Query 041902
Match_columns 470
No_of_seqs 112 out of 1440
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 20:31:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.4E-66 4.9E-71 525.5 39.1 434 5-467 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 9.5E-61 3.2E-65 491.7 37.4 444 8-470 6-481 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 4.2E-60 1.4E-64 482.6 38.3 434 8-470 5-454 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 3.9E-59 1.3E-63 478.4 40.2 437 8-467 4-468 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 3.2E-57 1.1E-61 462.4 36.9 430 9-467 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 6.5E-46 2.2E-50 376.1 29.8 397 5-463 7-417 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.9E-44 6.7E-49 362.1 27.3 362 7-466 19-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8.8E-43 3E-47 352.1 27.5 378 11-468 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 4.8E-42 1.6E-46 346.8 23.0 362 11-447 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 6.8E-41 2.3E-45 338.1 28.7 379 5-464 15-410 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 5.8E-41 2E-45 337.5 22.7 349 11-446 1-366 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 9.4E-40 3.2E-44 328.0 29.8 375 10-465 4-396 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-39 3.7E-44 332.1 27.3 374 9-466 19-433 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.6E-38 5.3E-43 322.4 30.0 375 8-463 5-395 (430)
15 2p6p_A Glycosyl transferase; X 100.0 7E-38 2.4E-42 312.8 30.9 355 11-467 1-378 (384)
16 4fzr_A SSFS6; structural genom 100.0 2.6E-37 8.9E-42 310.3 20.7 349 4-447 9-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.1E-36 7E-41 303.8 20.6 352 9-467 19-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.8E-34 6.1E-39 288.8 25.5 360 10-467 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.5E-33 1.5E-37 280.4 28.2 362 5-464 15-405 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 4.2E-28 1.5E-32 240.1 25.5 339 11-466 3-354 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.2E-26 7.5E-31 202.6 15.5 162 265-446 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.9E-19 6.4E-24 177.6 26.9 317 11-443 7-335 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.3E-15 4.5E-20 143.6 19.1 263 11-409 1-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 3.5E-15 1.2E-19 135.1 7.7 132 276-427 25-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.4 2.3E-11 7.9E-16 120.1 23.1 136 278-439 197-342 (376)
26 3okp_A GDP-mannose-dependent a 99.4 6.8E-10 2.3E-14 109.8 29.5 347 7-467 1-377 (394)
27 3c48_A Predicted glycosyltrans 99.3 2.5E-09 8.4E-14 107.6 32.9 350 7-436 17-396 (438)
28 3ot5_A UDP-N-acetylglucosamine 99.3 5.5E-11 1.9E-15 118.6 20.3 108 340-466 282-392 (403)
29 1vgv_A UDP-N-acetylglucosamine 99.3 2E-10 6.8E-15 113.5 22.2 135 278-437 204-348 (384)
30 3beo_A UDP-N-acetylglucosamine 99.3 1.6E-09 5.6E-14 106.5 26.0 327 6-437 4-348 (375)
31 2gek_A Phosphatidylinositol ma 99.3 4.6E-09 1.6E-13 104.3 29.5 319 6-437 16-355 (406)
32 3dzc_A UDP-N-acetylglucosamine 99.3 4.2E-10 1.4E-14 112.0 21.3 138 277-439 228-375 (396)
33 3fro_A GLGA glycogen synthase; 99.2 5.8E-09 2E-13 104.6 29.3 347 9-429 1-394 (439)
34 2iw1_A Lipopolysaccharide core 99.2 1.4E-08 4.9E-13 99.5 30.1 163 280-465 196-370 (374)
35 2r60_A Glycosyl transferase, g 99.2 3.1E-09 1.1E-13 109.0 26.1 86 338-436 333-429 (499)
36 2jjm_A Glycosyl transferase, g 99.1 1.5E-07 5.2E-12 93.1 28.9 320 11-437 16-356 (394)
37 2iuy_A Avigt4, glycosyltransfe 99.0 1.1E-08 3.7E-13 99.4 17.4 126 282-429 164-307 (342)
38 4hwg_A UDP-N-acetylglucosamine 99.0 6.2E-09 2.1E-13 102.9 15.6 319 10-433 9-344 (385)
39 2x6q_A Trehalose-synthase TRET 98.9 2.5E-06 8.5E-11 84.9 29.5 110 339-466 292-411 (416)
40 3s28_A Sucrose synthase 1; gly 98.7 9.4E-06 3.2E-10 87.1 27.2 87 338-437 638-740 (816)
41 2vsy_A XCC0866; transferase, g 98.5 5.1E-05 1.7E-09 78.7 27.8 87 340-438 434-529 (568)
42 1rzu_A Glycogen synthase 1; gl 98.5 7.9E-05 2.7E-09 75.6 28.6 133 282-437 293-449 (485)
43 2f9f_A First mannosyl transfer 98.4 2.4E-06 8.3E-11 74.4 12.2 138 282-442 25-174 (177)
44 2qzs_A Glycogen synthase; glyc 98.4 0.00029 1E-08 71.3 29.6 88 337-437 344-450 (485)
45 3oy2_A Glycosyltransferase B73 98.4 8.2E-05 2.8E-09 73.7 24.0 105 342-464 256-385 (413)
46 2hy7_A Glucuronosyltransferase 98.3 7.2E-05 2.5E-09 74.3 21.6 77 338-433 263-354 (406)
47 2xci_A KDO-transferase, 3-deox 98.1 0.00099 3.4E-08 65.2 24.6 93 341-444 261-362 (374)
48 3tov_A Glycosyl transferase fa 97.7 0.0032 1.1E-07 60.9 19.4 106 8-138 6-115 (349)
49 1psw_A ADP-heptose LPS heptosy 97.6 0.014 4.8E-07 56.0 22.4 103 11-138 1-106 (348)
50 3qhp_A Type 1 capsular polysac 97.5 0.0012 4E-08 56.2 12.0 135 280-438 2-147 (166)
51 3q3e_A HMW1C-like glycosyltran 97.4 0.0025 8.4E-08 65.6 15.5 146 279-439 440-596 (631)
52 4gyw_A UDP-N-acetylglucosamine 97.2 0.011 3.9E-07 62.8 17.6 146 278-438 521-675 (723)
53 2bfw_A GLGA glycogen synthase; 97.2 0.0075 2.6E-07 52.7 13.8 76 341-429 96-179 (200)
54 2gt1_A Lipopolysaccharide hept 96.6 0.086 3E-06 50.0 17.2 43 11-53 1-45 (326)
55 3rhz_A GTF3, nucleotide sugar 96.5 0.0042 1.5E-07 59.7 7.0 108 341-465 215-336 (339)
56 3ty2_A 5'-nucleotidase SURE; s 94.6 0.11 3.9E-06 47.1 8.4 47 5-53 6-52 (261)
57 2x0d_A WSAF; GT4 family, trans 94.3 0.052 1.8E-06 53.6 6.2 85 339-437 294-385 (413)
58 3vue_A GBSS-I, granule-bound s 93.1 0.05 1.7E-06 55.7 3.5 137 277-429 325-476 (536)
59 3vue_A GBSS-I, granule-bound s 92.3 1.1 3.7E-05 45.8 12.2 42 4-47 3-52 (536)
60 2phj_A 5'-nucleotidase SURE; S 89.7 2.5 8.5E-05 38.1 10.4 113 11-141 2-127 (251)
61 1g5t_A COB(I)alamin adenosyltr 88.8 4.7 0.00016 34.9 11.3 96 11-122 29-130 (196)
62 3zqu_A Probable aromatic acid 87.7 0.76 2.6E-05 40.4 5.6 46 7-53 1-46 (209)
63 1j9j_A Stationary phase surviV 87.6 3.1 0.00011 37.4 9.7 114 11-141 1-128 (247)
64 1uqt_A Alpha, alpha-trehalose- 87.0 10 0.00035 37.8 14.3 106 342-468 333-453 (482)
65 1l5x_A SurviVal protein E; str 86.8 3.3 0.00011 38.0 9.5 113 11-142 1-128 (280)
66 3t5t_A Putative glycosyltransf 86.7 7.6 0.00026 38.8 12.9 107 341-468 353-472 (496)
67 2x0d_A WSAF; GT4 family, trans 85.6 0.45 1.5E-05 46.8 3.3 42 7-48 43-89 (413)
68 2e6c_A 5'-nucleotidase SURE; S 84.9 5.6 0.00019 35.7 9.9 58 11-70 1-58 (244)
69 2v4n_A Multifunctional protein 84.3 7 0.00024 35.3 10.3 42 10-53 1-42 (254)
70 1sbz_A Probable aromatic acid 82.9 1.4 4.9E-05 38.2 5.0 42 11-53 1-43 (197)
71 2iz6_A Molybdenum cofactor car 82.7 13 0.00044 31.5 10.8 134 267-429 35-173 (176)
72 2bw0_A 10-FTHFDH, 10-formyltet 80.2 4.7 0.00016 38.1 7.9 107 4-143 16-131 (329)
73 1kjn_A MTH0777; hypotethical p 79.9 3.9 0.00013 33.3 6.0 47 7-53 3-51 (157)
74 3qjg_A Epidermin biosynthesis 79.6 2.6 8.8E-05 35.8 5.3 42 11-53 6-47 (175)
75 3q0i_A Methionyl-tRNA formyltr 79.3 8.9 0.0003 35.9 9.4 37 6-47 3-39 (318)
76 1mvl_A PPC decarboxylase athal 78.6 2.8 9.6E-05 36.7 5.4 43 9-53 18-60 (209)
77 4dzz_A Plasmid partitioning pr 77.8 6.8 0.00023 33.5 7.8 37 11-47 1-39 (206)
78 2wqk_A 5'-nucleotidase SURE; S 77.3 13 0.00045 33.4 9.6 40 11-53 2-42 (251)
79 3lqk_A Dipicolinate synthase s 76.4 2.4 8.4E-05 36.9 4.3 44 9-53 6-50 (201)
80 2ejb_A Probable aromatic acid 76.1 4.2 0.00014 35.0 5.7 42 11-53 2-43 (189)
81 1ccw_A Protein (glutamate muta 76.0 4.2 0.00014 32.9 5.4 38 10-47 3-40 (137)
82 2q5c_A NTRC family transcripti 75.9 29 0.00098 29.8 11.1 112 22-145 36-172 (196)
83 3iqw_A Tail-anchored protein t 75.3 4.6 0.00016 38.2 6.3 41 8-48 13-54 (334)
84 3qxc_A Dethiobiotin synthetase 75.1 12 0.0004 33.5 8.7 36 9-44 19-56 (242)
85 3fgn_A Dethiobiotin synthetase 72.9 10 0.00034 34.2 7.7 115 9-142 24-166 (251)
86 2yxb_A Coenzyme B12-dependent 72.2 4 0.00014 34.1 4.5 107 8-138 16-126 (161)
87 3nb0_A Glycogen [starch] synth 70.8 25 0.00087 36.6 10.8 81 340-428 490-592 (725)
88 1g63_A Epidermin modifying enz 70.4 4.7 0.00016 34.4 4.6 42 11-53 3-44 (181)
89 3mcu_A Dipicolinate synthase, 69.3 4.9 0.00017 35.1 4.5 44 9-53 4-48 (207)
90 3auf_A Glycinamide ribonucleot 68.6 44 0.0015 29.4 10.8 106 7-142 19-132 (229)
91 1p3y_1 MRSD protein; flavoprot 68.3 3.8 0.00013 35.4 3.6 44 9-53 7-50 (194)
92 3zzm_A Bifunctional purine bio 67.7 8.5 0.00029 38.2 6.2 58 8-75 7-66 (523)
93 1qzu_A Hypothetical protein MD 67.4 4.7 0.00016 35.2 4.0 46 9-56 18-64 (206)
94 4dim_A Phosphoribosylglycinami 66.6 16 0.00056 35.1 8.3 37 6-47 3-39 (403)
95 1fmt_A Methionyl-tRNA FMet for 64.6 23 0.00078 33.0 8.4 34 9-47 2-35 (314)
96 1y80_A Predicted cobalamin bin 64.1 9.5 0.00032 33.2 5.4 41 8-48 86-126 (210)
97 2i2x_B MTAC, methyltransferase 63.5 11 0.00037 34.1 5.8 40 8-47 121-160 (258)
98 4b4o_A Epimerase family protei 62.8 7.4 0.00025 35.7 4.8 32 11-46 1-32 (298)
99 3mc3_A DSRE/DSRF-like family p 62.4 16 0.00055 29.2 6.1 45 9-53 14-61 (134)
100 3dfz_A SIRC, precorrin-2 dehyd 62.2 33 0.0011 30.1 8.6 148 272-447 26-185 (223)
101 2a33_A Hypothetical protein; s 59.5 27 0.00093 30.5 7.5 103 267-386 35-147 (215)
102 3l7i_A Teichoic acid biosynthe 58.7 16 0.00054 38.6 6.9 111 346-467 605-719 (729)
103 2vo1_A CTP synthase 1; pyrimid 58.3 12 0.00041 33.8 4.9 47 5-51 17-66 (295)
104 3vot_A L-amino acid ligase, BL 58.1 33 0.0011 33.2 8.8 35 8-47 3-37 (425)
105 3qjg_A Epidermin biosynthesis 57.6 43 0.0015 28.2 8.2 112 280-404 7-142 (175)
106 3ezx_A MMCP 1, monomethylamine 57.5 14 0.00049 32.3 5.4 41 7-47 89-129 (215)
107 1ydh_A AT5G11950; structural g 56.3 29 0.001 30.3 7.1 102 267-386 31-143 (216)
108 3u7q_B Nitrogenase molybdenum- 54.6 74 0.0025 31.9 10.7 33 10-47 364-396 (523)
109 3dm5_A SRP54, signal recogniti 54.5 37 0.0013 33.3 8.3 41 10-50 100-140 (443)
110 3igf_A ALL4481 protein; two-do 54.1 6.4 0.00022 37.9 2.7 36 11-46 2-38 (374)
111 3s40_A Diacylglycerol kinase; 52.9 33 0.0011 31.7 7.4 83 279-387 10-98 (304)
112 2r8r_A Sensor protein; KDPD, P 50.6 23 0.00077 31.3 5.4 39 9-47 5-43 (228)
113 1t35_A Hypothetical protein YV 49.0 39 0.0013 28.9 6.6 103 267-386 23-135 (191)
114 1id1_A Putative potassium chan 48.2 13 0.00044 30.2 3.3 34 9-47 2-35 (153)
115 2fb6_A Conserved hypothetical 47.8 23 0.00078 27.6 4.6 48 6-53 3-54 (117)
116 4gi5_A Quinone reductase; prot 47.1 29 0.00098 31.8 5.8 39 6-44 18-59 (280)
117 2ywr_A Phosphoribosylglycinami 46.5 99 0.0034 26.8 9.1 102 11-142 2-111 (216)
118 1p3y_1 MRSD protein; flavoprot 46.1 43 0.0015 28.7 6.4 137 280-429 10-185 (194)
119 2vqe_B 30S ribosomal protein S 46.1 1E+02 0.0035 27.6 9.1 33 111-143 157-191 (256)
120 3s2u_A UDP-N-acetylglucosamine 45.9 48 0.0016 31.3 7.5 27 356-384 92-121 (365)
121 1psw_A ADP-heptose LPS heptosy 45.9 1.1E+02 0.0038 28.1 10.1 99 11-141 181-288 (348)
122 1qkk_A DCTD, C4-dicarboxylate 45.7 83 0.0028 24.7 8.1 62 377-445 74-135 (155)
123 3pdi_B Nitrogenase MOFE cofact 45.7 32 0.0011 33.9 6.4 87 10-139 313-399 (458)
124 3lqk_A Dipicolinate synthase s 45.7 89 0.003 26.8 8.4 145 279-429 8-185 (201)
125 2zki_A 199AA long hypothetical 45.3 23 0.00077 30.1 4.7 38 9-47 3-41 (199)
126 1qgu_B Protein (nitrogenase mo 44.9 87 0.003 31.3 9.5 34 10-48 360-393 (519)
127 1xmp_A PURE, phosphoribosylami 44.8 1.3E+02 0.0046 24.9 14.1 146 279-451 11-165 (170)
128 2g1u_A Hypothetical protein TM 44.3 50 0.0017 26.6 6.5 35 8-47 17-51 (155)
129 3av3_A Phosphoribosylglycinami 43.9 1.5E+02 0.0051 25.6 9.7 102 11-142 4-113 (212)
130 2hy5_A Putative sulfurtransfer 43.4 51 0.0017 25.9 6.2 43 11-53 1-47 (130)
131 3dhn_A NAD-dependent epimerase 43.0 38 0.0013 29.1 5.8 34 10-47 4-37 (227)
132 1o4v_A Phosphoribosylaminoimid 41.8 1.6E+02 0.0054 24.8 12.2 142 279-450 13-164 (183)
133 3kjh_A CO dehydrogenase/acetyl 41.7 19 0.00065 31.6 3.7 36 11-46 1-36 (254)
134 3ghy_A Ketopantoate reductase 41.3 14 0.0005 34.6 2.9 48 10-67 3-50 (335)
135 2bln_A Protein YFBG; transfera 40.7 49 0.0017 30.6 6.4 94 11-142 1-106 (305)
136 2l2q_A PTS system, cellobiose- 40.4 35 0.0012 26.0 4.5 36 9-44 3-38 (109)
137 3tov_A Glycosyl transferase fa 40.3 1.6E+02 0.0053 27.5 10.1 99 11-141 186-288 (349)
138 1lss_A TRK system potassium up 40.3 20 0.00067 28.2 3.2 33 10-47 4-36 (140)
139 1bg6_A N-(1-D-carboxylethyl)-L 39.7 20 0.00067 33.8 3.6 41 8-53 2-43 (359)
140 1rcu_A Conserved hypothetical 39.6 1.2E+02 0.0042 25.8 8.3 95 267-385 48-149 (195)
141 3l4e_A Uncharacterized peptida 39.4 72 0.0025 27.5 6.9 47 267-313 16-62 (206)
142 3rg8_A Phosphoribosylaminoimid 39.2 1.6E+02 0.0055 24.2 9.9 140 280-448 3-149 (159)
143 3l8h_A Putative haloacid dehal 39.0 1.4E+02 0.0048 24.1 8.7 23 27-49 32-54 (179)
144 3lrx_A Putative hydrogenase; a 39.0 28 0.00096 28.5 4.1 37 10-49 23-59 (158)
145 3zq6_A Putative arsenical pump 38.8 35 0.0012 31.7 5.2 42 7-48 9-52 (324)
146 3hn2_A 2-dehydropantoate 2-red 38.7 26 0.0009 32.4 4.3 46 11-67 3-48 (312)
147 1mio_B Nitrogenase molybdenum 37.8 88 0.003 30.7 8.1 26 111-139 384-409 (458)
148 1jx7_A Hypothetical protein YC 37.7 61 0.0021 24.5 5.7 42 12-53 3-49 (117)
149 3lyu_A Putative hydrogenase; t 37.7 34 0.0012 27.4 4.3 35 11-48 19-53 (142)
150 3e8x_A Putative NAD-dependent 37.4 51 0.0017 28.6 5.9 52 8-68 19-72 (236)
151 2gk4_A Conserved hypothetical 37.4 63 0.0021 28.5 6.2 26 21-48 28-53 (232)
152 3czc_A RMPB; alpha/beta sandwi 36.6 34 0.0012 26.1 3.9 37 8-44 16-54 (110)
153 3sbx_A Putative uncharacterize 36.4 1E+02 0.0034 26.2 7.2 118 267-402 34-164 (189)
154 3i83_A 2-dehydropantoate 2-red 36.3 20 0.0007 33.3 3.1 46 11-67 3-48 (320)
155 3ew7_A LMO0794 protein; Q8Y8U8 36.2 39 0.0013 28.8 4.8 34 11-48 1-34 (221)
156 3o1l_A Formyltetrahydrofolate 36.1 2.6E+02 0.0088 25.6 10.7 106 7-142 102-212 (302)
157 2qv7_A Diacylglycerol kinase D 36.0 30 0.001 32.4 4.2 82 281-387 28-115 (337)
158 1pjq_A CYSG, siroheme synthase 35.9 3.1E+02 0.011 26.6 11.8 144 278-448 12-168 (457)
159 2pju_A Propionate catabolism o 35.5 49 0.0017 29.1 5.2 29 357-388 64-92 (225)
160 3ezx_A MMCP 1, monomethylamine 35.1 60 0.002 28.2 5.7 64 235-318 120-185 (215)
161 3hwr_A 2-dehydropantoate 2-red 34.9 18 0.00063 33.6 2.5 41 8-53 17-57 (318)
162 2c5m_A CTP synthase; cytidine 34.8 30 0.001 31.1 3.6 42 9-50 21-65 (294)
163 2r85_A PURP protein PF1517; AT 34.6 36 0.0012 31.4 4.6 34 10-49 2-35 (334)
164 3of5_A Dethiobiotin synthetase 34.5 43 0.0015 29.4 4.7 35 10-44 3-39 (228)
165 2ph1_A Nucleotide-binding prot 34.5 30 0.001 31.0 3.8 40 8-47 15-56 (262)
166 2bon_A Lipid kinase; DAG kinas 33.9 49 0.0017 30.9 5.3 81 279-387 31-119 (332)
167 3n0v_A Formyltetrahydrofolate 33.9 2.7E+02 0.0092 25.2 10.2 108 5-142 85-197 (286)
168 3n7t_A Macrophage binding prot 33.8 78 0.0027 28.2 6.4 37 11-47 10-57 (247)
169 3ius_A Uncharacterized conserv 33.7 51 0.0017 29.5 5.4 48 11-68 6-54 (286)
170 3h2s_A Putative NADH-flavin re 33.6 64 0.0022 27.5 5.8 49 11-68 1-50 (224)
171 3kkl_A Probable chaperone prot 33.6 64 0.0022 28.6 5.8 38 10-47 3-51 (244)
172 3bul_A Methionine synthase; tr 33.5 47 0.0016 33.8 5.4 41 8-48 96-136 (579)
173 3i6i_A Putative leucoanthocyan 33.5 34 0.0012 31.9 4.2 44 1-48 1-44 (346)
174 3qvl_A Putative hydantoin race 32.7 2.3E+02 0.0078 25.0 9.3 37 11-47 2-39 (245)
175 3llv_A Exopolyphosphatase-rela 32.5 27 0.00093 27.6 2.9 48 10-67 6-54 (141)
176 1ydg_A Trp repressor binding p 32.3 61 0.0021 27.6 5.4 39 8-46 4-43 (211)
177 2pju_A Propionate catabolism o 32.3 49 0.0017 29.1 4.7 108 22-141 46-180 (225)
178 3obi_A Formyltetrahydrofolate 32.3 2.9E+02 0.0098 25.1 10.2 108 5-142 84-197 (288)
179 4hb9_A Similarities with proba 32.2 29 0.00099 33.0 3.5 29 11-44 2-30 (412)
180 3qua_A Putative uncharacterize 32.2 93 0.0032 26.7 6.3 102 267-386 43-155 (199)
181 3nbm_A PTS system, lactose-spe 31.9 56 0.0019 24.9 4.4 40 6-45 2-41 (108)
182 2afh_E Nitrogenase iron protei 31.7 44 0.0015 30.2 4.5 34 11-44 2-36 (289)
183 3tqr_A Phosphoribosylglycinami 31.6 2E+02 0.0068 24.9 8.5 104 9-142 4-114 (215)
184 2pk3_A GDP-6-deoxy-D-LYXO-4-he 31.6 31 0.0011 31.6 3.5 40 5-47 6-45 (321)
185 1cp2_A CP2, nitrogenase iron p 31.5 42 0.0014 29.9 4.3 33 13-45 4-36 (269)
186 4ehi_A Bifunctional purine bio 31.4 38 0.0013 33.7 4.0 54 11-75 25-80 (534)
187 4etn_A LMPTP, low molecular we 31.1 45 0.0015 28.3 4.1 44 3-47 26-74 (184)
188 2d1p_A TUSD, hypothetical UPF0 30.8 96 0.0033 24.8 5.8 44 10-53 12-59 (140)
189 3ug7_A Arsenical pump-driving 30.7 67 0.0023 30.2 5.7 40 9-48 24-64 (349)
190 3cky_A 2-hydroxymethyl glutara 30.5 41 0.0014 30.6 4.1 34 8-46 2-35 (301)
191 1pno_A NAD(P) transhydrogenase 30.3 49 0.0017 27.4 3.9 38 11-48 24-64 (180)
192 3gpi_A NAD-dependent epimerase 30.1 58 0.002 29.1 5.1 46 10-68 3-48 (286)
193 1hdo_A Biliverdin IX beta redu 29.9 75 0.0026 26.5 5.5 33 11-47 4-36 (206)
194 4dll_A 2-hydroxy-3-oxopropiona 29.9 58 0.002 30.2 5.1 35 8-47 29-63 (320)
195 1d4o_A NADP(H) transhydrogenas 29.8 50 0.0017 27.5 3.9 38 11-48 23-63 (184)
196 2yvq_A Carbamoyl-phosphate syn 29.7 1.3E+02 0.0046 24.0 6.6 98 11-138 25-130 (143)
197 3eag_A UDP-N-acetylmuramate:L- 29.7 51 0.0018 30.6 4.7 50 8-66 2-54 (326)
198 2jk1_A HUPR, hydrogenase trans 29.4 1.7E+02 0.0059 22.2 7.3 60 377-442 71-130 (139)
199 1wcv_1 SOJ, segregation protei 29.1 44 0.0015 29.6 4.0 39 9-47 4-44 (257)
200 4hcj_A THIJ/PFPI domain protei 29.0 89 0.003 26.1 5.6 42 6-48 3-45 (177)
201 2qs7_A Uncharacterized protein 28.9 66 0.0023 25.8 4.6 40 14-53 12-51 (144)
202 3dfu_A Uncharacterized protein 28.9 39 0.0013 29.9 3.4 35 8-47 4-38 (232)
203 2i2c_A Probable inorganic poly 28.8 22 0.00075 32.3 1.8 28 357-386 36-69 (272)
204 2q5c_A NTRC family transcripti 28.7 39 0.0013 28.9 3.4 30 356-388 51-80 (196)
205 3gi1_A LBP, laminin-binding pr 28.7 1.7E+02 0.0057 26.5 7.9 78 38-139 178-257 (286)
206 2lnd_A De novo designed protei 28.0 80 0.0027 22.4 4.1 49 376-429 49-100 (112)
207 4eg0_A D-alanine--D-alanine li 27.9 85 0.0029 28.8 5.9 39 10-48 13-55 (317)
208 3ea0_A ATPase, para family; al 27.8 51 0.0017 28.7 4.1 39 9-47 2-43 (245)
209 3dqp_A Oxidoreductase YLBE; al 27.7 56 0.0019 27.9 4.3 34 11-48 1-34 (219)
210 2lpm_A Two-component response 27.7 55 0.0019 25.5 3.8 37 100-139 44-85 (123)
211 1p9o_A Phosphopantothenoylcyst 27.3 41 0.0014 31.3 3.4 22 27-48 68-89 (313)
212 2fsv_C NAD(P) transhydrogenase 27.3 57 0.002 27.7 3.9 38 11-48 47-87 (203)
213 2ew2_A 2-dehydropantoate 2-red 27.3 41 0.0014 30.7 3.5 39 10-53 3-42 (316)
214 3ih5_A Electron transfer flavo 27.2 48 0.0017 28.9 3.7 103 12-139 5-121 (217)
215 2vrn_A Protease I, DR1199; cys 27.1 1.3E+02 0.0045 24.9 6.5 41 7-48 6-46 (190)
216 3io3_A DEHA2D07832P; chaperone 27.1 63 0.0022 30.4 4.8 41 8-48 15-58 (348)
217 2rjn_A Response regulator rece 27.0 36 0.0012 27.0 2.7 63 377-446 78-141 (154)
218 3trh_A Phosphoribosylaminoimid 27.0 2.7E+02 0.0092 23.1 13.2 143 280-448 7-157 (169)
219 4g65_A TRK system potassium up 26.9 18 0.00062 35.8 0.9 34 9-47 2-35 (461)
220 1djl_A Transhydrogenase DIII; 26.8 59 0.002 27.7 3.9 38 11-48 46-86 (207)
221 1yt5_A Inorganic polyphosphate 26.8 27 0.00093 31.4 2.1 52 356-429 41-95 (258)
222 3rfo_A Methionyl-tRNA formyltr 26.5 68 0.0023 29.8 4.8 35 8-47 2-36 (317)
223 1f4p_A Flavodoxin; electron tr 26.4 60 0.0021 25.7 4.0 37 11-47 1-38 (147)
224 3end_A Light-independent proto 26.4 67 0.0023 29.3 4.8 40 7-46 37-77 (307)
225 1vco_A CTP synthetase; tetrame 26.4 60 0.002 32.8 4.6 37 11-47 12-51 (550)
226 1e2b_A Enzyme IIB-cellobiose; 26.3 1.2E+02 0.0041 22.8 5.4 36 10-45 3-38 (106)
227 3ox4_A Alcohol dehydrogenase 2 26.1 47 0.0016 31.8 3.7 46 267-314 20-65 (383)
228 4b4k_A N5-carboxyaminoimidazol 26.0 2.9E+02 0.01 23.1 14.5 141 279-450 22-175 (181)
229 3nva_A CTP synthase; rossman f 25.9 83 0.0028 31.5 5.4 42 10-51 2-46 (535)
230 1u0t_A Inorganic polyphosphate 25.8 26 0.00091 32.4 1.8 32 353-386 72-107 (307)
231 3l4b_C TRKA K+ channel protien 25.8 28 0.00096 30.1 1.9 32 11-47 1-32 (218)
232 3bfv_A CAPA1, CAPB2, membrane 25.7 77 0.0026 28.5 5.0 40 8-47 79-120 (271)
233 3hly_A Flavodoxin-like domain; 25.7 88 0.003 25.5 4.9 37 11-47 1-38 (161)
234 3fwz_A Inner membrane protein 25.6 40 0.0014 26.7 2.7 48 10-67 7-55 (140)
235 3f6r_A Flavodoxin; FMN binding 25.6 92 0.0031 24.6 5.0 38 11-48 2-40 (148)
236 3kcn_A Adenylate cyclase homol 25.4 1.9E+02 0.0064 22.4 7.0 53 376-435 74-127 (151)
237 1ks9_A KPA reductase;, 2-dehyd 25.4 50 0.0017 29.7 3.7 32 11-47 1-32 (291)
238 2xj4_A MIPZ; replication, cell 25.4 76 0.0026 28.6 4.9 37 11-47 4-42 (286)
239 1t1j_A Hypothetical protein; s 25.4 99 0.0034 24.3 4.8 33 10-42 7-47 (125)
240 3kbq_A Protein TA0487; structu 25.3 1.4E+02 0.0048 24.9 6.1 83 281-387 6-98 (172)
241 1eiw_A Hypothetical protein MT 25.3 82 0.0028 24.2 4.3 65 354-429 36-109 (111)
242 2an1_A Putative kinase; struct 25.2 30 0.001 31.6 2.1 30 355-386 62-95 (292)
243 3qha_A Putative oxidoreductase 25.2 41 0.0014 30.8 3.0 33 9-46 14-46 (296)
244 2bru_C NAD(P) transhydrogenase 25.1 56 0.0019 27.2 3.3 38 11-48 31-71 (186)
245 2woo_A ATPase GET3; tail-ancho 25.1 78 0.0027 29.4 5.0 40 10-49 18-58 (329)
246 1qyd_A Pinoresinol-lariciresin 24.9 71 0.0024 28.9 4.7 34 10-47 4-37 (313)
247 3k9g_A PF-32 protein; ssgcid, 24.9 70 0.0024 28.4 4.6 37 9-46 25-63 (267)
248 3oow_A Phosphoribosylaminoimid 24.8 2.9E+02 0.01 22.8 14.3 147 280-452 6-160 (166)
249 1rpn_A GDP-mannose 4,6-dehydra 24.8 73 0.0025 29.2 4.8 37 7-47 11-47 (335)
250 3e5n_A D-alanine-D-alanine lig 24.8 43 0.0015 32.1 3.2 43 5-47 17-63 (386)
251 1gsa_A Glutathione synthetase; 24.7 61 0.0021 29.4 4.2 37 11-47 2-41 (316)
