YFNFAPILRVPGRRYPVEIHY 192
YF+ P++ +PG +PV + Y
Sbjct: 358 YFDNCPMIHIPGFTFPV-VEY 377
Score = 60 (26.2 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 579 VHVHPSSGLAQVPK---RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
V++HP S + + W++YH + T+ Y+ TE+ P L + KD
Sbjct: 848 VNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 903
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 391 (142.7 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 110/335 (32%), Positives = 173/335 (51%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G +L+FL G R+ ++ +LI +++ L T+ QA F+ P G R
Sbjct: 868 GAVLIFLPG-LAHIQQLYDLLSNDRRFYSERYQLIA--LHSVLSTQDQAAAFMLPPPGVR 924
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K+VLATNIAET +TI + +V+D+G +K Y+ + M SL+ +SKASA+QR GR+GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVIL-ILK-NLGI-DDLLNFDFLDSPP 394
G CFRLYT ++ +E +VPEI R L + L I+K +LG +D L+ LD P
Sbjct: 985 VRDGFCFRLYTRERFEGFLE-YSVPEILRVPLEELCLHIMKCDLGSPEDFLS-KALDPPQ 1042
Query: 395 QXXXXXXXXXXXXXGALN-QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIA 453
GA +LT +G+ +A P++ + KM++ F C + T+A
Sbjct: 1043 PQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1102
Query: 454 ALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWK----ENDYSKQ--W 507
A+++ S F P +K AD A+ + D+ DH+ + N Y WK E + + +
Sbjct: 1103 AVMTE-KSPFITPIGRKDEADLAKSSLAVADS-DHLTIYNAYLGWKKAQQEGGFRSEISY 1160
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS 542
C NF+ S+ D++ +L LV G ++S
Sbjct: 1161 CQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTS 1195
Score = 384 (140.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 85/213 (39%), Positives = 127/213 (59%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R ++ ++ ++VVV+ GETGSGK+TQ+P +L ++ G K
Sbjct: 565 LLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCN 624
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 625 IV-CTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVL 683
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D++KFS
Sbjct: 684 LRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFS 743
Query: 171 AYFNFAPILRVPGRRYPVEIHYTK--APESNYI 201
YF PILR+ GR YPVE+ + + E+ +I
Sbjct: 744 TYFTHCPILRISGRSYPVEVFHLEDIVEETGFI 776
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E V + Y+R+ T + P
Sbjct: 1250 KAQVHPSSVNRDLQTYGWLLYQEKVRYARVYLRETTLITP 1289
Score = 40 (19.1 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 295 IKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKC 343
+K V +G+S + K G ++L I+ A+ AG G C
Sbjct: 1182 MKLVRAAGFSSSTSWEGKKGPQALSFQDIALLKAVLAAGLYDSVGKIMC 1230
Score = 37 (18.1 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YD+ + K D+ ++L C+VE
Sbjct: 1222 YDSVGKIMCTKSV-DVTEKLACMVE 1245
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 390 (142.3 bits), Expect = 3.0e-70, Sum P(4) = 3.0e-70
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R ++ ++ ++VVV+ GETGSGK+TQ+P +L +E G +K
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 622 IV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D+EKFS
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFS 740
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 741 TYFTHCPILRISGRSYPVEVFH 762
Score = 385 (140.6 bits), Expect = 3.0e-70, Sum P(4) = 3.0e-70
Identities = 104/294 (35%), Positives = 160/294 (54%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ +LT +G+ +A
Sbjct: 1019 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMHLLRKIGACELNEP-KLTPLGQHLAAL 1076
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1077 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMADS-D 1134
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIRDQLTCLVERV 535
H+ + N Y WK E Y + +C NF+ S+ +I+ + T L++ +
Sbjct: 1135 HLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRTTLLKLI 1188
Score = 62 (26.9 bits), Expect = 3.0e-70, Sum P(4) = 3.0e-70
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E + + Y+R+ T + P
Sbjct: 1250 KAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1289
Score = 39 (18.8 bits), Expect = 3.0e-70, Sum P(4) = 3.0e-70
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K D+ ++L C+VE
Sbjct: 1222 YDNVGKIIYTKSV-DVTEKLACIVE 1245
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 390 (142.3 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R ++ ++ ++VVV+ GETGSGK+TQ+P +L +E G +K
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 622 IV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D+EKFS
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFS 740
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 741 TYFTHCPILRISGRSYPVEVFH 762
Score = 377 (137.8 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 102/284 (35%), Positives = 154/284 (54%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ +LT +G+ +A
Sbjct: 1019 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMHLLRKIGACELNEP-KLTPLGQHLAAL 1076
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1077 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMADS-D 1134
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSMKHARDIR 525
H+ + N Y WK E Y + +C NF+ S+ +I+
Sbjct: 1135 HLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIK 1178
Score = 62 (26.9 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E + + Y+R+ T + P
Sbjct: 1253 KAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1292
Score = 39 (18.8 bits), Expect = 2.1e-69, Sum P(4) = 2.1e-69
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K D+ ++L C+VE
Sbjct: 1225 YDNVGKIIYTKSV-DVTEKLACIVE 1248
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 189/646 (29%), Positives = 326/646 (50%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQ--VVVIVGETGSGKTTQIPQYLHEAGYT---KHGK 56
L ++R+ LPI+ R L ++ + VV++ GE GSGK+TQIPQ+ E K G+
Sbjct: 38 LLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGR 97
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
V TQP EM + LG EVGYSI EDCT T+L++ D ++L+E+ S
Sbjct: 98 VTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVAS 157
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKD--LVRLRSDLKLLISSATLDAEKFSAYFN 174
++ VL++DEA ER++++D+L G+ ++ L L D ++++ + K A++
Sbjct: 158 TRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVVTDPALEPKLQAFWG 217
Query: 175 FAPILRVP-GR-RYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXX 232
I+ VP G P ++ P ++ ++AA LE+ A +A GD+LV+L +
Sbjct: 218 NPTIVHVPRGPGACPTPVYRDIVP-TDRVEAACQAVLELCAKEAPGDVLVYLPSEEEILQ 276
Query: 233 XXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTI 292
+ L + V P++ +QA + GARKVV+ +A+ S ++
Sbjct: 277 CCESLSREVEPLALRGPPPRVLPLHPGHGPAVQAA-YEDIDLGARKVVVTHWLADFSFSL 335
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
I++V+DSG YNP+ ES ++ PIS+ A R R+ PG C LY +
Sbjct: 336 PSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGSCICLYPESFL 395
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN 412
+ + P + NL+ ++L+LK I + FLD P AL+
Sbjct: 396 ELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYLAALD 455
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G L+ +G ++EFPL P L+K ++AS +F C +E++T+AA+L+ + P + +
Sbjct: 456 DDGNLSDLGVILSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPPLSAEEA 515
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
A R D GDH +L+ VY ++ ++ + WC + + ++ A+ +R +L L+
Sbjct: 516 A--LRRALEHAD-GDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLELM 572
Query: 533 ERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKVHVHPSSGL 587
+++ + L+ S N ++KA++SG+ L AR G+Y + H + P
Sbjct: 573 QQIELPLSQPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCCY 632
Query: 588 A--QVPKR---WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+ P R WV+YH ++ + V+E++P+ L E+AP Y++
Sbjct: 633 RSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFL 678
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 390 (142.3 bits), Expect = 4.2e-69, Sum P(4) = 4.2e-69
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL------HEAGYTKHG 55
L KER+ LP++ +R ++ ++ ++VVV+ GETGSGK+TQ+P +L +E G +K
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 56 KVGCTQPXXXXXXXXXXXXXXEMGVKLGHE-----VGYSIRFEDCTSEKTVLKYMTDGMV 110
V CTQP E+G + G GY IR E SE T L Y T G++
Sbjct: 622 IV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 111 LREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFS 170
LR++ D L + S ++VDE HER++ +D LL I K++++ RSDL L++ SAT+D+EKFS
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFS 740
Query: 171 AYFNFAPILRVPGRRYPVEIHY 192
YF PILR+ GR YPVE+ +
Sbjct: 741 TYFTHCPILRISGRSYPVEVFH 762
Score = 374 (136.7 bits), Expect = 4.2e-69, Sum P(4) = 4.2e-69
Identities = 101/277 (36%), Positives = 151/277 (54%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
V +++ L T+ QA F P G RK+VLATNIAET +TI + +V+D+G +K Y+
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
+ M SL+ +SKASA+QR GR+GR G CFR+YT ++ M D +VPEI R L +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 373 IL-ILK-NLGI-DDLLNFDFLDSPPQXXXXXXXXXXXXXGA--LNQVGELTKVGRQMAEF 427
L I+K NLG +D L+ LD P GA LN+ +LT +G+ +A
Sbjct: 1019 CLHIMKCNLGSPEDFLS-KALDPPQLQVISNAMHLLRKIGACELNEP-KLTPLGQHLAAL 1076
Query: 428 PLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGD 487
P++ + KM++ F C + + T+AA+++ S F P +K AD A+ D+ D
Sbjct: 1077 PVNVKIGKMLIFGAIFGCLDPVATLAAVMTE-KSPFTTPIGRKDEADLAKSALAMADS-D 1134
Query: 488 HIALLNVYNSWK----ENDYSKQ--WCYDNFIQFRSM 518
H+ + N Y WK E Y + +C NF+ S+
Sbjct: 1135 HLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSL 1171
Score = 62 (26.9 bits), Expect = 4.2e-69, Sum P(4) = 4.2e-69
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVPKR-WVIYHELVLTTKEYMRQVTELKP 616
K VHPSS + W++Y E + + Y+R+ T + P
Sbjct: 1253 KAQVHPSSVNRDLQTYGWLLYQEKIRYARVYLRETTLITP 1292
Score = 39 (18.8 bits), Expect = 4.2e-69, Sum P(4) = 4.2e-69
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 509 YDNFIQFRSMKHARDIRDQLTCLVE 533
YDN + K D+ ++L C+VE
Sbjct: 1225 YDNVGKIIYTKSV-DVTEKLACIVE 1248
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 177/607 (29%), Positives = 301/607 (49%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LP++ R + ++ +Q+V++ G+ +GK++Q+PQ+ E A +HG
Sbjct: 65 LMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV 124
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
C+Q EM V +GHEVGY + FE C + +T+L+Y TD M+ REM+S P
Sbjct: 125 CSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAP 184
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HERT+ TD+LLG+ K ++R R L+L+I +A + K + P+
Sbjct: 185 LLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPL 244
Query: 179 LRVPGRRYPVEIHYT-KAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXX 237
+RV + E+ YT P+ +++ +A+ E+H T+ GDI++FL +
Sbjct: 245 IRVENE-HQAEVVYTCSMPKDHFL-SALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMI 302
Query: 238 XXRIRKLGTKIGELIVCPVYAN----LPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
+GELI P+Y +P Q K RKV+L T+ + + I
Sbjct: 303 RQEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKC-YQKYRRKVLLTTSSGGSLIRIK 361
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +V+D G + K YNP+ +S+ PISKA A + GK F LY
Sbjct: 362 NITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYPEEFTY 421
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSP--PQXXXXXXXXXXXXXGAL 411
++M+ + +IQ +NL +++L LK + I + +FL P P
Sbjct: 422 KEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAKHGIRSTGKTHQTR 481
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
Q G ++ F + + + F C E++ I LL N + P +
Sbjct: 482 RQ-GSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPSGTEE 540
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE---NDY-----SKQWCYDNFIQFRSMKHARD 523
+A F AGDH L+NV+N+++E N +++WC + F+ +++ A
Sbjct: 541 IALTCWRKFSH-PAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRMAEM 599
