BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041899
(650 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/644 (63%), Positives = 528/644 (81%), Gaps = 2/644 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+Q+ RK+LP+Y YREQ++ AV+E QV++IVGETGSGKTTQIPQYLHEAG++K GK+GCTQ
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQ 519
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAA+SVAARV+ E+G KLG+EVGYSIRFEDCTS+KTVL+YMTDGM++RE L+ P L
Sbjct: 520 PRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLA 579
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
SYSVL++DEAHERTL TDIL G+ KD+ R R DLKLLISSAT+DAE+FS YF+ AP +
Sbjct: 580 SYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNI 639
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERI 241
PGR+Y V HYT+APE++Y+DAA+VT L+IH T+ GDILVFLTGQEE++ E+L+ R
Sbjct: 640 PGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRT 699
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
R LGTKI ELI+ +Y+ LPT+LQAKIF PTP ARKVVLATNIAETSLTIDGI YV+D
Sbjct: 700 RGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDP 759
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+ K K +NP+TGMESL++ P+S+ASA QR GR+GR PGKCFRL+T ++ ++E+NT+
Sbjct: 760 GFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTI 819
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVG 421
PEIQRTNL NV+L+LK++GI+DL+NFDF+D PP + L ALE LYALGALN G+LTK+G
Sbjct: 820 PEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLG 879
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFP+DP LSKMI+AS+K+KCS EI+TI A+LSVGN++FYRPK+K F AD AR F+
Sbjct: 880 RKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFF 939
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
GDH+ L+NV+N W+E+ Y+ QWC++NFIQ RSMK A+D+RDQL L+ERV I L S
Sbjct: 940 HP-QGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVS 998
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
++ + ++++K I SGF ++A+L+K+G + T KH Q V +HPSS L Q P +WV+YHELV
Sbjct: 999 NVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELV 1058
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRVAGR 645
LTTKE+MRQ+ E++ WL EIAPH Y KDV D +K+P+ G+
Sbjct: 1059 LTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND-NQKLPKNIGK 1101
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/646 (63%), Positives = 525/646 (81%), Gaps = 4/646 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L AV +Q+++I GETGSGKTTQIPQYL E GYT+ G K+ CT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVAARV+REMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 515
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SATLD +FS +F+ AP+ R
Sbjct: 516 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFR 575
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQEEIE E+L++R
Sbjct: 576 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 755
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP E L ALE LYALGALN +GELT
Sbjct: 756 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 815
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 816 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 875
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 876 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 935 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHEL 993
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 994 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGK 1039
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/646 (63%), Positives = 524/646 (81%), Gaps = 4/646 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ +QV++I GETGSGKTTQIPQYL E GYT G K+ CT
Sbjct: 395 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 454
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVAARV+REMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 455 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 514
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SAT+D +FS +F+ AP+ R
Sbjct: 515 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 574
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQEEIE E+L++R
Sbjct: 575 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 634
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 635 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 694
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 695 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 754
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP E L ALE LYALGALN +GELT
Sbjct: 755 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 814
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 815 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 874
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 875 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 933
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 934 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHEL 992
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 993 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGK 1038
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/646 (63%), Positives = 524/646 (81%), Gaps = 4/646 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHG-KVGCT 60
+Q R++LP++ +RE++L A+ +QV++I GETGSGKTTQIPQYL E GYT G K+ CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVAARV+REMGVKLG+EVGYSIRFEDCTSE+TVL+YMTDGM+LRE LS+P L
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 511
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+MVDEAHERTL TDIL G+ KD+ R R +LK+L++SAT+D +FS +F+ AP+ R
Sbjct: 512 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 571
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER 240
+PGRR+PV+I YTKAPE++Y++A +V+ L+IH TQ GDILVFLTGQEEIE E+L++R
Sbjct: 572 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R+LG+KI EL+V P+YANLP+++QA+IF PTP GARKVV+ATNIAETSLTI+GI YV+D
Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 691
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K K YNP+TGMESL V P SKASA QRAGR+GR GKCFRLYT +YQ ++E+ T
Sbjct: 692 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 751
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV 420
VPEIQRT+L NV+L+LK+LGI DL++FDFLD PP E L ALE LYALGALN +GELT
Sbjct: 752 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 811
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MAE P+DPMLSKMI+AS+K+ CS EI+T+AA+LSV NS+FYRPK+K ADNAR+NF
Sbjct: 812 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 871
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+ GDH+ LLNVY W E+ YS QWCY+NF+QFRSM+ ARD+R+QL L+ERV + L+
Sbjct: 872 FL-PGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 930
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S + ++KAI +G+ HTARL ++G Y TVK Q V +HP+S L + RW++YHEL
Sbjct: 931 SCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHEL 989
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLR-KKMPRVAGR 645
VLTTKE+MRQV E++ WL E+APHYY K++ED KKMP+ G+
Sbjct: 990 VLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGK 1035
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/647 (62%), Positives = 523/647 (80%), Gaps = 5/647 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+++ RK+LP+Y +R+ + AV+E+QV++I GETGSGKTTQ+PQYL+EAG+ + GK +GCT
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCT 416
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVAARV+ E+G KLG +VGYSIRFEDCTSEKTVLKYMTDGM+LRE L++P L
Sbjct: 417 QPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDL 476
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+M+DEAHERTL TDIL G+ KD+ R R DLKLLISSATLDAEKFS++F+ API R
Sbjct: 477 ASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFR 536
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQEEIETVEEILKE 239
+PGRR+PV+I+YT+APE++Y+DAAIVT ++IH TQ GDILVFLTGQEEIETV+E L E
Sbjct: 537 IPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALME 596
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVV 299
R + LG+KI ELI PVYANLP++LQAKIF PTP ARKVVLATNIAETS+TIDGI YV+
Sbjct: 597 RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVI 656
Query: 300 DSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDN 359
D G+SK ++ ++G+E L V ISKA+A QRAGR+GRTGPGKCFRLYT +Y+ ++E+
Sbjct: 657 DPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQ 716
Query: 360 TVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTK 419
+PEIQRTNL NV+L+LK+LGI DL++FDFLD PPQE L ALE LYALGALN GELTK
Sbjct: 717 PIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTK 776
Query: 420 VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMN 479
+GR+MAEFP DP +SKMI+AS+K++CS EI+TIAA+LS +VFYRPK + AD+AR
Sbjct: 777 LGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKG 836
Query: 480 FYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL 539
F+ AGDHI L+NVYN W+E+ +S++WC +N++Q R+MK ARD+RDQL L+ERV IE
Sbjct: 837 FW-SPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIET 895
Query: 540 TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHE 599
SS ++ ++KAI +G+ + ++L G Y TVKH H HP+S L + RWV+Y E
Sbjct: 896 KSSTDTIK-IRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFE 954
Query: 600 LVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED-LRKKMPRVAGR 645
LV T+KE+MR+++E++ WL E+APHYY +++ED KKMP+ G+
Sbjct: 955 LVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGK 1001
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/643 (61%), Positives = 518/643 (80%), Gaps = 4/643 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-HGKVGCT 60
L+ RK+LP+Y Y++ +L+A+ E QV++IV ETGSGKTTQ+PQ+LHEAGYTK + K+ CT
Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCT 470
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVAARV++EM V+LG EVGYSIRFE+ TSEKTV+KY+TDGM+LRE L++P L
Sbjct: 471 QPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDL 530
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
SYSV+++DEAHERTL TDIL G+ KD+ R R DLK+LISSAT+DAEKFSAYF+ AP+
Sbjct: 531 ASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFY 590
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER 240
VPGRRYPV+I+YT PE+NYI AAI T L+IH TQ +GDILVFLTGQ+EIE + E ++E
Sbjct: 591 VPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQEL 650
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
R LG +I E+I+CP+YANLP+ELQAKIF PTP GARKVVLATNIAETS+TIDG+ +V+D
Sbjct: 651 CRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVID 710
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
SG+ K YNP+TGMESL+ P S+ASA QRAGR+GR GPGKCFRLYT +Y +++ T
Sbjct: 711 SGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVT 770
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV 420
PEIQRTNL N++L+LK+LGI++LL+FDF+D+PP E L ++LELLYALGALN GELTK+
Sbjct: 771 SPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKL 830
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GRQMAEFP DPMLSK ++AS K+ C E+++I ++L +S+FYRPK+K AD AR NF
Sbjct: 831 GRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANF 890
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIEL- 539
Q GDH+ LL+++N W + D+S W +NF+Q++S+ ARD+RDQL L ERV IEL
Sbjct: 891 TQP-GGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELV 949
Query: 540 TSSLCNLEAMKKAIISGFLLHTARLQKNG-SYWTVKHPQKVHVHPSSGLAQVPKRWVIYH 598
T+S +L+ +KKAI +G+ + ARL ++G SY TVK Q V++HPSS +A+ + +IY
Sbjct: 950 TNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYF 1009
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPR 641
ELVLTTKEY RQ+TE++PEWL EI+PHY+ +++E+L+K R
Sbjct: 1010 ELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKR 1052
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/635 (57%), Positives = 484/635 (76%), Gaps = 2/635 (0%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPR 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQPR
Sbjct: 560 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 619
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+SVA RVS E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 620 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 679
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 680 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 739
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQEEI+T EIL ER++
Sbjct: 740 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 799
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 800 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 859
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 860 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 919
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP E L A+E LY LGAL+ G LT++GR+
Sbjct: 920 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1038
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1039 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1097
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1098 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1157
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1158 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1192