252 3euw_A MYO-inositol dehydrogen 24.3 4.1E+02 0.014 24.3 10.1 109 280-409 6-123 (344)
253 2w36_A Endonuclease V; hypoxan 24.3 70 0.0024 28.1 4.1 38 98-139 93-137 (225)
254 3q9l_A Septum site-determining 24.2 84 0.0029 27.5 4.9 36 12-47 3-40 (260)
255 1z82_A Glycerol-3-phosphate de 24.1 53 0.0018 30.6 3.6 39 10-53 14-53 (335)
256 2rh8_A Anthocyanidin reductase 24.1 80 0.0027 29.0 4.9 33 10-46 9-41 (338)
257 2a5l_A Trp repressor binding p 23.9 1E+02 0.0035 25.8 5.2 38 10-47 5-43 (200)
258 3k96_A Glycerol-3-phosphate de 23.8 46 0.0016 31.5 3.2 33 10-47 29-61 (356)
259 3goc_A Endonuclease V; alpha-b 23.8 89 0.003 27.6 4.7 40 96-139 95-141 (237)
260 2pn1_A Carbamoylphosphate synt 23.8 86 0.003 28.8 5.1 34 8-47 2-37 (331)
261 2q62_A ARSH; alpha/beta, flavo 23.7 1E+02 0.0034 27.4 5.2 40 6-45 30-72 (247)
262 2gkg_A Response regulator homo 23.7 1.3E+02 0.0043 22.3 5.3 46 377-429 79-124 (127)
263 1rw7_A YDR533CP; alpha-beta sa 23.6 1.4E+02 0.0047 26.2 6.2 38 11-48 4-52 (243)
264 2qyt_A 2-dehydropantoate 2-red 23.4 29 0.00098 31.9 1.6 39 10-53 8-52 (317)
265 3nrb_A Formyltetrahydrofolate 23.2 4.2E+02 0.014 24.0 11.3 107 6-142 84-196 (287)
266 2raf_A Putative dinucleotide-b 23.2 62 0.0021 27.8 3.7 35 7-46 16-50 (209)
267 3fni_A Putative diflavin flavo 22.9 1.6E+02 0.0056 23.8 6.1 39 9-47 3-42 (159)
268 1tvm_A PTS system, galactitol- 22.7 1.3E+02 0.0045 22.9 5.1 37 9-45 20-57 (113)
269 1g3q_A MIND ATPase, cell divis 22.6 96 0.0033 26.7 4.9 36 12-47 3-40 (237)
270 1z7e_A Protein aRNA; rossmann 22.5 65 0.0022 33.3 4.3 95 11-143 1-107 (660)
271 3klj_A NAD(FAD)-dependent dehy 22.3 42 0.0014 32.1 2.6 42 1-48 1-42 (385)
272 2pzm_A Putative nucleotide sug 22.2 96 0.0033 28.4 5.1 34 9-46 19-52 (330)
273 1iow_A DD-ligase, DDLB, D-ALA\ 22.1 1.3E+02 0.0045 27.0 6.0 39 10-48 2-44 (306)
274 3q2i_A Dehydrogenase; rossmann 22.1 2.5E+02 0.0087 25.9 8.1 110 279-409 14-133 (354)
275 1xrs_B D-lysine 5,6-aminomutas 22.0 46 0.0016 30.0 2.6 58 8-70 118-188 (262)
276 3enk_A UDP-glucose 4-epimerase 22.0 96 0.0033 28.4 5.0 35 8-46 3-37 (341)
277 1ehi_A LMDDL2, D-alanine:D-lac 21.9 77 0.0026 30.1 4.4 38 9-46 2-44 (377)
278 1g63_A Epidermin modifying enz 21.9 3.2E+02 0.011 22.8 7.7 111 281-405 5-140 (181)
279 4hn9_A Iron complex transport 21.9 72 0.0025 29.6 4.1 31 111-141 115-145 (335)
280 3l77_A Short-chain alcohol deh 21.8 97 0.0033 26.7 4.8 34 11-47 2-35 (235)
281 2ywx_A Phosphoribosylaminoimid 21.7 3.3E+02 0.011 22.2 12.1 134 282-448 2-144 (157)
282 4e21_A 6-phosphogluconate dehy 21.7 51 0.0018 31.2 3.0 38 5-47 17-54 (358)
283 3mjf_A Phosphoribosylamine--gl 21.6 1.8E+02 0.0061 28.1 7.0 25 10-39 3-27 (431)
284 3f67_A Putative dienelactone h 21.5 1.3E+02 0.0043 25.4 5.5 36 11-46 32-67 (241)
285 1ihu_A Arsenical pump-driving 21.5 1E+02 0.0034 31.3 5.4 40 9-48 6-46 (589)
286 1evy_A Glycerol-3-phosphate de 21.5 46 0.0016 31.4 2.7 31 12-47 17-47 (366)
287 2woj_A ATPase GET3; tail-ancho 21.5 83 0.0028 29.7 4.4 40 9-48 16-58 (354)
288 1jkx_A GART;, phosphoribosylgl 21.4 3.9E+02 0.013 22.9 10.8 102 11-142 1-110 (212)
289 2rir_A Dipicolinate synthase, 21.3 1.2E+02 0.0039 27.7 5.3 35 6-45 3-37 (300)
290 3i7m_A XAA-Pro dipeptidase; st 21.0 43 0.0015 26.5 2.0 32 22-53 1-32 (140)
291 3doj_A AT3G25530, dehydrogenas 21.0 77 0.0026 29.1 4.1 35 7-46 18-52 (310)
292 3ce9_A Glycerol dehydrogenase; 21.0 1.2E+02 0.0042 28.3 5.6 94 267-388 23-122 (354)
293 3grc_A Sensor protein, kinase; 20.9 2.6E+02 0.009 21.0 6.9 48 377-429 79-126 (140)
294 3foj_A Uncharacterized protein 20.8 2.2E+02 0.0075 20.6 6.0 34 9-46 55-88 (100)
295 3ego_A Probable 2-dehydropanto 20.8 54 0.0019 30.1 2.9 46 10-66 2-48 (307)
296 1pq4_A Periplasmic binding pro 20.7 3.4E+02 0.012 24.5 8.4 77 39-141 190-268 (291)
297 3lou_A Formyltetrahydrofolate 20.7 4.8E+02 0.016 23.6 10.7 106 7-142 92-202 (292)
298 3tqq_A Methionyl-tRNA formyltr 20.6 89 0.003 28.9 4.3 33 10-47 2-34 (314)
299 2x4g_A Nucleoside-diphosphate- 20.5 63 0.0022 29.7 3.4 35 9-47 12-46 (342)
300 1kyq_A Met8P, siroheme biosynt 20.4 4.7E+02 0.016 23.5 9.9 148 278-448 13-210 (274)
301 1fy2_A Aspartyl dipeptidase; s 20.4 1.5E+02 0.005 25.9 5.6 45 267-313 22-66 (229)
302 2x5n_A SPRPN10, 26S proteasome 20.4 1.3E+02 0.0044 25.4 5.1 62 10-71 106-173 (192)
303 4grd_A N5-CAIR mutase, phospho 20.3 3.7E+02 0.013 22.3 13.2 141 278-449 11-164 (173)
304 3ia7_A CALG4; glycosysltransfe 20.3 92 0.0031 29.2 4.6 35 280-316 6-40 (402)
305 4g6h_A Rotenone-insensitive NA 20.2 57 0.0019 32.5 3.1 35 9-48 41-75 (502)
306 3ic5_A Putative saccharopine d 20.2 88 0.003 23.2 3.7 48 10-67 5-54 (118)
307 2ark_A Flavodoxin; FMN, struct 20.2 1.1E+02 0.0038 25.4 4.6 39 10-48 4-44 (188)
308 4g81_D Putative hexonate dehyd 20.2 3.5E+02 0.012 23.9 8.1 32 12-46 10-41 (255)
309 2o1e_A YCDH; alpha-beta protei 20.1 3.4E+02 0.012 24.8 8.3 78 38-139 189-268 (312)
310 3md9_A Hemin-binding periplasm 20.1 90 0.0031 27.4 4.2 30 111-140 58-89 (255)
311 3i4f_A 3-oxoacyl-[acyl-carrier 20.1 1.4E+02 0.0047 26.3 5.5 38 7-47 3-40 (264)
312 1ta9_A Glycerol dehydrogenase; 20.0 2.6E+02 0.0089 27.2 7.8 94 267-387 80-178 (450)
313 2h31_A Multifunctional protein 20.0 5.9E+02 0.02 24.5 12.0 142 278-448 264-412 (425)
314 3ko8_A NAD-dependent epimerase 20.0 1.7E+02 0.0057 26.3 6.2 33 11-47 1-33 (312)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.4e-66 Score=525.46 Aligned_cols=434 Identities=26% Similarity=0.431 Sum_probs=354.9
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCccchhhhcCCCCCC-CCceEEEcCCCCCCCCCCCCC
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIG--TRVTFATTIFAYRRMANSPTPE-DGLSFASFSDGYDDGFNSKQN 81 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~G--h~V~~~~~~~~~~~v~~~~~~~-~g~~~~~i~~~~~~~~~~~~~ 81 (470)
+..+.++||+++|+|++||++|++.||+.|+++| +.|||++++.+...+....... .+++|+++|+++++..+...+
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence 3345678999999999999999999999999999 9999999987666662321100 579999999999887766555
Q ss_pred CchhhHHHHHHHhHHHHHHHHHhhhh-cCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCc
Q 041902 82 DPRRYVSEFKRRSSEALTEIITGSEN-QGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDL 160 (470)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~ 160 (470)
. ...+..+...+...+++.++.+.+ .+ .++|+||+|.+++|+..+|+++|||++.|++++++.+..+++.+......
T Consensus 88 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 88 P-REPIFLFIKAMQENFKHVIDEAVAETG-KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp T-THHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 4 556666666666667777776532 23 57999999999999999999999999999999999988887765322111
Q ss_pred c--ccccCCcc-cCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhc--C
Q 041902 161 I--EEKVNDLI-ELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAID--K 235 (470)
Q Consensus 161 p--~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~--~ 235 (470)
. ....++.+ .+|++|.++..+++.++.. .....+...+.+..+...++ +.+++||+++||++..+.+. -
T Consensus 166 ~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~~~--~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 166 GSKEVHDVKSIDVLPGFPELKASDLPEGVIK----DIDVPFATMLHKMGLELPRA--NAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp CHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS----CTTSHHHHHHHHHHHHGGGS--SCEEESSCGGGCHHHHHHHHTTS
T ss_pred CCCccccccccccCCCCCCcChhhCchhhcc----CCchHHHHHHHHHHHhhccC--CEEEECChhHhCHHHHHHHHhcC
Confidence 1 11112233 4899998888898887652 22334556677777777777 99999999999998777765 2
Q ss_pred CCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEE
Q 041902 236 FNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVI 315 (470)
Q Consensus 236 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 315 (470)
+++++|||++.....+. .. ++.++.+||+.++++++|||||||+...+.+++.+++.+|+..+++|||++
T Consensus 240 ~~v~~vGPl~~~~~~~~--------~~--~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQRK--------VS--DEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp SCEEECCCHHHHSCCSC--------CC--CTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CCEEEECCccccccccc--------cc--chHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 46999999986521110 00 236799999998899999999999998888999999999999999999999
Q ss_pred ecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHH
Q 041902 316 REHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAK 395 (470)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~ 395 (470)
+.. ... .+|+++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+
T Consensus 310 ~~~-~~~------~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 310 RGD-PKE------KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp CSC-HHH------HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred CCc-chh------cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 866 323 6788888889999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhh
Q 041902 396 IIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGD---EFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFG 467 (470)
Q Consensus 396 rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~---~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 467 (470)
++++.+|+|+.+.. +.++.++|.++|+++|. ++ +||++|+++++++++++.+||||++++++|+++|.
T Consensus 383 ~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 383 LTESVLEIGVGVDN---GVLTKESIKKALELTMS-SEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHTTSCSEEECGG---GSCCHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHhhCeeEEecC---CCCCHHHHHHHHHHHHC-CChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99972399999986 68999999999999999 77 89999999999999999999999999999999985
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=9.5e-61 Score=491.74 Aligned_cols=444 Identities=28% Similarity=0.525 Sum_probs=330.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCC------CCCceEEEcCCCCCCCC---CC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTP------EDGLSFASFSDGYDDGF---NS 78 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~------~~g~~~~~i~~~~~~~~---~~ 78 (470)
+.++||+|+|+|++||++|++.||++|++|||+|||++++.+...+ ..... ..|++|+++|++++... ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~-~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~ 84 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRL-LKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDV 84 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHH-C------------CEEEEEECCCCC--------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhh-ccccccccccCCCceEEEECCCCCCCcccccCc
Confidence 4568999999999999999999999999999999999999887766 33100 02899999998776621 11
Q ss_pred CCCCchhhHHHHHHHhHHHHHHHHHhhhhc--CCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhh--
Q 041902 79 KQNDPRRYVSEFKRRSSEALTEIITGSENQ--GAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYF-- 154 (470)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~-- 154 (470)
..+. ..++..+...+...++++++.+..+ . .++|+||+|.++.|+..+|+++|||++.+++++++.+....+.+
T Consensus 85 ~~~~-~~~~~~~~~~~~~~l~~ll~~l~~~~~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 85 SQDV-PTLCQSVRKNFLKPYCELLTRLNHSTNV-PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp -CCH-HHHHHHHTTSSHHHHHHHHHHHHTCSSS-CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred chhH-HHHHHHHHHHhhHHHHHHHHHHhhhccC-CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1222 3344444456778888888887642 2 57999999999999999999999999999999887666543322
Q ss_pred --hccCCccccc--c----CCc-ccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhh
Q 041902 155 --YGYGDLIEEK--V----NDL-IELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDAL 225 (470)
Q Consensus 155 --~~~~~~p~~~--~----~~~-~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 225 (470)
.++.+..... . ... ..+|+++.++..+++.++.. ..........+.+..+..... +.+++||+++|
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~vl~nt~~~l 237 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRT---TNPNDIMLEFFIEVADRVNKD--TTILLNTFNEL 237 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCC---SCTTCHHHHHHHHHHHTCCTT--CCEEESSCGGG
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhcc---CCcccHHHHHHHHHHHhhccC--CEEEEcChHHH
Confidence 1121111100 0 111 13566665555555555432 111222333444444444555 89999999999
Q ss_pred hHHHHHHhc--CCCeeEeccccCC-CccCC---cccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHH
Q 041902 226 EAETLRAID--KFNMIAIGPLVAS-ALWDG---KELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEE 299 (470)
Q Consensus 226 ~~~~~~~~~--~~~~~~vGpl~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~ 299 (470)
|++..+.++ -.++++|||++.. +.... .......++.. + .++.+|++.++++++|||||||....+.+++..
T Consensus 238 e~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~ 315 (482)
T 2pq6_A 238 ESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKE-D-TECLDWLESKEPGSVVYVNFGSTTVMTPEQLLE 315 (482)
T ss_dssp GHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC-----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHH
T ss_pred hHHHHHHHHHhCCcEEEEcCCccccccccccccccccccccccc-c-hHHHHHHhcCCCCceEEEecCCcccCCHHHHHH
Confidence 998666554 2469999999763 11100 00000122222 2 578999999888899999999998878888999
Q ss_pred HHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCC
Q 041902 300 IARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGV 379 (470)
Q Consensus 300 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~Gv 379 (470)
++.+|+..+.+|+|+++.. ...+ ....+|+++.+++++|+++++|+||.++|+|+++++||||||+||++||+++||
T Consensus 316 ~~~~l~~~~~~~l~~~~~~-~~~~--~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~Gv 392 (482)
T 2pq6_A 316 FAWGLANCKKSFLWIIRPD-LVIG--GSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGV 392 (482)
T ss_dssp HHHHHHHTTCEEEEECCGG-GSTT--TGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTC
T ss_pred HHHHHHhcCCcEEEEEcCC-cccc--ccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCC
Confidence 9999999999999999754 2110 001367788778899999999999999999999999999999999999999999
Q ss_pred cEeeccccchhhHHHHHHH-hhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHHhcCCCc
Q 041902 380 PVVAFPQWTDQGTNAKIIV-DFCKTGVRVKANEEGILESDEIKRCLELVMGEGD---EFRGNSLKWKDLAREAAKQGGSS 455 (470)
Q Consensus 380 P~v~~P~~~DQ~~nA~rl~-~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~---~~r~~a~~~~~~~~~~~~~~~~~ 455 (470)
|||++|++.||+.||++++ + +|+|+.+. ..++.++|.++|+++|. |+ +||++|+++++++++++.+|||+
T Consensus 393 P~i~~P~~~dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGss 466 (482)
T 2pq6_A 393 PMLCWPFFADQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIA-GDKGKKMKQKAMELKKKAEENTRPGGCS 466 (482)
T ss_dssp CEEECCCSTTHHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHT-SHHHHHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred CEEecCcccchHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 9999999999999999997 6 99999997 36999999999999999 88 69999999999999999999999
Q ss_pred HHHHHHHHHHhhcCC
Q 041902 456 YKNLKAFVDDFGTSK 470 (470)
Q Consensus 456 ~~~~~~~~~~l~~~~ 470 (470)
.+++++|++.|...|
T Consensus 467 ~~~l~~~v~~~~~~~ 481 (482)
T 2pq6_A 467 YMNLNKVIKDVLLKQ 481 (482)
T ss_dssp HHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999986653
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.2e-60 Score=482.55 Aligned_cols=434 Identities=24% Similarity=0.443 Sum_probs=330.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCccchhhhcCCCCC--CCCceEEEcCCCCCCCCCCCCCCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTR--VTFATTIFAYRRMANSPTP--EDGLSFASFSDGYDDGFNSKQNDP 83 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~--V~~~~~~~~~~~v~~~~~~--~~g~~~~~i~~~~~~~~~~~~~~~ 83 (470)
++++||+++|+|++||++|++.||++|++|||+ |||++++.....+...... ..+++|+++++++++..+.....
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~- 83 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRP- 83 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCT-
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCCh-
Confidence 346799999999999999999999999999755 5778887655544221110 04799999998887654332233
Q ss_pred hhhHHHHHHHhHHHHHHHHHhhhhc-CCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhh--ccCCc
Q 041902 84 RRYVSEFKRRSSEALTEIITGSENQ-GAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFY--GYGDL 160 (470)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~--~~~~~ 160 (470)
...+..+...+...++++++.+.++ + .+||+||+|.++.|+..+|+++|||++.+++++++.+....+... .....
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETG-RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHT-CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccC-CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 4455555555556666666654321 3 579999999998999999999999999999998876655433221 00011
Q ss_pred cc--cccCC-cccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhc--C
Q 041902 161 IE--EKVND-LIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAID--K 235 (470)
Q Consensus 161 p~--~~~~~-~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~--~ 235 (470)
+. ....+ ...+|+++.++..+++..+.. ......+...+.+..+..++. +.+++||+++||++..+.++ -
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~vl~ns~~~le~~~~~~~~~~~ 237 (456)
T 2c1x_A 163 SGIQGREDELLNFIPGMSKVRFRDLQEGIVF---GNLNSLFSRMLHRMGQVLPKA--TAVFINSFEELDDSLTNDLKSKL 237 (456)
T ss_dssp SCCTTCTTCBCTTSTTCTTCBGGGSCTTTSS---SCTTSHHHHHHHHHHHHGGGS--SCEEESSCGGGCHHHHHHHHHHS
T ss_pred cccccccccccccCCCCCcccHHhCchhhcC---CCcccHHHHHHHHHHHhhhhC--CEEEECChHHHhHHHHHHHHhcC
Confidence 10 00011 234788877666666654432 122223334444555555666 89999999999997655554 2
Q ss_pred CCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEE
Q 041902 236 FNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVI 315 (470)
Q Consensus 236 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 315 (470)
.++++|||+......+ . +. ...++.+|++.++++++|||||||....+.+++..++.+++..+.+|+|++
T Consensus 238 ~~~~~vGpl~~~~~~~-------~-~~--~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~ 307 (456)
T 2c1x_A 238 KTYLNIGPFNLITPPP-------V-VP--NTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSL 307 (456)
T ss_dssp SCEEECCCHHHHC-------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCEEEecCcccCcccc-------c-cc--chhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 3699999998642110 0 00 114688999988889999999999998788889999999999999999999
Q ss_pred ecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHH
Q 041902 316 REHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAK 395 (470)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~ 395 (470)
+.. ... .+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+
T Consensus 308 ~~~-~~~------~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~ 380 (456)
T 2c1x_A 308 RDK-ARV------HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGR 380 (456)
T ss_dssp CGG-GGG------GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred CCc-chh------hCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHH
Confidence 865 323 5677787778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh-cceeEeeecCCCCcCHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhhcCC
Q 041902 396 IIVDFC-KTGVRVKANEEGILESDEIKRCLELVMGEGD---EFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFGTSK 470 (470)
Q Consensus 396 rl~~~~-GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~---~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 470 (470)
++++ . |+|+.+.. ..++.++|.++|+++|. |+ +||++|+++++.+++++.+||||.+++++|++.|..+|
T Consensus 381 ~l~~-~~g~g~~l~~---~~~~~~~l~~~i~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 381 MVED-VLEIGVRIEG---GVFTKSGLMSCFDQILS-QEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454 (456)
T ss_dssp HHHH-TSCCEEECGG---GSCCHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHH-HhCeEEEecC---CCcCHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcC
Confidence 9998 8 99999975 67999999999999999 87 89999999999999999999999999999999998776
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.9e-59 Score=478.40 Aligned_cols=437 Identities=27% Similarity=0.443 Sum_probs=326.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCcc--chhhhcC--C-CCCCCCceEEEcCCCCCCCCCCCCC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRI-GTRVTFATTIF--AYRRMAN--S-PTPEDGLSFASFSDGYDDGFNSKQN 81 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~-Gh~V~~~~~~~--~~~~v~~--~-~~~~~g~~~~~i~~~~~~~~~~~~~ 81 (470)
++++||+++|+|++||++|++.||++|++| ||+|||++++. +...+.. . .. .+++|+++|+...+......+
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~--~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLP--SSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CC--TTEEEEECCCCCCTTSCTTCC
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccC--CCceEEEcCCCCCCCCCCchh
Confidence 456899999999999999999999999998 99999999887 3443311 1 01 689999998653221111112
Q ss_pred CchhhHHHHHHHhHHHHHHHHHhhhhcCCCCc-cEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhcc--C
Q 041902 82 DPRRYVSEFKRRSSEALTEIITGSENQGAQPF-TCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGY--G 158 (470)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p-Dlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~--~ 158 (470)
. ...+......+.+.++++++.+.. . .++ |+||+|.++.|+..+|+++|||++.+++++++.+...++.+... .