Query: 524 IRDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQK 578
IR +L +++R+ + +++ S N ++KKA++SG+ + AR + +G+Y + H Q
Sbjct: 600 IRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLTHRQV 659
Query: 579 VHVHPSS 585
+HP S
Sbjct: 660 AKLHPFS 666
Score = 370 (135.3 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 99/368 (26%), Positives = 174/368 (47%)
Query: 277 RKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSG 336
RKV+L T+ + + I I +V+D G + K YNP+ +S+ PISKA A
Sbjct: 345 RKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILS 404
Query: 337 RTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSP--P 394
+ GK F LY ++M+ + +IQ +NL +++L LK + I + +FL P P
Sbjct: 405 TSPSGKLFCLYPEEFTYKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCP 464
Query: 395 QXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAA 454
Q G ++ F + + + F C E++ I
Sbjct: 465 PSAKHGIRSTGKTHQTRRQ-GSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHV 523
Query: 455 LLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKE---NDY-----SKQ 506
LL N + P + +A F AGDH L+NV+N+++E N +++
Sbjct: 524 LLHAPNCFLHTPSGTEEIALTCWRKFSH-PAGDHFTLINVFNAFREASTNSAGQCCSNEK 582
Query: 507 WCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTA 562
WC + F+ +++ A IR +L +++R+ + +++ S N ++KKA++SG+ + A
Sbjct: 583 WCRNYFLSCSALRMAEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIA 642
Query: 563 R-LQKNGSYWTVKHPQKVHVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWL 619
R + +G+Y + H Q +HP S + WV++HE ++ +R V+E+ P
Sbjct: 643 RDVDGSGNYLMLTHRQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLF 702
Query: 620 FEIAPHYY 627
E+AP YY
Sbjct: 703 VELAPQYY 710
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 124/223 (55%), Positives = 169/223 (75%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPX 63
++R++LPI+ +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQP
Sbjct: 470 EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 529
Query: 64 XXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 530 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 589
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 590 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 649
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTG 226
R YPVEI YTK PE++Y+DA+++T ++IH T+ G+ +V + G
Sbjct: 650 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 408 (148.7 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 112/330 (33%), Positives = 170/330 (51%)
Query: 201 IDAAIVTTLEIHA--TQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYA 258
ID ++ L H T G IL+FL G R G L+ P+++
Sbjct: 897 IDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLL--PLHS 954
Query: 259 NLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESL 318
++ + Q K+F+ P G RKV+ ATNIAETS+TID + YV+DSG K YNP+ + S+
Sbjct: 955 SIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSM 1014
Query: 319 LVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKN 378
+ IS+A+A QR GR+GR PG CF LYT +++ M VPE+ R L + L +K
Sbjct: 1015 VEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKL 1074
Query: 379 LGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKM 436
LG+ + F L+ P + GA+ ELT +G +A+ P+D ++ KM
Sbjct: 1075 LGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKM 1134
Query: 437 IVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYN 496
++ F C + I++IAA LS S F PK++K D ++ D G + LN N
Sbjct: 1135 LLYGGIFGCLSPILSIAAFLSY-KSPFIYPKDEKQNVDRVKLALLS-DNGVSSSDLN--N 1190
Query: 497 SWKENDYSKQW-CYDNFI---QFRSMKHAR 522
+ +++D+ YD ++ Q R MK A+
Sbjct: 1191 NDRQSDHLLMMVAYDKWVKILQERGMKAAQ 1220
Score = 321 (118.1 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 79/214 (36%), Positives = 119/214 (55%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE----AGYTKHGKVGC 59
K R LPI + +L+ ++E V+V+ GETGSGKTTQ+PQ++ + +G+ + + C
Sbjct: 609 KTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIIC 668
Query: 60 TQPXXXXXXXXXXXXXXEMGVKL-GHE---VGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
TQP E G + VGY +R E S+KT L + T G++LR++
Sbjct: 669 TQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLA 728
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRS-D-----LKLLISSATLDAEKF 169
D L + ++VDE HER+L D LL I K L+ +S D LK+++ SAT+DA+ F
Sbjct: 729 GDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLF 788
Query: 170 SAYFNFAPILRVPGRRYPVEIHYTKAP-ES-NYI 201
S YF P++ GR +PV H+ + ES NY+
Sbjct: 789 SRYFGHCPVITAQGRTHPVTTHFLEEIYESINYL 822
Score = 63 (27.2 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 566 KNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHELVLTTKEYMRQVTELKP 616
K+ S W ++VH+HPSS ++++ E V T K Y+R T + P
Sbjct: 1325 KSYSAW-YDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1377
Score = 60 (26.2 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 487 DHIALLNVYNSW----KENDY--SKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI 537
DH+ ++ Y+ W +E ++++C F+ M+ RD+R Q L+ +G+
Sbjct: 1196 DHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGL 1252
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 386 (140.9 bits), Expect = 8.1e-67, Sum P(3) = 8.1e-67
Identities = 88/270 (32%), Positives = 145/270 (53%)
Query: 266 AKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISK 325
+++F TP G RK+V+ATNIAETS+TID + YV+D G K ++ + + ++ +SK
Sbjct: 520 SQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 579
Query: 326 ASAMQRAGRSGRTGPGKCFRLYTINSYQEDM-EDNTVPEIQRTNLANVILILKNLGIDDL 384
A+A QR GR+GR PG C+ LY N + + +D +PEI RT L + L +K L + +
Sbjct: 580 ANAKQRKGRAGRVQPGHCYHLY--NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 637
Query: 385 LNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDK 442
F +D P AL++ ELT +G +A P++P + KMI+
Sbjct: 638 AYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGAL 697
Query: 443 FKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEND 502
F C + ++TIAA LS + F P K+ +AD R + DH+ ++N + W+E
Sbjct: 698 FCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEAR 756
Query: 503 -----YSKQWCYDNFIQFRSMKHARDIRDQ 527
Y K +C++ F+ +++ +++ Q
Sbjct: 757 RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 786
Score = 351 (128.6 bits), Expect = 8.1e-67, Sum P(3) = 8.1e-67
Identities = 76/199 (38%), Positives = 115/199 (57%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q R+ LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 200 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACR 258
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLG--HEVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G + GY IR + K + Y T G++L+
Sbjct: 259 IVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 318
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SDP L S S +++DE HER L +D+L+ + KDL+ RSDLK+++ SATL+AEKFS YF
Sbjct: 319 LQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYF 378
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 379 GNCPMIHIPGFTFPV-VEY 396
Score = 60 (26.2 bits), Expect = 8.1e-67, Sum P(3) = 8.1e-67
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 579 VHVHPSS-GLAQVP--KRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
V VHP S + Q W+IYH + T+ Y+ TE+ P L + KD
Sbjct: 853 VAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 908
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 435 (158.2 bits), Expect = 8.6e-67, Sum P(3) = 8.6e-67
Identities = 120/335 (35%), Positives = 168/335 (50%)
Query: 210 EIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIF 269
E+ Q SG IL+FL G +R L L V P++A+L T+ Q K+F
Sbjct: 880 ELSLAQKSGGILIFLPG----VAEINRACGMLRSLNC----LHVLPLHASLETKEQRKVF 931
Query: 270 VPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAM 329
VP P G RKVV+ATN+AETS+TID I VVD+G K Y+ M L S A+
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 330 QRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNF-D 388
QR GR+GR G+C++LYT + M + PE++R L + L ++ +GI D+ F
Sbjct: 992 QRRGRAGRVQAGECYKLYT-RKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLA 1050
Query: 389 FLDSPPQXXXXXXXXXXXXX-GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
+PP+ G L+ ELT +GRQ+A P D K++V F C
Sbjct: 1051 RAPTPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLAAIPADLRCGKLMVYGAVFGCLE 1109
Query: 448 EIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKE--NDYSK 505
+ +++AALLS G VF P +K+ A AR F GD GD + L + +W D S
Sbjct: 1110 DCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGD-GDLLTDLRAFQAWDAMMRDPSV 1168
Query: 506 Q------WCYDNFIQFRSMKHARDIRDQ-LTCLVE 533
Q +C DNF+ + ++ R Q T LVE
Sbjct: 1169 QQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVE 1203
Score = 308 (113.5 bits), Expect = 8.6e-67, Sum P(3) = 8.6e-67
Identities = 75/204 (36%), Positives = 118/204 (57%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK---HG-KVGCT 60
+R+ LP + R++++R V E+QV +I GETGSGK+TQ Q++ + Y + H + T
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVT 688
Query: 61 QPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREM-LSDPK 119
QP E ++G EVGY IR E T KT + ++T G++LR + +S +
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGR 748
Query: 120 LESY-------SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAY 172
+E S +++DE HER+L TD LL I +D+++ R DLKL++ SATLD+ F++Y
Sbjct: 749 VEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASY 808
Query: 173 FNFAPI----LRVPGRRYPVEIHY 192
F I + + GR +PV +Y
Sbjct: 809 FVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 43 (20.2 bits), Expect = 8.6e-67, Sum P(3) = 8.6e-67
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 578 KVHVHPSSGLAQVP-----KRWVIYHELVLTTKEYMRQVT 612
+V VHPSS L ++ Y ++ T+K ++R +T
Sbjct: 1282 RVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLT 1321
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 387 (141.3 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 88/269 (32%), Positives = 144/269 (53%)
Query: 267 KIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKA 326
++F TP G RK+V+ATNIAETS+TID + YV+D G K ++ + + ++ +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 327 SAMQRAGRSGRTGPGKCFRLYTINSYQEDM-EDNTVPEIQRTNLANVILILKNLGIDDLL 385
+A QR GR+GR PG C+ LY N + + +D +PEI RT L + L +K L + +
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLY--NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA 632
Query: 386 NF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKF 443
F +D P AL++ ELT +G +A P++P + KMI+ F
Sbjct: 633 YFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 692
Query: 444 KCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKEND- 502
C + ++TIAA LS + F P K+ +AD R + DH+ ++N + W+E
Sbjct: 693 CCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARR 751
Query: 503 ----YSKQWCYDNFIQFRSMKHARDIRDQ 527
Y K +C++ F+ +++ +++ Q
Sbjct: 752 RGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 780
Score = 339 (124.4 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 74/199 (37%), Positives = 113/199 (56%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK----- 56
+Q R+ LP Y +++++ + +QV VI GETG GKTTQ+ Q++ + Y + GK
Sbjct: 194 MQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACR 252
Query: 57 VGCTQPXXXXXXXXXXXXXXEMGVKLGH--EVGYSIRFEDCTSEKT-VLKYMTDGMVLRE 113
+ CTQP E G+ GY IR + K + Y T G++L+
Sbjct: 253 IVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 312
Query: 114 MLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYF 173
+ SD L S S +++DE HER L +D+L+ + KDL+ R DLK+++ SATL+AEKFS YF
Sbjct: 313 LQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF 372
Query: 174 NFAPILRVPGRRYPVEIHY 192
P++ +PG +PV + Y
Sbjct: 373 GNCPMIHIPGFTFPV-VEY 390
Score = 60 (26.2 bits), Expect = 1.1e-65, Sum P(3) = 1.1e-65
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 575 HPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