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/635 (57%), Positives = 484/635 (76%), Gaps = 2/635 (0%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPR 63
++R++LPIY +EQ+++AV +NQ+++++GETGSGKTTQI QYL EAGYT GK+GCTQPR
Sbjct: 584 EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPR 643
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+SVA RVS E G LG EVGY+IRFEDCTS +TV+KYMTDGM+LRE L DP L Y
Sbjct: 644 RVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQY 703
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
+++M+DEAHERT+ TD+L G+ K V+ R D+KL+++SATLDA KFS YF API +PG
Sbjct: 704 AIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPG 763
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
R YPVEI YTK PE++Y+DA+++T ++IH T+ GDILVFLTGQEEI+T EIL ER++
Sbjct: 764 RTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKS 823
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
LG + ELI+ PVY+ LP+E+Q +IF P P G+RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 824 LGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGF 883
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YN KTG++ L+V PIS+A A QRAGR+GRTGPGKC+RLYT +Y+++M VPE
Sbjct: 884 VKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPE 943
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI+DLL+FDF+D+PP E L A+E LY LGAL+ G LT++GR+
Sbjct: 944 IQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+PML KM++ S CS E++TI ++LSV N VFYRPK+K+ LAD + F+Q
Sbjct: 1004 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQT 1062
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK N +S WCY+NFIQ RS++ A+DIR Q+ +++R +++ S
Sbjct: 1063 E-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCG 1121
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
+ ++KAI SGF + A+ Y T+ Q V++HPSS L WV+YHELVLT
Sbjct: 1122 KSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT 1181
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
TKEYMR+VT + P WL E AP ++ + D L K+
Sbjct: 1182 TKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQ 1216
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/637 (55%), Positives = 494/637 (77%), Gaps = 2/637 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R++LPI+ RE L+AV E+Q++V++GETGSGKTTQ+ QYL EAGY GK+GCTQ
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQ 560
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAA+SV+ RV+ E G +LG EVGY+IRFEDCTS +T++K+MTDG++LRE L DP L
Sbjct: 561 PRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLS 620
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
+YSV+++DEAHERT+STD+L G+ K ++ R +LK+LI+SATL+AEKFS YF A + +
Sbjct: 621 AYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFII 680
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERI 241
PGR +PV+I YTK PE++Y+DA+++T ++IH ++ GDIL+FLTGQEEI+ +IL ER+
Sbjct: 681 PGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERM 740
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG+ + +LI+ PVY+ LP+E+Q KIF P P G+RKVV+ATNIAETSLTIDGI YV+D
Sbjct: 741 KSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDP 800
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G+SK K +NPK GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT ++++ +M +++
Sbjct: 801 GFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSI 860
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVG 421
PEIQRTNL N +L +K +GI+DLLNFDF+D PP + L A+E LY+LGAL++ G LT++G
Sbjct: 861 PEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLG 920
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFPLDP LSKM++AS CS+EI+T+ A+LSV N VFYRPK K+ LAD + F+
Sbjct: 921 RKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQKKAKFF 979
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
Q + GDH+ LLNVY SWK + +S WC++NF+Q RS++ A+D+R QL +++R +++ S
Sbjct: 980 QPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIIS 1038
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ N ++KAI SGF + ++ N Y T+ Q V++HPSS L WVIYHELV
Sbjct: 1039 AGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELV 1098
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
+TTKEYMR+V + P+WL E+AP ++ D + K+
Sbjct: 1099 MTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKR 1135
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/637 (55%), Positives = 484/637 (75%), Gaps = 2/637 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+Q++R++LPIY ++++++AV +NQV+V++GETGSGKTTQ+ QYL EAGYT GK+GCTQ
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAA+SVA RV+ E G +LG EVGY+IRFEDCT TV+KYMTDGM+LRE+L D L
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+M+DEAHERT+ TD+L G+ K L++ R DL+L+++SATLDAEKFS YF I +
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERI 241
PGR +PVEI YTK PE++Y+DAA++T L+IH T+ GDILVFLTGQEEI++ + L ER+
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG + ELI+ PVY+ LP+E+Q++IF P P G RKVV+ATNIAE SLTIDGI YVVD
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G++K YNPK G+ESL++ PIS+ASA QRAGR+GRTGPGKC+RLYT ++Y+ +M ++
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVG 421
PEIQR NL L +K +GI+DLL+FDF+D P + L A+E LY+LGAL++ G LTK+G
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
R+MAEFPL+P LSKM++AS CS+EI+T+ A++ GN +FYRP+ K+ AD R F+
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 986
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
Q + GDH+ LL VY +WK ++S WC++NFIQ RS++ A+D+R QL ++++ +++ +
Sbjct: 987 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1045
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ N ++KAI +GF H AR Y T+ Q V++HPSS L Q WVIYH+LV
Sbjct: 1046 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1105
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
+TTKEYMR+VT + P+WL E+AP ++ + D + K+
Sbjct: 1106 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKR 1142
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/628 (55%), Positives = 475/628 (75%), Gaps = 2/628 (0%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPR 63
++R++LPI+ ++ ++ A+ +NQ++V+VGETGSGKTTQ+ QY EAG + GK+GCTQPR
Sbjct: 535 EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPR 594
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+SVA RV+ E G KLG +VGY+IRFEDCTS+ T++KYMTDGM+LRE L DP L Y
Sbjct: 595 RVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGY 654
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S++M+DEAHERT+ TD+L G+ K R R +LKL+I+SATLD+ KFS YF API +PG
Sbjct: 655 SLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPG 714
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
R +PVEI YT+ PES+Y++AA +T ++IH T+ GD+LVFLTGQEEI+T E+L ER++
Sbjct: 715 RTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKS 774
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
+G + ELI+ PVY LP+E+Q +IF P P G RKVV+ATNIAETSLTIDGI YVVD G+
Sbjct: 775 MGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGF 834
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K K YNPK+GM+SL+V PIS+A+A QR+GR+GRTGPGKC+RLYT +++++M VPE
Sbjct: 835 VKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPE 894
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGRQ 423
IQRTNLA+ +L LK +GI++L++FDF+D+PP + + AL L+ L AL+ G LTK+GR+
Sbjct: 895 IQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
MAEFPL+P LSK+++ S CS E++TI A+L+V N +FYRPK K+ AD + F+Q
Sbjct: 955 MAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQKKAKFHQP 1013
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
+ GDH+ LL VYNSWK + +S+ WC++NFIQ RSMK A+DIR QL +++R + + S
Sbjct: 1014 E-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCG 1072
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELVLT 603
++ ++KAI SGF + A+ Y T+ Q V++HPSS Q WV+YHELV+T
Sbjct: 1073 RDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMT 1132
Query: 604 TKEYMRQVTELKPEWLFEIAPHYYMLKD 631
TKEYMR+VT + P+WL E AP ++ + D
Sbjct: 1133 TKEYMREVTAIDPKWLVEFAPSFFKIGD 1160
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/641 (50%), Positives = 478/641 (74%), Gaps = 2/641 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
+ +R+TLP+Y R ++++AV++NQ +VIVGETGSGKTTQI QYL E G++ +G +GCTQ
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQ 535
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAA+SVA RV+ E+G K+GH+VGY+IRFED T T +KYMTDGM+ RE L DP++
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YSV+M+DEAHERT++TD+L + K R +LK++++SATL++ KFS YF PI+ +
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERI 241
PG+ +PVE+ Y++ P+ +YI+AA+ ++IH + GDILVFLTGQEEI++ EIL +R+
Sbjct: 656 PGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 242 RKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDS 301
+ LG IGEL++ PVY+ LP+E+Q+KIF PTP G+RKVV ATNIAETS+TIDGI YVVD
Sbjct: 716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDP 775
Query: 302 GYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTV 361
G++K+ YN + G+E L+V PIS+A A QR GR+GRTGPGKC+RLYT +++ +M +NTV
Sbjct: 776 GFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTV 835
Query: 362 PEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVG 421
PEIQR NL++ IL+LK +GI+DLL FDF+D PP+ L+ AL LY L +L+ G+LT +G
Sbjct: 836 PEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLG 895
Query: 422 RQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFY 481
++M+ FP+DP LS+ +++S +CS+EI+TI ++LSV N VFYRPK+++ AD+ + F+
Sbjct: 896 KEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSKKAKFH 954
Query: 482 QGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
GDH+ LLNVY W++ +YS+Q+C NF+ FR +K ARD++ Q++ + +++G++L S
Sbjct: 955 HP-YGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLIS 1013
Query: 542 SLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHELV 601
+ + ++K +SGF ++ A+ Y T+ +V +HPSS L +V+YH +V
Sbjct: 1014 CHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIV 1073
Query: 602 LTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
LT++EYM QVT ++P+WL E+APH+Y D E +K ++
Sbjct: 1074 LTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKKAKI 1114
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/638 (52%), Positives = 464/638 (72%), Gaps = 4/638 (0%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
++++R+ LP++ R+Q L AV +NQ++V++GETGSGKTTQI QYL E GYT K +GCT
Sbjct: 503 MKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCT 562
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVA RV+ E+G ++G EVGY+IRFED TS T +KYMTDGM+ RE L DP L
Sbjct: 563 QPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
YSV+++DEAHERT++TD+L G+ K V R DLKL+++SATLDAE+FS+YF PI
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFT 682
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER 240
+PGR YPVEI YTK PE++Y+DAA++T ++IH ++ GDILVFLTGQEEI+T EIL ER
Sbjct: 683 IPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYER 742
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+ LG I EL++ PVY+ LP+E+Q++IF P P G RKVV+ATNIAETSLTIDGI YVVD
Sbjct: 743 SKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ K ++PK GM+SL+V PIS+A A QR+GR+GRTGPGKC+RLYT ++Y+ +M +
Sbjct: 803 PGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSP 862
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV 420
+PEIQR NL++ IL+LK +GI+DLLNFDF+D PP + + AL+ LYAL AL+ G LT +
Sbjct: 863 IPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPL 922
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+MA+FP++P LSK+++ S + CS E+++I A+LSV N ++ RP+ K+ AD R F
Sbjct: 923 GRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEADRQRAQF 981
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
++ DH+ LLNVY +WK N S WCY+++IQ R M+ A D+R QL L++R +
Sbjct: 982 ANPES-DHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVV 1040
Query: 541 SSLCNLEAMKKAIISGFLLHTA-RLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHE 599
S E + +A+ SG+ + A R G Y T+ V++HPS L WVIYHE
Sbjct: 1041 SCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHE 1100
Query: 600 LVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRK 637
L+ T+KEYM V+ + P+WL E+AP ++ + + K
Sbjct: 1101 LIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSK 1138
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/652 (51%), Positives = 467/652 (71%), Gaps = 20/652 (3%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK------V 57
++R+ LP++ ++ L + NQ +++VGETGSGKTTQIPQ++ +A + V
Sbjct: 60 EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLV 119
Query: 58 GCTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSD 117
GCTQPRRVAA+SV+ RV+ EM V +G EVGYSIRFEDCTS +T+LKY+TDGM+LRE ++D
Sbjct: 120 GCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMAD 179
Query: 118 PKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAP 177
P LE Y V+++DEAHERTL+TD+L G+ K+++R R DLKL++ SATL+AEKF YF+ AP
Sbjct: 180 PLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAP 239
Query: 178 ILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEIL 237
+++VPGR +PVEI YT+ PE +Y++AAI T ++IH + GDILVFLTG+EEIE +
Sbjct: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 299