T Consensus 82 ~-~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 82 I-ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp H-HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred H-HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 2 222323344556777777777632 2 467 99999999899999999999999999999987776665544211 0
Q ss_pred CccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcC---
Q 041902 159 DLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDK--- 235 (470)
Q Consensus 159 ~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~--- 235 (470)
..+......+..+|+++++...+++..+.. +. ......+.+....+++. ..+++|++.++++.....+.+
T Consensus 159 ~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~---~~--~~~~~~~~~~~~~~~~~--~g~~~nt~~ele~~~~~~l~~~~~ 231 (480)
T 2vch_A 159 SCEFRELTEPLMLPGCVPVAGKDFLDPAQD---RK--DDAYKWLLHNTKRYKEA--EGILVNTFFELEPNAIKALQEPGL 231 (480)
T ss_dssp CSCGGGCSSCBCCTTCCCBCGGGSCGGGSC---TT--SHHHHHHHHHHHHGGGC--SEEEESCCTTTSHHHHHHHHSCCT
T ss_pred CCcccccCCcccCCCCCCCChHHCchhhhc---CC--chHHHHHHHHHHhcccC--CEEEEcCHHHHhHHHHHHHHhccc
Confidence 011000011334677776666666655432 11 12334444555566666 788999999999987766641
Q ss_pred --CCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 041902 236 --FNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLW 313 (470)
Q Consensus 236 --~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 313 (470)
.++++|||++...... . .. + .+.++.+||+.++++++|||||||+...+.+++.+++.+|+.++++|||
T Consensus 232 ~~~~v~~vGpl~~~~~~~--~-----~~-~-~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw 302 (480)
T 2vch_A 232 DKPPVYPVGPLVNIGKQE--A-----KQ-T-EESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLW 302 (480)
T ss_dssp TCCCEEECCCCCCCSCSC--C------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEeccccccccc--c-----Cc-c-chhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 3699999998652110 0 00 1 2378999999988889999999999988889999999999999999999
Q ss_pred EEecCCCCCC---------CCC-chhhhHHHHHHhCCCeEEee-ccChhhhccccccccceeccCchhhhhhhhcCCcEe
Q 041902 314 VIREHENKDK---------DKG-EDDVVMKYKEELNEKGMIVP-WCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVV 382 (470)
Q Consensus 314 ~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~nv~v~~-~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v 382 (470)
+++.. ...+ +.. .+.+|+++.+++.++++++. |+||.+||+|+++++||||||+||++||+++|||||
T Consensus 303 ~~~~~-~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i 381 (480)
T 2vch_A 303 VIRSP-SGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLI 381 (480)
T ss_dssp EECCC-CSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred EECCc-cccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEE
Confidence 99865 3110 001 12577788777777777775 999999999999999999999999999999999999
Q ss_pred eccccchhhHHHHHH-HhhhcceeEeeecCCCCcCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 041902 383 AFPQWTDQGTNAKII-VDFCKTGVRVKANEEGILESDEIKRCLELVMGE--GDEFRGNSLKWKDLAREAAKQGGSSYKNL 459 (470)
Q Consensus 383 ~~P~~~DQ~~nA~rl-~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~--~~~~r~~a~~~~~~~~~~~~~~~~~~~~~ 459 (470)
++|++.||+.||+++ ++ +|+|+.+...+.+.++.++|.++|+++|.+ +++||++|+++++++++++.++|++.+++
T Consensus 382 ~~P~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~ 460 (480)
T 2vch_A 382 AWPLYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460 (480)
T ss_dssp ECCCSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred eccccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 999999999999997 66 999999975211379999999999999973 35899999999999999999999999999
Q ss_pred HHHHHHhh
Q 041902 460 KAFVDDFG 467 (470)
Q Consensus 460 ~~~~~~l~ 467 (470)
++|++.|.
T Consensus 461 ~~~v~~~~ 468 (480)
T 2vch_A 461 SLVALKWK 468 (480)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.2e-57 Score=462.42 Aligned_cols=430 Identities=24% Similarity=0.393 Sum_probs=323.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccch-----hhhc--CCCCCCCCceEEEcCCCCCCCCCCC
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIFAY-----RRMA--NSPTPEDGLSFASFSDGYDDGFNSK 79 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~~~-----~~v~--~~~~~~~g~~~~~i~~~~~~~~~~~ 79 (470)
+++||+++|+|++||++|++.||++|+++ ||+|||++++... +.+. .... .+++|+++|++..+..+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~--~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQ--PQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSC--TTEEEEECCCCCCCCGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCC--CCceEEECCCCCCCccccc
Confidence 46899999999999999999999999999 9999999988652 2220 1111 5899999997631211101
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCC
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGD 159 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~ 159 (470)
... ...+......+...++++++.+ .. .++|+||+|.++.|+..+|+++|||++.+++++++.+...++.+.....
T Consensus 86 ~~~-~~~~~~~~~~~~~~~~~ll~~~--~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 86 KSP-EFYILTFLESLIPHVKATIKTI--LS-NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp GSH-HHHHHHHHHHTHHHHHHHHHHH--CC-TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred CCc-cHHHHHHHHhhhHHHHHHHHhc--cC-CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 111 1113333445666777777765 22 5799999999989999999999999999999998877776655432111
Q ss_pred ccccccCC---cccCCCC-CCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcC
Q 041902 160 LIEEKVND---LIELPGL-PPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDK 235 (470)
Q Consensus 160 ~p~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 235 (470)
.+...... ...+|++ +++...+++..+.. + . .....+.+....+++. +.+++||+++||+.....+.+
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~---~--~-~~~~~~~~~~~~~~~~--~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 162 EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFN---K--D-GGYIAYYKLAERFRDT--KGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHC---T--T-THHHHHHHHHHHHTTS--SEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCCccccCceeECCCCCCCCChHHCchhhcC---C--c-hHHHHHHHHHHhcccC--CEEEECCHHHHhHHHHHHHHh
Confidence 00000011 3346777 66555555544332 1 1 1233444455556666 789999999999987766541
Q ss_pred -----CCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccc-cCCHHHHHHHHHHHHhCCC
Q 041902 236 -----FNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTIC-VLEKRQVEEIARGLLDSGH 309 (470)
Q Consensus 236 -----~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~ 309 (470)
.++++|||+......+... .. + + .+.++.+|++.++++++|||||||.. ..+.+++..++.+|+..++
T Consensus 234 ~~~p~~~v~~vGpl~~~~~~~~~~---~~-~-~-~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~ 307 (463)
T 2acv_A 234 HDEKIPPIYAVGPLLDLKGQPNPK---LD-Q-A-QHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGV 307 (463)
T ss_dssp HCTTSCCEEECCCCCCSSCCCBTT---BC-H-H-HHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTC
T ss_pred ccccCCcEEEeCCCcccccccccc---cc-c-c-cchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCC
Confidence 3699999998652100000 00 0 1 23689999999888999999999999 7788889999999999999
Q ss_pred CEEEEEecCCCCCCCCCchhhhHHHHHHh--CCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeecccc
Q 041902 310 PFLWVIREHENKDKDKGEDDVVMKYKEEL--NEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW 387 (470)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~ 387 (470)
+|||+++.+ . . .+|+++.+++ ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++
T Consensus 308 ~~l~~~~~~-~-~------~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 308 RFLWSNSAE-K-K------VFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp EEEEECCCC-G-G------GSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred cEEEEECCC-c-c------cCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch
Confidence 999998753 1 1 4566776667 7899999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHH-HhhhcceeEe-eecCCC--CcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 041902 388 TDQGTNAKII-VDFCKTGVRV-KANEEG--ILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFV 463 (470)
Q Consensus 388 ~DQ~~nA~rl-~~~~GvG~~l-~~~~~~--~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (470)
.||+.||+++ ++ +|+|+.+ ...+.. .++.++|.++|+++|+++++||++|+++++++++++.++|++.+++++|+
T Consensus 380 ~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 458 (463)
T 2acv_A 380 AEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458 (463)
T ss_dssp TTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 9999999995 77 9999999 310014 68999999999999973479999999999999999999999999999999
Q ss_pred HHhh
Q 041902 464 DDFG 467 (470)
Q Consensus 464 ~~l~ 467 (470)
++|.
T Consensus 459 ~~~~ 462 (463)
T 2acv_A 459 DDIT 462 (463)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9873
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.5e-46 Score=376.09 Aligned_cols=397 Identities=16% Similarity=0.202 Sum_probs=270.9
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCC----CC
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNS----KQ 80 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~----~~ 80 (470)
+.++++|||+|++++++||++|+++||++|+++||+|+|++++.+.+.+ +. .|++|++++..++..... ..
T Consensus 7 ~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~~~~ 81 (424)
T 2iya_A 7 SASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQV-KA----AGATPVVYDSILPKESNPEESWPE 81 (424)
T ss_dssp ----CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HH----HTCEEEECCCCSCCTTCTTCCCCS
T ss_pred cCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHH-Hh----CCCEEEecCccccccccchhhcch
Confidence 3456678999999999999999999999999999999999999998888 76 799999998765543211 11
Q ss_pred CCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCc
Q 041902 81 NDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDL 160 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~ 160 (470)
+. ...+..+.........++.+.+++ .+||+||+|.+..++..+|+++|||++.+++.+...............+.
T Consensus 82 ~~-~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (424)
T 2iya_A 82 DQ-ESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPT 157 (424)
T ss_dssp SH-HHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCC
T ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccc
Confidence 21 233333444444455555555544 67999999988889999999999999999876541111100000000000
Q ss_pred cccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHH----------HHhccCCeEEEcchHhhhHHHH
Q 041902 161 IEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEA----------IVEETDPKILVNTFDALEAETL 230 (470)
Q Consensus 161 p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~l~~~~~ 230 (470)
... .. .+ .++............ ........+.+.+.... .... +.+++++.++++++..
T Consensus 158 ~~~---~~--~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~l~~~~~~l~~~~~ 226 (424)
T 2iya_A 158 ADR---GE--EA-AAPAGTGDAEEGAEA---EDGLVRFFTRLSAFLEEHGVDTPATEFLIAP--NRCIVALPRTFQIKGD 226 (424)
T ss_dssp C------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCC--SSEEESSCTTTSTTGG
T ss_pred ccc---cc--cc-ccccccccchhhhcc---chhHHHHHHHHHHHHHHcCCCCCHHHhccCC--CcEEEEcchhhCCCcc
Confidence 000 00 00 000000000000000 00001111111111111 1133 7889999999987532
Q ss_pred HHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCC
Q 041902 231 RAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHP 310 (470)
Q Consensus 231 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~ 310 (470)
. + ..++++|||++... ....+|++..+++++|||++||......+.+..++++++..+.+
T Consensus 227 ~-~-~~~~~~vGp~~~~~------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 227 T-V-GDNYTFVGPTYGDR------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp G-C-CTTEEECCCCCCCC------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred C-C-CCCEEEeCCCCCCc------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 2 2 24699999986531 11224676566778999999999865677888999999888888
Q ss_pred EEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchh
Q 041902 311 FLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQ 390 (470)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ 390 (470)
++|.++.+ ... +.+ +.+++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||
T Consensus 287 ~~~~~g~~-~~~---------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ 353 (424)
T 2iya_A 287 VVLSVGRF-VDP---------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQ 353 (424)
T ss_dssp EEEECCTT-SCG---------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHH
T ss_pred EEEEECCc-CCh---------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccch
Confidence 88888754 211 111 135789999999999999999998 99999999999999999999999999999
Q ss_pred hHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 041902 391 GTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFV 463 (470)
Q Consensus 391 ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (470)
+.||+++++ .|+|+.+.. .+++.++|.++|+++|+ |++|+++++++++++++ .++..+.++.+.
T Consensus 354 ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 417 (424)
T 2iya_A 354 TMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVAS-DPGVAERLAAVRQEIRE----AGGARAAADILE 417 (424)
T ss_dssp HHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT----SCHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh----cCcHHHHHHHHH
Confidence 999999998 999999986 67899999999999999 99999999999999875 244444444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.9e-44 Score=362.12 Aligned_cols=362 Identities=19% Similarity=0.185 Sum_probs=238.2
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCC-------CCCC-
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDD-------GFNS- 78 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~-------~~~~- 78 (470)
--+.|||||+++|+.||++|+++||++|++|||+|+|++++.+...+ + .|+.++++.+.... ....
T Consensus 19 ~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ 92 (400)
T 4amg_A 19 YFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E-----AGLCAVDVSPGVNYAKLFVPDDTDVT 92 (400)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T-----TTCEEEESSTTCCSHHHHSCCC----
T ss_pred CCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h-----cCCeeEecCCchhHhhhccccccccc
Confidence 34569999999999999999999999999999999999999887755 4 68899888543211 0000
Q ss_pred -----CCCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHh
Q 041902 79 -----KQNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYY 153 (470)
Q Consensus 79 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~ 153 (470)
...........+.......+.++++.+++ .+||+||+|.+.+++..+|+.+|||++.+.+++.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~- 168 (400)
T 4amg_A 93 DPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA- 168 (400)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH-
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh-
Confidence 01110112222333334444555555554 579999999999999999999999999875543211111000
Q ss_pred hhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHh---ccCCeEEEcchHhhhHHHH
Q 041902 154 FYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVE---ETDPKILVNTFDALEAETL 230 (470)
Q Consensus 154 ~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~l~~~~~ 230 (470)
...+.+.+......- ......+............
T Consensus 169 -------------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
T 4amg_A 169 -------------------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLP 205 (400)
T ss_dssp -------------------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSC
T ss_pred -------------------------------------------HHHHHHHHHHHHhCCCcccccchhhcccCchhhccCc
Confidence 000111111111100 0001122222221111000
Q ss_pred HHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCC--HHHHHHHHHHHHhCC
Q 041902 231 RAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLE--KRQVEEIARGLLDSG 308 (470)
Q Consensus 231 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~--~~~~~~~~~al~~~~ 308 (470)
........+..++.... .+..+.+|++..+++++||||+||+...+ .+.+..++.++...+
T Consensus 206 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 206 EDRRSPGAWPMRYVPYN-----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp GGGCCTTCEECCCCCCC-----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred ccccCCcccCccccccc-----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 00001112222222211 01233348888889999999999987543 356788999999999
Q ss_pred CCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccc
Q 041902 309 HPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWT 388 (470)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~ 388 (470)
..++|..+.. ... ... .+++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|++.
T Consensus 269 ~~~v~~~~~~-~~~------~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 269 AEFVLTLGGG-DLA------LLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp SEEEEECCTT-CCC------CCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC--
T ss_pred ceEEEEecCc-ccc------ccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcc
Confidence 9999988765 322 111 36799999999999999999998 999999999999999999999999999
Q ss_pred hhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHh
Q 041902 389 DQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDF 466 (470)
Q Consensus 389 DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l 466 (470)
||+.||+++++ +|+|+.++. .+.+.+ +|+++|+ |++||++|+++++++++. .+. ..+.+.++.|
T Consensus 335 dQ~~na~~v~~-~G~g~~l~~---~~~~~~----al~~lL~-d~~~r~~a~~l~~~~~~~----~~~-~~~a~~le~l 398 (400)
T 4amg_A 335 YQDTNRDVLTG-LGIGFDAEA---GSLGAE----QCRRLLD-DAGLREAALRVRQEMSEM----PPP-AETAAXLVAL 398 (400)
T ss_dssp -CHHHHHHHHH-HTSEEECCT---TTCSHH----HHHHHHH-CHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred cHHHHHHHHHH-CCCEEEcCC---CCchHH----HHHHHHc-CHHHHHHHHHHHHHHHcC----CCH-HHHHHHHHHh
Confidence 99999999998 999999986 566654 6688999 999999999999999852 333 4455566655
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.8e-43 Score=352.13 Aligned_cols=378 Identities=14% Similarity=0.150 Sum_probs=257.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEF 90 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+ +. .|++|++++...........+.....+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~----~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 75 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERL-AE----VGVPHVPVGPSARAPIQRAKPLTAEDVRRF 75 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HH----TTCCEEECCC-------CCSCCCHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHH-HH----cCCeeeeCCCCHHHHhhcccccchHHHHHH
Confidence 7999999999999999999999999999999999999988877 66 799999998654221111111112112111
Q ss_pred HHHhHHHHHHHHHhhhhcCCCCccEEEeCC-Cchh--HHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCccccccCC
Q 041902 91 KRRSSEALTEIITGSENQGAQPFTCLVYSL-LLPW--TAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEEKVND 167 (470)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~-~~~~--~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 167 (470)
+.....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.++++++.... .
T Consensus 76 ---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~---------~--------- 133 (415)
T 1iir_A 76 ---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS---------P--------- 133 (415)
T ss_dssp ---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------S---------
T ss_pred ---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC---------c---------
Confidence 1122233333333212 6799999997 5678 899999999999999876532100 0
Q ss_pred cccCCCCCCCCCCCCCCccCC-CCCCCchh----HHHHHHHHHHHHHHhc--c-----------CCeEEEcchHhhhH-H
Q 041902 168 LIELPGLPPLTGWDLPSFMDP-RKSNDAYS----FILTCFKEQMEAIVEE--T-----------DPKILVNTFDALEA-E 228 (470)
Q Consensus 168 ~~~~p~~~~~~~~~~~~~~~~-~~n~~~~~----~~~~~~~~~~~~~~~~--~-----------~~~~l~~~~~~l~~-~ 228 (470)
.+|.. ... + ....+ ..|..... .....+.+..+.+... . ...+++++.+++++ +
T Consensus 134 --~~p~~-~~~---~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 206 (415)
T 1iir_A 134 --YYPPP-PLG---E-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQ 206 (415)
T ss_dssp --SSCCC-C-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC
T ss_pred --ccCCc-cCC---c-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCCC
Confidence 01110 000 0 00000 00000000 0001111111111110 0 02468888888875 2
Q ss_pred HHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCC
Q 041902 229 TLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSG 308 (470)
Q Consensus 229 ~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 308 (470)
.. .++++++||+...... . .+.++.+|++.+ +++|||++||.. ...+.++.++++++..+
T Consensus 207 ~~----~~~~~~vG~~~~~~~~-----------~--~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 207 PT----DLDAVQTGAWILPDER-----------P--LSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp CC----SSCCEECCCCCCCCCC-----------C--CCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred cc----cCCeEeeCCCccCccc-----------C--CCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 11 2378999999865211 1 237889999764 468999999987 56677888999999999
Q ss_pred CCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccc
Q 041902 309 HPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWT 388 (470)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~ 388 (470)
.+++|+++.+ ... . ...++|+.+.+|+||.++|+.+++ ||||||+||++||+++|||+|++|...
T Consensus 267 ~~~v~~~g~~-~~~------~------~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 267 RRVILSRGWA-DLV------L------PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp CCEEECTTCT-TCC------C------SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CeEEEEeCCC-ccc------c------cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCC
Confidence 9999987755 211 0 134578999999999999988888 999999999999999999999999999
Q ss_pred hhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhhc
Q 041902 389 DQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFGT 468 (470)
Q Consensus 389 DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 468 (470)
||..||+++++ .|+|+.+.. .+++.++|.++|+++ . |++|+++++++++++++ ..+...+.++++++..
T Consensus 332 dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 332 DQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-L-TPETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp THHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-T-SHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-c-CHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 99999999998 999999986 678999999999999 8 99999999999998753 4455556666666543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.8e-42 Score=346.85 Aligned_cols=362 Identities=13% Similarity=0.095 Sum_probs=252.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCC-CCCCchhhHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNS-KQNDPRRYVSE 89 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 89 (470)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+ +. .|++|++++......... ..+.....+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERL-AE----VGVPHVPVGLPQHMMLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HH----HTCCEEECSCCGGGCCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHH-HH----cCCeeeecCCCHHHHHhhccccchhHHHHH
Confidence 7999999999999999999999999999999999999888888 66 899999998653221111 11110211222
Q ss_pred HHHHhHHHHHHHHHhhhhcCCCCccEEEeCC-Cchh--HHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCccccccC
Q 041902 90 FKRRSSEALTEIITGSENQGAQPFTCLVYSL-LLPW--TAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEEKVN 166 (470)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~-~~~~--~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 166 (470)
+.. ....++++.+.... .+||+||+|. +.++ +..+|+.+|||++.+++++..... .
T Consensus 76 ~~~---~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~---------~-------- 134 (416)
T 1rrv_A 76 LAA---MTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS---------P-------- 134 (416)
T ss_dssp HHH---HHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------S--------
T ss_pred HHH---HHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC---------c--------
Confidence 211 22233444443112 6799999996 4556 889999999999998776532100 0
Q ss_pred CcccCCCCCCCCCCCCCCc-cCCCCCCCchh----HHHHHHHHHHHHHHhc-------------cCCeEEEcchHhhhHH
Q 041902 167 DLIELPGLPPLTGWDLPSF-MDPRKSNDAYS----FILTCFKEQMEAIVEE-------------TDPKILVNTFDALEAE 228 (470)
Q Consensus 167 ~~~~~p~~~~~~~~~~~~~-~~~~~n~~~~~----~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~l~~~ 228 (470)
.+| |.+. + .. ..+..|...+. .....+.+..+.+... ....+++++.++++++
T Consensus 135 ---~~p--~~~~---~-~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~ 205 (416)
T 1rrv_A 135 ---HLP--PAYD---E-PTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPL 205 (416)
T ss_dssp ---SSC--CCBC---S-CCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCC
T ss_pred ---ccC--CCCC---C-CCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCCCeEEccCccccCC
Confidence 011 0000 0 00 00010110000 0001111111111100 0025788888888753
Q ss_pred HHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEeccccc-CCHHHHHHHHHHHHhC
Q 041902 229 TLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICV-LEKRQVEEIARGLLDS 307 (470)
Q Consensus 229 ~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~-~~~~~~~~~~~al~~~ 307 (470)
.. .++++++||+..+... . .+.++.+|++.+ +++|||++||... ...+.+..++++++..
T Consensus 206 ~~----~~~~~~vG~~~~~~~~-----------~--~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~ 266 (416)
T 1rrv_A 206 QP----DVDAVQTGAWLLSDER-----------P--LPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ 266 (416)
T ss_dssp CS----SCCCEECCCCCCCCCC-----------C--CCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHT
T ss_pred CC----CCCeeeECCCccCccC-----------C--CCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHC
Confidence 11 2378999999875211 1 237889999764 4689999999864 3456688899999999
Q ss_pred CCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeecccc
Q 041902 308 GHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW 387 (470)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~ 387 (470)
+.+++|+++.+ ... . +..++|+.+++|+||.++|+.+++ ||||||+||++||+++|||+|++|..
T Consensus 267 ~~~~v~~~g~~-~~~------~------~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 267 GRRVILSRGWT-ELV------L------PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp TCCEEEECTTT-TCC------C------SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCeEEEEeCCc-ccc------c------cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCC
Confidence 99999988755 211 0 135689999999999999988888 99999999999999999999999999
Q ss_pred chhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 041902 388 TDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLARE 447 (470)
Q Consensus 388 ~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~ 447 (470)
.||..||+++++ .|+|+.+.. .+++.++|.++|+++ . |++|+++++++++++++
T Consensus 332 ~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 332 TDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-L-APETRARAEAVAGMVLT 385 (416)
T ss_dssp BTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-T-SHHHHHHHHHHTTTCCC
T ss_pred CCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-h-CHHHHHHHHHHHHHHhh
Confidence 999999999998 999999975 678999999999999 8 99999999999988763
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6.8e-41 Score=338.11 Aligned_cols=379 Identities=16% Similarity=0.193 Sum_probs=265.4
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCC----CCC
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFN----SKQ 80 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~----~~~ 80 (470)
.+..++|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+ +. .|+.+.+++..++.... ...
T Consensus 15 ~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~-~~----~G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 15 IEGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPV-RA----AGATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp ----CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HH----TTCEEEECCCSTTTCCHHHHHHSS
T ss_pred cCcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHH-Hh----cCCEEEeccccccccccchhhccc
Confidence 4455568999999999999999999999999999999999999999988 77 89999999865443211 011
Q ss_pred CCchhhHHH-HHHHhHHHHHHHHHhhhhcCCCCccEEEeC-CCchhHHHHHHHcCCCeEEEechhhHHHHHHH--Hhhhc
Q 041902 81 NDPRRYVSE-FKRRSSEALTEIITGSENQGAQPFTCLVYS-LLLPWTAEVARAYHLPSALLWIQPALVFDVYY--YYFYG 156 (470)
Q Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d-~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~--~~~~~ 156 (470)
+. ...+.. +.......+.++.+.+++ .+||+||+| ...+++..+|+.+|||++.+.+.......... ....