HP+ V+V + + W+IYH + T+ Y+ TE+ P L + KD
Sbjct: 850 HPKSVNVEQT----EFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD 902
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 381 (139.2 bits), Expect = 5.6e-65, Sum P(2) = 5.6e-65
Identities = 103/326 (31%), Positives = 165/326 (50%)
Query: 212 HATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVP 271
H A G IL+FL G ++ V +++N+ T Q K+
Sbjct: 617 HGCDA-GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKN 675
Query: 272 TPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQR 331
P G RK++L+TNIAETS+T++ + +V+DSG K K ++ + L + ISKASA+QR
Sbjct: 676 PPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQR 735
Query: 332 AGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL- 390
GR+GR PG CFRL++ +Q +E T PE+ R L + L K L + DFL
Sbjct: 736 KGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLM 794
Query: 391 ---DSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
+ PP A++ +LT++G +A+ P++P L KM++ + KC +
Sbjct: 795 KAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLD 854
Query: 448 EIITIAALLSVGNSVFYRPK--NKKFLADNARMNFYQGDAGDHIALLNVYNSWKE---ND 502
I+TIA L+ + F P ++K A R F G DH+ALL + +W++ +
Sbjct: 855 PILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG 913
Query: 503 YSKQWCYDNFIQFRSMKHARDIRDQL 528
+ + +C NF+ +M+ +R QL
Sbjct: 914 WERAFCEKNFLSQATMEIIIGMRTQL 939
Score = 358 (131.1 bits), Expect = 5.6e-65, Sum P(2) = 5.6e-65
Identities = 73/188 (38%), Positives = 118/188 (62%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVGCTQP 62
R++LP++ +E++++ ++EN+VV+IVGETGSGKTTQIPQ+L + + K+G ++ CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS-DPKLE 121
E ++G +GY IR E S KT+L + T+G++LR +++ D L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ + ++VDE HER +D LL +DL++ LKL++SSA LD F YF P++ +
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 367
Query: 182 PGRRYPVE 189
GR + V+
Sbjct: 368 QGRPFEVK 375
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 386 (140.9 bits), Expect = 6.3e-65, Sum P(3) = 6.3e-65
Identities = 103/326 (31%), Positives = 167/326 (51%)
Query: 212 HATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVP 271
H+ +A G IL+FL G ++ V +++N+ T Q K+
Sbjct: 617 HSCEA-GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKN 675
Query: 272 TPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQR 331
P G RK++L+TNIAETS+T++ + +V+DSG K K ++ + L + ISKASA+QR
Sbjct: 676 PPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 735
Query: 332 AGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL- 390
GR+GR PG CFRL++ +Q +E T PE+ R L + L K L + DFL
Sbjct: 736 KGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCAIADFLM 794
Query: 391 ---DSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
+ PP A++ +LT++G +A+ P++P L KM++ + KC +
Sbjct: 795 KAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLD 854
Query: 448 EIITIAALLSVGNSVFYRPK--NKKFLADNARMNFYQGDAGDHIALLNVYNSWKE---ND 502
I+TIA L+ + F P ++K A R F G DH+ALL + +W++ +
Sbjct: 855 PILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG 913
Query: 503 YSKQWCYDNFIQFRSMKHARDIRDQL 528
+ + +C NF+ +M+ +R QL
Sbjct: 914 WERAFCEKNFLSQATMEIIIGMRTQL 939
Score = 358 (131.1 bits), Expect = 6.3e-65, Sum P(3) = 6.3e-65
Identities = 73/188 (38%), Positives = 118/188 (62%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVGCTQP 62
R++LP++ +E++++ ++EN+VV+IVGETGSGKTTQIPQ+L + + K+G ++ CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS-DPKLE 121
E ++G +GY IR E S KT+L + T+G++LR +++ D L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ + ++VDE HER +D LL +DL++ LKL++SSA LD F YF P++ +
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 367
Query: 182 PGRRYPVE 189
GR + V+
Sbjct: 368 QGRPFEVK 375
Score = 183 (69.5 bits), Expect = 3.4e-43, Sum P(3) = 3.4e-43
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
+Q L +L N I D L + PP A++ +LT++G
Sbjct: 772 LQELCLHTKLLAPVNCAIADFL-MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYH 830
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK--NKKFLADNARMNFY 481
+A+ P++P L KM++ + KC + I+TIA L+ + F P ++K A R F
Sbjct: 831 LADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFT 889
Query: 482 QGDAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI- 537
G DH+ALL + +W++ + + + +C NF+ +M+ +R QL + G
Sbjct: 890 AGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFV 949
Query: 538 ---------ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
++ ++ N +K A+++G H + + +KV HP+S L+
Sbjct: 950 RARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHVDRENVVLAGPKEKKVRFHPTSVLS 1009
Query: 589 Q 589
Q
Sbjct: 1010 Q 1010
Score = 43 (20.2 bits), Expect = 6.3e-65, Sum P(3) = 6.3e-65
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 573 VKHPQKVHVHPSSG----LAQVPKRWVIYHEL 600
+ PQ + P++G + +P W+IY E+
Sbjct: 1008 LSQPQYKKIPPANGQTAAIQALPTDWLIYDEM 1039
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 384 (140.2 bits), Expect = 9.4e-65, Sum P(3) = 9.4e-65
Identities = 103/326 (31%), Positives = 166/326 (50%)
Query: 212 HATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVP 271
H+ A G IL+FL G ++ V +++N+ T Q K+
Sbjct: 633 HSCDA-GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKN 691
Query: 272 TPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQR 331
P G RK++L+TNIAETS+T++ + +V+DSG K K ++ + L + ISKASA+QR
Sbjct: 692 PPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 751
Query: 332 AGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL- 390
GR+GR PG CFRL++ +Q +E T PE+ R L + L K L + DFL
Sbjct: 752 KGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCTIADFLM 810
Query: 391 ---DSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
+ PP A++ +LT++G +A+ P++P L KM++ + KC +
Sbjct: 811 KAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLD 870
Query: 448 EIITIAALLSVGNSVFYRPK--NKKFLADNARMNFYQGDAGDHIALLNVYNSWKE---ND 502
I+TIA L+ + F P ++K A R F G DH+ALL + +W++ +
Sbjct: 871 PILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG 929
Query: 503 YSKQWCYDNFIQFRSMKHARDIRDQL 528
+ + +C NF+ +M+ +R QL
Sbjct: 930 WERAFCEKNFLSQATMEIIIGMRTQL 955
Score = 358 (131.1 bits), Expect = 9.4e-65, Sum P(3) = 9.4e-65
Identities = 73/188 (38%), Positives = 118/188 (62%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVGCTQP 62
R++LP++ +E++++ ++EN+VV+IVGETGSGKTTQIPQ+L + + K+G ++ CTQP
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 263
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS-DPKLE 121
E ++G +GY IR E S KT+L + T+G++LR +++ D L
Sbjct: 264 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 323
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ + ++VDE HER +D LL +DL++ LKL++SSA LD F YF P++ +
Sbjct: 324 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 383
Query: 182 PGRRYPVE 189
GR + V+
Sbjct: 384 QGRPFEVK 391
Score = 179 (68.1 bits), Expect = 7.3e-43, Sum P(3) = 7.3e-43
Identities = 59/241 (24%), Positives = 108/241 (44%)
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
+Q L +L N I D L + PP A++ +LT++G
Sbjct: 788 LQELCLHTKLLAPVNCTIADFL-MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYH 846
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK--NKKFLADNARMNFY 481
+A+ P++P L KM++ + KC + I+TIA L+ + F P ++K A R F
Sbjct: 847 LADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFT 905
Query: 482 QGDAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI- 537
G DH+ALL + +W++ + + + +C NF+ +M+ +R QL + G
Sbjct: 906 AGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFV 965
Query: 538 ---------ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
++ ++ N +K A+++G + + + T +KV HP+S L+
Sbjct: 966 RARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVILTGPKEKKVRFHPTSVLS 1025
Query: 589 Q 589
Q
Sbjct: 1026 Q 1026
Score = 44 (20.5 bits), Expect = 9.4e-65, Sum P(3) = 9.4e-65
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 573 VKHPQKVHVHPSSGLAQ----VPKRWVIYHEL 600
+ PQ + P++G A +P W+IY E+
Sbjct: 1024 LSQPQYKKIPPANGQAAAIQALPTDWLIYDEM 1055
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 389 (142.0 bits), Expect = 2.6e-64, Sum P(2) = 2.6e-64
Identities = 117/377 (31%), Positives = 180/377 (47%)
Query: 193 TKAPESNYIDAAIVTTL--EIHATQASGDILVFLTG-QXXXXXXXXXXXXRIRKLGTKIG 249
T PE +D ++ L +I + G ILVFL G + R K
Sbjct: 551 TIKPEE--VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKF- 607
Query: 250 ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWY 309
+I+C +++ +P E Q K+F P G RK+VLATNIAE+++TID + YV+DSG K K Y
Sbjct: 608 -IILC-LHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSY 665
Query: 310 NPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNL 369
+P + +L +SKA+A QRAGR+GR G C+ LY+ + + VPE+ R +
Sbjct: 666 DPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYS-KLRAASLPEYRVPEVMRMPV 724
Query: 370 ANVILILK----NLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
+ L +K N ++D L +D P GAL ELT++G++
Sbjct: 725 DELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFG 783
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN----KKFLADNARMNFY 481
+ P+ P +SKMI + C + + +A + F P + KK A +
Sbjct: 784 QLPVHPRISKMIYFAILVNCLDPALILACAADEKDP-FTMPLSPGDRKKAAAAKHELASL 842
Query: 482 QGDAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG-I 537
GD DH+A + + WK + +K++C FI MK D+ +L + R G I
Sbjct: 843 YGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVI 902
Query: 538 ELTSSLCNLEAMKKAII 554
+SS C+L A I+
Sbjct: 903 PSSSSNCSLNAHDPGIL 919
Score = 349 (127.9 bits), Expect = 2.6e-64, Sum P(2) = 2.6e-64
Identities = 75/193 (38%), Positives = 111/193 (57%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHG-KVGCTQP 62
R LPI +R+ ++ AV+ NQVV+I GETG GKTTQ+PQYL H K K+ CTQP
Sbjct: 214 RSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQP 273
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS---DPK 119
E G +G VGY +R + ++ + + T+G++LR ++ +
Sbjct: 274 RRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSS 333
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
+ + ++VDE HER +D +L I +DL+ L+L++ SATLDAE+FS YF P++
Sbjct: 334 VPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVV 393
Query: 180 RVPGRRYPVEIHY 192
RVPG YPV +
Sbjct: 394 RVPGFTYPVRTFF 406
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 380 (138.8 bits), Expect = 2.8e-64, Sum P(3) = 2.8e-64
Identities = 102/326 (31%), Positives = 166/326 (50%)
Query: 212 HATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVP 271
H+ A G +L+FL G ++ V +++N+ T Q K+
Sbjct: 618 HSCDA-GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKN 676
Query: 272 TPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQR 331
P G RK++L+TNIAETS+T++ + +V+DSG K K ++ + L + ISKASA+QR
Sbjct: 677 PPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 736
Query: 332 AGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL- 390
GR+GR PG CFRL++ +Q +E T PE+ R L + L K L + DFL
Sbjct: 737 KGRAGRCRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLM 795
Query: 391 ---DSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSN 447
+ PP A++ +LT++G +A+ P++P L KM++ + KC +
Sbjct: 796 KAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLD 855
Query: 448 EIITIAALLSVGNSVFYRPK--NKKFLADNARMNFYQGDAGDHIALLNVYNSWKE---ND 502
I+TIA L+ + F P ++K A R F G DH+ALL + +W++ +
Sbjct: 856 PILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDG 914
Query: 503 YSKQWCYDNFIQFRSMKHARDIRDQL 528
+ + +C NF+ +M+ +R QL
Sbjct: 915 WERAFCEKNFLSQATMEIIIGMRTQL 940
Score = 358 (131.1 bits), Expect = 2.8e-64, Sum P(3) = 2.8e-64
Identities = 73/188 (38%), Positives = 118/188 (62%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVGCTQP 62
R++LP++ +E++++ ++EN+VV+IVGETGSGKTTQIPQ+L + + K+G ++ CTQP
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 248