Query: 238 KERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP-------DGARKVVLATNIAETSL 290
+ + LG ++G + V P+Y+ LP +Q KIF P P RK+V++TNIAETSL
Sbjct: 300 NKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSL 359
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI YV+D G++K K YNP+ +ESLLV PISKASA QR+GR+GRT PGKCFRLYT
Sbjct: 360 TIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEK 419
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGA 410
S+ D++ T PEI R+NLAN +L LK LGIDDL++FDF+D P E L +ALE+L LGA
Sbjct: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ G LTK G M+EFPLDP +SKM++ S +F CSNEI++++A+LSV N F RP+ +
Sbjct: 480 LDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN-CFVRPREAQ 538
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTC 530
AD A+ F D GDH+ LLNVY+++K+N+ WC++NF+ R+MK A ++R QL
Sbjct: 539 KAADEAKARFGHID-GDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVR 597
Query: 531 LVERVGIELTSSLCNLE----AMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSG 586
++ R +++ S+ N ++KA+++G+ + A L++ G Y TVK Q VH+HPS+
Sbjct: 598 IMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 657
Query: 587 LAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
L P+ WVIY+E VLTT+ ++R VT+++ EWL ++A HYY L + + K
Sbjct: 658 LDHKPE-WVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAK 708
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/649 (52%), Positives = 466/649 (71%), Gaps = 17/649 (2%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK---VGCT 60
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ+ E + G V CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVAA+SVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILR 180
E Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQEEIETVEEILKE 239
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQEEI+ + +K
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 240 RIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTID 293
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 294 GIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQ 353
G+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y+
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 354 EDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQ 413
+M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P E L +ALELL L ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 414 VGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLA 473
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-CFVRPTEAKKAA 610
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
D A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ +++
Sbjct: 611 DEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 534 RVGIELTSSLCNLE----AMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQ 589
R + S+ ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDH 729
Query: 590 VPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + K
Sbjct: 730 KPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/650 (52%), Positives = 466/650 (71%), Gaps = 19/650 (2%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQPRRVAA+SVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQEEIETVEEILK 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQEEI+ + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P E L +ALELL L ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-CFVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGIELTSSLCNLE----AMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
+R + S+ ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLD 728
Query: 589 QVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + K
Sbjct: 729 HKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/650 (52%), Positives = 466/650 (71%), Gaps = 19/650 (2%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQ----YLHEAGYTKHGKVGC 59
K+R LP++ Y+++ + +Q V+VGETGSGKTTQIPQ Y+ K G V C
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRG-VAC 190
Query: 60 TQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQPRRVAA+SVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTDGM+LRE ++DP
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 250
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPIL 179
LE Y V+++DEAHERTL+TDIL+G+ K++VR RSDLK+++ SATLDA KF YF+ P+L
Sbjct: 251 LERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLL 310
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDILVFLTGQEEIETVEEILK 238
+PGR +PVEI YT PE +Y++AAI T ++IH + GD+L+FLTGQEEI+ + +K
Sbjct: 311 TIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIK 370
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAETSLTI 292
+ LG ++G++ + P+Y+ LP + Q +IF P P +GA RKVV++TNIAETSLTI
Sbjct: 371 REVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTI 430
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DG+ +V+D G++K K YNP+ +ESLLV ISKASA QRAGR+GRT PGKCFRLYT +Y
Sbjct: 431 DGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAY 490
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALN 412
+ +M+DNT PEI R+NL +V+L LK LGIDDL++FDF+D P E L +ALELL L ALN
Sbjct: 491 KTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALN 550
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G+LT++G MAEFPLDP L+KM++AS + CSNE+++I A+LSV F RP K
Sbjct: 551 DDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-CFVRPTEAKKA 609
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
AD A+M F D GDH+ LLNVY+++K+N S QWCYDNFI +RS+ A ++R QL+ ++
Sbjct: 610 ADEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 533 ERVGIELTSSLCNLE----AMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLA 588
+R + S+ ++KA+++G+ + A L++ G Y TVK Q V +HPS+ L
Sbjct: 669 DRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLD 728
Query: 589 QVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKK 638
P+ WV+Y+E VLTTK Y+R T++KPEWL +IAP YY + + K
Sbjct: 729 HKPE-WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAK 777
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/641 (49%), Positives = 465/641 (72%), Gaps = 7/641 (1%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPR 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQPR
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 586
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+SVA RVS EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHY 646
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+A+F PI +PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPG 706
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQE+IE + + E + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 766
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 767 LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 825
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 826 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 885
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP++ + ++ L+ LGAL+ G LT GR
Sbjct: 886 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 945
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSV-PAIFYRPKGREEESDQIREKFAVP 1004
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH+ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1005 ES-DHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1063
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1064 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1122
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPR 641
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R
Sbjct: 1123 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRR 1163
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/641 (49%), Positives = 466/641 (72%), Gaps = 7/641 (1%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPR 63
++R+ LPI+ ++++L +++N +V++VGETGSGKTTQ+ QYLHE GYT +G +GCTQPR
Sbjct: 527 EQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPR 586
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+SVA RVS EMG LG EVGY+IRFEDCTSE T++KYMTDG++LRE L + L+ Y
Sbjct: 587 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHY 646
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHER+L+TD+L G+ +++V RSDLKL+++SAT+DAEKF+++F PI +PG
Sbjct: 647 SAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPG 706
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
R +PV+I ++K P+ +Y++AA+ +L++H + A GDIL+F+ GQE+IE + + E + +
Sbjct: 707 RTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 766
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L L V P+Y+ LP++LQAKIF PDG RK ++ATNIAETSLT+DGI +V+DSGY
Sbjct: 767 LENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 825
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
K+K +NP+ GM++L +YPIS+A+A QR+GR+GRTGPG+CFRLYT ++Y+ ++ TVPE
Sbjct: 826 CKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPE 885
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGRQ 423
IQRTNLANV+L+LK+LG+ DLL F F+D PP++ + ++ L+ LGAL+ G LT GR
Sbjct: 886 IQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRL 945
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M EFPLDP LSKM++ S CS+EI+ I ++LSV ++FYRPK ++ +D R F
Sbjct: 946 MVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSV-PAIFYRPKGREEESDQIREKFAVP 1004
Query: 484 DAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSL 543
++ DH++ LNVY WK N+YS WC D+FI ++M+ R++R QL ++ + + L S
Sbjct: 1005 ES-DHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG 1063
Query: 544 CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHEL 600
+ + ++K I + + A+L+ G Y ++ H+HP+S G+ P +++YHEL
Sbjct: 1064 TDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPD-YIVYHEL 1122
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPR 641
V+TTKEYM+ VT + EWL E+ P +Y +K R++ R
Sbjct: 1123 VMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRR 1163
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/651 (52%), Positives = 456/651 (70%), Gaps = 24/651 (3%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE--------AGYTKHG 55
++R LP++ Y+E+ + ++ NQ + +VGETGSGKTTQIPQ+ E +
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 56 KVGCTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREML 115
V CTQPRRVAA+SVA RV+ EM V LG EVGYSIRFEDC SE+TVLKY TDGM+LRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 116 SDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF 175
+ P L+ Y VL++DEAHERTL+TDIL+G+ K++VR R+D+K++I SATLDA KF YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 176 APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQ-ASGDILVFLTGQEEIETVE 234
P+L VPGR +PVEI +T E +Y++AAI T ++IH + GDIL+FLTGQEEIE
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 235 EILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA--RKVVLATNIAET 288
+ + I+ LG G L P+Y+ LP Q +IF P P +GA RK V++TNIAET
Sbjct: 311 KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 289 SLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYT 348
SLTIDG+ +V+D G+SK K YNP+ +ESLLV PISKASAMQRAGR+GRT PGKCFRLYT
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 349 INSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYAL 408
+Y +M+D T PEI R+NL +V+L LK LG +DL++FDF+D P E L +ALELL L
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYL 490
Query: 409 GALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN 468
A+N GELT++G MAEFPLDP L+KM++ S + CSNEI++I A+LSV + RP
Sbjct: 491 QAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVP-QCWVRPNE 549
Query: 469 KKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQL 528
+ AD A+ F D GDH+ LLNVY+S+K+N QWCYDNFI +R+MK A +R QL
Sbjct: 550 MRTEADEAKARFAHID-GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
Query: 529 TCLVE-----RVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHP 583
+ +++ RV + S L ++KA+++GF + A L+++G Y TVK Q V++HP
Sbjct: 609 SRVMDKYNLRRVSTDFKSRDYYLN-IRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 584 SSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED 634
S+ L P+ W +Y+E VLTTK ++R VT+++PEWL +IAP YY L + D
Sbjct: 668 STVLDHKPE-WALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPD 717
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/642 (47%), Positives = 468/642 (72%), Gaps = 8/642 (1%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
++++R+ LP++ R++++ ++EN VV+IVGETGSGKTTQ+ QYL E G+ G +GCTQ
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQ 493
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAA+SVA RV+ EMGV LG +VGY+IRFEDCTSEKT++KYMTDG++LRE L D L+
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF-APILR 180
YS +++DEAHER+L+TD+L G+ ++++ R+DLKL+++SAT+DA+KF+ +F P
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 181 VPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKER 240
+PGR +PVE+ + + P +Y+DAA+ + IH GDIL+F+ GQE+IE E++KE+
Sbjct: 614 IPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEK 673
Query: 241 IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVD 300
+ +L + L V P+Y+ LP++LQAKIF P G RK ++ATNIAETSLT+DGI +V+D
Sbjct: 674 LGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVID 732