T Consensus 90 ~~-~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~- 164 (415)
T 3rsc_A 90 DL-GVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVT- 164 (415)
T ss_dssp SS-CHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHH-
T ss_pred cH-HHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccccccccc-
Confidence 22 223333 444444555566666654 679999999 77788999999999999998643321000000 0000
Q ss_pred cCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHH---------HHhccCCeEEEcchHhhhH
Q 041902 157 YGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEA---------IVEETDPKILVNTFDALEA 227 (470)
Q Consensus 157 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~~l~~ 227 (470)
...+.. +. .+......+.+.... +.....+..+....+.+++
T Consensus 165 ------------~~~~~~--------p~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 215 (415)
T 3rsc_A 165 ------------LAGTID--------PL---------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI 215 (415)
T ss_dssp ------------HHTCCC--------GG---------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST
T ss_pred ------------ccccCC--------hh---------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC
Confidence 000000 00 001111111111111 0100015667777666665
Q ss_pred HHHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhC
Q 041902 228 ETLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDS 307 (470)
Q Consensus 228 ~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~ 307 (470)
+... + ..++.++||++... .+...|....+++++|||++||......+.+..+++++...
T Consensus 216 ~~~~-~-~~~~~~vGp~~~~~------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~ 275 (415)
T 3rsc_A 216 AGDT-F-DDRFVFVGPCFDDR------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQ 275 (415)
T ss_dssp TGGG-C-CTTEEECCCCCCCC------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTS
T ss_pred Cccc-C-CCceEEeCCCCCCc------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcC
Confidence 3211 1 23589999987651 12223555456778999999999876777889999999988
Q ss_pred CCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeecccc
Q 041902 308 GHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW 387 (470)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~ 387 (470)
+.+++|.++.+ .. .+.+. ..++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|..
T Consensus 276 ~~~~v~~~g~~-~~---------~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 342 (415)
T 3rsc_A 276 PWHVVMTLGGQ-VD---------PAALG-DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQS 342 (415)
T ss_dssp SCEEEEECTTT-SC---------GGGGC-CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCS
T ss_pred CcEEEEEeCCC-CC---------hHHhc-CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCc
Confidence 88888877654 11 11111 35789999999999999999999 99999999999999999999999999
Q ss_pred chhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 041902 388 TDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVD 464 (470)
Q Consensus 388 ~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (470)
.||+.||.++++ .|+|+.+.. .+++.+.|.++|+++|+ |++++++++++++.+.+ .++..+.++.+.+
T Consensus 343 ~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 343 FDVQPMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAA-DPALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp GGGHHHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred chHHHHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 999999999998 999999986 67899999999999999 99999999999999876 3444555544443
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=5.8e-41 Score=337.47 Aligned_cols=349 Identities=14% Similarity=0.131 Sum_probs=245.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCC-CCCCchhhHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNS-KQNDPRRYVSE 89 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 89 (470)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+ +. .|+.|++++......... .... ..+...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v-~~----~g~~~~~l~~~~~~~~~~~~~~~-~~~~~~ 74 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERC-AE----VGVPMVPVGRAVRAGAREPGELP-PGAAEV 74 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHH-HH----TTCCEEECSSCSSGGGSCTTCCC-TTCGGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHH-HH----cCCceeecCCCHHHHhccccCCH-HHHHHH
Confidence 8999999999999999999999999999999999999999998 77 899999997543311100 0111 112222
Q ss_pred HHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhH---HHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCccccccC
Q 041902 90 FKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWT---AEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEEKVN 166 (470)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~---~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 166 (470)
+.......++++.+.+ .+||+||+|..+..+ ..+|+.+|||++.+..++......
T Consensus 75 ~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~----------------- 132 (404)
T 3h4t_A 75 VTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE----------------- 132 (404)
T ss_dssp HHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG-----------------
T ss_pred HHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh-----------------
Confidence 2333334444444333 359999998665544 789999999999987765421000
Q ss_pred CcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhc-------------cCCeEEEcchHhhhHHHHHHh
Q 041902 167 DLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEE-------------TDPKILVNTFDALEAETLRAI 233 (470)
Q Consensus 167 ~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~l~~~~~~~~ 233 (470)
.. .... ........+.+.+..+..... ..+..+.+..+.+.+.. .+
T Consensus 133 ------~~---------~~~~----~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~-~~- 191 (404)
T 3h4t_A 133 ------QS---------QAER----DMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR-PT- 191 (404)
T ss_dssp ------SC---------HHHH----HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC-TT-
T ss_pred ------hH---------HHHH----HHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC-CC-
Confidence 00 0000 000000011111111111100 00223344444443321 01
Q ss_pred cCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 041902 234 DKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLW 313 (470)
Q Consensus 234 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 313 (470)
..++.++|+++.+... + .++++.+|++. ++++|||++||+.. ..+.+..+++++...+.+++|
T Consensus 192 -~~~~~~~G~~~~~~~~------------~-~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~ 254 (404)
T 3h4t_A 192 -DLGTVQTGAWILPDQR------------P-LSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVL 254 (404)
T ss_dssp -CCSCCBCCCCCCCCCC------------C-CCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEE
T ss_pred -CCCeEEeCccccCCCC------------C-CCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEE
Confidence 2357788877654211 1 33788999875 45799999999986 557788999999999999999
Q ss_pred EEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHH
Q 041902 314 VIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTN 393 (470)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~n 393 (470)
..+.. ... .. ..++|+.+++|+||.++|+++++ ||||||+||++||+++|+|+|++|+..||+.|
T Consensus 255 ~~g~~-~~~------~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~n 319 (404)
T 3h4t_A 255 SSGWA-GLG------RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYY 319 (404)
T ss_dssp ECTTT-TCC------CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EeCCc-ccc------cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHH
Confidence 87755 322 11 24689999999999999999888 99999999999999999999999999999999
Q ss_pred HHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 041902 394 AKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAR 446 (470)
Q Consensus 394 A~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~ 446 (470)
|+++++ .|+|..+.. .+++.+.|.++|+++|+ ++|+++++++++.++
T Consensus 320 a~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 320 AGRVAD-LGVGVAHDG---PTPTVESLSAALATALT--PGIRARAAAVAGTIR 366 (404)
T ss_dssp HHHHHH-HTSEEECSS---SSCCHHHHHHHHHHHTS--HHHHHHHHHHHTTCC
T ss_pred HHHHHH-CCCEeccCc---CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHh
Confidence 999998 999999986 67899999999999998 789999999998875
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=9.4e-40 Score=327.99 Aligned_cols=375 Identities=17% Similarity=0.223 Sum_probs=262.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCC----CCCCchh
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNS----KQNDPRR 85 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~----~~~~~~~ 85 (470)
.|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+ +. .|+.+.+++..++..... ..+. ..
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~----~G~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEV-KA----AGAEVVLYKSEFDTFHVPEVVKQEDA-ET 77 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH-HH----TTCEEEECCCGGGTSSSSSSSCCTTH-HH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHH-HH----cCCEEEecccccccccccccccccch-HH
Confidence 35999999999999999999999999999999999999998888 77 899999997544322111 1122 33
Q ss_pred hHHH-HHHHhHHHHHHHHHhhhhcCCCCccEEEeC-CCchhHHHHHHHcCCCeEEEechhhHHHHHHH--HhhhccCCcc
Q 041902 86 YVSE-FKRRSSEALTEIITGSENQGAQPFTCLVYS-LLLPWTAEVARAYHLPSALLWIQPALVFDVYY--YYFYGYGDLI 161 (470)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d-~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~--~~~~~~~~~p 161 (470)
.+.. +.......+.++.+.+++ .+||+||+| .+..++..+|+.+|||++.+.+.......... ....
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~------ 148 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWK------ 148 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccc------
Confidence 3333 444444555566666655 679999999 77788999999999999988643321000000 0000
Q ss_pred ccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHH---------HHHhccCCeEEEcchHhhhHHHHHH
Q 041902 162 EEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQME---------AIVEETDPKILVNTFDALEAETLRA 232 (470)
Q Consensus 162 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~~l~~~~~~~ 232 (470)
...... +. .+......+.+... .+.....+..+.....++++... .
T Consensus 149 -------~~~~~~--------~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~ 203 (402)
T 3ia7_A 149 -------SNGQRH--------PA---------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAE-T 203 (402)
T ss_dssp -------HHTCCC--------GG---------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGG-G
T ss_pred -------cccccC--------hh---------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccc-c
Confidence 000000 00 00001111111111 00110015566666666665321 1
Q ss_pred hcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Q 041902 233 IDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFL 312 (470)
Q Consensus 233 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 312 (470)
+ ..++.++||++... .....|....+++++|||++||......+.+..+++++...+.+++
T Consensus 204 ~-~~~~~~vGp~~~~~------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 204 F-DERFAFVGPTLTGR------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp C-CTTEEECCCCCCC----------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred C-CCCeEEeCCCCCCc------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 1 23599999987641 1222355545677899999999987777788999999998887888
Q ss_pred EEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccc-cchhh
Q 041902 313 WVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQ-WTDQG 391 (470)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~-~~DQ~ 391 (470)
+.++.+ .. .+.+. ..++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|. ..||.
T Consensus 265 ~~~g~~-~~---------~~~~~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~ 331 (402)
T 3ia7_A 265 MAIGGF-LD---------PAVLG-PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAA 331 (402)
T ss_dssp EECCTT-SC---------GGGGC-SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGH
T ss_pred EEeCCc-CC---------hhhhC-CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHH
Confidence 877654 11 11111 35789999999999999999999 9999999999999999999999999 99999
Q ss_pred HHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 041902 392 TNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDD 465 (470)
Q Consensus 392 ~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
.||.++++ .|+|..+.. ++++.+.|.++++++|+ |++++++++++++++.+ .++..+.++.+.+.
T Consensus 332 ~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 396 (402)
T 3ia7_A 332 PSAERVIE-LGLGSVLRP---DQLEPASIREAVERLAA-DSAVRERVRRMQRDILS----SGGPARAADEVEAY 396 (402)
T ss_dssp HHHHHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHhh----CChHHHHHHHHHHH
Confidence 99999998 999999986 67899999999999999 99999999999998864 34444544444433
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.1e-39 Score=332.11 Aligned_cols=374 Identities=14% Similarity=0.165 Sum_probs=246.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCC--CC-----------
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYD--DG----------- 75 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~--~~----------- 75 (470)
..|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+ +. .|++|++++.... ..
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v-~~----~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDI-TA----AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHH-HT----TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHH-Hh----CCCceeecCCccchHHHhhhhhcccccc
Confidence 458999999999999999999999999999999999999988888 77 8999999986431 00
Q ss_pred ---CCC----CC-CCchhhH----HHHHHHhH-----H-HHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeE
Q 041902 76 ---FNS----KQ-NDPRRYV----SEFKRRSS-----E-ALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSA 137 (470)
Q Consensus 76 ---~~~----~~-~~~~~~~----~~~~~~~~-----~-~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i 137 (470)
... .. .. ...+ ..+..... . .+.++++.+++ .+||+||+|.++.++..+|+.+|||++
T Consensus 94 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 94 VRSLDFSERDPATLT-WEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HTTCCCTTCCGGGGS-HHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccCcchhh-hhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCCCEE
Confidence 000 00 01 1111 11111101 2 55666665554 579999999877889999999999999
Q ss_pred EEechhhHHHHHHHHhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHh-c----
Q 041902 138 LLWIQPALVFDVYYYYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVE-E---- 212 (470)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~---- 212 (470)
.+...+............ . ....|.. . ......+.+.+....+.. .
T Consensus 170 ~~~~~~~~~~~~~~~~~~----~-------~~~~~~~-------------~-----~~~~~~~~l~~~~~~~g~~~~~~~ 220 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLG----L-------LPDQPEE-------------H-----REDPLAEWLTWTLEKYGGPAFDEE 220 (441)
T ss_dssp EECSSCCHHHHHHHHHHH----H-------GGGSCTT-------------T-----CCCHHHHHHHHHHHHTTCCCCCGG
T ss_pred EEecCCCcchhhhhhhhh----h-------ccccccc-------------c-----ccchHHHHHHHHHHHcCCCCCCcc
Confidence 986554321111110100 0 0001100 0 000111222222221111 0
Q ss_pred --cCCeEEEcchHhhhHHHHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccc
Q 041902 213 --TDPKILVNTFDALEAETLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTIC 290 (470)
Q Consensus 213 --~~~~~l~~~~~~l~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~ 290 (470)
..+.++.++.+.++++. +++...+++.... .+.++.+|++..+++++|||++||..
T Consensus 221 ~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 221 VVVGQWTIDPAPAAIRLDT-----GLKTVGMRYVDYN-----------------GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp GTSCSSEEECSCGGGSCCC-----CCCEEECCCCCCC-----------------SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred ccCCCeEEEecCccccCCC-----CCCCCceeeeCCC-----------------CCcccchHhhcCCCCCEEEEECCCCc
Confidence 01445555544444210 1111122222111 01334568876667889999999987
Q ss_pred cC---CHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccC
Q 041902 291 VL---EKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCG 367 (470)
Q Consensus 291 ~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG 367 (470)
.. ..+.+..+++++...+.+++|+.+.. ... .+. .+++|+++.+|+||.++|+.+++ ||||||
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~-~~~------~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G 344 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQ-QLE------GVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGG 344 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTT-TTS------SCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCC
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCc-chh------hhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCC
Confidence 53 23557778899988888888877644 222 221 24689999999999999988888 999999
Q ss_pred chhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 041902 368 WNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLARE 447 (470)
Q Consensus 368 ~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~ 447 (470)
.||++||+++|||+|++|...||..||+++++ .|+|+.+.. .+++.+.|.++|+++|+ |++|+++++++++++++
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLD-DPAHRAGAARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999998 999999986 67899999999999999 99999999999999875
Q ss_pred HHhcCCCcHHHHHHHHHHh
Q 041902 448 AAKQGGSSYKNLKAFVDDF 466 (470)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~l 466 (470)
..+ ...+.+.|+.+
T Consensus 420 ----~~~-~~~~~~~i~~~ 433 (441)
T 2yjn_A 420 ----EPS-PAEVVGICEEL 433 (441)
T ss_dssp ----SCC-HHHHHHHHHHH
T ss_pred ----CCC-HHHHHHHHHHH
Confidence 234 44444455544
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-38 Score=322.40 Aligned_cols=375 Identities=17% Similarity=0.190 Sum_probs=256.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCC----CCCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSK----QNDP 83 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~----~~~~ 83 (470)
+..|||+|++.++.||++|++.|+++|+++||+|++++++...+.+ +. .|+++++++..++...... .+.
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~~~~~~- 78 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKV-AA----TGPRPVLYHSTLPGPDADPEAWGSTL- 78 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HT----TSCEEEECCCCSCCTTSCGGGGCSSH-
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHH-Hh----CCCEEEEcCCcCccccccccccchhh-
Confidence 3457999999999999999999999999999999999999887777 66 8999999986544322110 111
Q ss_pred hhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCcccc
Q 041902 84 RRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEE 163 (470)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 163 (470)
...+..+...+......+.+.+++ .+||+||+|.+.+++..+|+.+|||++.+++.+................ .
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~--~- 152 (430)
T 2iyf_A 79 LDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR--E- 152 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH--H-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh--h-
Confidence 222333333334445555555554 6799999998777899999999999999876542100000000000000 0
Q ss_pred ccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHH----------HHHhccCCeEEEcchHhhhHHHHHHh
Q 041902 164 KVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQME----------AIVEETDPKILVNTFDALEAETLRAI 233 (470)
Q Consensus 164 ~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~l~~~~~~~~ 233 (470)
....++ .......+.+... ..... +.+++++.+.+++.. ..+
T Consensus 153 ----~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~l~~~~~~~~~~~-~~~ 204 (430)
T 2iyf_A 153 ----PRQTER---------------------GRAYYARFEAWLKENGITEHPDTFASHP--PRSLVLIPKALQPHA-DRV 204 (430)
T ss_dssp ----HHHSHH---------------------HHHHHHHHHHHHHHTTCCSCHHHHHHCC--SSEEECSCGGGSTTG-GGS
T ss_pred ----hccchH---------------------HHHHHHHHHHHHHHhCCCCCHHHHhcCC--CcEEEeCcHHhCCCc-ccC
Confidence 000000 0000011111111 11134 788999988887642 122
Q ss_pred cCCC-eeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhC-CCCE
Q 041902 234 DKFN-MIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDS-GHPF 311 (470)
Q Consensus 234 ~~~~-~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~ 311 (470)
..+ ++++||.+.... ...+|.+..+++++|||++||......+.+..+++++... +.++
T Consensus 205 -~~~~v~~vG~~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~ 265 (430)
T 2iyf_A 205 -DEDVYTFVGACQGDRA------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHL 265 (430)
T ss_dssp -CTTTEEECCCCC-----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEE
T ss_pred -CCccEEEeCCcCCCCC------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEE
Confidence 235 999998764310 0112554445678999999998854567788899999875 7788
Q ss_pred EEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhh
Q 041902 312 LWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQG 391 (470)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~ 391 (470)
+|+++.+ ... +.+ +.+++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||.
T Consensus 266 ~~~~G~~-~~~---------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~ 332 (430)
T 2iyf_A 266 VLQIGRK-VTP---------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQF 332 (430)
T ss_dssp EEECC----CG---------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred EEEeCCC-CCh---------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchH
Confidence 8877755 211 111 135689999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 041902 392 TNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFV 463 (470)
Q Consensus 392 ~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (470)
.||.++++ .|+|+.+.. .+++.++|.++|+++++ |+++++++.++++++.+. ++..+.++.+.
T Consensus 333 ~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 395 (430)
T 2iyf_A 333 GNADMLQG-LGVARKLAT---EEATADLLRETALALVD-DPEVARRLRRIQAEMAQE----GGTRRAADLIE 395 (430)
T ss_dssp HHHHHHHH-TTSEEECCC---C-CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH----CHHHHHHHHHH
T ss_pred HHHHHHHH-cCCEEEcCC---CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhc----CcHHHHHHHHH
Confidence 99999998 999999986 67899999999999999 999999999999988763 44444444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=7e-38 Score=312.84 Aligned_cols=355 Identities=12% Similarity=0.064 Sum_probs=249.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCC-CC-------CCCCCCC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYD-DG-------FNSKQND 82 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~-~~-------~~~~~~~ 82 (470)
|||+|++.++.||++|+++||++|+++||+|++++++...+.+ +. .|+.+++++.... .. .....+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVV-TG----VGLPAVATTDLPIRHFITTDREGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HH----TTCCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHH-Hh----CCCEEEEeCCcchHHHHhhhcccCccccCc
Confidence 7999999999999999999999999999999999999887777 66 7999999875420 00 0000001
Q ss_pred chhhH----HH-HHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhcc
Q 041902 83 PRRYV----SE-FKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGY 157 (470)
Q Consensus 83 ~~~~~----~~-~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~ 157 (470)
..... .. +.......+.++.+.+++ .+||+||+|.+..++..+|+.+|||++.++..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------------ 140 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------------ 140 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC------------
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc------------
Confidence 00111 11 122223345555555554 56999999987778899999999999987532110
Q ss_pred CCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHH-----hccCCeEEEcchHhhhHHHHHH
Q 041902 158 GDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIV-----EETDPKILVNTFDALEAETLRA 232 (470)
Q Consensus 158 ~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~~~~~~ 232 (470)
+ . . ........+.+...... .. +.++.++.+.++++. .
T Consensus 141 --------------~-------~-----------~-~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~-~- 183 (384)
T 2p6p_A 141 --------------A-------D-----------G-IHPGADAELRPELSELGLERLPAP--DLFIDICPPSLRPAN-A- 183 (384)
T ss_dssp --------------C-------T-----------T-THHHHHHHTHHHHHHTTCSSCCCC--SEEEECSCGGGSCTT-S-
T ss_pred --------------c-------c-----------h-hhHHHHHHHHHHHHHcCCCCCCCC--CeEEEECCHHHCCCC-C-
Confidence 0 0 0 00001111111111110 03 678888888777431 0
Q ss_pred hcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccC-----CHHHHHHHHHHHHhC
Q 041902 233 IDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVL-----EKRQVEEIARGLLDS 307 (470)
Q Consensus 233 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~-----~~~~~~~~~~al~~~ 307 (470)
.+..++.++++ .. . .++.+|++..+++++|||++||.... ..+.+..+++++...
T Consensus 184 ~~~~~~~~~~~---~~----------------~-~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~ 243 (384)
T 2p6p_A 184 APARMMRHVAT---SR----------------Q-CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW 243 (384)
T ss_dssp CCCEECCCCCC---CC----------------C-CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT
T ss_pred CCCCceEecCC---CC----------------C-CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC
Confidence 00112333321 10 0 23345777656678999999998854 346788899999988
Q ss_pred CCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeecccc
Q 041902 308 GHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW 387 (470)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~ 387 (470)
+.+++|+.+.. . .+.+. .+++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 244 ~~~~~~~~g~~----------~-~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 244 DVELIVAAPDT----------V-AEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp TCEEEEECCHH----------H-HHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred CcEEEEEeCCC----------C-HHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 88888876532 1 12222 46889999 99999999999888 99999999999999999999999999
Q ss_pred chhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhh
Q 041902 388 TDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFG 467 (470)
Q Consensus 388 ~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 467 (470)
.||..||.++++ .|+|+.+.. ..++.++|.++|+++|+ |++++++++++++++++ ... .+.+.+.++.|.
T Consensus 309 ~dq~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 378 (384)
T 2p6p_A 309 SVLEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQA-KDTYARRAQDLSREISG----MPL-PATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT----SCC-HHHHHHHHHHHH
T ss_pred ccchHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh----CCC-HHHHHHHHHHHh
Confidence 999999999998 999999986 67899999999999999 99999999999999985 244 444445555543
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.6e-37 Score=310.27 Aligned_cols=349 Identities=15% Similarity=0.131 Sum_probs=225.5
Q ss_pred ccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCC--------CC
Q 041902 4 EQHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYD--------DG 75 (470)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~--------~~ 75 (470)
+...+.+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+ +. .|+.+++++.... ..
T Consensus 9 ~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~----~G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 9 GVPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTV-TG----AGLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp ------CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHH-HH----TTCCEEEEESSCCHHHHHSBCTT
T ss_pred CCCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHH-Hh----CCCeeEecCCccchHhhhhhhcc
Confidence 34556679999999999999999999999999999999999999988888 77 8999998863211 00
Q ss_pred CCC---CCCC---chhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHH
Q 041902 76 FNS---KQND---PRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDV 149 (470)
Q Consensus 76 ~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~ 149 (470)
... ..+. .......+.......+.++.+.+++ .+||+|++|...+++..+|+.+|||++.+..........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 000 0000 0111122223333444555555555 579999999877889999999999999875432110000
Q ss_pred HHHhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHH-----HhccCCeEEEcchHh
Q 041902 150 YYYYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAI-----VEETDPKILVNTFDA 224 (470)
Q Consensus 150 ~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~ 224 (470)
.....+.+.+....+ ... +..+....+.
T Consensus 161 ---------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~ 193 (398)
T 4fzr_A 161 ---------------------------------------------KSAGVGELAPELAELGLTDFPDP--LLSIDVCPPS 193 (398)
T ss_dssp ---------------------------------------------HHHHHHHTHHHHHTTTCSSCCCC--SEEEECSCGG
T ss_pred ---------------------------------------------hHHHHHHHHHHHHHcCCCCCCCC--CeEEEeCChh
Confidence 000001111111110 011 3445555555
Q ss_pred hhHHHHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCC--------HHH
Q 041902 225 LEAETLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLE--------KRQ 296 (470)
Q Consensus 225 l~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~--------~~~ 296 (470)
+..... ....++.|+++.... ..+..|+...+++++|||++||..... .+.
T Consensus 194 ~~~~~~--~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 252 (398)
T 4fzr_A 194 MEAQPK--PGTTKMRYVPYNGRN-------------------DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSL 252 (398)
T ss_dssp GC------CCCEECCCCCCCCSS-------------------CCCCHHHHSCCSSCEEECC----------------CCS
T ss_pred hCCCCC--CCCCCeeeeCCCCCC-------------------CCCchhhhcCCCCCEEEEEccCcccccccccccchHHH
Confidence 543210 001112222211000 223346665567789999999986432 345
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhh
Q 041902 297 VEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLV 376 (470)
Q Consensus 297 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~ 376 (470)
+..+++++...+.+++|+.+.. .. +.+. .+++|+.+.+|+|+.++|+++++ ||||||.||++||++
T Consensus 253 ~~~~~~al~~~~~~~v~~~~~~-~~----------~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~ 318 (398)
T 4fzr_A 253 LQALSQELPKLGFEVVVAVSDK-LA----------QTLQ-PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLS 318 (398)
T ss_dssp HHHHHHHGGGGTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCc-ch----------hhhc-cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHH
Confidence 8889999988888888866543 21 1221 46799999999999999999999 999999999999999
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLARE 447 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~ 447 (470)
+|+|+|++|...||..||.++++ .|+|+.+.. .+++.+.|.++|+++|+ |+++++++++.++++.+
T Consensus 319 ~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 319 EGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRD-DSSYVGNARRLAAEMAT 384 (398)
T ss_dssp TTCCEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHH-CTHHHHHHHHHHHHHTT
T ss_pred hCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHc
Confidence 99999999999999999999998 999999986 67899999999999999 99999999999998864
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.1e-36 Score=303.75 Aligned_cols=352 Identities=14% Similarity=0.134 Sum_probs=242.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCC------------
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGF------------ 76 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~------------ 76 (470)
+.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.+ +. .|+.+++++.......
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~-~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRA-AA----AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHH-HT----TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHH-Hh----CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 44899999999999999999999999999999999999 888888 77 8999999985311000
Q ss_pred ------CCCCCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHHH
Q 041902 77 ------NSKQNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDVY 150 (470)
Q Consensus 77 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~ 150 (470)
...... ......+.......+.++.+.+++ ++||+||+|...+++..+|+.+|||++.+........
T Consensus 93 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~--- 165 (398)
T 3oti_A 93 AETVATRPAIDL-EEWGVQIAAVNRPLVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR--- 165 (398)
T ss_dssp HHTGGGSCCCSG-GGGHHHHHHHHGGGHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT---
T ss_pred cccccCChhhhH-HHHHHHHHHHHHHHHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc---
Confidence 000111 223333333333444455555554 5699999998888899999999999998653311000
Q ss_pred HHhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHH----HhccCCeEEEcchHhhh
Q 041902 151 YYYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAI----VEETDPKILVNTFDALE 226 (470)
Q Consensus 151 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~l~ 226 (470)
.........+.+..... ... +..+....+.+.