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS-DPKLE 121
E ++G +GY IR E S KT+L + T+G++LR +++ D L
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ + ++VDE HER +D LL +DL++ LKL++SSA LD F YF P++ +
Sbjct: 309 TVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYI 368
Query: 182 PGRRYPVE 189
GR + V+
Sbjct: 369 QGRPFEVK 376
Score = 178 (67.7 bits), Expect = 8.9e-43, Sum P(3) = 8.9e-43
Identities = 59/241 (24%), Positives = 108/241 (44%)
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
+Q L +L N I D L + PP A++ +LT++G
Sbjct: 773 LQELCLHTKLLAPVNCPIADFL-MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYH 831
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK--NKKFLADNARMNFY 481
+A+ P++P L KM++ + KC + I+TIA L+ + F P ++K A R F
Sbjct: 832 LADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDP-FVLPTQASQKRAAMLCRKRFT 890
Query: 482 QGDAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI- 537
G DH+ALL + +W++ + + + +C NF+ +M+ +R QL + G
Sbjct: 891 AGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFV 950
Query: 538 ---------ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
++ ++ N +K A+++G + + + T +KV HP+S L+
Sbjct: 951 RARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLS 1010
Query: 589 Q 589
Q
Sbjct: 1011 Q 1011
Score = 44 (20.5 bits), Expect = 2.8e-64, Sum P(3) = 2.8e-64
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 573 VKHPQKVHVHPSSGLAQ----VPKRWVIYHEL 600
+ PQ + P++G A +P W+IY E+
Sbjct: 1009 LSQPQYKKIPPANGQAAAIKALPTDWLIYDEM 1040
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 405 (147.6 bits), Expect = 7.6e-64, Sum P(3) = 7.6e-64
Identities = 105/316 (33%), Positives = 161/316 (50%)
Query: 198 SNYIDAAIVTTLEIHA--TQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCP 255
S +D ++ L H T G ILVFL G R G G+ ++ P
Sbjct: 861 SAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGAS-GDWLL-P 918
Query: 256 VYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGM 315
+++++ + Q K+F+ P G RKV++ATNIAETS+TI+ + YV+DSG K YNP +
Sbjct: 919 LHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKL 978
Query: 316 ESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILI 375
S++ +SKA+A QR GR+GR PG CF LYT + +++ M VPE+ R L + L
Sbjct: 979 SSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLH 1038
Query: 376 LKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPML 433
+K LG+ + F L+ P + GAL ELT +G +A+ P+D ++
Sbjct: 1039 IKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLI 1098
Query: 434 SKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK--------FLADN--ARMNFYQG 483
KM++ F C + I++IAA LS S F K+++ L+D + N
Sbjct: 1099 GKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNN 1158
Query: 484 DA-GDHIALLNVYNSW 498
D DH+ ++ Y W
Sbjct: 1159 DRQSDHLLMVVAYEKW 1174
Score = 319 (117.4 bits), Expect = 7.6e-64, Sum P(3) = 7.6e-64
Identities = 72/200 (36%), Positives = 115/200 (57%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE----AGYTKHGKVGC 59
K R LPI ++ +L+ ++E V+V+ GETGSGKTTQ+PQ++ + +G+ + + C
Sbjct: 592 KTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIIC 651
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEV-GYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
TQP E + V Y +R ++ S+KT L + T G++LR+++ D
Sbjct: 652 TQPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDT 711
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRS-D-----LKLLISSATLDAEKFSAY 172
L+ + ++VDE HER+L D LL I K L+ +S D LK+++ SAT+DA +FS Y
Sbjct: 712 TLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRY 771
Query: 173 FNFAPILRVPGRRYPVEIHY 192
F PI+ GR +PV ++
Sbjct: 772 FGQCPIITAQGRTHPVTTYF 791
Score = 48 (22.0 bits), Expect = 7.6e-64, Sum P(3) = 7.6e-64
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 487 DHIALLNVYNSW----KENDY--SKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGI 537
DH+ ++ Y W E + ++ +C F+ M+ R+ R + L+ +G+
Sbjct: 1163 DHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGL 1219
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 401 (146.2 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 115/357 (32%), Positives = 176/357 (49%)
Query: 201 IDAAIVTTLEIHATQA----SGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVC-P 255
I+ +V +L +H ILVF+ G I I + I C P
Sbjct: 877 INLDVVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVP 936
Query: 256 VYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGM 315
++++L + Q K+F P+G KVV+ATNIAETS+TI+ ++ VVD G +N TG
Sbjct: 937 LHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGN 996
Query: 316 ESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLA----N 371
+ SKAS QRAGR+GRT G CF+++T S + ++D PEI RT+L +
Sbjct: 997 SVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFT-KSMESQLQDQDTPEILRTSLQQLCLH 1055
Query: 372 VILILKN---LGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALN----QVGELTKVGRQM 424
V L LKN I D LN ++ P AL Q ELT +G +
Sbjct: 1056 VKLFLKNNKNTTIQDFLN-RAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGYHL 1114
Query: 425 AEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGD 484
A P+D + KM++ F+C + I+TIAA L+ S F P +K + F +
Sbjct: 1115 ASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNY-KSPFLNPPDKTIRPMD---KFSSPN 1170
Query: 485 AGDHIALLNVYNSWKE-----NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
DH L+N YNSW++ N+Y Q+C +N++ +++ +D++ Q ++ +G
Sbjct: 1171 QSDHQTLINAYNSWRKSIQDGNEY--QFCRENYLSIPTLRTIQDLKLQFVEILSEIG 1225
Score = 324 (119.1 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 82/234 (35%), Positives = 125/234 (53%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKH-GK---VGC 59
K+R++LP++ +++ L+ +QENQVVVI ETG GK+TQIPQY+ E+ ++ G + C
Sbjct: 620 KKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVC 679
Query: 60 TQPXXXXXXXXXXXXXXEMGV-----KLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREM 114
TQP E +G VGY IR E S+ T L + T G++LR +
Sbjct: 680 TQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRI 739
Query: 115 LSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN 174
L + S +++DE HER+ D LL I ++++ R DLK+++ SATL+A++ + YF
Sbjct: 740 LDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFK 799
Query: 175 FAP--ILRVPGRRYPVEIHYTKA--P-----ESNYIDAAIVTTLEIHATQASGD 219
I +PG +PV+ Y P NY D+ I TT T + D
Sbjct: 800 CTDDSIFSIPGFTFPVKNIYINEVLPLINKYNPNYKDS-ITTTTTTTTTTTTND 852
Score = 58 (25.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 36/140 (25%), Positives = 56/140 (40%)
Query: 489 IALLNVYNSWKENDYSKQWCYDNFIQF--RSMKHARDIRDQLTCL-----VERVGI-ELT 540
IA L K N+YS C D F+ + S I + C + R+ +
Sbjct: 1236 IAKLQQQQQQKGNNYSND-CIDEFVGYIYNSNSSKSKIITSVLCAGMYPKIARIDYPDAK 1294
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV----I 596
S A+K LL L K + K ++V +HP S + + WV I
Sbjct: 1295 YSQTASGAIKNKYSPESLL---LLTKPPNCGPGKPLERVFIHPRSTNFKEGE-WVYPFII 1350
Query: 597 YHELVLTTKEYMRQVTELKP 616
Y++ V T+K ++ +T L P
Sbjct: 1351 YNDKVKTSKLFLHHITNLSP 1370
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 371 (135.7 bits), Expect = 6.1e-63, Sum P(2) = 6.1e-63
Identities = 132/464 (28%), Positives = 215/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 652 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 711
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+TI+
Sbjct: 712 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITIN 767
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 768 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 826
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 827 EKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 885
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 886 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 943
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + + W+E D S + Y +N + S++
Sbjct: 944 RAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1003
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 1004 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1061
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1062 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1100
Score = 353 (129.3 bits), Expect = 6.1e-63, Sum P(2) = 6.1e-63
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 514
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 515 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 574
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 575 SLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 634
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 635 IKVPGFMYPVKEHY 648
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 366 (133.9 bits), Expect = 6.8e-63, Sum P(3) = 6.8e-63
Identities = 75/188 (39%), Positives = 122/188 (64%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVGCTQP 62
R++LP++ +E++++ ++EN+VV+IVGETGSGKTTQIPQ+L + Y ++G ++ CTQP
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCY-ENGVPCRIFCTQP 158
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS-DPKLE 121
E K+G VGY IR E S +T+L + T+G++LR +++ D L
Sbjct: 159 RRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALS 218
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+ + ++VDE HER +D LL +D+++ +++LKL+ISSA LDA F YF P++ +
Sbjct: 219 TVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVIHI 278
Query: 182 PGRRYPVE 189
GR + V+
Sbjct: 279 QGRPFEVK 286
Score = 365 (133.5 bits), Expect = 6.8e-63, Sum P(3) = 6.8e-63
Identities = 104/356 (29%), Positives = 174/356 (48%)
Query: 191 HYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK-LGTKIG 249
H++ E +D + I + G IL+FL G ++ +
Sbjct: 506 HHSFDDEKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHS 565
Query: 250 ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWY 309
+ V +++N+ T Q + P G RK++L+TNIAETS+T++ + +V+DSG K K +
Sbjct: 566 KYQVFMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSF 625
Query: 310 NPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNL 369
+ + + L ISKASA+QR GR+GR PG CF L++ +Q +E T PE++R L
Sbjct: 626 DALSCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQT-PELRRMPL 684
Query: 370 ANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMA 425
+ L K L + DFL D PP A++ +LT++G +A
Sbjct: 685 QELCLHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLA 744
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK--NKKFLADNARMNFYQG 483
E P++P L KM++ + KC + I+TIA L+ + F P ++K A R G
Sbjct: 745 ELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDP-FVLPTVASQKRAAMLCRKRLAAG 803
Query: 484 DAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
DH+ LL + +W++ + + + +C NF+ +M+ +R QL + +G
Sbjct: 804 TFSDHMVLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALG 859
Score = 172 (65.6 bits), Expect = 9.9e-43, Sum P(3) = 9.9e-43
Identities = 60/241 (24%), Positives = 106/241 (43%)
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQ 423
+Q L +L N + D L D PP A++ +LT++G
Sbjct: 684 LQELCLHTKLLAPVNCPVVDFL-MKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYH 742
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPK--NKKFLADNARMNFY 481
+AE P++P L KM++ + KC + I+TIA L+ + F P ++K A R
Sbjct: 743 LAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDP-FVLPTVASQKRAAMLCRKRLA 801
Query: 482 QGDAGDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE----- 533
G DH+ LL + +W++ + + + +C NF+ +M+ +R QL +
Sbjct: 802 AGTFSDHMVLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFV 861
Query: 534 --RVGIELTSSLCNLE---AMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
R G ++ N E +K A+++G + + + T +KV HP+S L+
Sbjct: 862 RARGGADIRDVNVNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLS 921
Query: 589 Q 589
Q
Sbjct: 922 Q 922
Score = 39 (18.8 bits), Expect = 6.8e-63, Sum P(3) = 6.8e-63
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 581 VHPSSGLAQ----VPKRWVIYHEL 600
+ PS+G A +P W+IY E+