Query: 301 SGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNT 360
G+ KMK YNP+ GM++L ++P+S+ASA QR GR+GRTGPG+C+RLYT +++++ +T
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKST 792
Query: 361 VPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKV 420
VPEIQRTNLANV+L+LK+LG+DDLL F F+D+PPQ+ + ++ L+ LGAL+ G+LT +
Sbjct: 793 VPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPM 852
Query: 421 GRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNF 480
GR+M EFPLDP LSKM++ S + CS+E++TI ++LSV ++F+RPK ++ AD A+
Sbjct: 853 GRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSV-PAIFFRPKGREEEAD-AKKEK 910
Query: 481 YQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELT 540
+Q DH+ LNVY W+ + YS +WC DN++ +++K R++R QL +++ + + L
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLI 970
Query: 541 SSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIY 597
S+ + ++K I S + + ARL+ G Y V+ +HP+S G+ +P +V+Y
Sbjct: 971 SNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPD-YVVY 1029
Query: 598 HELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKM 639
HEL++T KEYM+ VT + WL E+ P +Y +K+ + RK++
Sbjct: 1030 HELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKEL 1071
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/649 (51%), Positives = 460/649 (70%), Gaps = 29/649 (4%)
Query: 6 RKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQPR 63
R+ LP+Y RE+ L+ ENQ++V VGETGSGKTTQIPQ++ E + + ++ CTQPR
Sbjct: 72 RRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPR 131
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+SVA RV+ EM V LG EVGY+IRFEDC+ T+LKYMTDGM+LRE ++D L Y
Sbjct: 132 RVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRY 191
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
S +++DEAHERTL+TDIL+G+ K L R DLK+++ SATLDA+KF YF AP+L VPG
Sbjct: 192 SCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPG 251
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIET--------VEE 235
R YPVEI+YT+ PE +Y++AA+ T L+IH + GDILVFLTG+EEIE ++
Sbjct: 252 RTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADD 311
Query: 236 ILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDG-----ARKVVLATNIAETSL 290
+++E G L V P+Y +LP Q +IF PTP+ RKVV++TNIAETSL
Sbjct: 312 LVRE------GAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSL 365
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI YVVD G+SK K YNP+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT
Sbjct: 366 TIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 425
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGA 410
++++++ + T PEI R+NL++ +L LK LGIDDL++FD++D P E + +ALE L L
Sbjct: 426 AFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNC 485
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ G+LT +GR+ +EFPLDP L+ M++ S +F CSNE++++ ALLSV N VF RP + +
Sbjct: 486 LDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNSAR 544
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTC 530
LAD R F D GDH+ LLNVY+++K + + WC+++F+ R++ A ++R QL
Sbjct: 545 KLADEMRQQFTHPD-GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRR 603
Query: 531 LVERVGIELTSSLCNLE----AMKKAIISGFLLHTARLQKNG-SYWTVKHPQKVHVHPSS 585
+ER +EL S+ + + +++A++SGF + A+ NG +Y T+K Q V +HPS
Sbjct: 604 TMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSC 663
Query: 586 GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED 634
GL+ P+ WV+Y+E VLTTK ++R VT ++PEWL E+AP+YY L D ++
Sbjct: 664 GLSVTPE-WVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDN 711
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/632 (51%), Positives = 457/632 (72%), Gaps = 12/632 (1%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCTQP 62
++RK LP++ +E ++ ++ENQVV++VGETGSGKTTQIPQ++ +AG + GK VG TQP
Sbjct: 72 EKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQP 131
Query: 63 RRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLES 122
RRVAAISVA RVS EM +LG EVGYSIRFE+ +S +T +KY+TDGM+LRE +SDP L
Sbjct: 132 RRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNK 191
Query: 123 YSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVP 182
Y V+++DEAHERTLSTDIL G+ KD+++ R DLKL++ SATL+A KF YF AP+++VP
Sbjct: 192 YDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVP 251
Query: 183 GRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIR 242
GR +PVEI YT+ +Y+++A+ T ++IH + +GDILVFLTG+EEIE ++ R
Sbjct: 252 GRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETR 311
Query: 243 KLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
+ G + + P+Y++LP Q+KIF + RK +++TNIAETSLTIDGI +VVD G
Sbjct: 312 ERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPG 367
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVP 362
+SK K YNP++ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT +++E M T P
Sbjct: 368 FSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHP 427
Query: 363 EIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGR 422
EI R+NLA+V+L L LG+ DL++FDF+D P + L +ALE+L+ LGAL+ G+LT++G
Sbjct: 428 EILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGS 487
Query: 423 QMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQ 482
M+EFPLDP LSKM++ S + CSNEI+TIAA+LS N F RPK+ + AD+A+ +F
Sbjct: 488 IMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPN-CFMRPKDNRIEADSAKKSFDH 546
Query: 483 GDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS 542
D GDH+ +LNVY+S+K+N WCYDNF+ R++K A +R QL ++ R + L S
Sbjct: 547 FD-GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSG 605
Query: 543 LCN----LEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYH 598
N E +KK I +GF + A+ +K Y+T+ Q V HPS+GL + P+ + IY+
Sbjct: 606 DVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRRPE-FCIYN 664
Query: 599 ELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
E VLT++ Y+R +T++K +WL E+AP Y+ K
Sbjct: 665 EFVLTSENYIRTITDVKFDWLLELAPSYFKQK 696
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/662 (52%), Positives = 470/662 (70%), Gaps = 29/662 (4%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYL--HEAGYTKHGKVGCTQ 61
K R+ LP++ R++ L+ Q NQ++V VGETGSGKTTQIPQ++ E + ++ +V CTQ
Sbjct: 88 KIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQ 147
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAA+SVA RV+ EM VKLG EVGYSIRFE+ TS KT+LKYMTDGM+LRE + D L
Sbjct: 148 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLS 207
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
YS +++DEAHERTL+TDIL+G+ K +V+ R DLK++I SATLDAEKF YFN AP+L V
Sbjct: 208 RYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAV 267
Query: 182 PGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIE-TVEEILKER 240
PGR YPVE++YT + +Y+D+AI T L+IHAT+ +GDIL+FLTG++EIE V +I E
Sbjct: 268 PGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEG 327
Query: 241 ---IRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDG-----ARKVVLATNIAETSLTI 292
+R+ G G L V P+Y +LP Q +IF P P+ RKVV++TNIAETSLTI
Sbjct: 328 DQLVREEGC--GPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI 385
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
DGI YVVD G+SK K YNP+ +ESLLV PISKASA QRAGR+GRT PGKCFRLYT ++
Sbjct: 386 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 445
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALN 412
Q+++ + + PEI R+NL++ +L LK LGIDDL++FDF+D P E + +ALE L L L+
Sbjct: 446 QKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLD 505
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G LT +GR ++FPLDPML+ M++ S +F+CS EI+TI A+LSV N VF RP K
Sbjct: 506 DEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDKKR 564
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSK----QWCYDNFIQFRSMKHARDIRDQL 528
AD+A+ F D GDHI LLNVY+++K ++ + +WC D+++ +RS+ A +IR QL
Sbjct: 565 ADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQL 623
Query: 529 TCLVERVGIELTS----SLCNLEAMKKAIISGFLLHTARLQKNGS--YWTVKHPQKVHVH 582
L+ R +EL + S + ++KA+ SGF + A+ +++G+ Y TVK Q V +H
Sbjct: 624 ERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIH 682
Query: 583 PSSGLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVE--DLRKKMP 640
PS+ L WVIY+E VLT+K Y+R VT ++PEWL EIAP YY L + + D++ +
Sbjct: 683 PSTVLGH-DAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLE 741
Query: 641 RV 642
R+
Sbjct: 742 RI 743
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/632 (50%), Positives = 456/632 (72%), Gaps = 8/632 (1%)
Query: 3 QKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQP 62
+++R+ LP + REQ+L +++NQV+++VGETGSGKTTQ+ Q+L+E GY ++G +GCTQP
Sbjct: 486 REQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQP 545
Query: 63 RRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLES 122
RRVAA+SVA RVS EMGV+LG VGYSIRFED T TV+KYMTDG++LRE L LE
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 123 YSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVP 182
YSV+++DEAHER+L+TDIL+G+ K ++ R D+KLL++SAT++++KFS +F AP +P
Sbjct: 606 YSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIP 665
Query: 183 GRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIR 242
GR YPV+I + KAP S+Y++AA+ L+IH +Q +GDILVF+TGQE+IE EI+ +R+
Sbjct: 666 GRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLN 725
Query: 243 KLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
+L L + P+Y+ +P +LQAKIF G RKVV+ATNIAETSLT+ GI YVVD+G
Sbjct: 726 QL-HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTG 784
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVP 362
Y K+K YN K G+++L V PIS+A+A QRAGR+GRTGPG +RLYT +Y +M + T+P
Sbjct: 785 YCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLP 844
Query: 363 EIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGR 422
EIQRTNL+N +LILK+LG++++ +FDF+D PP + L +L L+ LGAL+ G+LT +G+
Sbjct: 845 EIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGK 904
Query: 423 QMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQ 482
+M+ FP+DP LSK+I+ ++ +KC+ EIITI ++LSV SVFYRPK + +D AR F
Sbjct: 905 KMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAEESDAAREKFNV 963
Query: 483 GDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSS 542
++ DH+ LLN+Y W+ N YS WC +F+ +++K ARDIR QL ++ + I L S
Sbjct: 964 PES-DHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISL-ES 1021
Query: 543 LCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS---GLAQVPKRWVIYHE 599
+ + + +++ + S + A + G Y ++ H+H +S GL +P +VIYHE
Sbjct: 1022 VSDWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPD-YVIYHE 1080
Query: 600 LVLTTKEYMRQVTELKPEWLFEIAPHYYMLKD 631
LVLT+KEYM VT + P WL E YY +K+
Sbjct: 1081 LVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 621 bits (1602), Expect = e-177, Method: Compositional matrix adjust.
Identities = 328/662 (49%), Positives = 445/662 (67%), Gaps = 38/662 (5%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK--VGC 59
+Q+ RK LP++ Y++++L+ +++NQV++I+GETGSGKTTQ+PQYL E G+T GK +
Sbjct: 216 IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAI 275
Query: 60 TQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTS-EKTVLKYMTDGMVLREMLSDP 118
TQPRRVAA SVAARV+ EM V LG EVGY IRFED T+ KTVLKYMTDGM+LRE L+D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
KL YS +M+DEAHERTL+TDIL+G+ KD++ R LKLLISSAT++A+KFS +F+ PI
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPI 395
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQA-SGDILVFLTGQEEIETVEEIL 237
VPGRRYPV+IHYT PE+NYI AAI T +IH TQ+ GDILVFLTGQEEIE + L
Sbjct: 396 FNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKL 455
Query: 238 KERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKY 297
+E + KLG++ ++I+ P+YANLP E Q KIF PTP+ RKVVLATNIAETSLTIDGI+Y
Sbjct: 456 EEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRY 515
Query: 298 VVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDME 357
V+D G+ K Y P TGM LL P S+AS QRAGR+GR GPGKCFR++T SY ++E
Sbjct: 516 VIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELE 575
Query: 358 DNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGEL 417
PEI RTNL+N +L+L +LG+ DL+ F +D P LRK+LE LY LGALN G +
Sbjct: 576 LMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTI 635
Query: 418 TKVGRQMAEFPLDPMLSKMI-VASDKFKCSN---EIITIAALLSVGNSVFYRPKNKKFLA 473
T++G+ M EFP +P +K++ A+ +C E +TI ++L S+F K
Sbjct: 636 TRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQKR----- 690
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
+A + DHI L ++N W+ + +S+ WC D+ IQF++M R+IR+QL E
Sbjct: 691 -DAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSE 749
Query: 534 RVGI-----ELTSSLCNLEA-----MKKAIISGFLLHTARLQKNGSYWTVKHPQ---KVH 580
+VG+ + + N+ + + ISGF ++ +L G Y T+ V
Sbjct: 750 KVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVS 808
Query: 581 VHPSSGL-------AQVPKRWVIYHELVLTTKEYMRQVTEL-KPEWLFEIAPHYYMLKDV 632
VHP+S L AQ P ++V+Y +L+LT+KE++R + K EWL ++ P + KD+
Sbjct: 809 VHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIF--KDL 866
Query: 633 ED 634
D
Sbjct: 867 ID 868
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 612 bits (1577), Expect = e-174, Method: Compositional matrix adjust.