T Consensus 166 ------------------------------------------~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~ 201 (398)
T 3oti_A 166 ------------------------------------------GMHRSIASFLTDLMDKHQVSLPEP--VATIESFPPSLL 201 (398)
T ss_dssp ------------------------------------------THHHHHHTTCHHHHHHTTCCCCCC--SEEECSSCGGGG
T ss_pred ------------------------------------------chhhHHHHHHHHHHHHcCCCCCCC--CeEEEeCCHHHC
Confidence 00000000001111110 111 344444444444
Q ss_pred HHHHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccC--CHHHHHHHHHHH
Q 041902 227 AETLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVL--EKRQVEEIARGL 304 (470)
Q Consensus 227 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~--~~~~~~~~~~al 304 (470)
.+.. ....++.|+. . . .+..+.+|+...+++++|||++||.... ..+.+..+++++
T Consensus 202 ~~~~--~~~~~~~~~~-~--~-----------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l 259 (398)
T 3oti_A 202 LEAE--PEGWFMRWVP-Y--G-----------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAA 259 (398)
T ss_dssp TTSC--CCSBCCCCCC-C--C-----------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHH
T ss_pred CCCC--CCCCCccccC-C--C-----------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHH
Confidence 2100 0011122211 0 0 0022234666556788999999998643 456788899999
Q ss_pred HhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEeec
Q 041902 305 LDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAF 384 (470)
Q Consensus 305 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~ 384 (470)
...+.+++|+.+.. ... .+. .+++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++
T Consensus 260 ~~~~~~~v~~~g~~-~~~------~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 260 GEVDADFVLALGDL-DIS------PLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp HTSSSEEEEECTTS-CCG------GGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HcCCCEEEEEECCc-Chh------hhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEc
Confidence 98888888877654 211 221 35789999999999999999998 99999999999999999999999
Q ss_pred cccchhhHHH--HHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 041902 385 PQWTDQGTNA--KIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAF 462 (470)
Q Consensus 385 P~~~DQ~~nA--~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~ 462 (470)
|...||..|| .++++ .|+|+.+.. .+.+.+.|. ++|+ |++++++++++++++.+ ..+...+.+.
T Consensus 326 p~~~dq~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 391 (398)
T 3oti_A 326 PDPRDQFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIG-DESLRTAAREVREEMVA-----LPTPAETVRR 391 (398)
T ss_dssp CCTTCCSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHH-CHHHHHHHHHHHHHHHT-----SCCHHHHHHH
T ss_pred CCCchhHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHc-CHHHHHHHHHHHHHHHh-----CCCHHHHHHH
Confidence 9999999999 99998 999999986 667888776 8999 99999999999999875 4445555556
Q ss_pred HHHhh
Q 041902 463 VDDFG 467 (470)
Q Consensus 463 ~~~l~ 467 (470)
++.+.
T Consensus 392 l~~l~ 396 (398)
T 3oti_A 392 IVERI 396 (398)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.8e-34 Score=288.78 Aligned_cols=360 Identities=14% Similarity=0.158 Sum_probs=237.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEc-CCCCCCCCC-----C-C---
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASF-SDGYDDGFN-----S-K--- 79 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i-~~~~~~~~~-----~-~--- 79 (470)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+ +. .|+.++++ ......... . .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATA-HG----AGLTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHH-HH----BTCEEEEC--------------CCSCCGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHH-Hh----CCCceeeecCCccchhhhhhhcccccccc
Confidence 59999999999999999999999999999999999999888888 76 89999998 432110000 0 0
Q ss_pred ---CCCchhhHHHHHHHhHHH-------HHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHHHH
Q 041902 80 ---QNDPRRYVSEFKRRSSEA-------LTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVFDV 149 (470)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~ 149 (470)
... ......+....... +.++.+.+++ .+||+|++|...+++..+|+.+|||++.+.......
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 148 (391)
T 3tsa_A 76 FGQRDT-EAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT--- 148 (391)
T ss_dssp GGCTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT---
T ss_pred cccccc-hhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc---
Confidence 000 11111222222222 5555555555 579999999877788999999999999864322100
Q ss_pred HHHhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhc---cCCeEEEcchHhhh
Q 041902 150 YYYYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEE---TDPKILVNTFDALE 226 (470)
Q Consensus 150 ~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~l~ 226 (470)
. ..........+.+....+... ..+.++..+.++++
T Consensus 149 ---------------------------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (391)
T 3tsa_A 149 ---------------------------------A--------GPFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQ 187 (391)
T ss_dssp ---------------------------------T--------THHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGS
T ss_pred ---------------------------------c--------ccccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhc
Confidence 0 000111111122222211100 00344554444444
Q ss_pred HHHHHHhcCCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEeccccc--CC-HHHHHHHHHH
Q 041902 227 AETLRAIDKFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICV--LE-KRQVEEIARG 303 (470)
Q Consensus 227 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~--~~-~~~~~~~~~a 303 (470)
..... ...++.|+ |.... ..+..|+...+++++|||++||... .. .+.+..++++
T Consensus 188 ~~~~~--~~~~~~~~-p~~~~-------------------~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 188 ASDAP--QGAPVQYV-PYNGS-------------------GAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp CTTSC--CCEECCCC-CCCCC-------------------EECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred CCCCC--ccCCeeee-cCCCC-------------------cCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 21100 00112222 11000 2233466655678899999999853 23 5678888888
Q ss_pred HHhC-CCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhhhcCCcEe
Q 041902 304 LLDS-GHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVV 382 (470)
Q Consensus 304 l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v 382 (470)
... +.+++|+.+.. ... .+. ..++|+.+.+|+|+.++|+.|++ ||||||.||++||+++|+|+|
T Consensus 246 -~~~p~~~~v~~~~~~-~~~------~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPE-HRA------LLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp -HTSTTEEEEEECCGG-GGG------GCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred -ccCCCeEEEEEECCc-chh------hcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 776 66777765543 111 111 35789999999999999988888 999999999999999999999
Q ss_pred eccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 041902 383 AFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAF 462 (470)
Q Consensus 383 ~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~ 462 (470)
++|...||+.|+.++++ .|+|+.+..++ .+.+.+.|.++++++|+ |++++++++++++.+.+ ..+. ..+.+.
T Consensus 311 ~~p~~~~q~~~a~~~~~-~g~g~~~~~~~-~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~----~~~~-~~~~~~ 382 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAA-AGAGICLPDEQ-AQSDHEQFTDSIATVLG-DTGFAAAAIKLSDEITA----MPHP-AALVRT 382 (391)
T ss_dssp ECCCSTTHHHHHHHHHH-TTSEEECCSHH-HHTCHHHHHHHHHHHHT-CTHHHHHHHHHHHHHHT----SCCH-HHHHHH
T ss_pred ecCCcccHHHHHHHHHH-cCCEEecCccc-ccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHc----CCCH-HHHHHH
Confidence 99999999999999998 99999987300 24789999999999999 99999999999998864 3444 445555
Q ss_pred HHHhh
Q 041902 463 VDDFG 467 (470)
Q Consensus 463 ~~~l~ 467 (470)
++.+.
T Consensus 383 i~~~~ 387 (391)
T 3tsa_A 383 LENTA 387 (391)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 55543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.5e-33 Score=280.42 Aligned_cols=362 Identities=16% Similarity=0.133 Sum_probs=246.4
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCC------------C
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDG------------Y 72 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~------------~ 72 (470)
.....+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+ +. .|+.++.++.. .
T Consensus 15 ~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 15 HIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTL-RK----LGFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp ---CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HH----TTCEEEECCCCHHHHHHHHHHHHH
T ss_pred CcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHH-Hh----cCCceeecCcccccchhhhhhhhh
Confidence 3455679999999999999999999999999999999999999887777 66 89999999841 0
Q ss_pred CCCCC--CC--CCCchhhHHHHHHH-hHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhHHH
Q 041902 73 DDGFN--SK--QNDPRRYVSEFKRR-SSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPALVF 147 (470)
Q Consensus 73 ~~~~~--~~--~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~~~ 147 (470)
..... .. ... ......+... ....+.++.+.+++ .+||+||+|....++..+|+.+|||++.........
T Consensus 90 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~- 164 (412)
T 3otg_A 90 DTDSPEGLTPEQLS-ELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP- 164 (412)
T ss_dssp SCSCCTTCCHHHHT-TSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-
T ss_pred cccCCccCChhHhh-HHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-
Confidence 00000 00 000 1112222222 22233444444444 569999999777778899999999999864321100
Q ss_pred HHHHHhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHH----------HHhccCCeE
Q 041902 148 DVYYYYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEA----------IVEETDPKI 217 (470)
Q Consensus 148 ~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 217 (470)
..........+.+.... .... +.+
T Consensus 165 --------------------------------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--d~~ 198 (412)
T 3otg_A 165 --------------------------------------------DDLTRSIEEEVRGLAQRLGLDLPPGRIDGFG--NPF 198 (412)
T ss_dssp --------------------------------------------SHHHHHHHHHHHHHHHHTTCCCCSSCCGGGG--CCE
T ss_pred --------------------------------------------hhhhHHHHHHHHHHHHHcCCCCCcccccCCC--CeE
Confidence 00000111111111111 1223 567
Q ss_pred EEcchHhhhHHHHHHhc-CCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHh-hccCCCCceEEEEecccccCCHH
Q 041902 218 LVNTFDALEAETLRAID-KFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEW-LSSKPKSSVIYVAFGTICVLEKR 295 (470)
Q Consensus 218 l~~~~~~l~~~~~~~~~-~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vV~vs~GS~~~~~~~ 295 (470)
+..+...++........ ..++.++++... .....| ....+++++||+++||......+
T Consensus 199 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~ 258 (412)
T 3otg_A 199 IDIFPPSLQEPEFRARPRRHELRPVPFAEQ--------------------GDLPAWLSSRDTARPLVYLTLGTSSGGTVE 258 (412)
T ss_dssp EECSCGGGSCHHHHTCTTEEECCCCCCCCC--------------------CCCCGGGGGSCTTSCEEEEECTTTTCSCHH
T ss_pred EeeCCHHhcCCcccCCCCcceeeccCCCCC--------------------CCCCCccccccCCCCEEEEEcCCCCcCcHH
Confidence 77666666543211110 111222221100 112235 23345678999999999755677
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccccceeccCchhhhhhh
Q 041902 296 QVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGCFVTHCGWNSSLESL 375 (470)
Q Consensus 296 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal 375 (470)
.+..++.++...+.+++|+.+.+ .... .+. .+++|+.+.+|+|+..+|+++++ ||+|||.+|++||+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~g~~-~~~~-----~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~ 325 (412)
T 3otg_A 259 VLRAAIDGLAGLDADVLVASGPS-LDVS-----GLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGAL 325 (412)
T ss_dssp HHHHHHHHHHTSSSEEEEECCSS-CCCT-----TCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCC-CChh-----hhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHH
Confidence 88889999998888888887755 2110 221 35689999999999999999999 99999999999999
Q ss_pred hcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCc
Q 041902 376 VCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSS 455 (470)
Q Consensus 376 ~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~ 455 (470)
++|+|+|++|...||..|+.++++ .|+|..+.. .+++.++|.+++.++|+ |+++++++.+.++++.+ ..+.
T Consensus 326 a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~----~~~~ 396 (412)
T 3otg_A 326 GAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLA-EESYRAGARAVAAEIAA----MPGP 396 (412)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHH----SCCH
T ss_pred HhCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhc----CCCH
Confidence 999999999999999999999998 999999987 67899999999999999 99999999999988875 3444
Q ss_pred HHHHHHHHH
Q 041902 456 YKNLKAFVD 464 (470)
Q Consensus 456 ~~~~~~~~~ 464 (470)
.+.++.+.+
T Consensus 397 ~~~~~~~~~ 405 (412)
T 3otg_A 397 DEVVRLLPG 405 (412)
T ss_dssp HHHHTTHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=4.2e-28 Score=240.07 Aligned_cols=339 Identities=14% Similarity=0.115 Sum_probs=207.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch-hhhcCCCCCCCCceEEEcCC-CCCCCCCCCCCCchhhHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAY-RRMANSPTPEDGLSFASFSD-GYDDGFNSKQNDPRRYVS 88 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~-~~v~~~~~~~~g~~~~~i~~-~~~~~~~~~~~~~~~~~~ 88 (470)
.||+|...|+.||++|.++||++|+++||+|+|++++.-. ..+++. .|+.+..++. ++.... ..... ...+.
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~----~g~~~~~i~~~~~~~~~-~~~~~-~~~~~ 76 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK----AGLPLHLIQVSGLRGKG-LKSLV-KAPLE 76 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG----GTCCEEECC----------------CHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh----cCCcEEEEECCCcCCCC-HHHHH-HHHHH
Confidence 4899988888899999999999999999999999876532 333366 7899998873 222110 01111 11111
Q ss_pred HHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch--hHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCccccccC
Q 041902 89 EFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP--WTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEEKVN 166 (470)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~--~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 166 (470)
.+ ..+.+..+.+++ .+||+||++.... .+..+|+.+|||+++. -+
T Consensus 77 ~~-----~~~~~~~~~l~~---~~PDvVi~~g~~~s~p~~laA~~~~iP~vih-e~------------------------ 123 (365)
T 3s2u_A 77 LL-----KSLFQALRVIRQ---LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH-EQ------------------------ 123 (365)
T ss_dssp HH-----HHHHHHHHHHHH---HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE-EC------------------------
T ss_pred HH-----HHHHHHHHHHHh---cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE-ec------------------------
Confidence 11 112223333333 5699999985443 4567889999999862 11
Q ss_pred CcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcCCCeeEeccccC
Q 041902 167 DLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDKFNMIAIGPLVA 246 (470)
Q Consensus 167 ~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~vGpl~~ 246 (470)
..+|++ . .+.. .+.+ +.++.. +++..+. ..+..++|+...
T Consensus 124 --n~~~G~-----------------~----------nr~l--~~~a--~~v~~~-~~~~~~~------~~k~~~~g~pvr 163 (365)
T 3s2u_A 124 --NAVAGT-----------------A----------NRSL--APIA--RRVCEA-FPDTFPA------SDKRLTTGNPVR 163 (365)
T ss_dssp --SSSCCH-----------------H----------HHHH--GGGC--SEEEES-STTSSCC---------CEECCCCCC
T ss_pred --chhhhh-----------------H----------HHhh--cccc--ceeeec-ccccccC------cCcEEEECCCCc
Confidence 012221 0 0111 1222 444333 2221110 235777887765
Q ss_pred CCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCC----CCEEEEEecCCCCC
Q 041902 247 SALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSG----HPFLWVIREHENKD 322 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~ 322 (470)
........ .+....+++++|+|..||.... ...+.+.+++.... ..+++..+.. ..+
T Consensus 164 ~~~~~~~~----------------~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~-~~~ 224 (365)
T 3s2u_A 164 GELFLDAH----------------ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ-HAE 224 (365)
T ss_dssp GGGCCCTT----------------SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT-THH
T ss_pred hhhccchh----------------hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc-ccc
Confidence 52211000 0111234567899999998753 23344556665532 3345544433 111
Q ss_pred CCCCchhhhHHHHHHhCCCeEEeeccCh-hhhccccccccceeccCchhhhhhhhcCCcEeecccc----chhhHHHHHH
Q 041902 323 KDKGEDDVVMKYKEELNEKGMIVPWCSQ-VEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW----TDQGTNAKII 397 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~nv~v~~~vp~-~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~----~DQ~~nA~rl 397 (470)
.+.+.+ +..+.++.+.+|+++ ..+|+.+|+ +|||+|.+|++|++++|+|+|++|+. .+|..||+.+
T Consensus 225 ------~~~~~~-~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 225 ------ITAERY-RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp ------HHHHHH-HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred ------ccccee-cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 222222 356788999999987 579999999 99999999999999999999999974 5899999999
Q ss_pred HhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHh
Q 041902 398 VDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDF 466 (470)
Q Consensus 398 ~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l 466 (470)
++ .|+|..+.. .+++++.|.++|.++|+ |++.+++ |++..++. . ...+.+.+.+.+..|
T Consensus 296 ~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~-d~~~~~~---m~~~a~~~-~-~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 296 VR-SGAGRLLPQ---KSTGAAELAAQLSEVLM-HPETLRS---MADQARSL-A-KPEATRTVVDACLEV 354 (365)
T ss_dssp HT-TTSEEECCT---TTCCHHHHHHHHHHHHH-CTHHHHH---HHHHHHHT-C-CTTHHHHHHHHHHHH
T ss_pred HH-CCCEEEeec---CCCCHHHHHHHHHHHHC-CHHHHHH---HHHHHHhc-C-CccHHHHHHHHHHHH
Confidence 98 999999985 78999999999999999 8865443 44444332 1 123444555555554
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=2.2e-26 Score=202.64 Aligned_cols=162 Identities=22% Similarity=0.406 Sum_probs=137.5
Q ss_pred ChhHHHHhhccCCCCceEEEEecccc-cCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeE
Q 041902 265 SKEYYMEWLSSKPKSSVIYVAFGTIC-VLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGM 343 (470)
Q Consensus 265 ~~~~~~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ 343 (470)
.++++.+|++..+++++|||++||.. ....+.+..++.++...+.+++|+.+.. ... .+++|+.
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~-~~~--------------~~~~~v~ 71 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN-KPD--------------TLGLNTR 71 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS-CCT--------------TCCTTEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc-Ccc--------------cCCCcEE
Confidence 34899999987777789999999986 3456778889999988888888887643 111 2468999
Q ss_pred EeeccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHH
Q 041902 344 IVPWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRC 423 (470)
Q Consensus 344 v~~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~ 423 (470)
+.+|+|+.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.+.. .+++.++|.++
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~ 147 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNA 147 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHH
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHH
Confidence 99999999999554445599999999999999999999999999999999999998 999999986 67899999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHH
Q 041902 424 LELVMGEGDEFRGNSLKWKDLAR 446 (470)
Q Consensus 424 i~~vl~~~~~~r~~a~~~~~~~~ 446 (470)
|.+++. |++|+++++++++.++
T Consensus 148 i~~ll~-~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 148 LKRVIN-DPSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHH-CHHHHHHHHHHC----
T ss_pred HHHHHc-CHHHHHHHHHHHHHhh
Confidence 999999 9999999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=1.9e-19 Score=177.61 Aligned_cols=317 Identities=13% Similarity=0.062 Sum_probs=197.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc--hhhhcCCCCCCCCceEEEcCCC-CCCCCCCCCCCchhhH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA--YRRMANSPTPEDGLSFASFSDG-YDDGFNSKQNDPRRYV 87 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~--~~~v~~~~~~~~g~~~~~i~~~-~~~~~~~~~~~~~~~~ 87 (470)
|||++++.+..||..+++.|+++|.++||+|++++.... ...+ +. .|+.++.++.. +.. ... ...+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-~~----~g~~~~~~~~~~~~~-----~~~-~~~~ 75 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV-PK----HGIEIDFIRISGLRG-----KGI-KALI 75 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG-GG----GTCEEEECCCCCCTT-----CCH-HHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc-cc----cCCceEEecCCccCc-----Ccc-HHHH
Confidence 899999988889999999999999999999999987653 2344 54 68888877632 111 010 1111
Q ss_pred HHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCcccccc
Q 041902 88 SEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL--PWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEEKV 165 (470)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~--~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 165 (470)
..... ....+..+.+.+++ .+||+|+++... ..+..+++.+|+|++......
T Consensus 76 ~~~~~-~~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------------- 129 (364)
T 1f0k_A 76 AAPLR-IFNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------------- 129 (364)
T ss_dssp TCHHH-HHHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------------
T ss_pred HHHHH-HHHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------------
Confidence 10111 11122334444443 469999998543 345677888999998632110
Q ss_pred CCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcCCCeeEecccc
Q 041902 166 NDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDKFNMIAIGPLV 245 (470)
Q Consensus 166 ~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~vGpl~ 245 (470)
.++ . ..+. ..+.. +.+++.+... ++ ++.++|..+
T Consensus 130 -----~~~--------------------~-------~~~~--~~~~~--d~v~~~~~~~--------~~--~~~~i~n~v 163 (364)
T 1f0k_A 130 -----IAG--------------------L-------TNKW--LAKIA--TKVMQAFPGA--------FP--NAEVVGNPV 163 (364)
T ss_dssp -----SCC--------------------H-------HHHH--HTTTC--SEEEESSTTS--------SS--SCEECCCCC
T ss_pred -----CCc--------------------H-------HHHH--HHHhC--CEEEecChhh--------cC--CceEeCCcc
Confidence 000 0 0000 11233 5666544321 22 455666544
Q ss_pred CCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhC--CCCEEEEEecCCCCCC
Q 041902 246 ASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDS--GHPFLWVIREHENKDK 323 (470)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~ 323 (470)
...... + . .. ...+...+++++|++..|+... ......+++++... +.+++++++.+ ...
T Consensus 164 ~~~~~~-----------~-~-~~-~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~-~~~- 225 (364)
T 1f0k_A 164 RTDVLA-----------L-P-LP-QQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG-SQQ- 225 (364)
T ss_dssp CHHHHT-----------S-C-CH-HHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT-CHH-
T ss_pred chhhcc-----------c-c-hh-hhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc-hHH-
Confidence 321100 0 0 11 1112222345678888888763 33445555665553 34556666655 211
Q ss_pred CCCchhhhHHHHHHhC-CCeEEeeccC-hhhhccccccccceeccCchhhhhhhhcCCcEeecccc---chhhHHHHHHH
Q 041902 324 DKGEDDVVMKYKEELN-EKGMIVPWCS-QVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW---TDQGTNAKIIV 398 (470)
Q Consensus 324 ~~~~~~~~~~~~~~~~-~nv~v~~~vp-~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~---~DQ~~nA~rl~ 398 (470)
.+.... +..+ +|+.+.+|++ ...+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.
T Consensus 226 -----~l~~~~-~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~ 297 (364)
T 1f0k_A 226 -----SVEQAY-AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE 297 (364)
T ss_dssp -----HHHHHH-HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred -----HHHHHH-hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH
Confidence 222211 1233 5899999994 4789999999 99999988999999999999999987 79999999999
Q ss_pred hhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 041902 399 DFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKD 443 (470)
Q Consensus 399 ~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~ 443 (470)
+ .|.|..++. .+++.++|.++|.++ . ++.+++..+-+.
T Consensus 298 ~-~g~g~~~~~---~d~~~~~la~~i~~l-~--~~~~~~~~~~~~ 335 (364)
T 1f0k_A 298 K-AGAAKIIEQ---PQLSVDAVANTLAGW-S--RETLLTMAERAR 335 (364)
T ss_dssp H-TTSEEECCG---GGCCHHHHHHHHHTC-C--HHHHHHHHHHHH
T ss_pred h-CCcEEEecc---ccCCHHHHHHHHHhc-C--HHHHHHHHHHHH
Confidence 8 999999886 567799999999999 4 555554444433
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.68 E-value=1.3e-15 Score=143.56 Aligned_cols=263 Identities=14% Similarity=0.072 Sum_probs=164.4
Q ss_pred CEEEEEcCC----CccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhh
Q 041902 11 PHFLLVTFP----AQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRY 86 (470)
Q Consensus 11 ~~il~~~~~----~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 86 (470)
|||+|.+-+ +.||+.+++.||++|+ +|+|++.......+ +. .|+....++.. + .
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~-~~----~g~~v~~l~~~---------d--~-- 58 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLI-DE----IPYPVYELSSE---------S--I-- 58 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCG-GG----CCSCEEECSSS---------C--H--
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHH-HH----CCCeEEEcCcc---------C--H--
Confidence 677777654 5699999999999999 89999877655555 55 57777776631 0 0
Q ss_pred HHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhH---HHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCcccc
Q 041902 87 VSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWT---AEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEE 163 (470)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~---~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 163 (470)
..+.++++. .++|+||.|.+..-. ..+...++++.+.+ ++.-.
T Consensus 59 ---------~~~~~~l~~------~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~i------------------DD~~~- 104 (282)
T 3hbm_A 59 ---------YELINLIKE------EKFELLIIDHYGISVDDEKLIKLETGVKILSF------------------DDEIK- 104 (282)
T ss_dssp ---------HHHHHHHHH------HTCSEEEEECTTCCHHHHHHHHHHHCCEEEEE------------------CSSCC-
T ss_pred ---------HHHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHhcCcEEEEE------------------ecCCC-
Confidence 112233332 359999999877533 22233358887764 11000
Q ss_pred ccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcCCCeeEecc
Q 041902 164 KVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDKFNMIAIGP 243 (470)
Q Consensus 164 ~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~vGp 243 (470)
+ ..+ |.++-.+...-...+....+....++.||
T Consensus 105 --------~-------------------------------------~~~--Dllin~~~~~~~~~Y~~~~p~~~~~l~G~ 137 (282)
T 3hbm_A 105 --------P-------------------------------------HHC--DILLNVNAYAKASDYEGLVPFKCEVRCGF 137 (282)
T ss_dssp --------C-------------------------------------CCC--SEEEECSTTCCGGGGTTTCC-CCEEEESG
T ss_pred --------c-------------------------------------ccC--CEEEeCCcccchhhccccCCCCCeEeeCC
Confidence 0 012 44433322111100000011112457787
Q ss_pred ccCCCccCCcccCCCCCCCCCChhHHHHhhc-cCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCC
Q 041902 244 LVASALWDGKELYGGDLCKNSSKEYYMEWLS-SKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKD 322 (470)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 322 (470)
-... .+++....-. .+++.+.|+|++|..... +....+++++.... ++.++.+.+ .
T Consensus 138 ~Y~~-----------------lR~eF~~~~~~~r~~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~-~-- 194 (282)
T 3hbm_A 138 SYAL-----------------IREEFYQEAKENRKKKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSS-N-- 194 (282)
T ss_dssp GGCC-----------------CCHHHHHHTTCCCCCCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTT-C--
T ss_pred cccc-----------------cCHHHHHhhhhccccCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCC-c--
Confidence 3333 1122222111 223456899999975422 35566777776654 677777665 2
Q ss_pred CCCCchhhhHHHHHHh--CCCeEEeeccChh-hhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHh
Q 041902 323 KDKGEDDVVMKYKEEL--NEKGMIVPWCSQV-EVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVD 399 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~~--~~nv~v~~~vp~~-~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~ 399 (470)
...+.+.+.. .+|+.+..|+++. .+|..+++ +|++|| +|++|+++.|+|++++|...+|..||..+++
T Consensus 195 ------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~ 265 (282)
T 3hbm_A 195 ------PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK 265 (282)
T ss_dssp ------TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH
T ss_pred ------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH
Confidence 2223333221 2589999999875 69999999 999999 8999999999999999999999999999998
Q ss_pred hhcceeEeee
Q 041902 400 FCKTGVRVKA 409 (470)
Q Consensus 400 ~~GvG~~l~~ 409 (470)
.|++..+..