Sbjct: 928 IPPSNGQAAAVQALPTDWLIYDEM 951
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 371 (135.7 bits), Expect = 7.5e-63, Sum P(2) = 7.5e-63
Identities = 113/377 (29%), Positives = 173/377 (45%)
Query: 196 PESNYIDAAIVTTL--EIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIV 253
PE +D +++ L +I G ILVFL G + + I+
Sbjct: 530 PEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD-II 586
Query: 254 CPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKT 313
C +++ +P Q K+F P G RK+VLATNIAE+++TID + YV+DSG K K Y+P
Sbjct: 587 C-LHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYN 645
Query: 314 GMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVI 373
+ +L +SKA+A QR GR+GR PG C+ LY+ M D VPEI+R + +
Sbjct: 646 NVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYS-RLRAASMPDFKVPEIKRMPVEELC 704
Query: 374 LILK----NLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPL 429
L +K N +D L LD P GAL ELT++G + P+
Sbjct: 705 LQVKILDPNCKTNDFLQ-KLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPV 763
Query: 430 DPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP----KNKKFLADNARMNFYQGDA 485
P++SKM+ + C + +T+A F P + +K A + G
Sbjct: 764 HPLISKMLFFAVLVNCLDPALTLACAADY-KEPFTMPMSPVERQKAAAAKLELASLCGGD 822
Query: 486 GDHIALLNVYNSWKE---NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS- 541
DH+A++ + WK S ++C F+ +MK +R QL ++R GI
Sbjct: 823 SDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDI 882
Query: 542 SLCNLEAMKKAIISGFL 558
S C+ + I+ L
Sbjct: 883 SSCSQNSRDPGILRAVL 899
Score = 353 (129.3 bits), Expect = 7.5e-63, Sum P(2) = 7.5e-63
Identities = 74/197 (37%), Positives = 112/197 (56%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVG 58
+ K R LPI +++ + AV+ NQV++I GETG GKTTQ+PQYL + ++ K+
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQP E G +G +GY +R + + + + T+G++LR ++
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG 299
Query: 119 KLESYSVL---MVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
+ S S + +VDE HER +D +L I +DL+ L+L++ SATLDAE+FS YF
Sbjct: 300 SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGG 359
Query: 176 APILRVPGRRYPVEIHY 192
P++RVPG YPV Y
Sbjct: 360 CPVVRVPGFTYPVRTLY 376
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 375 (137.1 bits), Expect = 8.0e-63, Sum P(2) = 8.0e-63
Identities = 100/318 (31%), Positives = 162/318 (50%)
Query: 220 ILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKV 279
IL+FL G ++ V +++N+ T Q K+ P G RK+
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 280 VLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTG 339
+L+TNIAETS+T++ + +V+DSG K K ++ + L + ISKASA+QR GR+GR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCR 744
Query: 340 PGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQ 395
PG CFRL++ +Q +E T PE+ R L + L K L + DFL + PP
Sbjct: 745 PGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPA 803
Query: 396 XXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAAL 455
A++ +LT++G +A+ P++P L KM++ + KC + I+TIA
Sbjct: 804 LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACT 863
Query: 456 LSVGNSVFYRPK--NKKFLADNARMNFYQGDAGDHIALLNVYNSWKE---NDYSKQWCYD 510
L+ + F P ++K A R F G DH+ALL + +W++ + + + +C
Sbjct: 864 LAYRDP-FVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEK 922
Query: 511 NFIQFRSMKHARDIRDQL 528
NF+ +M+ +R QL
Sbjct: 923 NFLSQATMEIIIGMRTQL 940
Score = 349 (127.9 bits), Expect = 8.0e-63, Sum P(2) = 8.0e-63
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG---KVGCTQP 62
R++LP++ +E++++ ++EN+VV+IVGETGSGKTTQIPQ+L + + K+G ++ CTQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 63 XXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDC-TSEKTVLKYMTDGMVLREMLS-DPKL 120
E ++G +GY IR E S KT+L + T+G++LR +++ D L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTL 307
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
+ + ++VDE HER +D LL +DL++ LKL++SSA LD F YF P++
Sbjct: 308 STVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIY 367
Query: 181 VPGRRYPVE 189
+ GR + V+
Sbjct: 368 IQGRPFEVK 376
Score = 40 (19.1 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 343 CFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNF 387
C+ + ++ D D+ + + NLA LK +D+ LNF
Sbjct: 1022 CYEMVKVDGIPNDSSDSEMEDRTTANLA----ALK---LDEWLNF 1059
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 370 (135.3 bits), Expect = 8.0e-63, Sum P(2) = 8.0e-63
Identities = 132/464 (28%), Positives = 215/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 654 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 713
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+TI+
Sbjct: 714 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITIN 769
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 770 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 828
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 829 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 887
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 888 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 945
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + + W+E D S + Y +N + S++
Sbjct: 946 RAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1005
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 1006 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1063
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1064 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1102
Score = 353 (129.3 bits), Expect = 8.0e-63, Sum P(2) = 8.0e-63
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 516
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 517 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 576
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 577 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 636
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 637 IKVPGFMYPVKEHY 650
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 371 (135.7 bits), Expect = 1.0e-62, Sum P(2) = 1.0e-62
Identities = 132/464 (28%), Positives = 215/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 652 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 711
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+TI+
Sbjct: 712 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITIN 767
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 768 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 826
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 827 EKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 885
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 886 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 943
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + + W+E D S + Y +N + S++
Sbjct: 944 RAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1003
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 1004 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1061
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1062 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1100
Score = 351 (128.6 bits), Expect = 1.0e-62, Sum P(2) = 1.0e-62
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 514
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 515 TQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 574
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 575 SLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 634
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 635 IKVPGFMYPVKEHY 648
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 366 (133.9 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 131/464 (28%), Positives = 214/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 626 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 685
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+T++
Sbjct: 686 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVN 741
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 742 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 800
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 801 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 859
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 860 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 917
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D S + Y +N + S++
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 977
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1035
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1036 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1074
Score = 352 (129.0 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 79/195 (40%), Positives = 114/195 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGC--- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E Y G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 487
Query: 60 -TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSD 117
TQP E+G L VG+ +R E + L + T G++LR++ S+
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P
Sbjct: 548 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 607
Query: 178 ILRVPGRRYPVEIHY 192
+++VPG YPV+ HY
Sbjct: 608 VIKVPGFMYPVKEHY 622
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 151/456 (33%), Positives = 245/456 (53%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPXXXXXX 68
LP+ +L A+++ V+ G+GKTT++P L +A + ++ +P
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 69 XXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLMV 128
+G + G VGY+IRF+ S +T ++ +T+G++ R + SDP LE ++
Sbjct: 64 NAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIF 123
Query: 129 DEAHERTLSTDILLGIFKDL-VRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYP 187
DE HER++ +D+ L + +D+ LR DL++++ SAT+ A +A AP++ GR YP
Sbjct: 124 DEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYP 183
Query: 188 VEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTK 247
V + + + + +A+ + I + GDIL FL G IR+ G
Sbjct: 184 VALRHIPPNDRENLPSAVARAVRIAVRECEGDILAFLPG-----------VGEIRRCGQL 232
Query: 248 IGE---L---IVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ + L +V P+Y +LP Q + +P P G RKVVLAT IAETSLTI+G++ VVD
Sbjct: 233 LADDPPLHAPLVVPLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVDG 291
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G ++ Y+P +G+ L+ +S ASA QRAGR+GR GPG C+RL+ + Q + +
Sbjct: 292 GQTRRLRYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLAADP- 350
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVG 421
PEI +LA + L L + G+ D + +LD PP+ AL+ G +T+ G
Sbjct: 351 PEILIADLAPLALDLAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMITETG 410
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLS 457
R+MAE PL P L+ M++ + + + +AALL+
Sbjct: 411 RRMAELPLHPRLAHMLLRATERGPAPLACDVAALLT 446
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 366 (133.9 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 131/464 (28%), Positives = 214/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 654 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 713
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+T++
Sbjct: 714 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVN 769
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 770 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 828
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 829 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 887
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 888 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 945
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D S + Y +N + S++
Sbjct: 946 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 1005
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 1006 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1063