Identities = 305/643 (47%), Positives = 445/643 (69%), Gaps = 21/643 (3%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L ++ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QPRRVAA++VA RV+ E G LGHEVGY IRF+DCT + T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----- 174
L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDA+KF +FN
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 175 -----FAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEE 229
IL V GR +PV+I Y ++P +YI + + T ++IH T+ GDIL FLTGQEE
Sbjct: 227 DPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEE 286
Query: 230 IETVEEILKERIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ETV +L E+ R L + G L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLY 406
YT ++ + + +TVPE+QR+NLA VIL LK LGID++L F F+ PP + + +ALELLY
Sbjct: 406 YTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 ALGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
ALG L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LNVY ++ +++ + QWC ++F+ ++ + A +R
Sbjct: 524 PPNQKSQAIRVHRKF-AVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + SS + + + + I+SGF + AR G+Y T++ ++H+HP+S
Sbjct: 583 EQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYY 627
L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+Y
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 305/658 (46%), Positives = 449/658 (68%), Gaps = 21/658 (3%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKV-GCT 60
++++R+ LP++ R +L ++ Q VVIVGETG GK+TQIPQYL EAG+T G+V G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSE-KTVLKYMTDGMVLREMLSDPK 119
QPRRVAA++VA RV+ E G LGHEVGY IRF+DCT + T +K++TDGM++REM+ DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFN----- 174
L YSV+M+DEAHERTL TDI +G+ K + + R DL+L+++SATLDA+KF +FN
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 175 -----FAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEE 229
IL V GR +PV+I Y ++P +YI + + T ++IH T+ GD+L FLTGQEE
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 230 IETVEEILKERIRKLGTKIG---ELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIA 286
+ETV +L E+ R L + G L V P+YA LP+ Q K+F RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALA-RTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 287 ETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRL 346
ETS+TI GI YV+D G+ K++ YNP+T +E L+V P+S+ASA QRAGR GR+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 347 YTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLY 406
YT ++ + + +TVPE+QR+NLA VIL LK LGID++L F F+ PP + + +ALELLY
Sbjct: 406 YTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLY 464
Query: 407 ALGALNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYR 465
ALG L++ LT+ +G ++AEFPL+PM +KM++ S F CS EI++IAA++ + N +F
Sbjct: 465 ALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVV 523
Query: 466 PKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
P N+K A F + GDH+ +LN+Y ++ +++ +WC ++F+ ++ + A +R
Sbjct: 524 PPNQKSHAIRVHRKF-AVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 582
Query: 526 DQLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS 585
+QL L+ + + SS + + + + I+SGF + AR G+Y T++ ++H+HP+S
Sbjct: 583 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 642
Query: 586 GL-AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPRV 642
L A+ P RWVIY+E++ T+K YMR VT ++ WL E+APH+Y L+ K +V
Sbjct: 643 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKV 700
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/651 (48%), Positives = 457/651 (70%), Gaps = 21/651 (3%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTK-HGK-VGC 59
++ ++ LP++ R Q+L ++ENQVVVI+GETGSGKTTQ+ QYL+E GY GK +
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 60 TQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCT-SEKTVLKYMTDGMVLREMLSDP 118
TQPRRVAAISVA RV+ EM V LG EVGYSIRFED T SE T LK++TDG++LRE L D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L+ YS +++DEAHER+L+TDILLG FK L+ R DLKL+I+SAT++A+KFSA+F AP
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQ--ASGDILVFLTGQEEIETVEEI 236
+PGR +PV+ YT P +Y++AA+ ++IH +SGDIL+F+TGQE+IET +
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 237 LKERI-----RKLGT----KIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAE 287
L+E+ +K GT +I ++ + P+Y+ LP +LQ KIF RK+++ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 288 TSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLY 347
TSLTI GI+YV+D GYSK+K YNPK G++SL++ PISKA+A QR+GR+GRT PG +RLY
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 348 TINSYQEDMEDNTVPEIQRTNLANVILILKNLGI-DDLLNFDFLDSPPQELLRKALELLY 406
T ++++EDM T+PEIQRTNL+N +L+LK+L + D+L F F+D PP + +L L+
Sbjct: 703 TEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELW 762
Query: 407 ALGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP 466
+GA++ G+LT +G QMA+FPL P LSK+++ + + CS+E++TI ++LSV VFYRP
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQ-VFYRP 821
Query: 467 KNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRD 526
K ++ AD AR F+ + DH+ LLNV+ W+ N++S WC +F+Q++S+ ARDIRD
Sbjct: 822 KERQKEADIARNKFFIAKS-DHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRD 880
Query: 527 QLTCLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSS- 585
QL +++ I + SS + + +KK I SGF A++ +Y +K V +HP+S
Sbjct: 881 QLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSA 940
Query: 586 --GLAQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVED 634
GL +P +V+YHEL++T+KEY+ VT + P WL E Y +K +++
Sbjct: 941 LHGLGDLPP-YVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRIKN 990
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/626 (46%), Positives = 431/626 (68%), Gaps = 6/626 (0%)
Query: 4 KERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPR 63
++RK LPI+ + + + +Q+N+V+V+VGETGSGK+TQIPQ+L+E Y + G V TQPR
Sbjct: 91 EQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPR 150
Query: 64 RVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESY 123
RVAA+++A RV+ E G +LG +VGYSIRF+D TS+KT +KY+TDGM+LRE+++DP L Y
Sbjct: 151 RVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQY 210
Query: 124 SVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPG 183
L++DEAHERTL TD+LLG K +++ R L+++I SATL+AE+FS +F+ A I + G
Sbjct: 211 HTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISG 270
Query: 184 RRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
R+YPV+IHYT PE +Y+DA + T ++H GDILVFLTGQ+EIE +E ++K ++
Sbjct: 271 RQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQ 330
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
L + + ++ CP++A+LP E Q ++F+P RKVVL+TNIAETS+TI GI+YV+D+G
Sbjct: 331 LPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGL 390
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
+K+K +N K G+ESL V PIS+++AMQR+GR+GR G+C+R+YT + + + T+PE
Sbjct: 391 AKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKETIPE 449
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELTKVGRQ 423
I+R +L+ +L LK G +D++NF ++D P +E L +ALE LY++GAL+ G + +G Q
Sbjct: 450 IKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQ 509
Query: 424 MAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNARMNFYQG 483
M+ PL P L++ ++A+ + C +E+I + + LS +S+F P+ K+ A AR+ F
Sbjct: 510 MSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLST-DSMFLFPQEKRDEAIEARLKFLHS 568
Query: 484 DAGDHIALLNVYNSWKEN--DYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERVGIELTS 541
+ GD + LN + E+ D KQWC NFI R++K DIR QL + G EL S
Sbjct: 569 E-GDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNS 627
Query: 542 SL-CNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWVIYHEL 600
S N E + + +SG++ +TA L +GSY T+ Q + +HPSS L ++YHEL
Sbjct: 628 SPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHEL 687
Query: 601 VLTTKEYMRQVTELKPEWLFEIAPHY 626
V TTK Y+R V+ ++ WL +APHY
Sbjct: 688 VFTTKSYVRGVSSIRSNWLNAVAPHY 713
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 288/638 (45%), Positives = 414/638 (64%), Gaps = 12/638 (1%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
L+ +R++LPI+ R Q+L ++ V++GETGSGKTTQIPQYL+E G ++ G + TQ
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQ 117
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRRVAAIS+A RVS E +LG VGY++RFED TSE T +K++TDGM+LRE +SD L
Sbjct: 118 PRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLR 177
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFA 176
YS +++DEAHERT+ TD+L G+ K + R + LK+++ SAT+D + FS YFN A
Sbjct: 178 KYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRA 237
Query: 177 PILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-TQASGDILVFLTGQEEIETVEE 235
P+L + GR++P++I YTK P+ +Y+ AA+V+ +IH AS DILVFLTGQEEIE + +
Sbjct: 238 PVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSK 297
Query: 236 ILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGI 295
++ R L ++V P+YA+LP Q ++F P G RKV+++TNIAETS+TI GI
Sbjct: 298 TCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGI 357
Query: 296 KYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQED 355
KYVVD+G K K YNP +G+E L V +SK A QR GR+GR G C+RLYT + + E
Sbjct: 358 KYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EK 416
Query: 356 MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVG 415
E TVPEIQR NLA+VIL L + + ++L FDF+ P + + A+ L LGAL
Sbjct: 417 FEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKD 476
Query: 416 E---LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
+ LT +GR+MA FPL+P +K I+ S KF C+ EI+TI +LLSV +SV Y P ++
Sbjct: 477 DQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRDE 535
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLV 532
+ R F + GDHI LLN+Y ++K +K WC +NF+ ++M ++R QL +
Sbjct: 536 VQSVRKKFISSE-GDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREIC 594
Query: 533 ERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPK 592
++ + + SS ++E++++ + ++TA LQ +G+Y T Q V +HPSS L
Sbjct: 595 LKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKP 654
Query: 593 RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
V+Y L+ T K YMR + + EWL+E AP Y+ K
Sbjct: 655 ACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/635 (43%), Positives = 414/635 (65%), Gaps = 12/635 (1%)
Query: 5 ERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRR 64
+R++LPI+ R Q+L ++ V++GETGSGKTTQIPQYL+E G ++ G + TQPRR
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 129
Query: 65 VAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYS 124
VAAIS+A RVS E +LG VGY++RF+D TSE T +K++TDGM+LRE +SD L YS
Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 189
Query: 125 VLMVDEAHERTLSTDILLGIFKDLVRLRSD-----LKLLISSATLDAEKFSAYFNFAPIL 179
+++DEAHERT+ TD+L G+ K + R + LK+++ SAT+D + FS YFN AP+L
Sbjct: 190 CVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVL 249
Query: 180 RVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHA-TQASGDILVFLTGQEEIETVEEILK 238
+ GR++P+++ YTK P+++Y+ AA+V+ +IH +S DILVFLTGQEEIE + + +
Sbjct: 250 YLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCR 309
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+ + L ++V P+YA+LP Q ++F P G RKV+++TNIAETS+TI GIKYV
Sbjct: 310 DIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYV 369
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
VD+G K K YNP +G+E L V +SK A QR GR+GR G C+RLYT + + E +
Sbjct: 370 VDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDK 428
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGE-- 416
TVPEIQR NLA+V+L L + + ++L FDF+ P + ++ A+ L LGAL +
Sbjct: 429 MTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQL 488
Query: 417 -LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADN 475
LT +GR+MA FPL+P +K I+ S KF C+ EI+TI +LLSV +SV + P +++
Sbjct: 489 TLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQG 547
Query: 476 ARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVERV 535
R F + GDH+ LLN+Y ++K +K WC +NF+ ++M ++R QL + ++
Sbjct: 548 VRKKFISSE-GDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKM 606
Query: 536 GIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKRWV 595
+ + SS ++E++++ + + TA LQ +G+Y T Q V +HPSS L V
Sbjct: 607 SMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACV 666
Query: 596 IYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLK 630
+Y EL+ T K YMR + + +WL+E AP Y+ K
Sbjct: 667 VYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust.