T Consensus 266 -~G~~~~~~~ 274 (282)
T 3hbm_A 266 -KGYEVEYKY 274 (282)
T ss_dssp -TTCEEECGG
T ss_pred -CCCEEEcch
Confidence 999999864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.56 E-value=3.5e-15 Score=135.08 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=93.9
Q ss_pred CCCCceEEEEecccccCCHHHHHHH-----HHHHHhCC-CCEEEEEecCCCCCCCCCchhhhHHHHHHh---------C-
Q 041902 276 KPKSSVIYVAFGTICVLEKRQVEEI-----ARGLLDSG-HPFLWVIREHENKDKDKGEDDVVMKYKEEL---------N- 339 (470)
Q Consensus 276 ~~~~~vV~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~- 339 (470)
.+++++|||+.||... -.+.+..+ +.+|...+ .++++.++.. ... .. ..+.+.. |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~-~~~------~~-~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRN-YSS------EF-EHLVQERGGQRESQKIPI 95 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSS-SCC------CC-CSHHHHHTCEECSCCCSS
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCC-chh------hH-HHHHHhhhcccccccccc
Confidence 3567899999999742 23434433 37787777 6888888765 321 00 1111111 1
Q ss_pred ----------------C--CeEEeeccChh-hhcc-ccccccceeccCchhhhhhhhcCCcEeecccc----chhhHHHH
Q 041902 340 ----------------E--KGMIVPWCSQV-EVLS-HEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW----TDQGTNAK 395 (470)
Q Consensus 340 ----------------~--nv~v~~~vp~~-~vl~-~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~----~DQ~~nA~ 395 (470)
. ++.+.+|+++. .+|+ .+++ +|||||.||++|++++|+|+|++|.. -||..||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~ 173 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIAD 173 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHH
Confidence 2 34456888774 8999 9999 99999999999999999999999974 36999999
Q ss_pred HHHhhhcceeEeeecCCCCcCHHHHHHHHHHH
Q 041902 396 IIVDFCKTGVRVKANEEGILESDEIKRCLELV 427 (470)
Q Consensus 396 rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~v 427 (470)
++++ .|+|+.+. .+.|.++|+++
T Consensus 174 ~l~~-~G~~~~~~--------~~~L~~~i~~l 196 (224)
T 2jzc_A 174 KFVE-LGYVWSCA--------PTETGLIAGLR 196 (224)
T ss_dssp HHHH-HSCCCEEC--------SCTTTHHHHHH
T ss_pred HHHH-CCCEEEcC--------HHHHHHHHHHH
Confidence 9998 99987663 34566666666
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.42 E-value=2.3e-11 Score=120.08 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=87.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEecCCCCCCCCCchhhhHHHHHHh--CCCeEEeeccCh
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDS-----GHPFLWVIREHENKDKDKGEDDVVMKYKEEL--NEKGMIVPWCSQ 350 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~nv~v~~~vp~ 350 (470)
++++|+++.|...... .+..+++++... +..+++..+.+ . .+.+.+++.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-~--------~~~~~l~~~~~~~~~v~~~g~~g~ 265 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-P--------VVREAVFPVLKGVRNFVLLDPLEY 265 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-H--------HHHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-H--------HHHHHHHHHhccCCCEEEECCCCH
Confidence 3457777777553222 344455555432 33444333332 1 1223333322 358888865554
Q ss_pred ---hhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHH
Q 041902 351 ---VEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELV 427 (470)
Q Consensus 351 ---~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~v 427 (470)
..+++.+++ +|+++| |.+.||+++|+|+|+.+...++... .+ .|.|+.+. .+.++|.+++.++
T Consensus 266 ~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d~~~la~~i~~l 331 (376)
T 1v4v_A 266 GSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TDPEGVYRVVKGL 331 (376)
T ss_dssp HHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CCHHHHHHHHHHH
Confidence 578999999 999884 5566999999999998866666652 44 68887764 3899999999999
Q ss_pred hcCCHHHHHHHH
Q 041902 428 MGEGDEFRGNSL 439 (470)
Q Consensus 428 l~~~~~~r~~a~ 439 (470)
++ |++.+++..
T Consensus 332 l~-d~~~~~~~~ 342 (376)
T 1v4v_A 332 LE-NPEELSRMR 342 (376)
T ss_dssp HT-CHHHHHHHH
T ss_pred Hh-ChHhhhhhc
Confidence 99 886554433
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.36 E-value=6.8e-10 Score=109.83 Aligned_cols=347 Identities=10% Similarity=0.007 Sum_probs=187.7
Q ss_pred cCCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCccchh---hhcCCCCCCCCceEEEcCCCCCCCCCCC
Q 041902 7 RQHQPHFLLVTF--P--AQGHINPALQLARRLIRIGTRVTFATTIFAYR---RMANSPTPEDGLSFASFSDGYDDGFNSK 79 (470)
Q Consensus 7 ~~~~~~il~~~~--~--~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~---~v~~~~~~~~g~~~~~i~~~~~~~~~~~ 79 (470)
|+++|||++++. + ..|.-.-+..+++.| +||+|++++...... ..... .++.++.++......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKT----LDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTT----CSSEEEEESSSSCCS----
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccc----cceEEEEcccccccc----
Confidence 567899999985 3 357778889999999 799999998765543 22134 788888887532111
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch--hHHHHHHHcCCCeEEEechhhHHHHHHHHhhhcc
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP--WTAEVARAYHLPSALLWIQPALVFDVYYYYFYGY 157 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~--~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~ 157 (470)
.. .....+.+.+++ .+||+|++....+ ....+++.+|+|.+++....... .
T Consensus 71 ------~~--------~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------~---- 123 (394)
T 3okp_A 71 ------TP--------TTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV------G---- 123 (394)
T ss_dssp ------CH--------HHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH------H----
T ss_pred ------ch--------hhHHHHHHHHHh---cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh------h----
Confidence 11 111222233333 5699999865433 45666888999955533221100 0
Q ss_pred CCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhc-CC
Q 041902 158 GDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAID-KF 236 (470)
Q Consensus 158 ~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~-~~ 236 (470)
. ........... ..++.+ +.++..+....+.- ...+. ..
T Consensus 124 -------------~---------------------~~~~~~~~~~~---~~~~~~--d~ii~~s~~~~~~~-~~~~~~~~ 163 (394)
T 3okp_A 124 -------------W---------------------SMLPGSRQSLR---KIGTEV--DVLTYISQYTLRRF-KSAFGSHP 163 (394)
T ss_dssp -------------H---------------------TTSHHHHHHHH---HHHHHC--SEEEESCHHHHHHH-HHHHCSSS
T ss_pred -------------h---------------------hhcchhhHHHH---HHHHhC--CEEEEcCHHHHHHH-HHhcCCCC
Confidence 0 00000111111 123456 88888876655542 22221 23
Q ss_pred CeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEE
Q 041902 237 NMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVL-EKRQVEEIARGLLDS--GHPFLW 313 (470)
Q Consensus 237 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~-~~~~~~~~~~al~~~--~~~~i~ 313 (470)
++..+.+-+......... .. ....+.+.+.-. ++..+++..|+.... ..+.+-.++..+... +.+++
T Consensus 164 ~~~vi~ngv~~~~~~~~~-------~~-~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~- 233 (394)
T 3okp_A 164 TFEHLPSGVDVKRFTPAT-------PE-DKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLL- 233 (394)
T ss_dssp EEEECCCCBCTTTSCCCC-------HH-HHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEE-
T ss_pred CeEEecCCcCHHHcCCCC-------ch-hhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEE-
Confidence 466666544432111000 00 012233333222 233566677886522 223333333333332 33433
Q ss_pred EEecCCCCCCCCCchhhhHHHH---HHhCCCeEEeeccChhh---hcccccccccee-----------ccCchhhhhhhh
Q 041902 314 VIREHENKDKDKGEDDVVMKYK---EELNEKGMIVPWCSQVE---VLSHEAVGCFVT-----------HCGWNSSLESLV 376 (470)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~v~~~vp~~~---vl~~~~v~~~It-----------HGG~gt~~eal~ 376 (470)
+++.+ .....+. ..+.+++.+.+++|+.+ ++..+++ +|. -|...++.||++
T Consensus 234 i~G~g----------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 234 IVGSG----------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp EECCC----------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHH
T ss_pred EEcCc----------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHH
Confidence 34443 2222222 23458899999997644 7888888 776 555678999999
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcH
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSY 456 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~ 456 (470)
+|+|+|+.+.. .....+.+ |.|..+.. -+.+++.++|.+++. |++.+++..+-+... +...-+.+
T Consensus 302 ~G~PvI~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~---~~~~~s~~ 366 (394)
T 3okp_A 302 CGVPVIAGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLD-DPIRRAAMGAAGRAH---VEAEWSWE 366 (394)
T ss_dssp TTCCEEECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHT-CHHHHHHHHHHHHHH---HHHHTBHH
T ss_pred cCCCEEEeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHh-CHHHHHHHHHHHHHH---HHHhCCHH
Confidence 99999997653 33334444 57777763 579999999999999 875444333222221 11224555
Q ss_pred HHHHHHHHHhh
Q 041902 457 KNLKAFVDDFG 467 (470)
Q Consensus 457 ~~~~~~~~~l~ 467 (470)
....++++-+.
T Consensus 367 ~~~~~~~~~~~ 377 (394)
T 3okp_A 367 IMGERLTNILQ 377 (394)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555443
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.34 E-value=2.5e-09 Score=107.62 Aligned_cols=350 Identities=14% Similarity=0.131 Sum_probs=178.0
Q ss_pred cCCCCEEEEEcC---C--------CccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh-cCCCCCCCCceEEEcCCCCCC
Q 041902 7 RQHQPHFLLVTF---P--------AQGHINPALQLARRLIRIGTRVTFATTIFAYRRM-ANSPTPEDGLSFASFSDGYDD 74 (470)
Q Consensus 7 ~~~~~~il~~~~---~--------~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~~~~~~~g~~~~~i~~~~~~ 74 (470)
..+.|||++++. | ..|+-..+..|++.|.++||+|++++.......- ..... .|+.++.++.....
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~--~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVA--ENLRVINIAAGPYE 94 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEE--TTEEEEEECCSCSS
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccccccc--CCeEEEEecCCCcc
Confidence 345589999995 2 3577888999999999999999999865432211 00000 57888877632111
Q ss_pred CCCCCCCCchhhHHHHHHHhHHHHHHHHHh-hhhcCCCCccEEEeCCCch--hHHHHHHHcCCCeEEEechhhHHHHHHH
Q 041902 75 GFNSKQNDPRRYVSEFKRRSSEALTEIITG-SENQGAQPFTCLVYSLLLP--WTAEVARAYHLPSALLWIQPALVFDVYY 151 (470)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~pDlvv~d~~~~--~~~~~A~~~giP~i~~~~~~~~~~~~~~ 151 (470)
.. ..... ...+..+. ..+++. ++.. .+||+|++..... .+..+++.+++|++.........
T Consensus 95 ~~-~~~~~-~~~~~~~~-------~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----- 158 (438)
T 3c48_A 95 GL-SKEEL-PTQLAAFT-------GGMLSFTRREK--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAV----- 158 (438)
T ss_dssp SC-CGGGG-GGGHHHHH-------HHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHH-----
T ss_pred cc-chhHH-HHHHHHHH-------HHHHHHHHhcc--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccc-----
Confidence 10 00111 11222211 122222 2221 2499999874322 34556778899998754332100
Q ss_pred HhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHH
Q 041902 152 YYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLR 231 (470)
Q Consensus 152 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 231 (470)
. ...+ . .. ............ ...++.+ +.+++.+....+.- ..
T Consensus 159 --~----------------~~~~---~--------~~---~~~~~~~~~~~~--~~~~~~~--d~ii~~s~~~~~~~-~~ 201 (438)
T 3c48_A 159 --K----------------NSYR---D--------DS---DTPESEARRICE--QQLVDNA--DVLAVNTQEEMQDL-MH 201 (438)
T ss_dssp --H----------------SCC------------------CCHHHHHHHHHH--HHHHHHC--SEEEESSHHHHHHH-HH
T ss_pred --c----------------cccc---c--------cc---CCcchHHHHHHH--HHHHhcC--CEEEEcCHHHHHHH-HH
Confidence 0 0000 0 00 000000111111 1223556 88888876655542 12
Q ss_pred Hhc--CCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccC-CHHHHHHHHHHHHhC-
Q 041902 232 AID--KFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVL-EKRQVEEIARGLLDS- 307 (470)
Q Consensus 232 ~~~--~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~-~~~~~~~~~~al~~~- 307 (470)
.+. ..++..+..-+......... .. ....+.+-+.-.+++ .+++..|+.... ..+.+-..+..+...
T Consensus 202 ~~g~~~~k~~vi~ngvd~~~~~~~~-------~~-~~~~~r~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~ 272 (438)
T 3c48_A 202 HYDADPDRISVVSPGADVELYSPGN-------DR-ATERSRRELGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRD 272 (438)
T ss_dssp HHCCCGGGEEECCCCCCTTTSCCC------------CHHHHHHTTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHC
T ss_pred HhCCChhheEEecCCccccccCCcc-------cc-hhhhhHHhcCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhhC
Confidence 221 12366666554432111000 00 001133333222233 456677886632 223332333333222
Q ss_pred -CCCE-EEEEecCCCCCCCCCchhhhHHHHHH--hCCCeEEeeccCh---hhhccccccccceec----cCchhhhhhhh
Q 041902 308 -GHPF-LWVIREHENKDKDKGEDDVVMKYKEE--LNEKGMIVPWCSQ---VEVLSHEAVGCFVTH----CGWNSSLESLV 376 (470)
Q Consensus 308 -~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~v~~~vp~---~~vl~~~~v~~~ItH----GG~gt~~eal~ 376 (470)
+.++ +++++.....+ ...+.+. .+.+. +.+++.+.+++|+ ..++..+++ +|.- |...++.||++
T Consensus 273 p~~~~~l~i~G~~~~~g--~~~~~l~-~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama 347 (438)
T 3c48_A 273 PDRNLRVIICGGPSGPN--ATPDTYR-HMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQA 347 (438)
T ss_dssp TTCSEEEEEECCBC--------CHHH-HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHH
T ss_pred CCcceEEEEEeCCCCCC--cHHHHHH-HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHH
Confidence 1233 33344310000 0000222 12222 3578999999986 458888998 7754 33458999999
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHH
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRG 436 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~ 436 (470)
+|+|+|+.+. ......+.+ -+.|+.++. -+.+++.++|.++++ |++.++
T Consensus 348 ~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~-----~d~~~la~~i~~l~~-~~~~~~ 396 (438)
T 3c48_A 348 SGTPVIAARV----GGLPIAVAE-GETGLLVDG-----HSPHAWADALATLLD-DDETRI 396 (438)
T ss_dssp TTCCEEEESC----TTHHHHSCB-TTTEEEESS-----CCHHHHHHHHHHHHH-CHHHHH
T ss_pred cCCCEEecCC----CChhHHhhC-CCcEEECCC-----CCHHHHHHHHHHHHc-CHHHHH
Confidence 9999998754 445556665 567888864 589999999999999 875443
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.34 E-value=5.5e-11 Score=118.61 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=76.0
Q ss_pred CCeEEeeccC---hhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcC
Q 041902 340 EKGMIVPWCS---QVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILE 416 (470)
Q Consensus 340 ~nv~v~~~vp---~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~ 416 (470)
+++.+.++++ ...+++.+++ +|+-.|. .+.||+.+|+|+|++|-..+++. +.+ .|.|+.+. .+
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~-~g~~~lv~------~d 347 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIE-AGTLKLIG------TN 347 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHH-HTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----hee-CCcEEEcC------CC
Confidence 6898888886 4568888998 9988753 33799999999999976666654 235 68877764 28
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHh
Q 041902 417 SDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDF 466 (470)
Q Consensus 417 ~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l 466 (470)
.++|.+++.+++. |++.+++..+-+.. + .+++++++.++.+.+.+
T Consensus 348 ~~~l~~ai~~ll~-~~~~~~~m~~~~~~---~-g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 348 KENLIKEALDLLD-NKESHDKMAQAANP---Y-GDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHHH-CHHHHHHHHHSCCT---T-CCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CHHHHHHHHhhcCc---c-cCCcHHHHHHHHHHHHh
Confidence 9999999999999 88765544332222 2 34555555555555444
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.31 E-value=2e-10 Score=113.54 Aligned_cols=135 Identities=17% Similarity=0.162 Sum_probs=87.3
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEecCCCCCCCCCchhhhHHHHHHhC--CCeEEeeccCh
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDS-----GHPFLWVIREHENKDKDKGEDDVVMKYKEELN--EKGMIVPWCSQ 350 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~nv~v~~~vp~ 350 (470)
++++|+++.|+..... ..+..+++++... +..+++..+.+ . ...+.+.+... +++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~---~------~~~~~l~~~~~~~~~v~~~g~~~~ 273 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN---P------NVREPVNRILGHVKNVILIDPQEY 273 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC---H------HHHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC---H------HHHHHHHHHhhcCCCEEEeCCCCH
Confidence 4567888888765332 2344455554432 33344322222 1 12233333222 68888666654
Q ss_pred ---hhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHH
Q 041902 351 ---VEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELV 427 (470)
Q Consensus 351 ---~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~v 427 (470)
..+++.+++ +|+.+| +++.||+++|+|+|+.+..++... +.+ .|.|+.++ . +.++|.+++.++
T Consensus 274 ~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~----~--d~~~la~~i~~l 339 (384)
T 1vgv_A 274 LPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG----T--DKQRIVEEVTRL 339 (384)
T ss_dssp HHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC----S--SHHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC----C--CHHHHHHHHHHH
Confidence 568989999 999985 458899999999999987444333 344 58888875 2 899999999999
Q ss_pred hcCCHHHHHH
Q 041902 428 MGEGDEFRGN 437 (470)
Q Consensus 428 l~~~~~~r~~ 437 (470)
++ |++.+++
T Consensus 340 l~-d~~~~~~ 348 (384)
T 1vgv_A 340 LK-DENEYQA 348 (384)
T ss_dssp HH-CHHHHHH
T ss_pred Hh-ChHHHhh
Confidence 99 8865443
No 30
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.27 E-value=1.6e-09 Score=106.47 Aligned_cols=327 Identities=12% Similarity=0.053 Sum_probs=169.5
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCccchhhh---cCCCCCCCCceE-EEcCCCCCCCCCCC
Q 041902 6 HRQHQPHFLLVTFPAQGHINPALQLARRLIRI-G-TRVTFATTIFAYRRM---ANSPTPEDGLSF-ASFSDGYDDGFNSK 79 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~-G-h~V~~~~~~~~~~~v---~~~~~~~~g~~~-~~i~~~~~~~~~~~ 79 (470)
+|+++|||++++. +.++......++++|+++ | |+|.++++....+.. .+. .++.. +.++-.. +
T Consensus 4 ~m~~~mkIl~v~~-~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~----- 72 (375)
T 3beo_A 4 DMTERLKVMTIFG-TRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI----FGITPDFDLNIMK-D----- 72 (375)
T ss_dssp CCSSCEEEEEEEC-SHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH----HTCCCSEECCCCC-T-----
T ss_pred CCCcCceEEEEec-CcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH----cCCCCccccccCC-C-----
Confidence 4677899999984 467777888999999987 5 888777655432211 011 12221 1221110 0
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch---hHHHHHHHcCCCeEEEechhhHHHHHHHHhhhc
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP---WTAEVARAYHLPSALLWIQPALVFDVYYYYFYG 156 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~---~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~ 156 (470)
.. ....... .....+.++++. .+||+|++..... .+..+++.+|+|++.+...
T Consensus 73 -~~--~~~~~~~-~~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~-------------- 128 (375)
T 3beo_A 73 -RQ--TLIDITT-RGLEGLDKVMKE------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAG-------------- 128 (375)
T ss_dssp -TC--CHHHHHH-HHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCC--------------
T ss_pred -cc--cHHHHHH-HHHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecc--------------
Confidence 00 1111111 111222333333 4699999954322 3446778899998863211
Q ss_pred cCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcCC
Q 041902 157 YGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDKF 236 (470)
Q Consensus 157 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 236 (470)
+ .... .+.. .. . ....... .+.+ +.+++.+....+.-....++..
T Consensus 129 -----------------~---~~~~---~~~~----~~-~---~~~~~~~--~~~~--d~ii~~s~~~~~~~~~~g~~~~ 173 (375)
T 3beo_A 129 -----------------L---RTWD---KYSP----YP-E---EMNRQLT--GVMA--DLHFSPTAKSATNLQKENKDES 173 (375)
T ss_dssp -----------------C---CCSC---TTSS----TT-H---HHHHHHH--HHHC--SEEEESSHHHHHHHHHTTCCGG
T ss_pred -----------------c---cccc---ccCC----Ch-h---HhhhhHH--hhhh--heeeCCCHHHHHHHHHcCCCcc
Confidence 0 0000 0000 00 0 0111111 1224 7777776655443211111112
Q ss_pred CeeEeccc-cCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhC---CCCEE
Q 041902 237 NMIAIGPL-VASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDS---GHPFL 312 (470)
Q Consensus 237 ~~~~vGpl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~---~~~~i 312 (470)
++..+|.. ........... ....+.+-+ +++++++++.|...... ..+..+++++... ..++.
T Consensus 174 ~i~vi~n~~~d~~~~~~~~~---------~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~ 240 (375)
T 3beo_A 174 RIFITGNTAIDALKTTVKET---------YSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQ 240 (375)
T ss_dssp GEEECCCHHHHHHHHHCCSS---------CCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEE
T ss_pred cEEEECChhHhhhhhhhhhh---------hhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeE
Confidence 46777644 22100000000 001222212 24557777888755322 2345555655442 12343
Q ss_pred EEEecCCCCCCCCCchhhhHHHHHHhC--CCeEEeeccCh---hhhccccccccceeccCchhhhhhhhcCCcEeecccc
Q 041902 313 WVIREHENKDKDKGEDDVVMKYKEELN--EKGMIVPWCSQ---VEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQW 387 (470)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~nv~v~~~vp~---~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~ 387 (470)
++++.+ ... .+...+.+.+. +++.+.+++++ ..+++.+++ +|+..| +++.||+++|+|+|+....
T Consensus 241 ~i~~~g-~~~------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~ 310 (375)
T 3beo_A 241 VVYPVH-MNP------VVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDT 310 (375)
T ss_dssp EEEECC-SCH------HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSC
T ss_pred EEEeCC-CCH------HHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCC
Confidence 444444 211 22233333333 68988777665 568888998 998874 5688999999999998543
Q ss_pred chhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHH
Q 041902 388 TDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGN 437 (470)
Q Consensus 388 ~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~ 437 (470)
+..++ +.+ .|.|..+. . +.++|.+++.++++ |++.+++
T Consensus 311 ~~~~e----~v~-~g~g~~v~-----~-d~~~la~~i~~ll~-~~~~~~~ 348 (375)
T 3beo_A 311 TERPE----GIE-AGTLKLAG-----T-DEETIFSLADELLS-DKEAHDK 348 (375)
T ss_dssp CSCHH----HHH-TTSEEECC-----S-CHHHHHHHHHHHHH-CHHHHHH
T ss_pred CCCce----eec-CCceEEcC-----C-CHHHHHHHHHHHHh-ChHhHhh
Confidence 33322 344 58887774 2 88999999999999 8865544
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.27 E-value=4.6e-09 Score=104.31 Aligned_cols=319 Identities=13% Similarity=0.074 Sum_probs=165.9
Q ss_pred ccCCCCEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCC
Q 041902 6 HRQHQPHFLLVTFP---A-QGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQN 81 (470)
Q Consensus 6 ~~~~~~~il~~~~~---~-~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~ 81 (470)
.+..+|||++++.. . .|.-.-+..+++.|.++||+|++++........ .......+ .++.++.... ...
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-----~~~ 88 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKL-PDYVVSGG-KAVPIPYNGS-----VAR 88 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCC-CTTEEECC-CCC---------------
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccC-CcccccCC-cEEeccccCC-----ccc
Confidence 44566999999852 2 456678999999999999999999887554322 11000011 2222221000 000
Q ss_pred CchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch--hHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCC
Q 041902 82 DPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP--WTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGD 159 (470)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~--~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~ 159 (470)
. . + .......+.+.++. .+||+|++..... .+..+++..++|++.......
T Consensus 89 ~-~-~-------~~~~~~~l~~~l~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~--------------- 141 (406)
T 2gek_A 89 L-R-F-------GPATHRKVKKWIAE---GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST--------------- 141 (406)
T ss_dssp ----C-------CHHHHHHHHHHHHH---HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC---------------
T ss_pred c-c-c-------cHHHHHHHHHHHHh---cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc---------------
Confidence 0 0 0 00011222222332 3599999875433 356667778999987533210
Q ss_pred ccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHH-HHHHhccCCeEEEcchHhhhHHHHHHhcCCCe
Q 041902 160 LIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQM-EAIVEETDPKILVNTFDALEAETLRAIDKFNM 238 (470)
Q Consensus 160 ~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 238 (470)
+ .. .....+.+.+ ..++.+ +.+++.+....+.-. ..++..++
T Consensus 142 ------------~-------------------~~---~~~~~~~~~~~~~~~~~--d~ii~~s~~~~~~~~-~~~~~~~~ 184 (406)
T 2gek_A 142 ------------T-------------------KS---LTLSVFQGILRPYHEKI--IGRIAVSDLARRWQM-EALGSDAV 184 (406)
T ss_dssp ------------C-------------------SH---HHHHHHHSTTHHHHTTC--SEEEESSHHHHHHHH-HHHSSCEE
T ss_pred ------------h-------------------hh---hhHHHHHHHHHHHHhhC--CEEEECCHHHHHHHH-HhcCCCcE
Confidence 0 00 0001111111 223455 788887765544321 22322234
Q ss_pred eEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEeccc-cc-CCHHHHHHHHHHHHhCCCCE-EEEE
Q 041902 239 IAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTI-CV-LEKRQVEEIARGLLDSGHPF-LWVI 315 (470)
Q Consensus 239 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~-~~-~~~~~~~~~~~al~~~~~~~-i~~~ 315 (470)
.+.+.+......... . . ....+++ .+++..|+. .. ...+.+-.++..+...+.++ ++++
T Consensus 185 -vi~~~v~~~~~~~~~-------~--~-------~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 246 (406)
T 2gek_A 185 -EIPNGVDVASFADAP-------L--L-------DGYPREG-RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV 246 (406)
T ss_dssp -ECCCCBCHHHHHTCC-------C--C-------TTCSCSS-CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred -EecCCCChhhcCCCc-------h--h-------hhccCCC-eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 555433221000000 0 0 0001112 456677877 42 22233333333333322222 3334
Q ss_pred ecCCCCCCCCCchhhhHHHHHH---hCCCeEEeeccCh---hhhccccccccceec----cCch-hhhhhhhcCCcEeec
Q 041902 316 REHENKDKDKGEDDVVMKYKEE---LNEKGMIVPWCSQ---VEVLSHEAVGCFVTH----CGWN-SSLESLVCGVPVVAF 384 (470)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~---~~~nv~v~~~vp~---~~vl~~~~v~~~ItH----GG~g-t~~eal~~GvP~v~~ 384 (470)
+.+ .. +.+.+. ..+++.+.+++++ ..++..+++ +|.- .|.| ++.||+++|+|+|+.