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1064 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1102
Score = 352 (129.0 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 79/195 (40%), Positives = 114/195 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGC--- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E Y G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 60 -TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSD 117
TQP E+G L VG+ +R E + L + T G++LR++ S+
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 178 ILRVPGRRYPVEIHY 192
+++VPG YPV+ HY
Sbjct: 636 VIKVPGFMYPVKEHY 650
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 362 (132.5 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 133/467 (28%), Positives = 214/467 (45%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESN---YIDAAIVTTLEIH--ATQASGDILVFLTGQXXXX 231
IL G+ +YP + + P S +D +VT L +H A G IL FL G
Sbjct: 654 ILAKLGKHQYPHRHRHHEWPRSEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIK 713
Query: 232 XXXXXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+
Sbjct: 714 GVQQ----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSI 769
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
T++ I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+
Sbjct: 770 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-R 828
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXX 406
S E M VPEI RT L N++L K + + + +FL DSP
Sbjct: 829 SRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQ 887
Query: 407 XXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP 466
G L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 888 EIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSS 945
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKH 520
+ D + DH+A + W+E D S + Y +N + S++
Sbjct: 946 LQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRF 1005
Query: 521 ARDIRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWT 572
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N
Sbjct: 1006 IHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQ 1063
Query: 573 VKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
K ++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1064 GKVTRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1105
Score = 352 (129.0 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 79/195 (40%), Positives = 114/195 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGC--- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E Y G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 60 -TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSD 117
TQP E+G L VG+ +R E + L + T G++LR++ S+
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P
Sbjct: 576 PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCP 635
Query: 178 ILRVPGRRYPVEIHY 192
+++VPG YPV+ HY
Sbjct: 636 VIKVPGFMYPVKEHY 650
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 360 (131.8 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 131/464 (28%), Positives = 213/464 (45%)
Query: 178 ILRVPGRRYPVEIH-YTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ + H + ++ + +D +VT L +H A G IL FL G
Sbjct: 598 ILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 657
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+TI+
Sbjct: 658 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITIN 713
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 714 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 772
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 773 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 831
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 832 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 889
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D S + Y +N + S++
Sbjct: 890 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 949
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 950 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1007
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1008 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1046
Score = 353 (129.3 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 79/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 401 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 460
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCT-SEKTVLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E S L + T G++LR++ S+P
Sbjct: 461 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNP 520
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 521 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 580
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 581 IKVPGFMYPVKEHY 594
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 360 (131.8 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 131/464 (28%), Positives = 213/464 (45%)
Query: 178 ILRVPGRRYPVEIH-YTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ + H + ++ + +D +VT L +H A G IL FL G
Sbjct: 626 ILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 685
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+TI+
Sbjct: 686 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITIN 741
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 742 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 800
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 801 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 859
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 860 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 917
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D S + Y +N + S++
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 977
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1035
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1036 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1074
Score = 353 (129.3 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 79/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 488
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCT-SEKTVLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E S L + T G++LR++ S+P
Sbjct: 489 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNP 548
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 549 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 608
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 609 IKVPGFMYPVKEHY 622
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 361 (132.1 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 130/464 (28%), Positives = 214/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 626 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 685
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+T++
Sbjct: 686 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVN 741
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 742 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 800
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 801 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 859
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 860 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 917
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D + + Y +N + S++
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 977
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1035
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1036 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1074
Score = 350 (128.3 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 488
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 489 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 548
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 549 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 608
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 609 IKVPGFMYPVKEHY 622
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 361 (132.1 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 130/464 (28%), Positives = 214/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 626 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 685
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+T++
Sbjct: 686 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVN 741
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 742 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 800
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 801 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 859
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 860 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 917
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D + + Y +N + S++
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 977
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1035
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1036 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1074
Score = 350 (128.3 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 488
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 489 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 548
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 549 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 608
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 609 IKVPGFMYPVKEHY 622
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 361 (132.1 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 130/464 (28%), Positives = 214/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 649 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 708
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+T++
Sbjct: 709 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVN 764
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 765 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 823
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 824 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 882
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 883 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 940
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D + + Y +N + S++
Sbjct: 941 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 1000
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 1001 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1058
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1059 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1097
Score = 350 (128.3 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 452 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 511
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 512 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 571
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 572 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 631
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 632 IKVPGFMYPVKEHY 645
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 361 (132.1 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 130/464 (28%), Positives = 214/464 (46%)
Query: 178 ILRVPGR-RYPVEIHYTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ +YP + ++ + +D +VT L +H A G IL FL G
Sbjct: 654 ILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 713
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS+T++
Sbjct: 714 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVN 769
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 770 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 828
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 829 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 887
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A DP L+K IV + F+C + ++ + + L+ F
Sbjct: 888 VLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 945