Identities = 288/658 (43%), Positives = 423/658 (64%), Gaps = 26/658 (3%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGK-VGCT 60
+Q++R LPI+ R +L + + ++IVGETG GK+TQ+PQ+L EAG+ G+ + T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRRVA +++A RV+ E LGH+VGY++RF+D + + T +K+MTDG++LRE+L+DP L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNF----- 175
YS++M+DEAHER+ +TDILLG+ + ++++R+DL++++SSATLDAE F +F
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGN 249
Query: 176 -----APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEI 230
A I+ V GR +PV +H+TK +Y +A+ T + IH + GDILVFLTGQ+E+
Sbjct: 250 SDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 231 ETVEEILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
E V E L+E L L V P Y LP Q K F TP G RKVV+ATNIAE S+
Sbjct: 310 EDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASI 368
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TI GI YV+D+GY K++ + G+E+L+ +SKASA QRAGR+GR PGKC+RLY +
Sbjct: 369 TIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPES 428
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGA 410
+ E + TVPEIQR +A+ IL LK LG+ ++ F +L PP + LELLYALGA
Sbjct: 429 EF-ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGA 487
Query: 411 LNQVGELTK-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
+++ +LT +G QMAEFPL PM SK ++ S +F CS E++TI A++ + VF P +
Sbjct: 488 IDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITPYRQ 546
Query: 470 KFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLT 529
+ AD R F + GDH+ +LNV+ + EN SK+WC D+F+ +R + A ++R QL
Sbjct: 547 RHQADVIRKKFAV-EEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLV 605
Query: 530 CLVERVGIELTSS--LCNL-EAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSG 586
L++R IE SS L N E +++ +++GF A+ G Y TVK +++ S
Sbjct: 606 RLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSS 665
Query: 587 L---AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDLRKKMPR 641
+ PK WVI+ E++ ++ +R VT ++PEWL+E+APHYY +L +K R
Sbjct: 666 IMFKKDYPK-WVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMR 719
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/451 (55%), Positives = 335/451 (74%), Gaps = 9/451 (1%)
Query: 102 LKYMTDGMVLREMLSDPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISS 161
+KYMTDGM+LRE ++DP LE Y V+++DEAHERT++TDIL+G+ K++ + RSDLKL++ S
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 162 ATLDAEKFSAYFNFAPILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIH-ATQASGDI 220
ATLDA KF YF+ AP++ VPGR +PVEI YT PE +Y++AAI T ++IH + GD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 221 LVFLTGQEEIETVEEILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTP----DGA 276
L+FLTGQEEIE + +K + LG ++G+L P+Y+ LP +Q +IF P +GA
Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGA 180
Query: 277 --RKVVLATNIAETSLTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGR 334
RKVV++TNIAETSLTIDG+ +V+D G++K K YNP+ +ESLLV PISKASA QR GR
Sbjct: 181 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGR 240
Query: 335 SGRTGPGKCFRLYTINSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPP 394
+GRT PGKCFRLYT +Y +M+DNT PEI R+NL V+L LK LGIDDL++FDF+D P
Sbjct: 241 AGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 300
Query: 395 QELLRKALELLYALGALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAA 454
E L +ALELL LGAL+ G+LT++G MAEFPLDP L+KM++AS + CSNEI+++ A
Sbjct: 301 PETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTA 360
Query: 455 LLSVGNSVFYRPKNKKFLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQ 514
+LSV F RP K LAD A+M F D GDH+ LLNVY+++K+N+ QWCYDNFIQ
Sbjct: 361 MLSVPQ-CFLRPNEAKKLADEAKMRFAHID-GDHLTLLNVYHAFKQNNEDPQWCYDNFIQ 418
Query: 515 FRSMKHARDIRDQLTCLVERVGIELTSSLCN 545
+RS+K A +R QL +++R ++ TS+ N
Sbjct: 419 YRSLKSADSVRQQLARIMDRFALQRTSTNFN 449
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/674 (39%), Positives = 418/674 (62%), Gaps = 36/674 (5%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVAA 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 ISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
ISVA RV+ EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRS-----DLKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APE----SNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEI 236
GR YPV + P + YI A + T++IH + +GDILVFLTGQ EIE E+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 237 LKERIRKLG-------TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETS 289
L + + T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 290 LTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTI 349
LTIDGI+YVVD G+ K +NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 350 NSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALG 409
+ + + M D+ +PEI+RT+L +V+L LK L I D++ F +LD P + L+ +AL+ LY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
A+++ G +T++G M EFPL P L+ ++ + C + ++ IAA+LSV N VF RP +
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDP 530
Query: 470 KFLAD----NARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
++ + + + G D L ++ K + WC ++I +R + A +
Sbjct: 531 EYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVE 590
Query: 526 DQLTCLVERVGIEL-----TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKV 579
QL L+ ++ + T E +++ + +G+ + AR ++ T+ V
Sbjct: 591 AQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPV 650
Query: 580 HVHPSSGLAQVPKR--WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL-- 635
H+HPSS L + + W+I+HE+++TTK Y R V ++ EW+ ++ P + L + DL
Sbjct: 651 HIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEL-NAHDLSS 709
Query: 636 --RKKMPRVAGRPW 647
R++M A R W
Sbjct: 710 VARREMRDDARRKW 723
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/673 (39%), Positives = 418/673 (62%), Gaps = 34/673 (5%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVAA 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 ISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
ISVA RV+ EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRS-----DLKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APE----SNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEI 236
GR YPV + P + YI A + T++IH + +GDILVFLTGQ EIE E+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 237 LKERIRKLG-------TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETS 289
L + + T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 290 LTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTI 349
LTIDGI+YVVD G+ K +NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 350 NSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALG 409
+ + + M D+ +PEI+RT+L +V+L LK L I D++ F +LD P + L+ +AL+ LY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
A+++ G +T++G M EFPL P L+ ++ + C + ++ IAA+LSV N VF RP +
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDP 530
Query: 470 KFLAD----NARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
++ + + + G D L ++ K + WC ++I +R + A +
Sbjct: 531 EYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVE 590
Query: 526 DQLTCLVERVGIEL-----TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKV 579
QL L+ ++ + T E +++ + +G+ + AR ++ T+ V
Sbjct: 591 AQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPV 650
Query: 580 HVHPSSGLAQVPKR--WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL 635
H+HPSS L + + W+I+HE+++TTK Y R V ++ EW+ ++ P H + D+ +
Sbjct: 651 HIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSV 710
Query: 636 -RKKMPRVAGRPW 647
R+++ A R W
Sbjct: 711 ARREVREDARRRW 723
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/674 (39%), Positives = 417/674 (61%), Gaps = 36/674 (5%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVAA 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 ISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
ISVA RV+ EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRS-----DLKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APE----SNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEI 236
GR YPV + P + YI A + T++IH + +GDILVFLTGQ EIE E+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 237 LKERIRKLG-------TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETS 289
L + + T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 290 LTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTI 349
LTIDGI+YVVD G+ K +NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 350 NSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALG 409
+ + M D+ +PEI+RT+L +V+L LK L I D++ F +LD P + L+ +AL+ LY
Sbjct: 412 EFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
A+++ G +T++G M EFPL P L+ ++ + C + ++ IAA+LSV N VF RP +
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDP 530
Query: 470 KFLAD----NARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
++ + + + G D L ++ K + WC ++I +R + A +
Sbjct: 531 EYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVE 590
Query: 526 DQLTCLVERVGIEL-----TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKV 579
QL L+ ++ + T E +++ + +G+ + AR ++ T+ V
Sbjct: 591 AQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPV 650
Query: 580 HVHPSSGLAQVPKR--WVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYMLKDVEDL-- 635
H+HPSS L + + W+I+HE+++TTK Y R V ++ EW+ ++ P + L + DL
Sbjct: 651 HIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEL-NAHDLSS 709
Query: 636 --RKKMPRVAGRPW 647
R++M A R W
Sbjct: 710 VARREMREDARRKW 723
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/673 (39%), Positives = 418/673 (62%), Gaps = 34/673 (5%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVAA 67
T PI R+++++AV++N +++ G TGSGKTTQ+P+YL+EAG+++HG +G TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 68 ISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
ISVA RV+ EM LG +VGY +RF+DC+S++T +KYMTDG +L+ +L DP L +SV++
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRS-----DLKLLISSATLDAEKFSAYFNFAPILRVP 182
+DEAHERTL+TDIL G+ K L + +S LK+++ SAT++ K SA+F PI +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 183 GRRYPVEIHYTK--APE----SNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEI 236
GR YPV + P + YI A + T++IH + +GDILVFLTGQ EIE E+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 237 LKERIRKLG-------TKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETS 289
L + + T + L++ P Y ++ T+ Q +IF+P P G RK V++TNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 290 LTIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTI 349
LTIDGI+YVVD G+ K +NP+ G++ L V PISK+ A+QR+GR+GRT GKCFR+Y+
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 350 NSYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALG 409
+ + + M D+ +PEI+RT+L +V+L LK L I D++ F +LD P + L+ +AL+ LY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 410 ALNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNK 469
A+++ G +T++G M EFPL P L+ ++ + C + ++ IAA+LSV N VF RP +
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDP 530
Query: 470 KFLAD----NARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIR 525
++ + + + G D L ++ K + WC ++I +R + A +
Sbjct: 531 EYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVE 590
Query: 526 DQLTCLVERVGIEL-----TSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVK-HPQKV 579
QL L+ ++ + T E +++ + +G+ + AR ++ T+ V
Sbjct: 591 AQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPV 650
Query: 580 HVHPSSGLAQVPKR--WVIYHELVLTTKEYMRQVTELKPEWLFEIAP--HYYMLKDVEDL 635
H+HPSS L + + W+++HE+++TTK Y R V ++ EW+ ++ P H + D+ +
Sbjct: 651 HIHPSSALHEQETKLEWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSV 710
Query: 636 -RKKMPRVAGRPW 647
R+++ A R W
Sbjct: 711 ARREVREDARRRW 723
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/631 (41%), Positives = 404/631 (64%), Gaps = 22/631 (3%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY-TKHGKVGCT 60
L ++K LPI YR Q+L AV++NQ+ +++G TG GKTTQIPQ+L+EAG+ +++G +GCT
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCT 77
Query: 61 QPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKL 120
QPRR+ A SV+ RVS E+ G GYSI+F+ SEKT +KYMTDG++L E+ DP L
Sbjct: 78 QPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLL 137
Query: 121 ESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI-- 178
E YS++++DE HERTLSTD+LLG+ K ++ R+D +L++SSA++DA K S +F +
Sbjct: 138 ERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCT 197
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILK 238
+ + G+ +PVE + + P NY+D+AI T + I++T GDILVFL+G++EIE + ++
Sbjct: 198 MSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIE 257
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+ + L+ P++A L + Q ++F RKV+ +TNIAETS+TIDGI YV