T Consensus 247 G~~----------~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~ 313 (406)
T 2gek_A 247 GRG----------DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVAS 313 (406)
T ss_dssp SCS----------CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEEC
T ss_pred cCC----------cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEe
Confidence 443 22 333322 2578998999987 478989999 6643 3444 899999999999997
Q ss_pred cccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHH
Q 041902 385 PQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGN 437 (470)
Q Consensus 385 P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~ 437 (470)
+. ......+.+ -+.|..++. -+.+++.++|.++++ +++.+++
T Consensus 314 ~~----~~~~e~i~~-~~~g~~~~~-----~d~~~l~~~i~~l~~-~~~~~~~ 355 (406)
T 2gek_A 314 DL----DAFRRVLAD-GDAGRLVPV-----DDADGMAAALIGILE-DDQLRAG 355 (406)
T ss_dssp CC----HHHHHHHTT-TTSSEECCT-----TCHHHHHHHHHHHHH-CHHHHHH
T ss_pred cC----CcHHHHhcC-CCceEEeCC-----CCHHHHHHHHHHHHc-CHHHHHH
Confidence 65 556666775 567887763 578999999999999 8865443
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.26 E-value=4.2e-10 Score=112.02 Aligned_cols=138 Identities=15% Similarity=0.131 Sum_probs=86.7
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEecCCCCCCCCCchhhhHHHHHH--hCCCeEEeeccC
Q 041902 277 PKSSVIYVAFGTICVLEKRQVEEIARGLLDS-----GHPFLWVIREHENKDKDKGEDDVVMKYKEE--LNEKGMIVPWCS 349 (470)
Q Consensus 277 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~v~~~vp 349 (470)
+++++|+++.+-...... .+..+++++... +..+++.++.+ . .+...+.+. ..+++.+.++++
T Consensus 228 ~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~---~------~~~~~l~~~~~~~~~v~~~~~lg 297 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN---P------NVREPVNKLLKGVSNIVLIEPQQ 297 (396)
T ss_dssp TTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC---H------HHHHHHHHHTTTCTTEEEECCCC
T ss_pred CCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC---h------HHHHHHHHHHcCCCCEEEeCCCC
Confidence 346678877632222111 245555555542 34444433322 1 222333332 236888877764
Q ss_pred ---hhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHH
Q 041902 350 ---QVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLEL 426 (470)
Q Consensus 350 ---~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~ 426 (470)
...+++.+++ +|+-.| |.+.||+++|+|+|+..-..+++. +.+ .|.++.+. .+.++|.+++.+
T Consensus 298 ~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~-~G~~~lv~------~d~~~l~~ai~~ 363 (396)
T 3dzc_A 298 YLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVA-AGTVKLVG------TNQQQICDALSL 363 (396)
T ss_dssp HHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHH-HTSEEECT------TCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHH-cCceEEcC------CCHHHHHHHHHH
Confidence 4578889998 999988 666899999999999865555532 344 68775543 269999999999
Q ss_pred HhcCCHHHHHHHH
Q 041902 427 VMGEGDEFRGNSL 439 (470)
Q Consensus 427 vl~~~~~~r~~a~ 439 (470)
+++ |++.+++..
T Consensus 364 ll~-d~~~~~~m~ 375 (396)
T 3dzc_A 364 LLT-DPQAYQAMS 375 (396)
T ss_dssp HHH-CHHHHHHHH
T ss_pred HHc-CHHHHHHHh
Confidence 999 887655443
No 33
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.25 E-value=5.8e-09 Score=104.56 Aligned_cols=347 Identities=12% Similarity=0.091 Sum_probs=175.1
Q ss_pred CCCEEEEEcCC----C-ccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh-----------------c--CCCCCCCCce
Q 041902 9 HQPHFLLVTFP----A-QGHINPALQLARRLIRIGTRVTFATTIFAYRRM-----------------A--NSPTPEDGLS 64 (470)
Q Consensus 9 ~~~~il~~~~~----~-~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v-----------------~--~~~~~~~g~~ 64 (470)
++|||++++.. . .|--.-+..||+.|+++||+|+++++......- . .. .|+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gv~ 76 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEER----GNLR 76 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEE----TTEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccC----CCce
Confidence 57999999843 3 344456889999999999999999954322110 0 11 5777
Q ss_pred EEEcCCCCCCCCCCCCCCchhhHHH----HHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch--hHHHHHHHcCCCeEE
Q 041902 65 FASFSDGYDDGFNSKQNDPRRYVSE----FKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP--WTAEVARAYHLPSAL 138 (470)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~--~~~~~A~~~giP~i~ 138 (470)
++.++..+... ......+... +.. ....+..+++.+.... .+||+|.+..... .+..+++..|+|++.
T Consensus 77 v~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~ 150 (439)
T 3fro_A 77 IYRIGGGLLDS----EDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVF 150 (439)
T ss_dssp EEEEESGGGGC----SSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEE
T ss_pred EEEecchhccc----cccccCCcchhhhhhHH-HHHHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEE
Confidence 77776411110 1110101222 211 2223334444441112 5799999875443 346667789999887
Q ss_pred EechhhHHHHHHHHhhhccCCccccccCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEE
Q 041902 139 LWIQPALVFDVYYYYFYGYGDLIEEKVNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKIL 218 (470)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l 218 (470)
....... ...+.. ......+ ... .. ..... -....+..+ +.++
T Consensus 151 ~~h~~~~------------~~~~~~----~~~~~~~--------~~~-~~---~~~~~-------~~~~~~~~a--d~ii 193 (439)
T 3fro_A 151 TIHRLNK------------SKLPAF----YFHEAGL--------SEL-AP---YPDID-------PEHTGGYIA--DIVT 193 (439)
T ss_dssp EESCCCC------------CCEEHH----HHHHTTC--------GGG-CC---SSEEC-------HHHHHHHHC--SEEE
T ss_pred Eeccccc------------ccCchH----HhCcccc--------ccc-cc---cceee-------Hhhhhhhhc--cEEE
Confidence 5432210 000000 0000000 000 00 00000 011223455 8888
Q ss_pred EcchHhhhHHHHHHhc--CCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccc-cC-CH
Q 041902 219 VNTFDALEAETLRAID--KFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTIC-VL-EK 294 (470)
Q Consensus 219 ~~~~~~l~~~~~~~~~--~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~-~~-~~ 294 (470)
..|....+.. ...+. ..++..+..-+......... .. ..... ....+.+-+.-. ++ .+++..|+.. .. ..
T Consensus 194 ~~S~~~~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~-~~-~~~~~-~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~ 267 (439)
T 3fro_A 194 TVSRGYLIDE-WGFFRNFEGKITYVFNGIDCSFWNESY-LT-GSRDE-RKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGV 267 (439)
T ss_dssp ESCHHHHHHT-HHHHGGGTTSEEECCCCCCTTTSCGGG-SC-SCHHH-HHHHHHHHHTCC-SC-EEEEEECCSSCTTBCH
T ss_pred ecCHHHHHHH-hhhhhhcCCceeecCCCCCchhcCccc-cc-chhhh-hHHHHHHHcCCC-CC-cEEEEEcccccccccH
Confidence 8776555542 22121 33566655544331110000 00 00000 012233333322 33 5666788876 32 33
Q ss_pred HHHHHHHHHHHhCC--CCE-EEEEecCCCCCCCCCchhhhH---HHHHHhCCCeEEeeccChh---hhccccccccceec
Q 041902 295 RQVEEIARGLLDSG--HPF-LWVIREHENKDKDKGEDDVVM---KYKEELNEKGMIVPWCSQV---EVLSHEAVGCFVTH 365 (470)
Q Consensus 295 ~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~nv~v~~~vp~~---~vl~~~~v~~~ItH 365 (470)
+.+-.++..+...+ .++ +++++.+ . . .... .+.+..+.++.+.+|+|+. .++..+++ +|.-
T Consensus 268 ~~li~a~~~l~~~~~~~~~~l~i~G~g-~-~------~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~p 337 (439)
T 3fro_A 268 DVLLKAIEILSSKKEFQEMRFIIIGKG-D-P------ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIP 337 (439)
T ss_dssp HHHHHHHHHHHTSGGGGGEEEEEECCC-C-H------HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEEC
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEcCC-C-h------hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeC
Confidence 44444444444422 233 2334433 1 1 1112 2223445444456889875 47888888 7643
Q ss_pred ----cCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhc
Q 041902 366 ----CGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMG 429 (470)
Q Consensus 366 ----GG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~ 429 (470)
|--.++.||+++|+|+|+... ......+.+ |.|..++. -+.+++.++|.++++
T Consensus 338 s~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~ 394 (439)
T 3fro_A 338 SYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-----GDPGELANAILKALE 394 (439)
T ss_dssp BSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHh
Confidence 334689999999999998753 445555544 68888864 589999999999987
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.22 E-value=1.4e-08 Score=99.54 Aligned_cols=163 Identities=12% Similarity=0.137 Sum_probs=101.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCC----CE-EEEEecCCCCCCCCCchhhhHHHHHH--hCCCeEEeeccCh-h
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGH----PF-LWVIREHENKDKDKGEDDVVMKYKEE--LNEKGMIVPWCSQ-V 351 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~v~~~vp~-~ 351 (470)
+.+++..|+.... ..+..+++++..... ++ +++++.+ ... .+. .+.+. +.+++.+.++... .
T Consensus 196 ~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~G~g-~~~------~~~-~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 196 QNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQD-KPR------KFE-ALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp CEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESSS-CCH------HHH-HHHHHHTCGGGEEEESCCSCHH
T ss_pred CeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEEcCC-CHH------HHH-HHHHHcCCCCcEEECCCcccHH
Confidence 3566677876532 345666777766532 22 3445544 211 222 22222 3478888887644 6
Q ss_pred hhcccccccccee----ccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHH
Q 041902 352 EVLSHEAVGCFVT----HCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELV 427 (470)
Q Consensus 352 ~vl~~~~v~~~It----HGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~v 427 (470)
.++..+++ +|. -|...++.||+++|+|+|+... ..+...+.+ -+.|..+. ..-+.+++.+++.++
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~----~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIA----EPFSQEQLNEVLRKA 334 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEEC----SSCCHHHHHHHHHHH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeC----CCCCHHHHHHHHHHH
Confidence 68888998 775 4667789999999999999765 345667776 78899886 235899999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 041902 428 MGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDD 465 (470)
Q Consensus 428 l~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
++ |++.+++..+-+.+..+. -.-.+..+.+.++++.
T Consensus 335 ~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 335 LT-QSPLRMAWAENARHYADT-QDLYSLPEKAADIITG 370 (374)
T ss_dssp HH-CHHHHHHHHHHHHHHHHH-SCCSCHHHHHHHHHHC
T ss_pred Hc-ChHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 99 886555444433333221 0123444444454443
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.22 E-value=3.1e-09 Score=108.99 Aligned_cols=86 Identities=24% Similarity=0.252 Sum_probs=64.6
Q ss_pred hCCCeEEeeccChh---hhcccc----ccccceec----cCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeE
Q 041902 338 LNEKGMIVPWCSQV---EVLSHE----AVGCFVTH----CGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVR 406 (470)
Q Consensus 338 ~~~nv~v~~~vp~~---~vl~~~----~v~~~ItH----GG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~ 406 (470)
+.++|.+.+++|+. .++..+ ++ +|.- |--.++.||+++|+|+|+... ......+.+ -..|..
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l 405 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVL 405 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEE
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEE
Confidence 35789999999764 478888 88 7643 333588999999999998753 345555665 457888
Q ss_pred eeecCCCCcCHHHHHHHHHHHhcCCHHHHH
Q 041902 407 VKANEEGILESDEIKRCLELVMGEGDEFRG 436 (470)
Q Consensus 407 l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~ 436 (470)
++. -+.+++.++|.++++ |++.++
T Consensus 406 ~~~-----~d~~~la~~i~~ll~-~~~~~~ 429 (499)
T 2r60_A 406 VDP-----EDPEDIARGLLKAFE-SEETWS 429 (499)
T ss_dssp ECT-----TCHHHHHHHHHHHHS-CHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHh-CHHHHH
Confidence 864 588999999999999 885443
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.06 E-value=1.5e-07 Score=93.12 Aligned_cols=320 Identities=10% Similarity=0.147 Sum_probs=165.9
Q ss_pred CEEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHH
Q 041902 11 PHFLLVTFPAQG-HINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSE 89 (470)
Q Consensus 11 ~~il~~~~~~~G-H~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 89 (470)
.++....+|..| .-.-+..|++.|.++||+|++++.......-... .++.+..++...... .... ...+.
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~----~~i~~~~~~~~~~~~---~~~~-~~~~~- 86 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVY----PNIYFHEVTVNQYSV---FQYP-PYDLA- 86 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCC----TTEEEECCCCC-------CCSC-CHHHH-
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccC----CceEEEecccccccc---cccc-cccHH-
Confidence 467777777654 5577789999999999999999875432211122 677777665211110 0111 11111
Q ss_pred HHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch--hHHHHHH-Hc--CCCeEEEechhhHHHHHHHHhhhccCCccccc
Q 041902 90 FKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP--WTAEVAR-AY--HLPSALLWIQPALVFDVYYYYFYGYGDLIEEK 164 (470)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~--~~~~~A~-~~--giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~ 164 (470)
....+.++++. .+||+|++..... ....++. .+ ++|++........ .
T Consensus 87 ----~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--------~---------- 138 (394)
T 2jjm_A 87 ----LASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--------T---------- 138 (394)
T ss_dssp ----HHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--------H----------
T ss_pred ----HHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--------c----------
Confidence 11122233333 3599999974432 2233444 34 5998875432110 0
Q ss_pred cCCcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhc-CCCeeEecc
Q 041902 165 VNDLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAID-KFNMIAIGP 243 (470)
Q Consensus 165 ~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~~~~vGp 243 (470)
..+. ..... .. .+ ..++.+ +.++..+....+.- ...+. ..++..+..
T Consensus 139 ------~~~~-----------------~~~~~---~~-~~--~~~~~a--d~ii~~s~~~~~~~-~~~~~~~~~~~vi~n 186 (394)
T 2jjm_A 139 ------VLGS-----------------DPSLN---NL-IR--FGIEQS--DVVTAVSHSLINET-HELVKPNKDIQTVYN 186 (394)
T ss_dssp ------TTTT-----------------CTTTH---HH-HH--HHHHHS--SEEEESCHHHHHHH-HHHTCCSSCEEECCC
T ss_pred ------ccCC-----------------CHHHH---HH-HH--HHHhhC--CEEEECCHHHHHHH-HHhhCCcccEEEecC
Confidence 0000 00000 11 11 123456 88888776555532 22221 235666665
Q ss_pred ccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHh---C-CCCEEEEEecCC
Q 041902 244 LVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLD---S-GHPFLWVIREHE 319 (470)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~---~-~~~~i~~~~~~~ 319 (470)
-+........ ....+.+-+...++ ..+++..|+.... ..+..+++++.. . +.+ +++++.+
T Consensus 187 gv~~~~~~~~-----------~~~~~~~~~~~~~~-~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~-l~i~G~g- 250 (394)
T 2jjm_A 187 FIDERVYFKR-----------DMTQLKKEYGISES-EKILIHISNFRKV--KRVQDVVQAFAKIVTEVDAK-LLLVGDG- 250 (394)
T ss_dssp CCCTTTCCCC-----------CCHHHHHHTTCC----CEEEEECCCCGG--GTHHHHHHHHHHHHHSSCCE-EEEECCC-
T ss_pred CccHHhcCCc-----------chHHHHHHcCCCCC-CeEEEEeeccccc--cCHHHHHHHHHHHHhhCCCE-EEEECCc-
Confidence 4443211100 11333333322122 2455567876532 223334444433 2 333 3445544
Q ss_pred CCCCCCCchhhhHHHHH---H--hCCCeEEeeccCh-hhhccccccccce----eccCchhhhhhhhcCCcEeeccccch
Q 041902 320 NKDKDKGEDDVVMKYKE---E--LNEKGMIVPWCSQ-VEVLSHEAVGCFV----THCGWNSSLESLVCGVPVVAFPQWTD 389 (470)
Q Consensus 320 ~~~~~~~~~~~~~~~~~---~--~~~nv~v~~~vp~-~~vl~~~~v~~~I----tHGG~gt~~eal~~GvP~v~~P~~~D 389 (470)
...+.+.+ . +.+++.+.++... ..++..+++ +| .-|...++.||+++|+|+|+.+..
T Consensus 251 ---------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~-- 317 (394)
T 2jjm_A 251 ---------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG-- 317 (394)
T ss_dssp ---------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT--
T ss_pred ---------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC--
Confidence 11122222 2 2467777776543 678988998 77 456667899999999999998753
Q ss_pred hhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHH
Q 041902 390 QGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGN 437 (470)
Q Consensus 390 Q~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~ 437 (470)
.....+.+ -+.|..++. -+.+++.++|.++++ |++.+++
T Consensus 318 --~~~e~v~~-~~~g~~~~~-----~d~~~la~~i~~l~~-~~~~~~~ 356 (394)
T 2jjm_A 318 --GIPEVIQH-GDTGYLCEV-----GDTTGVADQAIQLLK-DEELHRN 356 (394)
T ss_dssp --TSTTTCCB-TTTEEEECT-----TCHHHHHHHHHHHHH-CHHHHHH
T ss_pred --ChHHHhhc-CCceEEeCC-----CCHHHHHHHHHHHHc-CHHHHHH
Confidence 23334444 457887764 478999999999999 8764443
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.00 E-value=1.1e-08 Score=99.40 Aligned_cols=126 Identities=14% Similarity=0.104 Sum_probs=81.2
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChh---hhccccc
Q 041902 282 IYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQV---EVLSHEA 358 (470)
Q Consensus 282 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~---~vl~~~~ 358 (470)
+++..|+... ...+..+++++...+.++++ ++.+ ... +.+ ..+.+..++++.+.+++++. .++..++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i-~G~g-~~~-----~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVL-AGPA-WEP-----EYF-DEITRRYGSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEE-ESCC-CCH-----HHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEE-EeCc-ccH-----HHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCC
Confidence 3445677652 23456677777766666554 4544 211 022 23333456899999999875 7898899
Q ss_pred ccccee--c-----------cC-chhhhhhhhcCCcEeeccccchhhHHHHHHHhh-hcceeEeeecCCCCcCHHHHHHH
Q 041902 359 VGCFVT--H-----------CG-WNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDF-CKTGVRVKANEEGILESDEIKRC 423 (470)
Q Consensus 359 v~~~It--H-----------GG-~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~-~GvG~~l~~~~~~~~~~~~l~~~ 423 (470)
+ +|. . -| -.++.||+++|+|+|+.... .....+.+. -+.|..++ . +.+++.++
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~-----~-d~~~l~~~ 301 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTD-----F-APDEARRT 301 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSC-----C-CHHHHHHH
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcC-----C-CHHHHHHH
Confidence 8 663 2 33 35799999999999998753 344444420 13555553 4 89999999
Q ss_pred HHHHhc
Q 041902 424 LELVMG 429 (470)
Q Consensus 424 i~~vl~ 429 (470)
|.++++
T Consensus 302 i~~l~~ 307 (342)
T 2iuy_A 302 LAGLPA 307 (342)
T ss_dssp HHTSCC
T ss_pred HHHHHH
Confidence 999886
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.99 E-value=6.2e-09 Score=102.88 Aligned_cols=319 Identities=11% Similarity=0.086 Sum_probs=165.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchh-hhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHH
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYR-RMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVS 88 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~-~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 88 (470)
..|+++ .+|++-.+.-+.+|.++|.++ +++.++.+....+ .+ ...-. .+|.. +-|+ +.-+. ..+.. ...+.
T Consensus 9 ~~~~~~-v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~-~~~~~-~~~~i-~~~~-~~l~~-~~~~~-~~~~~ 80 (385)
T 4hwg_A 9 MLKVMT-IVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYEL-NQVFF-DDMGI-RKPD-YFLEV-AADNT-AKSIG 80 (385)
T ss_dssp CCEEEE-EECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHH-THHHH-C-CCC-CCCS-EECCC-CCCCS-HHHHH
T ss_pred hhheeE-EEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhH-HHHHH-hhCCC-CCCc-eecCC-CCCCH-HHHHH
Confidence 345544 467777777788888888877 8988887765544 33 21000 22221 1111 11111 11122 22222
Q ss_pred HHHHHhHHHHHHHHHhhhhcCCCCccEEEe--CCCchhHHHHHHHcCCCeEEEechhhHHHHHHHHhhhccCCccccccC
Q 041902 89 EFKRRSSEALTEIITGSENQGAQPFTCLVY--SLLLPWTAEVARAYHLPSALLWIQPALVFDVYYYYFYGYGDLIEEKVN 166 (470)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~--d~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 166 (470)
. +...+.+++++ .+||+|+. |..+.++..+|.++|||++.+..
T Consensus 81 ~----~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea------------------------- 125 (385)
T 4hwg_A 81 L----VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA------------------------- 125 (385)
T ss_dssp H----HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESC-------------------------
T ss_pred H----HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeC-------------------------
Confidence 2 23333444444 46999987 33444558899999999765421
Q ss_pred CcccCCCCCCCCCCCCCCccCCCCCCCchhHHHHHHHHHHHHHHhccCCeEEEcchHhhhHHHHHHhcCCCeeEeccccC
Q 041902 167 DLIELPGLPPLTGWDLPSFMDPRKSNDAYSFILTCFKEQMEAIVEETDPKILVNTFDALEAETLRAIDKFNMIAIGPLVA 246 (470)
Q Consensus 167 ~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~vGpl~~ 246 (470)
++ +..+ ..... ........ .-. +.++.++-..-+.-....++..++.++|....
T Consensus 126 ------gl---rs~~----------~~~pe---e~nR~~~~--~~a--~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~ 179 (385)
T 4hwg_A 126 ------GN---RCFD----------QRVPE---EINRKIID--HIS--DVNITLTEHARRYLIAEGLPAELTFKSGSHMP 179 (385)
T ss_dssp ------CC---CCSC----------TTSTH---HHHHHHHH--HHC--SEEEESSHHHHHHHHHTTCCGGGEEECCCSHH
T ss_pred ------CC---cccc----------ccCcH---HHHHHHHH--hhh--ceeecCCHHHHHHHHHcCCCcCcEEEECCchH
Confidence 11 0000 00000 01111111 123 66667665444432111111124888995432
Q ss_pred CCccCC-cccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCC-HHHHHHHHHHHHhC----CCCEEEEEecCCC
Q 041902 247 SALWDG-KELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLE-KRQVEEIARGLLDS----GHPFLWVIREHEN 320 (470)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~ 320 (470)
+..... ... ...++.+.+.-. +++.|+++.|...... .+.+..+++++... +..+++.. + +
T Consensus 180 D~~~~~~~~~---------~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~--~-p 246 (385)
T 4hwg_A 180 EVLDRFMPKI---------LKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFST--H-P 246 (385)
T ss_dssp HHHHHHHHHH---------HHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEE--C-H
T ss_pred HHHHHhhhhc---------chhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEEC--C-h
Confidence 210000 000 001222223322 3568999888754322 13455666666543 44555533 3 1
Q ss_pred CCCCCCchhhhHHHHHH---h--CCCeEEeeccC---hhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhH
Q 041902 321 KDKDKGEDDVVMKYKEE---L--NEKGMIVPWCS---QVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGT 392 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~---~--~~nv~v~~~vp---~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~ 392 (470)
.....+.+. . .+|+.+++.++ ...+++.+++ +|+-.|. .+.||...|+|+|+++-..+.+.
T Consensus 247 --------~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e 315 (385)
T 4hwg_A 247 --------RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE 315 (385)
T ss_dssp --------HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH
T ss_pred --------HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh
Confidence 222222211 1 25788765554 4678999998 9999875 46999999999999987654333
Q ss_pred HHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHH
Q 041902 393 NAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDE 433 (470)
Q Consensus 393 nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~ 433 (470)
..+ .|.++.+. .+.+.|.+++.++++ |+.
T Consensus 316 ----~v~-~G~~~lv~------~d~~~i~~ai~~ll~-d~~ 344 (385)
T 4hwg_A 316 ----GMD-AGTLIMSG------FKAERVLQAVKTITE-EHD 344 (385)
T ss_dssp ----HHH-HTCCEECC------SSHHHHHHHHHHHHT-TCB
T ss_pred ----hhh-cCceEEcC------CCHHHHHHHHHHHHh-ChH
Confidence 244 68776664 379999999999999 653
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.87 E-value=2.5e-06 Score=84.92 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=73.2
Q ss_pred CCCeEEeeccC------hhhhccccccccceecc----CchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEee
Q 041902 339 NEKGMIVPWCS------QVEVLSHEAVGCFVTHC----GWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVK 408 (470)
Q Consensus 339 ~~nv~v~~~vp------~~~vl~~~~v~~~ItHG----G~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~ 408 (470)
.+++.+.+|++ -..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+.+ -+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC
Confidence 47899988775 2457888888 77654 45689999999999999764 456666665 56777662
Q ss_pred ecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHh
Q 041902 409 ANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDF 466 (470)
Q Consensus 409 ~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l 466 (470)
+.+++.++|.++++ |++.+++..+-+... +...-+.+...+++++-+
T Consensus 365 -------d~~~la~~i~~ll~-~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~ 411 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLK-HPEVSKEMGAKAKER---VRKNFIITKHMERYLDIL 411 (416)
T ss_dssp -------SHHHHHHHHHHHHH-CHHHHHHHHHHHHHH---HHHHTBHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHh-CHHHHHHHHHHHHHH---HHHHcCHHHHHHHHHHHH
Confidence 78999999999999 886544433222221 111245455555555443
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.66 E-value=9.4e-06 Score=87.09 Aligned_cols=87 Identities=22% Similarity=0.294 Sum_probs=59.9
Q ss_pred hCCCeEEeec----cChhhhcc----ccccccceec----cCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhccee
Q 041902 338 LNEKGMIVPW----CSQVEVLS----HEAVGCFVTH----CGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGV 405 (470)
Q Consensus 338 ~~~nv~v~~~----vp~~~vl~----~~~v~~~ItH----GG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~ 405 (470)
+.++|.+.++ +|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |.......+.+ -+.|.