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D + + Y +N + S++
Sbjct: 946 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHG 1005
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 1006 LIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1063
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1064 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1102
Score = 350 (128.3 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 457 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 516
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 517 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 576
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 577 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 636
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 637 IKVPGFMYPVKEHY 650
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 353 (129.3 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 130/464 (28%), Positives = 212/464 (45%)
Query: 178 ILRVPGRRYPVEIH-YTKAPESNYIDAAIVTTLEIH--ATQASGDILVFLTGQXXXXXXX 234
IL G+ + H + ++ + +D +VT L +H A G IL FL G
Sbjct: 626 ILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQ 685
Query: 235 XXXXXRIRK-LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTID 293
R+++ LG + ++ PV++N+P Q IF P G RK+VLATNIAETS TI+
Sbjct: 686 Q----RLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTIN 741
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
I +VVDSG K + Y+ KT + L +S+A+ +QR GR+GR G + L+ S
Sbjct: 742 DIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFP-RSRL 800
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXG 409
E M VPEI RT L N++L K + + + +FL DSP G
Sbjct: 801 EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIG 859
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
L+Q LT +G+++A +P L+K IV + F+C + ++ + + L+ F
Sbjct: 860 VLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQN 917
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKE----NDYSKQWCY--DNFIQFRSMKHARD 523
+ D + DH+A + W+E D S + Y +N + S++
Sbjct: 918 RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHG 977
Query: 524 IRDQLT-CLVER--VG----IELTSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKH 575
+ Q + + E VG L S+ CN + ++ ++ G L+ A L N K
Sbjct: 978 LIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLM--AGLYPNLIQVRQGKV 1035
Query: 576 PQKVHVHPSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWL 619
++ P+S + ++ H+ + R+ T L+ WL
Sbjct: 1036 TRQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1074
Score = 351 (128.6 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGC---- 59
+E LP+ +R+ +L A++++ VVVI G+TG GKTT+IPQ L E T+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVII 488
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDP 118
TQP E+G L VG+ +R E + L + T G++LR++ S+P
Sbjct: 489 TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNP 548
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
LE S ++VDE HER ++TD LL + K L RL L+L++ SAT D E+FS YF P+
Sbjct: 549 SLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPV 608
Query: 179 LRVPGRRYPVEIHY 192
++VPG YPV+ HY
Sbjct: 609 IKVPGFMYPVKEHY 622
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 344 (126.2 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 73/197 (37%), Positives = 116/197 (58%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY--TKHGKVGC 59
LQK R +LP Y +QVL+++ VV+I G TG GKTTQ+PQ++ + + KH +V
Sbjct: 174 LQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVMV 233
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQP E G +G VGY +R + S+ TVL Y T G++LR + SDP
Sbjct: 234 TQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPV 293
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDA--EKFSAYF-NFA 176
+ +++DE HER ++TD LL ++ +++R DLK+++ SAT++ + FS YF N +
Sbjct: 294 ASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFENHS 353
Query: 177 -PILRVPGRRYPVEIHY 192
++R+ R + V++ Y
Sbjct: 354 MDVIRIESRAFDVKVFY 370
Score = 241 (89.9 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 60/178 (33%), Positives = 93/178 (52%)
Query: 218 GDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGAR 277
G ILVFL G L + +IV P+++ + + IF P R
Sbjct: 645 GTILVFLPGYEDIQQMLKAIDCWKNSL-KNMKNVIVLPLHSQMTSINHGDIFKSVPKDTR 703
Query: 278 KVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGR 337
K++LATNIAE S+TI+ + +VVD+G K K ++ + + +L V PI++++A QR+GR+GR
Sbjct: 704 KIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGR 763
Query: 338 TGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQ 395
G C RLYT Y M + + E++R + +V L K L +FL P+
Sbjct: 764 VANGYCIRLYTEQEYNS-MPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPE 820
Score = 167 (63.8 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 416 ELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADN 475
ELT +GR MA PLDP LS+M++ KC I+ + ALL+ + L
Sbjct: 872 ELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSK 931
Query: 476 ARMNFYQGDAGDHIALLNVYNSW--KENDYSKQWCYDNFIQFRSMKHARDIRDQL 528
+ Q D DH+ + + N + K N Q+C D+F+ F +M+ + R QL
Sbjct: 932 MKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQL 986
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 359 (131.4 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 100/318 (31%), Positives = 157/318 (49%)
Query: 191 HYT--KAPESNYIDAAIVT--TLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGT 246
HY ++ + +D ++T L+I A G IL FL G + LG+
Sbjct: 681 HYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRL---LEMLGS 737
Query: 247 KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKM 306
+ +V PV++N+P Q IF P G RK+VLATNIAETS+TI+ I +VVDSG K
Sbjct: 738 QNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKE 797
Query: 307 KWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQR 366
+ Y+ KT + L +SK++ +QR GR+GR G + L+ S + M VPEI R
Sbjct: 798 ERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFP-RSRLDKMPTYQVPEILR 856
Query: 367 TNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXGALNQVGELTKVGR 422
T L N+++ K + + + +FL DSP G L+Q LT +G+
Sbjct: 857 TPLENLVVQAK-IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGK 915
Query: 423 QMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQ 482
++A+ DP L+K IV + ++C + ++ I + L+ F + D A+ +
Sbjct: 916 RLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT--RDPFSSSLQNRAEVDKAKAVLSR 973
Query: 483 GDAGDHIALLNVYNSWKE 500
DH+A + W+E
Sbjct: 974 ESGSDHLAFVRAVAGWEE 991
Score = 340 (124.7 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 75/195 (38%), Positives = 114/195 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-----VG 58
+E LP+ +++ +L A+++N VVVI G+TG GKTT+IPQ L E Y G+ V
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSD 117
TQP E+G + VGY +R E + L + T G++LR++ +
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P LE S ++VDE HER ++TD LL + K + +L DL+L++ SAT D ++FS YF P
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCP 651
Query: 178 ILRVPGRRYPVEIHY 192
+++VPG YPV+ +Y
Sbjct: 652 VVKVPGFMYPVKEYY 666
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 359 (131.4 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 100/318 (31%), Positives = 157/318 (49%)
Query: 191 HYT--KAPESNYIDAAIVT--TLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGT 246
HY ++ + +D ++T L+I A G IL FL G + LG+
Sbjct: 681 HYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRL---LEMLGS 737
Query: 247 KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKM 306
+ +V PV++N+P Q IF P G RK+VLATNIAETS+TI+ I +VVDSG K
Sbjct: 738 QNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKE 797
Query: 307 KWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQR 366
+ Y+ KT + L +SK++ +QR GR+GR G + L+ S + M VPEI R
Sbjct: 798 ERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFP-RSRLDKMPTYQVPEILR 856
Query: 367 TNLANVILILKNLGIDDLLNFDFL----DSPPQXXXXXXXXXXXXXGALNQVGELTKVGR 422
T L N+++ K + + + +FL DSP G L+Q LT +G+
Sbjct: 857 TPLENLVVQAK-IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGK 915
Query: 423 QMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQ 482
++A+ DP L+K IV + ++C + ++ I + L+ F + D A+ +
Sbjct: 916 RLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT--RDPFSSSLQNRAEVDKAKAVLSR 973
Query: 483 GDAGDHIALLNVYNSWKE 500
DH+A + W+E
Sbjct: 974 ESGSDHLAFVRAVAGWEE 991
Score = 340 (124.7 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 75/195 (38%), Positives = 114/195 (58%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-----VG 58
+E LP+ +++ +L A+++N VVVI G+TG GKTT+IPQ L E Y G+ V
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 59 CTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSD 117
TQP E+G + VGY +R E + L + T G++LR++ +
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P LE S ++VDE HER ++TD LL + K + +L DL+L++ SAT D ++FS YF P
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCP 651
Query: 178 ILRVPGRRYPVEIHY 192
+++VPG YPV+ +Y
Sbjct: 652 VVKVPGFMYPVKEYY 666
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 382 (139.5 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 109/364 (29%), Positives = 182/364 (50%)
Query: 252 IVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNP 311
I+ +++++ ++ Q K FV PDG RK+V+ATNIAET +TI I V+D+G K ++
Sbjct: 950 IIHALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDE 1009
Query: 312 KTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLAN 371
+ + L+ IS+A+A QR GR+GR G CF ++T + + + + PE+ R +L +
Sbjct: 1010 RRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQD 1069
Query: 372 VILILK--NLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPL 429
++L +K LG + + LD P AL LT +G+Q+A+ PL
Sbjct: 1070 LVLRVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPL 1129
Query: 430 DPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHI 489
D L K+I+ FKC + I+IAA+LS S F + R+ F +GD+ D +
Sbjct: 1130 DVFLGKLIIHGAFFKCLDAAISIAAILSC-KSPFVNTMGSNAQKEAVRLGFRRGDS-DLL 1187
Query: 490 ALLNVYNSWKE-------NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS 542
+ N Y +WK N+Y+ +C NF+ +++ + D++ QL + G
Sbjct: 1188 TVYNAYCAWKRTRSTPGANEYA--FCRKNFLSPQTLLNIEDVKLQLMVSIADAG------ 1239
Query: 543 LCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVL 602
L L+ +KA L+ AR + ++T P + + L Q W Y +L+
Sbjct: 1240 LVTLDTNQKAS-----LNRARSTRQRHFFTTP-PSHDTNNANDTLIQSVIAWSFYPKLL- 1292
Query: 603 TTKE 606
T+E
Sbjct: 1293 -TRE 1295
Score = 311 (114.5 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 69/201 (34%), Positives = 115/201 (57%)
Query: 1 MLQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVG 58
M+Q R LPI+ ++ ++L + ++ ++I ETGSGK+TQIP ++ HE + K+
Sbjct: 638 MVQS-RMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIY 696
Query: 59 CTQPXXXXXXXXXXXXXXEMGVK---LGHE---VGYSIRFEDCTSEKTVLKYMTDGMVLR 112
T+P E+G +G +G+++R E S T L + T G+V+R
Sbjct: 697 VTEPRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVR 756
Query: 113 EMLSDPK-LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSA 171
ML P + + +++DE HER++ +D LL + + L++ R DLKL++ SAT+DA +FS
Sbjct: 757 -MLERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFST 815
Query: 172 YFNFAPILRVPGRRYPVEIHY 192
Y P+L +PGR +PVE +
Sbjct: 816 YLGGVPVLNIPGRTFPVETKF 836
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 161/465 (34%), Positives = 246/465 (52%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIP-QYLHEAGYTKHGKVGCTQPXXXX 66
+LP+ ++L A+ V++ TG+GK+T +P Q L G +GK+ +P
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGI--NGKIILLEPRRLA 60
Query: 67 XXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVL 126
+ K G VGY +R ++C T L+ +T+G++ R + DP+L ++
Sbjct: 61 ARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLV 120
Query: 127 MVDEAHERTLSTDILLGIFKDLVR-LRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRR 185