Sbjct: 258 DSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYV 317
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
VDSG++K + YNP T L+ PISK+SA+QR+GR+GRT GK FRLYT +Y M++
Sbjct: 318 VDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSL-MKE 376
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELT 418
+I +++ ++L LK LG+ ++L F F PP L ALE LY LG L++ G LT
Sbjct: 377 EFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLT 436
Query: 419 K-VGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRP----KNKKFLA 473
+G Q++ LD +SK ++ S++F C++EI++IA++L+ G VFY P KN F+A
Sbjct: 437 DPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAG-EVFYNPTSSSKNDAFVA 495
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTCLVE 533
++ + + GD I LNV+ S+ N QWC N++ +++++ A DIR L +
Sbjct: 496 HSS----FFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLN 551
Query: 534 RVGI----ELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQ 589
+ I L SS C+ + K ++ GF+ + A LQ +GSY T+ Q V + SS L +
Sbjct: 552 KFSIPTAQRLPSSDCS--KILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHE 608
Query: 590 VPKRWVIYHELVLT-TKEYMRQVTELKPEWL 619
W++Y V + T+ +++ +++++ WL
Sbjct: 609 KKTPWIMYSSAVESETQIFVKNISKIESFWL 639
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/650 (40%), Positives = 402/650 (61%), Gaps = 33/650 (5%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGY--TKHGKVGC 59
L K R+TLP+Y ++ +++ ++ N V V++GETGSGK+TQIPQ++ E Y KHG +
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAV 133
Query: 60 TQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPK 119
TQPRRVAAI++A RV++E G KLG +VGYS+RF++ T+ +T LKY+TDGM+LRE++ +
Sbjct: 134 TQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSD 193
Query: 120 LESYSVLMVDEAHERTLSTDILLGIFKDLVR-LRSDLKLLISSATLDAEKFSAYFNFAPI 178
L YSV+++DEAHERT+ TD++LG K L++ R DL++++ SATL AEKFS +FN API
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPI 253
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILK 238
L V GR++ V+ +Y KAP + +DA I ++I+ + GDIL FL GQEEI+ I+
Sbjct: 254 LFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIM- 312
Query: 239 ERIRKLGTK---IGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGI 295
E+I K + + ++ P+YA LP Q+ +F P RKVV +TNIAETS+TI G+
Sbjct: 313 EKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGV 372
Query: 296 KYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQED 355
K+VVDSG K+K + + G+ +LL PIS+ASAMQR+GR+GR GK FRLY + Y +
Sbjct: 373 KFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVK- 431
Query: 356 MEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVG 415
+ + PEI R+++ + +L+LK G+DDLLN+ + ++P +E + L+ LY LGAL+ G
Sbjct: 432 LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRG 491
Query: 416 ELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADN 475
++TK G+QMA PL P LS +++ + + C +++I I + LSV N + ++ +
Sbjct: 492 KITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNE 551
Query: 476 ARMNFYQGDA--GDHIALLNVYNSW-----KENDYSKQ---WCYDNFIQFRSMKHARDIR 525
R++ GD I L +++ + K D S + WC I R K+ +R
Sbjct: 552 RRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVR 611
Query: 526 DQLTCLVERVGIELTSSLCN----------LEAMKKAIISGFLLHTARLQKNGSYWTVKH 575
DQL +R+ ++ + + K ++GF+ +TA + SY TV
Sbjct: 612 DQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVST 671
Query: 576 PQKVHVHPSSGL---AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEI 622
+ + +HPSS L P ++Y E V TTK Y R V+ ++ WL E+
Sbjct: 672 GEPISIHPSSMLFMNKSCP--GIMYTEYVFTTKGYARNVSRIELSWLQEV 719
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/636 (38%), Positives = 379/636 (59%), Gaps = 29/636 (4%)
Query: 7 KTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVA 66
++LP+ + ++ + + E+QV+V+ GETGSGKTTQ+P+ E G+ G +G TQPRR+A
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIA 140
Query: 67 AISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVL 126
A SVAAR++ E+ +LG VGY +RF D S+ T +K MTDG++L E+ +D L YS L
Sbjct: 141 ARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL 200
Query: 127 MVDEAHERTLSTDILLGIFKDLV-RLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRR 185
++DEAHER+L+ D +LG K L+ R R DLKL+I+SAT+D E+FS +FN API+ V GR
Sbjct: 201 IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRT 260
Query: 186 YPVEIHYTKAPESNYID--AAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIRK 243
YPVE+ Y E + D I+ ++ + GDIL+F+ G+ EI E L+++
Sbjct: 261 YPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFMNGEREIRDTAEALQKQ--- 317
Query: 244 LGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSGY 303
+ + P++A L + Q KIF P+ G ++VLATN+AETSLT+ IKYV+D G
Sbjct: 318 ---NLKHTEILPLFARLSAQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDPGT 372
Query: 304 SKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVPE 363
+++ Y+ +T ++ L + PIS+ASA QR GR GR G C RLY+ + E T PE
Sbjct: 373 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPE-FTDPE 431
Query: 364 IQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQV----GE--- 416
I RTNLA+VIL + LG+DD+ F F+D+P + ++ ++LL LGA V GE
Sbjct: 432 ILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRL 491
Query: 417 LTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNA 476
LT+VGRQ+A+ P+DP L+KMI+++ F C E++ I + LS+ + RP+ K+ +D
Sbjct: 492 LTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPR-ERPQEKQQASDEK 550
Query: 477 RMNFYQGDAGDHIALLNVYNSWKE-------NDYSKQWCYDNFIQFRSMKHARDIRDQLT 529
F + D +A LN++ +E N + +Q C +F+ + ++ +DI Q+
Sbjct: 551 HRRFADKKS-DFLAFLNLWRYLQEQQKESSKNQFRRQ-CQKDFLNYLRIREWQDIYHQIR 608
Query: 530 CLVERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQ 589
V + + + S + + A++SG L H + + + P+S L +
Sbjct: 609 LTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFK 668
Query: 590 VPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+WV+ ELV T+K + R V E++PEW+ +A H
Sbjct: 669 KQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEH 704
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 376/634 (59%), Gaps = 27/634 (4%)
Query: 8 TLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVAA 67
LP+ ++ +L A++++QVV++ GETGSGKTTQ+P+ E G G +G TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 68 ISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
+VA R++ E+ + G +GY +RF D S+ T++K MTDG++L E+ D L Y ++
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYP 187
+DEAHER+L+ D LLG K+L+ R DLK++I+SAT+D E+FS +FN API+ V GR YP
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 188 VEIHYTK-APESNYID----AAIVTTLEIHATQASGDILVFLTGQEEIETVEEILKERIR 242
VE+ Y E++ + AI ++ + ++ GDIL+F++G+ EI + L
Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALN---- 311
Query: 243 KLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYVVDSG 302
KL + E++ P+YA L Q ++F R++VLATN+AETSLT+ GIKYV+D G
Sbjct: 312 KLNLRHTEIL--PLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPG 367
Query: 303 YSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMEDNTVP 362
+++ Y+ +T ++ L + PIS+ASA QR GR GR G C RLY+ + + E T P
Sbjct: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE-FTDP 426
Query: 363 EIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALN-----QVGEL 417
EI RTNLA+VIL + LG+ D+ F F+++P + ++ + LL LGA+ +L
Sbjct: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486
Query: 418 TKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFLADNAR 477
T +GRQ+++ P+DP L++M++ + K C E + I + LS+ + RP +K+ +D
Sbjct: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQASDEKH 545
Query: 478 MNFYQGDAGDHIALLNVYNSWKENDYS------KQWCYDNFIQFRSMKHARDIRDQLTCL 531
F+ ++ D +A +N++N E + ++ C +++ + ++ +DI QL +
Sbjct: 546 RRFHDKES-DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604
Query: 532 VERVGIELTSSLCNLEAMKKAIISGFLLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVP 591
V+ +GI + S + A+++G L H + +T + + P SGL + P
Sbjct: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664
Query: 592 KRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPH 625
+WV+ ELV T++ + R + PEW+ +A H
Sbjct: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 378/651 (58%), Gaps = 30/651 (4%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + ++ +NQVVV+ G++ GK++Q+PQ+ E + + +HG V
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 114
Query: 59 CTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ + A+ +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 115 CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HER+L+TD+LLG+ KD++ R +LKL+++ + L K S+Y+ P+
Sbjct: 175 FLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPV 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILK 238
+ V ++PVE+ Y + + ++ I EIH + GD++VFL +++IE E++
Sbjct: 235 IEV-RNKHPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVC 293
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDG-------ARKVVLATNIAETSLT 291
+ L +G+L+V P+Y P E + +F P + R+VVL T+ E+ +
Sbjct: 294 QEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIW 349
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+K+V+D G + + YNP+ SL++ PIS++ A R G + GK F LYT
Sbjct: 350 SHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEF 409
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGAL 411
+DM E+Q NL +++L +K + I L DF++ P E L +ALE L L AL
Sbjct: 410 ASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ + + P +
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 529
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE------NDYS-KQWCYDNFIQFRSMKHARDI 524
A F + GDH L+NVYN++++ N++ + WC+D F+ +++ A I
Sbjct: 530 AAVTCWKTFLHPE-GDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVI 588
Query: 525 RDQLTCLVERVGIELT----SSLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +++R+ + S N +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 589 RAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 648
Query: 580 HVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+HP S + K WV++H+ ++ Y+R + + PE ++ P YY
Sbjct: 649 QLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYYF 699
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/651 (35%), Positives = 374/651 (57%), Gaps = 31/651 (4%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+TLPI+ + L + NQ+VV+ SGK++QIPQ+ E AG+ +HG V
Sbjct: 57 LLKERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVV 116
Query: 59 CTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ + A+ +A RV+ EM V +GHEVGY + FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 117 CTQAHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNP 176
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ +ER +STD+LL K + R +LK++I + + +Y+ AP+
Sbjct: 177 LLSSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITCPSLSGTLVSYYGNAPL 236
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILK 238
+ + VE YT + +Y +A+ EIH T+ GDI+VFL +EEI+ E +K
Sbjct: 237 VEAEN-THSVESVYTTSLPRDYFHSALRLLFEIHHTKEKGDIVVFLACEEEIKRAYEHIK 295
Query: 239 ERIRKLGTKIGELIVCPVYAN------LPTELQAKIFVPTPDGARKVVLATNIAETSLTI 292
+ + ++GEL+ +Y + +P E ++ + + RKVVL T++ E+ + +
Sbjct: 296 QEALHMNPELGELMPIALYPHQSISDYIPYE---ELDDNSKNPKRKVVLTTSLGESLIWM 352
Query: 293 DGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSY 352
I +V+D G K K YN + ESL+ PISK A R + GK F LY +
Sbjct: 353 KNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYP-EDF 411
Query: 353 QEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALN 412
+M+ +++ NL +++L LK + I L + DF++ P E L +ALE L L AL+
Sbjct: 412 AHEMKPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYLAALD 471
Query: 413 QVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKFL 472
G L++ G M+EFPLDP LSK I+A+ +F C +E++T+AA+++ N P K L
Sbjct: 472 NDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKEL 531
Query: 473 ADNARMNFYQGDAGDHIALLNVYNSW---KENDYSK----QWCYDNFIQFRSMKHARDIR 525
+ F+ + GDH L+N+YN + K N+ S+ +WC ++ + F +++ AR IR
Sbjct: 532 DLIGKGKFFHPE-GDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALEMARAIR 590
Query: 526 DQLTCLVERVGIELT----SSLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKVH 580
++L ++ R+ + LT S N+ +KK+++SG+ + AR + G+Y + H Q
Sbjct: 591 NELLDIMRRIELPLTGPAFGSDENVTNIKKSLLSGYFMQIARDVDGLGNYIMLTHKQVGQ 650
Query: 581 VHPSSGL---AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+HP SG A+VP+ WV++HE ++ + +R V+E+ P E P YY
Sbjct: 651 LHPDSGFCNSAKVPE-WVLFHEFSVSERSCIRIVSEISPNLFMEFVPPYYF 700
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/552 (38%), Positives = 323/552 (58%), Gaps = 26/552 (4%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ V CTQ
Sbjct: 157 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQ 213
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRR+A IS+A RV E + G +VGY IRFE S T + ++T G++LR++ +P L
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF+ AP+++V