++DE HER+L D+ L + D+ + LR DLKLLI SATLD ++ AP++ GR
Sbjct: 121 ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRS 180
Query: 186 YPVEIHYTKAP-ESNYIDAAIVTTLEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRK- 243
+PVE Y P + DA V T E+ Q SG +L+FL G R+++
Sbjct: 181 FPVERRYLPLPAHQRFDDAVAVATAEM-LRQESGSLLLFLPG--------VGEIQRVQEQ 231
Query: 244 LGTKIG-ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
L ++IG ++++CP+Y L Q K +P P G RKVVLATNIAETSLTI+GI+ VVD
Sbjct: 232 LASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCA 291
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ-EDMEDNTV 361
++ ++P+TG+ L+ +S+AS QRAGR+GR PG L+ I Q E +
Sbjct: 292 QERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPG--ISLHLIAKEQAERAAAQSE 349
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE-LTKV 420
PEI +++L+ +++ L G D +LD PP GAL GE L+
Sbjct: 350 PEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALE--GERLSAQ 407
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLS----VGNS 461
G++MA DP L+ M+V++ + IAA+L +GNS
Sbjct: 408 GQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNS 452
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 563 (203.2 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 122/325 (37%), Positives = 184/325 (56%)
Query: 310 NPK-TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTN 368
+PK +G+E L V +SK A QR GR+GR G C+RLYT + + + E PEIQR N
Sbjct: 148 SPKDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFDK-FEKMAAPEIQRCN 206
Query: 369 LANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE---LTKVGRQMA 425
LA+V+L L + + ++L FDF+ P GAL + LT +GR+MA
Sbjct: 207 LASVMLQLLAMKVPNVLTFDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPIGRKMA 266
Query: 426 EFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDA 485
FPL+P +K I+ S KF C+ EI+TI +LLSV +SV Y P ++ + R F +
Sbjct: 267 AFPLEPKFAKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRDEVQSVRKKFISSE- 324
Query: 486 GDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCN 545
GDHI LLN+Y ++K +K WC +NF+ ++M ++R QL + ++ + + SS +
Sbjct: 325 GDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGD 384
Query: 546 LEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTK 605
+E++++ + + TA LQ +G+Y T Q V +HPSS L V+Y L+ T K
Sbjct: 385 MESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNK 444
Query: 606 EYMRQVTELKPEWLFEIAPHYYMLK 630
YMR + + EWL+E AP Y+ K
Sbjct: 445 CYMRDLCVVDAEWLYEAAPDYFRRK 469
Score = 57 (25.1 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGE 33
L+ +R++LPI+ R Q+L ++ V++GE
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGE 89
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 358 (131.1 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 97/336 (28%), Positives = 159/336 (47%)
Query: 209 LEIHATQASGDILVFLTGQXXXXXXXXXXXXRIRKLGTKIGELIVCPVYANLPTELQAKI 268
+ I + G ILVFL G + + + P ++ +P + Q K+
Sbjct: 645 MHIKSKNIPGAILVFLPGWNLIFALMKFLQNT--NIFGDTSQYQILPCHSQIPRDEQRKV 702
Query: 269 FVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASA 328
F P P+G K++L+TNIAETS+TID I +V+D ++MK + + S SK +
Sbjct: 703 FEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNL 762
Query: 329 MQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNF- 387
QR GR+GR PG CF L + +Q +EDN PE+ RT L + L +K L + + +F
Sbjct: 763 EQRKGRAGRVRPGFCFTLCSRARFQA-LEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFL 821
Query: 388 -DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCS 446
L+ PP L+ ELT +GR +A P++P L KM+V F C+
Sbjct: 822 SKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCA 881
Query: 447 NEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGD-AGDHIALLNVYNSWKENDY-- 503
+ + +A+ S + VF ++ LA++ + G DH+A++ W+
Sbjct: 882 DLMAIMASYSSTFSEVFSLDIGQRRLANHQKA--LSGTKCSDHVAMIVASQMWRREKQRG 939
Query: 504 ---SKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
++C +Q +M D + QL L+++ G
Sbjct: 940 EHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAG 975
Score = 327 (120.2 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 73/189 (38%), Positives = 107/189 (56%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE----AGYTKHGKVGCTQ 61
R+ LPI R ++L A+ +N VV+I G TG GKTTQI QY+ + +G + + TQ
Sbjct: 381 REKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQ 440
Query: 62 PXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKT-VLKYMTDGMVLREMLSDPKL 120
P E +LG VGYS+RFE + + T G++LR++ + L
Sbjct: 441 PRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--EAGL 498
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
S ++VDE HER +++D LL I +D+V DL +++ SAT+D KFS YF P+L
Sbjct: 499 RGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLE 558
Query: 181 VPGRRYPVE 189
VPGR +PV+
Sbjct: 559 VPGRAFPVQ 567
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 568 (205.0 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 122/324 (37%), Positives = 186/324 (57%)
Query: 311 PK-TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNL 369
PK +G+E L V +SK A QR GR+GR G C+RLYT + + E + TVPEIQR NL
Sbjct: 157 PKDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMTVPEIQRCNL 215
Query: 370 ANVILILKNLGIDDLLNFDFLDSPPQXXXXXXXXXXXXXGALNQVGE---LTKVGRQMAE 426
A+V+L L + + ++L FDF+ P GAL + LT +GR+MA
Sbjct: 216 ASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAA 275
Query: 427 FPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAG 486
FPL+P +K I+ S KF C+ EI+TI +LLSV +SV + P +++ R F + G
Sbjct: 276 FPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKFISSE-G 333
Query: 487 DHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNL 546
DH+ LLN+Y ++K +K WC +NF+ ++M ++R QL + ++ + + SS ++
Sbjct: 334 DHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDV 393
Query: 547 EAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLTTKE 606
E++++ + + TA LQ +G+Y T Q V +HPSS L V+Y EL+ T K
Sbjct: 394 ESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKC 453
Query: 607 YMRQVTELKPEWLFEIAPHYYMLK 630
YMR + + +WL+E AP Y+ K
Sbjct: 454 YMRDLCVIDAQWLYEAAPEYFRRK 477
Score = 49 (22.3 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVG 32
++ +R++LPI+ R Q+L ++ V++G
Sbjct: 67 VELQRRSLPIFQARGQLLAQLRNLDNAVLIG 97
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 325 (119.5 bits), Expect = 2.4e-58, Sum P(3) = 2.4e-58
Identities = 83/274 (30%), Positives = 142/274 (51%)
Query: 197 ESNYIDAAIVTTLEIH-ATQASG----DILVFLTGQXXXXXXXXXXXXRIRKLGTKIGEL 251
+S+ +D ++ L +H T+ S IL+FL G R + E
Sbjct: 924 QSDDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELM--RRHPMLRNENEF 981
Query: 252 IVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNP 311
++ P+++++ +LQAK+F P RK+VL+TNIAETS+TI+ + YV+DS K+K++
Sbjct: 982 LILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHET 1041
Query: 312 KTGMESLLVYPISKASAMQRAGRSGRTGP-GKCFRLYTINSYQEDMEDNTVPEIQRTNLA 370
+ + K+S QR GR+GR G C+ + + + Y +E+ + E++R L
Sbjct: 1042 QRDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNT-LEEFQLSEMRRMPLH 1100
Query: 371 NVILILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFP 428
+ L +K L + D++ F + L+ P GALN ELT +G Q++ P
Sbjct: 1101 ELCLQVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIP 1160
Query: 429 LDPMLSKMIVASDKFKCSNEIITIAALLSVGNSV 462
+DP + KMI+ F+C + I+TIA+ + N +
Sbjct: 1161 VDPRIGKMIILGSYFRCLDPILTIASFSNQKNPI 1194
Score = 314 (115.6 bits), Expect = 2.4e-58, Sum P(3) = 2.4e-58
Identities = 67/185 (36%), Positives = 108/185 (58%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE----AGYTKHGKV 57
+ ++R LPI+ R ++ +++ NQ+++I+G+TG GKTTQIPQ++ E +G+ + +
Sbjct: 710 IYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNI 769
Query: 58 GCTQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTV-LKYMTDGMVLREMLS 116
TQP E K+G VGY IRF++ T L T G++L+ M S
Sbjct: 770 VMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYS 829
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFA 176
D KL + S L +DE HER + TD LL I K L+ ++L++++ SAT+D SAYF
Sbjct: 830 DMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTC 889
Query: 177 PILRV 181
P++++
Sbjct: 890 PVIKL 894
Score = 95 (38.5 bits), Expect = 2.4e-58, Sum P(3) = 2.4e-58
Identities = 31/123 (25%), Positives = 57/123 (46%)
Query: 479 NFYQGDAGDHIALLNVYNSWKEN--DYSK-QWCYDNFIQFRSMKHARDIRDQLTCLVERV 535
N Y DH++ LN++N W ++ D ++ Q+C D F+ ++ ++ QL + +
Sbjct: 1230 NLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYCQD-FLSIPLLQQILKVKKQLLSTINDL 1288
Query: 536 GI---ELTSSLCN----------LEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVH 582
GI +L N L+ ++ I SG + AR +K + T+ + +H
Sbjct: 1289 GIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIARQRKKREFKTLS--ENTFLH 1346
Query: 583 PSS 585
PSS
Sbjct: 1347 PSS 1349
Score = 78 (32.5 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 545 NLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQV--PKR-WVIYH 598
NL+ ++ I SG + AR +K + T+ + +HPSS L Q PK WVI+
Sbjct: 1311 NLDIIRAIICSGLFPNIARQRKKREFKTLS--ENTFLHPSSIVYNLFQELNPKENWVIFE 1368
Query: 599 ELVLTTKEYMRQVTELKPE 617
E T +++ +T + PE
Sbjct: 1369 EKFKTKLTFIKTITRI-PE 1386
Score = 38 (18.4 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 431 PMLSKMIVASDKFKCSNEIITIAALLSV-GNSV-FYRPKNKKFLADNARMNFYQGDAGDH 488
P +S ++ S N+ T + +S+ G + FY P L + R + +
Sbjct: 1385 PEISLLLFGSTPI--FNQTSTENSTVSINGTQIKFYIPTLSCHLLLSIREQM-EKSLQKY 1441
Query: 489 IALLNVYNSWKENDYSKQWCYDNFIQFRSMK 519
I + NS+ + DY Q C + F K
Sbjct: 1442 IEQSDYSNSFSKTDYEFQKCLMALLSFNFNK 1472
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 364 (133.2 bits), Expect = 3.6e-58, Sum P(2) = 3.6e-58
Identities = 91/291 (31%), Positives = 145/291 (49%)
Query: 253 VCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPK 312
+ P+++ +P E Q ++F P PDG KV+L+TNIAETS+TI+ + +V+DS K+K +
Sbjct: 689 ILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSH 748
Query: 313 TGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANV 372
M + SK + QR GR+GR PG CF L + + E +E + PEI RT L V
Sbjct: 749 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-EKLETHMTPEIFRTPLHEV 807
Query: 373 ILILKNLGIDDLLNF--DFLDSPPQXXXXXXXXXXXXXGALNQVGELTKVGRQMAEFPLD 430
L +K L + + NF ++ PP AL+ ELT +GR +A+ P++
Sbjct: 808 ALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIE 867
Query: 431 PMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIA 490
P L KM++ F + + TI+A K F+ NF DH+A
Sbjct: 868 PRLGKMMIMGCIFNVGDAVCTISAATCFPEPFINEGKRLGFV----HRNFAGSRFSDHVA 923
Query: 491 LLNVYNSWKE-----NDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVG 536
LL+V+ +W E D ++C + +++ + + QL ++ VG
Sbjct: 924 LLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVG 974
Score = 316 (116.3 bits), Expect = 3.6e-58, Sum P(2) = 3.6e-58
Identities = 68/194 (35%), Positives = 110/194 (56%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVG-C---- 59
ER LP+ +++EQ++ + N VV+I G TG GKTTQ+PQY+ + + K G+ C
Sbjct: 391 ERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDE-FIKGGRASDCNIVV 449
Query: 60 TQPXXXXXXXXXXXXXXEMGVKLGHEVGYSIRFEDCTSEKTV-LKYMTDGMVLREMLSDP 118
TQP E G +G GYS+RFE + + T G++LR++ S
Sbjct: 450 TQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKLESG- 508
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
+ S ++VDE HER ++TD LL + +D+V+ D+++++ SAT+D F YF P+
Sbjct: 509 -IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPV 567
Query: 179 LRVPGRRYPVEIHY 192
+ V GR +PV+ ++
Sbjct: 568 IEVHGRAHPVQEYF 581
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 650 611 0.00087 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 624 (66 KB)
Total size of DFA: 338 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.20u 0.12s 45.32t Elapsed: 00:00:02
Total cpu time: 45.33u 0.12s 45.45t Elapsed: 00:00:02
Start: Sat May 11 10:14:37 2013 End: Sat May 11 10:14:39 2013
WARNINGS ISSUED: 2