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 182 PGRRYPVEIHYTK------APESNYIDA-AIVTTLEI----HATQASGDILVFLTGQEEI 230
PGR +P+ + Y A +S +D + LE + + GD+LVFL+G EI
Sbjct: 334 PGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 393
Query: 231 ETVEEILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
TV + + + +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 394 TTVLDAAQ----AYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSV 449
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ ++ L + IS+ASA QR GR+GRTGPG C+RLY +
Sbjct: 450 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAES 509
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGA 410
Y + VPEI+R L ++L +K++ + D F F++ PP + A+ L GA
Sbjct: 510 DY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGA 568
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F + ++TIAA LSV S F R
Sbjct: 569 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV-QSPFTRSAQSN 627
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
AR + D GD L NV+N+W + + S++WC ++ + ++R
Sbjct: 628 LDCATARRPL-ESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLR 686
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 687 RQFKELLEDHGL 698
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 246/741 (33%), Positives = 388/741 (52%), Gaps = 119/741 (16%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYT-----KHGK 56
+Q+ R LPI ++++ + N VV+I G TGSGKTTQ+PQ+L EAG++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 57 VGCTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
+ TQPRRVAA+S+A RVS E+ +V Y IRF+ + T +K+MTDG++LRE+ S
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSD----------LKLLISSATLDA 166
D L +YS ++VDEAHER+++TDILLG+ +VRLR + LKL+I SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 167 EKFSA---YFNF-APILRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILV 222
FS F+ PI+++ R+YPV IH+ + + +Y+ A IH +G ILV
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 223 FLTGQEEIETVEEILKERI----------------RKLGTKIGE---------------- 250
FLTGQ+E+E + ++L++R RK + E
Sbjct: 630 FLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSS 689
Query: 251 ------------LIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
+ V P+Y+ L TE Q K+F +P+G R ++ATN+AETS+TI I+YV
Sbjct: 690 SSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYV 749
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
VD G +K + YN KT ++ V ISKA+A QRAGR+GRTGPG C+RLY+ +
Sbjct: 750 VDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPL 809
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGALNQVGELT 418
+++PEI RT + +++L +KN+ ID++ NF F SP + L K+L+LL LGA++ G LT
Sbjct: 810 HSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLT 869
Query: 419 KVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVG------NSVFYRPKNKKFL 472
K+G QM+ FPL P SKM++ + C +I + + LS+ S+ Y +K
Sbjct: 870 KLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSR 929
Query: 473 AD------------------------NARMNFYQGDA-GDHIALLNVYNSWKENDYSKQW 507
++ NA F D ++LL+ ++ +++
Sbjct: 930 SEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKF 989
Query: 508 CYDNFIQFRSMKHARDIRDQLTCLVERVGIELTSSLCNLE----------AMKKAIISGF 557
C +N+++ ++++ ++R Q+ L++R + + L+ A+++ I S +
Sbjct: 990 CKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIKALRQFIASAY 1049
Query: 558 LLHTARLQKNGSYWTVKHPQKVHVHPSSGLAQVPKR-------WVIYHEL--VLTTKEYM 608
+ A K + P V + VP R +V+Y L + + YM
Sbjct: 1050 IDQVALYDKEKRGYVTLFPSGSEV-----VQFVPDRTYNIDSEYVVYLSLHESRSGRVYM 1104
Query: 609 RQVTELKPEWLFEIAPHYYML 629
+TE+ PE L +A + +L
Sbjct: 1105 SPLTEISPEHLARLAKNTTLL 1125
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 376/651 (57%), Gaps = 31/651 (4%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHE---AGYTKHGKVG 58
L KER+ LPI+ + + + +NQ+V++ G+ GK+ Q+PQ+ E + + +HG V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI 114
Query: 59 CTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDP 118
CTQ + + +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD M+ REM+S+P
Sbjct: 115 CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNP 174
Query: 119 KLESYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPI 178
L SY V+++D+ HER+++TD+LLG+ KD++ R +LKL+I+S+ K ++Y+ P+
Sbjct: 175 FLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPV 234
Query: 179 LRVPGRRYPVEIHYTKAPESNYIDAAIVTTLEIHATQASGDILVFLTGQEEIETVEEILK 238
+ V ++PVE+ Y + + ++ + EIH + GDI+VFL +++IE V E +
Sbjct: 235 IEV-KNKHPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVY 293
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDG-------ARKVVLATNIAETSLT 291
+ L +GEL+V P+Y P E + +F P + R+VVL T+ E +
Sbjct: 294 QG-SNLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIW 348
Query: 292 IDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINS 351
+ +++V+D G + K YNP+ SL++ PIS++ A R G + GK F LYT
Sbjct: 349 SNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEF 408
Query: 352 YQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGAL 411
+DM E+Q NL +++L +K + I L + DF++ P E L +ALE L L AL
Sbjct: 409 ASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAAL 468
Query: 412 NQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKKF 471
+ G L++ G M+EFPLDP LSK I+AS +F C +E++TIAA+++ N + P +
Sbjct: 469 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEE 528
Query: 472 LADNARMNFYQGDAGDHIALLNVYNSWKE------NDYS-KQWCYDNFIQFRSMKHARDI 524
A F + GDH L+++Y ++++ ++Y ++WC D F+ +++ A I
Sbjct: 529 AALTCWKTFLHPE-GDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVI 587
Query: 525 RDQLTCLVERVGIELT----SSLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKV 579
R +L +++R+ + S N +KKA++SG+ + AR + +G+Y + H Q
Sbjct: 588 RAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 647
Query: 580 HVHPSSGLAQVPK--RWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
+HP SG + K WV++H+ ++ Y+R +E+ PE ++ P YY
Sbjct: 648 QLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYYF 698
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 321/552 (58%), Gaps = 26/552 (4%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQ 61
LQ+ER LPI Y ++L+ ++E+QVVV+ G+TG GK+TQ+PQYL AG++ V CTQ
Sbjct: 155 LQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQ 211
Query: 62 PRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLE 121
PRR+A IS+A RV E + G +VGY IRFE S T + ++T G++LR++ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 122 SYSVLMVDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRV 181
Y VL+VDE HER L D LLG+ + L+ R DLK+++ SAT++ FS+YF+ AP+++V
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 182 PGRRYPVEIHYTK------APESNYIDA-AIVTTLEI----HATQASGDILVFLTGQEEI 230
PGR +P+ + Y +S +D + LE + + GD+LVFL+G EI
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEI 391
Query: 231 ETVEEILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
V E + + +V P+++ L Q K+F P G RK +L+TNIAETS+
Sbjct: 392 SAVLEAAQ----TYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
TIDGI++VVDSG K Y+P+ ++ L + IS+ASA QR GR+GRTGPG CFRLY +
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGA 410
Y + VPEI+R L +++L +K++ + D F F++ PP L A+ L GA
Sbjct: 508 DY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGA 566
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
L+ LT +G +A+ P+D ++ KM++ F ++TIAA LSV S F R
Sbjct: 567 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV-QSPFTRSAQSS 625
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSW-----KENDYSKQWCYDNFIQFRSMKHARDIR 525
AR + D GD L NV+N+W + + S++WC I+ + ++R
Sbjct: 626 PECAAARRPL-ESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLR 684
Query: 526 DQLTCLVERVGI 537
Q L+E G+
Sbjct: 685 RQFKELLEDHGL 696
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 237/650 (36%), Positives = 351/650 (54%), Gaps = 50/650 (7%)
Query: 9 LPIYHYREQVLRAVQENQVVVIVGETGSGKTTQIPQYLHEAGYTKHGKVGCTQPRRVAAI 68
LPIY YR Q+L+ + Q++V++GETGSGK+TQ+ Q+L ++G + CTQPR++AA+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 69 SVAARVSREM-GVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLSDPKLESYSVLM 127
++ RV E G + V + F + + YMTD +L+ + D L S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 128 VDEAHERTLSTDILLGIFKDLVRLRSDLKLLISSATLDAEKFSAYFNFAPILRVPGRRYP 187
+DEAHER+L+TD+LL + + L+ R DL+L+I SAT DA + S Y IL V GR +P
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 188 VEIHYT-KAPESNYIDAAIVT--------TLEIHATQASGDILVFLTGQEEIETVEEILK 238
VEI Y+ E N + I + +EIH T+ G IL FLT Q E+E E
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE--- 539
Query: 239 ERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSLTIDGIKYV 298
R + I P++ L E Q +F P G RKV+ ATNIAETSLTI G+KYV
Sbjct: 540 ---RFVAPSA---IALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYV 592
Query: 299 VDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTINSYQEDMED 358
+DSG K Y P+TGM L V +S++SA QRAGR+GRT PG+C+RLY+ + + M
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-DSMNL 651
Query: 359 NTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGAL---NQVG 415
N PEI+R +L +L + LGID++ F+F+D+P E + A++ L LGA+ N V
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVL 711
Query: 416 ELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKN--KKFLA 473
ELT+ G + + L+P L K+I+ + + E I +AA+++ +S+F R N K A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 474 DNARMNFYQGDAGDHIALLNVYNSWKE--NDYSKQWCYDNFIQFRSMKHARDIRDQLTCL 531
D ++ F D GD LL+VY W D +WC++N + +SM+ D +L
Sbjct: 772 DRLKVQFCN-DNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEIC 830
Query: 532 VERVGIELT------------SSLCNLEAMKKAIISGFLLHTARLQ--KNGSYWTVKHPQ 577
+ER ELT + + +K I++ + A Y Q
Sbjct: 831 IER---ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQ 887
Query: 578 KVHVHPSSGL---AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAP 624
+V +HPS L Q P WV++ EL+ +Y+ VT E L+ + P
Sbjct: 888 QVQLHPSCSLLAFGQKPS-WVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/649 (32%), Positives = 355/649 (54%), Gaps = 29/649 (4%)
Query: 2 LQKERKTLPIYHYREQVLRAVQENQ--VVVIVGETGSGKTTQIPQYLHEAGYTKH---GK 56
L ++R+ LPI+ R L ++ + VV++ G+ GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 57 VGCTQPRRVAAISVAARVSREMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMVLREMLS 116
V TQP +AA+S+A+RV+ EM + LGHE+GYSI EDCT T+L++ D + L+E+ S
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 117 DPKLESYSVLMVDEAHERTLSTDILLGIFKD--LVRLRSDLKLLISSATLDAEKFSAYFN 174
++SVL++DEA ER++++D+L G+ +D L L D ++++ + KF A++
Sbjct: 155 TRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWG 214
Query: 175 FAPILRVPGRRYP---VEIHYTKAPESNYIDAAIVTTLEI-HATQASGDILVFLTGQEEI 230
+PI+RVP R P + Y ++ ++AA LE+ +A GD+LV+L +EEI
Sbjct: 215 NSPIVRVP--REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEI 272
Query: 231 ETVEEILKERIRKLGTKIGELIVCPVYANLPTELQAKIFVPTPDGARKVVLATNIAETSL 290
E L + L V P++ +Q ++ T RK+V+ +A+ S
Sbjct: 273 SLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSF 331
Query: 291 TIDGIKYVVDSGYSKMKWYNPKTGMESLLVYPISKASAMQRAGRSGRTGPGKCFRLYTIN 350
++ I++V+DSG YNP+ ES ++ PISK A R R+ PG C RLY+ +
Sbjct: 332 SLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKS 391
Query: 351 SYQEDMEDNTVPEIQRTNLANVILILKNLGIDDLLNFDFLDSPPQELLRKALELLYALGA 410
+ + + P++ NL++++L+L I + FLD P E L +ALE L L A
Sbjct: 392 TLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAA 451
Query: 411 LNQVGELTKVGRQMAEFPLDPMLSKMIVASDKFKCSNEIITIAALLSVGNSVFYRPKNKK 470
LN GEL+ +G ++EFPL P L+K ++AS +F C +E++T+AA+L+ F RP
Sbjct: 452 LNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPPLSA 510
Query: 471 FLADNARMNFYQGDAGDHIALLNVYNSWKENDYSKQWCYDNFIQFRSMKHARDIRDQLTC 530
+ A + GDH +L+ VY ++ ++ + WC + + S+ AR +R +L
Sbjct: 511 --GEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVE 568
Query: 531 LVERVGIELT----SSLCNLEAMKKAIISGFLLHTAR-LQKNGSYWTVKHPQKVHVHPSS 585
L++R+ + L+ S N ++KA++SG+ L AR G+Y + H + P
Sbjct: 569 LMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYC 628
Query: 586 GL------AQVPKRWVIYHELVLTTKEYMRQVTELKPEWLFEIAPHYYM 628
AQ P WV+YH ++ + V+E++PE L E+AP Y++
Sbjct: 629 SYRNRRTPAQ-PPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYFL 676
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,760,791
Number of Sequences: 539616
Number of extensions: 9687175
Number of successful extensions: 34600
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 33696
Number of HSP's gapped (non-prelim): 417
length of query: 650
length of database: 191,569,459
effective HSP length: 124
effective length of query: 526
effective length of database: 124,657,075
effective search space: 65569621450
effective search space used: 65569621450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)