T Consensus 638 L~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gl 710 (816)
T 3s28_A 638 LNGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGF 710 (816)
T ss_dssp CBBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBE
T ss_pred CCCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEE
Confidence 3477888774 44455544 4566 7743 3445899999999999996 44455666665 56788
Q ss_pred EeeecCCCCcCHHHHHHHHHHHh----cCCHHHHHH
Q 041902 406 RVKANEEGILESDEIKRCLELVM----GEGDEFRGN 437 (470)
Q Consensus 406 ~l~~~~~~~~~~~~l~~~i~~vl----~~~~~~r~~ 437 (470)
.+++ -+.+++.++|.+++ . |++.+++
T Consensus 711 lv~p-----~D~e~LA~aI~~lL~~Ll~-d~~~~~~ 740 (816)
T 3s28_A 711 HIDP-----YHGDQAADTLADFFTKCKE-DPSHWDE 740 (816)
T ss_dssp EECT-----TSHHHHHHHHHHHHHHHHH-CTHHHHH
T ss_pred EeCC-----CCHHHHHHHHHHHHHHhcc-CHHHHHH
Confidence 8874 57899999997766 7 7654443
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.52 E-value=5.1e-05 Score=78.73 Aligned_cols=87 Identities=9% Similarity=0.082 Sum_probs=64.8
Q ss_pred CCeEEeeccCh---hhhcccccccccee---ccCchhhhhhhhcCCcEeecccc---chhhHHHHHHHhhhcceeEeeec
Q 041902 340 EKGMIVPWCSQ---VEVLSHEAVGCFVT---HCGWNSSLESLVCGVPVVAFPQW---TDQGTNAKIIVDFCKTGVRVKAN 410 (470)
Q Consensus 340 ~nv~v~~~vp~---~~vl~~~~v~~~It---HGG~gt~~eal~~GvP~v~~P~~---~DQ~~nA~rl~~~~GvG~~l~~~ 410 (470)
++|.+.+++|+ ..++..+|+ +|. .|+..++.||+++|+|+|++|.. .|.. +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~--~~~l~~-~g~~e~v~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVA--GSLNHH-LGLDEMNV-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHH--HHHHHH-HTCGGGBC--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHH--HHHHHH-CCChhhhc--
Confidence 77888999975 456888888 662 26667899999999999997743 2222 445555 67776664
Q ss_pred CCCCcCHHHHHHHHHHHhcCCHHHHHHH
Q 041902 411 EEGILESDEIKRCLELVMGEGDEFRGNS 438 (470)
Q Consensus 411 ~~~~~~~~~l~~~i~~vl~~~~~~r~~a 438 (470)
. +.+++.+++.+++. |++.+++.
T Consensus 507 --~--~~~~la~~i~~l~~-~~~~~~~~ 529 (568)
T 2vsy_A 507 --A--DDAAFVAKAVALAS-DPAALTAL 529 (568)
T ss_dssp --S--SHHHHHHHHHHHHH-CHHHHHHH
T ss_pred --C--CHHHHHHHHHHHhc-CHHHHHHH
Confidence 2 89999999999999 88655543
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.51 E-value=7.9e-05 Score=75.57 Aligned_cols=133 Identities=11% Similarity=0.125 Sum_probs=81.1
Q ss_pred EEEEecccccCC-HHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHH---HHHhCCCeE-EeeccChh---hh
Q 041902 282 IYVAFGTICVLE-KRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKY---KEELNEKGM-IVPWCSQV---EV 353 (470)
Q Consensus 282 V~vs~GS~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~-v~~~vp~~---~v 353 (470)
+++..|+..... .+.+-..+..+...+.++++ ++.+ +. ...+.+ .+..++++. +.++ +.. .+
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~i-vG~g-~~-------~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVV-LGAG-DV-------ALEGALLAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEE-EECB-CH-------HHHHHHHHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEE-EeCC-ch-------HHHHHHHHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 666788876322 22233333333333455444 4433 10 122222 233457887 4577 443 57
Q ss_pred ccccccccceec----cCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhh---------cceeEeeecCCCCcCHHHH
Q 041902 354 LSHEAVGCFVTH----CGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFC---------KTGVRVKANEEGILESDEI 420 (470)
Q Consensus 354 l~~~~v~~~ItH----GG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~---------GvG~~l~~~~~~~~~~~~l 420 (470)
+..+++ +|.- |.-.+++||+++|+|+|+... ......+.+ - +.|..++. -+.+++
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~l 430 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGL 430 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHH
Confidence 888888 7742 334589999999999999754 345555554 3 57888864 578999
Q ss_pred HHHHHHHh---cCCHHHHHH
Q 041902 421 KRCLELVM---GEGDEFRGN 437 (470)
Q Consensus 421 ~~~i~~vl---~~~~~~r~~ 437 (470)
.++|.+++ . |++.+++
T Consensus 431 a~~i~~ll~~~~-~~~~~~~ 449 (485)
T 1rzu_A 431 KQAIRRTVRYYH-DPKLWTQ 449 (485)
T ss_dssp HHHHHHHHHHHT-CHHHHHH
T ss_pred HHHHHHHHHHhC-CHHHHHH
Confidence 99999999 7 7765443
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.41 E-value=2.4e-06 Score=74.44 Aligned_cols=138 Identities=14% Similarity=0.211 Sum_probs=92.8
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCchhhhHHH---HHHhCCCeEEeeccCh---hhhc
Q 041902 282 IYVAFGTICVLEKRQVEEIARGLLDS-GHPFLWVIREHENKDKDKGEDDVVMKY---KEELNEKGMIVPWCSQ---VEVL 354 (470)
Q Consensus 282 V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~v~~~vp~---~~vl 354 (470)
+++..|+... ...+..+++++... +.++++ ++.+ ... . .+.... ...+++|+.+.+|+++ ..++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i-~G~~-~~~-~----~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWF-SKG-D----HAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCC-CTT-S----THHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEE-EecC-ccH-H----HHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 4456777663 23466677777776 455544 4443 211 0 222211 2235679999999997 6789
Q ss_pred ccccccccee---ccCch-hhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcC
Q 041902 355 SHEAVGCFVT---HCGWN-SSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGE 430 (470)
Q Consensus 355 ~~~~v~~~It---HGG~g-t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~ 430 (470)
..+++ +|. +.|.| ++.||+++|+|+|+... ..+...+.+ -+.|..+ . -+.+++.++|.++++
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~-----~d~~~l~~~i~~l~~- 161 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N-----ADVNEIIDAMKKVSK- 161 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C-----SCHHHHHHHHHHHHH-
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C-----CCHHHHHHHHHHHHh-
Confidence 88998 776 33444 89999999999998753 556666765 5678877 4 378999999999999
Q ss_pred CHHH-HHHHHHHH
Q 041902 431 GDEF-RGNSLKWK 442 (470)
Q Consensus 431 ~~~~-r~~a~~~~ 442 (470)
|+.. ++++++.+
T Consensus 162 ~~~~~~~~~~~~a 174 (177)
T 2f9f_A 162 NPDKFKKDCFRRA 174 (177)
T ss_dssp CTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 7754 55555544
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.41 E-value=0.00029 Score=71.33 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=62.0
Q ss_pred HhCCCeE-EeeccCh--hhhccccccccceec----cCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhh--------
Q 041902 337 ELNEKGM-IVPWCSQ--VEVLSHEAVGCFVTH----CGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFC-------- 401 (470)
Q Consensus 337 ~~~~nv~-v~~~vp~--~~vl~~~~v~~~ItH----GG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~-------- 401 (470)
..++++. +.++... ..++..+++ +|.- |.-.++.||+++|+|+|+... ......+.+ -
T Consensus 344 ~~~~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~ 416 (485)
T 2qzs_A 344 EYPGQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADG 416 (485)
T ss_dssp HSTTTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTT
T ss_pred hCCCcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Ccccccccc
Confidence 3457886 5677322 357888888 7743 334578899999999999754 345555554 3
Q ss_pred -cceeEeeecCCCCcCHHHHHHHHHHHh---cCCHHHHHH
Q 041902 402 -KTGVRVKANEEGILESDEIKRCLELVM---GEGDEFRGN 437 (470)
Q Consensus 402 -GvG~~l~~~~~~~~~~~~l~~~i~~vl---~~~~~~r~~ 437 (470)
+.|..++. -+.+++.++|.+++ . |++.+++
T Consensus 417 ~~~G~l~~~-----~d~~~la~~i~~ll~~~~-~~~~~~~ 450 (485)
T 2qzs_A 417 VASGFVFED-----SNAWSLLRAIRRAFVLWS-RPSLWRF 450 (485)
T ss_dssp CCCBEEECS-----SSHHHHHHHHHHHHHHHT-SHHHHHH
T ss_pred ccceEEECC-----CCHHHHHHHHHHHHHHcC-CHHHHHH
Confidence 57888864 57899999999999 7 7765443
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.37 E-value=8.2e-05 Score=73.70 Aligned_cols=105 Identities=13% Similarity=0.081 Sum_probs=66.6
Q ss_pred eEEeeccCh---hhhcccccccccee----ccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcc-----------
Q 041902 342 GMIVPWCSQ---VEVLSHEAVGCFVT----HCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKT----------- 403 (470)
Q Consensus 342 v~v~~~vp~---~~vl~~~~v~~~It----HGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~Gv----------- 403 (470)
+.+.+|+|+ ..++..+++ +|. -|...++.||+++|+|+|+... ......+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHcc--Ccccccccccccc
Confidence 555699984 457888888 664 2334589999999999998653 344444443 33
Q ss_pred -----ee--EeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 041902 404 -----GV--RVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVD 464 (470)
Q Consensus 404 -----G~--~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (470)
|. .+.. -+.+++.++| +++. |++.+++..+ ..++.+...-+.+....++++
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~-~~~~~~~~~~---~a~~~~~~~fs~~~~~~~~~~ 385 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFK-DEKNRKEYGK---RVQDFVKTKPTWDDISSDIID 385 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTT-SHHHHHHHHH---HHHHHHTTSCCHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhc-CHHHHHHHHH---HHHHHHHHhCCHHHHHHHHHH
Confidence 55 5553 4899999999 9999 8865443333 222222233455555444443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.30 E-value=7.2e-05 Score=74.28 Aligned_cols=77 Identities=9% Similarity=0.048 Sum_probs=59.4
Q ss_pred hCCCeEEeeccChh---hhcccccccccee---ccCc-hhhhhhh-------hcCCcEeeccccchhhHHHHHHHhhhcc
Q 041902 338 LNEKGMIVPWCSQV---EVLSHEAVGCFVT---HCGW-NSSLESL-------VCGVPVVAFPQWTDQGTNAKIIVDFCKT 403 (470)
Q Consensus 338 ~~~nv~v~~~vp~~---~vl~~~~v~~~It---HGG~-gt~~eal-------~~GvP~v~~P~~~DQ~~nA~rl~~~~Gv 403 (470)
+.+||.+.+++|+. .+++.+++ +|. +.|. .++.||+ ++|+|+|+... +.+ -..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-Ccc
Confidence 45889999999864 47888888 663 3344 4678999 99999999865 554 456
Q ss_pred eeE-eeecCCCCcCHHHHHHHHHHHhcCCHH
Q 041902 404 GVR-VKANEEGILESDEIKRCLELVMGEGDE 433 (470)
Q Consensus 404 G~~-l~~~~~~~~~~~~l~~~i~~vl~~~~~ 433 (470)
|.. +.. -+.++|.++|.++++ ++.
T Consensus 330 G~l~v~~-----~d~~~la~ai~~ll~-~~~ 354 (406)
T 2hy7_A 330 SRFGYTP-----GNADSVIAAITQALE-APR 354 (406)
T ss_dssp SEEEECT-----TCHHHHHHHHHHHHH-CCC
T ss_pred eEEEeCC-----CCHHHHHHHHHHHHh-Ccc
Confidence 877 653 578999999999999 664
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.10 E-value=0.00099 Score=65.19 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=67.1
Q ss_pred CeEEeeccC-hhhhccccccccceec-----cCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCC
Q 041902 341 KGMIVPWCS-QVEVLSHEAVGCFVTH-----CGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGI 414 (470)
Q Consensus 341 nv~v~~~vp-~~~vl~~~~v~~~ItH-----GG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~ 414 (470)
++.+.++.. -..+++.+++ ++.- +|..++.||+++|+|+|+-|...+.+.....+.+ .|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEeC------
Confidence 455555543 3668888887 6542 2347899999999999988877777777776665 67766553
Q ss_pred cCHHHHHHHHHHHhcCCH---HHHHHHHHHHHH
Q 041902 415 LESDEIKRCLELVMGEGD---EFRGNSLKWKDL 444 (470)
Q Consensus 415 ~~~~~l~~~i~~vl~~~~---~~r~~a~~~~~~ 444 (470)
+.++|.+++.++++ |. .+.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~-d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLS-VKKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHH-SCCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHh
Confidence 67999999999998 62 466666665544
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.67 E-value=0.0032 Score=60.94 Aligned_cols=106 Identities=10% Similarity=0.057 Sum_probs=76.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchhhhcCCCCCCCCce-EEEcCCCCCCCCCCCCCCch
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIFAYRRMANSPTPEDGLS-FASFSDGYDDGFNSKQNDPR 84 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~~~~~v~~~~~~~~g~~-~~~i~~~~~~~~~~~~~~~~ 84 (470)
-..+|||++...+.|++.=..++.+.|+++ +.+|++++.+.+.+.+ +.. ++++ ++.++..- .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~-~~~---p~vd~vi~~~~~~-----------~ 70 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVM-EYN---PNIDELIVVDKKG-----------R 70 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGT-SSC---TTCSEEEEECCSS-----------H
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH-hcC---CCccEEEEeCccc-----------c
Confidence 455799999999999999999999999997 8999999999999888 542 4554 55554210 1
Q ss_pred hhHHHHHHHhHHHHHHHHHhhhhcCCCCc-cEEEeCCCchhHHHHHHHcCCCeEE
Q 041902 85 RYVSEFKRRSSEALTEIITGSENQGAQPF-TCLVYSLLLPWTAEVARAYHLPSAL 138 (470)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p-Dlvv~d~~~~~~~~~A~~~giP~i~ 138 (470)
... ...+.++++.+++ .++ |++|.-....-...++...|+|..+
T Consensus 71 --~~~-----~~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 --HNS-----ISGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --HHH-----HHHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --ccc-----HHHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 001 1122345556655 359 9999765555567788889999765
No 49
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.56 E-value=0.014 Score=56.02 Aligned_cols=103 Identities=9% Similarity=-0.027 Sum_probs=70.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchhhhcCCCCCCCCc-eEEEcCCCCCCCCCCCCCCchhhH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIFAYRRMANSPTPEDGL-SFASFSDGYDDGFNSKQNDPRRYV 87 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~~~~~v~~~~~~~~g~-~~~~i~~~~~~~~~~~~~~~~~~~ 87 (470)
||||++...+.|++.=..++.+.|+++ +.+|++++.+.+.+.+ +.. +++ +++.++.. . . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~-~~~---p~i~~v~~~~~~--~-------~-~~-- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL-SRM---PEVNEAIPMPLG--H-------G-AL-- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH-TTC---TTEEEEEEC-------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH-hcC---CccCEEEEecCC--c-------c-cc--
Confidence 799999999999999899999999997 9999999999888887 542 345 34555321 0 0 00
Q ss_pred HHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEE
Q 041902 88 SEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSAL 138 (470)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~ 138 (470)
....+.++.+.+++ .+||++|.-....-...++...|+|...
T Consensus 65 ------~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 ------EIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ------chHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 01223456666665 5699998433334566788889999754
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.49 E-value=0.0012 Score=56.15 Aligned_cols=135 Identities=12% Similarity=0.191 Sum_probs=80.3
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCC--CCE-EEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChh---hh
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSG--HPF-LWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQV---EV 353 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~---~v 353 (470)
+++++..|+... ...+..+++++.... .++ +++++.+ ... +.+ ..+.+..+-++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g-~~~-----~~~-~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKG-PDE-----KKI-KLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCS-TTH-----HHH-HHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCC-ccH-----HHH-HHHHHHcCCeEEE-eecCHHHHHHH
Confidence 467778888763 234666777776653 233 3334433 111 011 1222234457777 999864 57
Q ss_pred cccccccccee----ccCchhhhhhhhcCC-cEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHh
Q 041902 354 LSHEAVGCFVT----HCGWNSSLESLVCGV-PVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVM 428 (470)
Q Consensus 354 l~~~~v~~~It----HGG~gt~~eal~~Gv-P~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl 428 (470)
+..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+ -+. .+. .-+.+++.+++.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~-~~~--~~~-----~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALD-ERS--LFE-----PNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSS-GGG--EEC-----TTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccC-Cce--EEc-----CCCHHHHHHHHHHHH
Confidence 888998 775 234458999999996 999943221 11112222 222 333 358999999999999
Q ss_pred cCCHHHHHHH
Q 041902 429 GEGDEFRGNS 438 (470)
Q Consensus 429 ~~~~~~r~~a 438 (470)
+ +++.+++.
T Consensus 139 ~-~~~~~~~~ 147 (166)
T 3qhp_A 139 E-NKLERERM 147 (166)
T ss_dssp H-CHHHHHHH
T ss_pred h-CHHHHHHH
Confidence 9 88644433
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.44 E-value=0.0025 Score=65.58 Aligned_cols=146 Identities=11% Similarity=-0.008 Sum_probs=96.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEE--ecCCCCCCCCCchhhhHHHH-HHhCCCeEEeeccChhh---
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVI--REHENKDKDKGEDDVVMKYK-EELNEKGMIVPWCSQVE--- 352 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~nv~v~~~vp~~~--- 352 (470)
..++|.+|++.....++.+......+...+..++|.. +.. ... ...+-..+. .-+.+++.+.+.+|..+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~-~g~----~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS-NGI----THPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC-CGG----GHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC-chh----hHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 3689999998888888888888888888766666643 322 100 001111221 13557787778888654
Q ss_pred hcccccccccee---ccCchhhhhhhhcCCcEeeccccch-hhHHHHHHHhhhcceeE-eeecCCCCcCHHHHHHHHHHH
Q 041902 353 VLSHEAVGCFVT---HCGWNSSLESLVCGVPVVAFPQWTD-QGTNAKIIVDFCKTGVR-VKANEEGILESDEIKRCLELV 427 (470)
Q Consensus 353 vl~~~~v~~~It---HGG~gt~~eal~~GvP~v~~P~~~D-Q~~nA~rl~~~~GvG~~-l~~~~~~~~~~~~l~~~i~~v 427 (470)
.+..+|+ ++. .+|..|++|||+.|||+|.++...= -..-+..+.. .|+... +. -+.++..+...++
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~L 585 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRL 585 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHH
Confidence 4477887 543 3788999999999999999985431 2222334555 677653 44 3688888999999
Q ss_pred hcCCHHHHHHHH
Q 041902 428 MGEGDEFRGNSL 439 (470)
Q Consensus 428 l~~~~~~r~~a~ 439 (470)
.+ |++.+++.+
T Consensus 586 a~-D~~~l~~LR 596 (631)
T 3q3e_A 586 AE-NHQERLELR 596 (631)
T ss_dssp HH-CHHHHHHHH
T ss_pred hC-CHHHHHHHH
Confidence 99 886555443
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.16 E-value=0.011 Score=62.81 Aligned_cols=146 Identities=14% Similarity=0.188 Sum_probs=98.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHH-h-CCCeEEeeccChh---h
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEE-L-NEKGMIVPWCSQV---E 352 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~nv~v~~~vp~~---~ 352 (470)
+..+||.+|-+....+++.+..-...|+..+.-.+|..... ... ...+...+.+. + ++++.+.+..|.. .
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~-~~~----~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP-AVG----EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT-GGG----HHHHHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc-HHH----HHHHHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 44599999999888899999999999999877788887755 211 00122222111 2 3667777777754 4
Q ss_pred hcccccccccee---ccCchhhhhhhhcCCcEeeccccc-hhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHh
Q 041902 353 VLSHEAVGCFVT---HCGWNSSLESLVCGVPVVAFPQWT-DQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVM 428 (470)
Q Consensus 353 vl~~~~v~~~It---HGG~gt~~eal~~GvP~v~~P~~~-DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl 428 (470)
.+..+|+ ++- .+|..|++|||+.|||+|.++-.. =-..-+..+.. +|+...+. -+.++-.+...++-
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia------~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA------KNRQEYEDIAVKLG 666 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC------SSHHHHHHHHHHHH
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc------CCHHHHHHHHHHHh
Confidence 5566776 654 899999999999999999999432 23334455565 77776664 36666666666666
Q ss_pred cCCHHHHHHH
Q 041902 429 GEGDEFRGNS 438 (470)
Q Consensus 429 ~~~~~~r~~a 438 (470)
+ |++.+++.
T Consensus 667 ~-d~~~l~~l 675 (723)
T 4gyw_A 667 T-DLEYLKKV 675 (723)
T ss_dssp H-CHHHHHHH
T ss_pred c-CHHHHHHH
Confidence 6 66544443
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.16 E-value=0.0075 Score=52.69 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=58.5
Q ss_pred CeEE-eeccCh---hhhccccccccceecc---C-chhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCC
Q 041902 341 KGMI-VPWCSQ---VEVLSHEAVGCFVTHC---G-WNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEE 412 (470)
Q Consensus 341 nv~v-~~~vp~---~~vl~~~~v~~~ItHG---G-~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~ 412 (470)
++.+ .+++++ ..++..+++ +|... | ..++.||+++|+|+|+... ......+ + -+.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC---
Confidence 8999 899985 468888998 66432 3 4678999999999988754 3445555 5 577888864
Q ss_pred CCcCHHHHHHHHHHHhc
Q 041902 413 GILESDEIKRCLELVMG 429 (470)
Q Consensus 413 ~~~~~~~l~~~i~~vl~ 429 (470)
-+.+++.++|.++++
T Consensus 165 --~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 165 --GDPGELANAILKALE 179 (200)
T ss_dssp --TCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHh
Confidence 478999999999986
No 54
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.61 E-value=0.086 Score=50.00 Aligned_cols=43 Identities=12% Similarity=0.070 Sum_probs=40.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCccchhhh
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~~~~~v 53 (470)
||||++...+.|++.=..++.++|+++ +.+|++++.+.+.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 799999999999999999999999997 8999999999998888
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.49 E-value=0.0042 Score=59.72 Aligned_cols=108 Identities=18% Similarity=0.143 Sum_probs=76.8
Q ss_pred CeEEeeccChhhh---ccccccccceeccCch---------hhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEee
Q 041902 341 KGMIVPWCSQVEV---LSHEAVGCFVTHCGWN---------SSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVK 408 (470)
Q Consensus 341 nv~v~~~vp~~~v---l~~~~v~~~ItHGG~g---------t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~ 408 (470)
||...+|+|+.++ +..++.+++..-+..| -+.|+|++|+|+|+.+ ...++..+++ .|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 9999999999775 4455665444233222 4789999999999754 5677888888 89999885
Q ss_pred ecCCCCcCHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 041902 409 ANEEGILESDEIKRCLELVMGEGD--EFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDD 465 (470)
Q Consensus 409 ~~~~~~~~~~~l~~~i~~vl~~~~--~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (470)
+.+++.+++..+.. +. ++++++++.+++++. +.-...++.+.+..
T Consensus 290 -------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 36888888888765 33 688899998888764 34444455444443
No 56
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=94.60 E-value=0.11 Score=47.08 Aligned_cols=47 Identities=13% Similarity=-0.036 Sum_probs=32.2
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+..+++||||+.-=-+. |.--+..|+++|++ +|+|+++.+...+.-.
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 45677799888765544 55557788999987 8999999988766554
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.35 E-value=0.052 Score=53.59 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=57.9
Q ss_pred CCCeEEeeccChh---hhccccccccceecc---Cch-hhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecC
Q 041902 339 NEKGMIVPWCSQV---EVLSHEAVGCFVTHC---GWN-SSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANE 411 (470)
Q Consensus 339 ~~nv~v~~~vp~~---~vl~~~~v~~~ItHG---G~g-t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~ 411 (470)
..++...+++|+. .++..+++ ||.-. |.| ++.||+++|+|+|+ -..+ ....+.+ -..|+.+++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCC--
Confidence 3678888999764 47888888 66422 444 57999999999998 3222 1233443 346777764
Q ss_pred CCCcCHHHHHHHHHHHhcCCHHHHHH
Q 041902 412 EGILESDEIKRCLELVMGEGDEFRGN 437 (470)
Q Consensus 412 ~~~~~~~~l~~~i~~vl~~~~~~r~~ 437 (470)
-+.++|.++|.++++ |++.+++
T Consensus 364 ---~d~~~la~ai~~ll~-~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCM-SFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHH-HTC----
T ss_pred ---CCHHHHHHHHHHHHc-CHHHHHH
Confidence 588999999999999 7765554
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.08 E-value=0.05 Score=55.74 Aligned_cols=137 Identities=12% Similarity=0.151 Sum_probs=76.2
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHHh---CCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChh--
Q 041902 277 PKSSVIYVAFGTICVLEKRQVEEIARGLLD---SGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQV-- 351 (470)
Q Consensus 277 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~-- 351 (470)
++.|+| +..|..... ..+..+++++.. .+.++++ ++.+ +.. ....-.......+.++.+....+..
T Consensus 325 ~~~p~i-~~vgRl~~~--Kg~~~li~a~~~l~~~~~~l~l-~G~G-~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 325 RKIPLI-AFIGRLEEQ--KGPDVMAAAIPELMQEDVQIVL-LGTG-KKK----FEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp TTSCEE-EEECCBSGG--GCHHHHHHHHHHHTTSSCEEEE-ECCB-CHH----HHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred CCCcEE-EEEeecccc--CChHHHHHHHHHhHhhCCeEEE-Eecc-Cch----HHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 344444 456776532 234445555544 4455544 3333 111 0011112233567888888777653
Q ss_pred -hhccccccccceec---cCch-hhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecC--C---CCcCHHHHH
Q 041902 352 -EVLSHEAVGCFVTH---CGWN-SSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANE--E---GILESDEIK 421 (470)
Q Consensus 352 -~vl~~~~v~~~ItH---GG~g-t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~--~---~~~~~~~l~ 421 (470)
.+++.+++ ||.- =|.| +++||+++|+|.|+... ......|.+ -.-|....... . ...+.+.|.
T Consensus 396 ~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~d-g~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 396 HLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIE-GKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCB-TTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeC-CCCccccccCCCceeEECCCCHHHHH
Confidence 46778888 7753 2444 88999999999998754 344445554 33454333210 0 123568899
Q ss_pred HHHHHHhc
Q 041902 422 RCLELVMG 429 (470)
Q Consensus 422 ~~i~~vl~ 429 (470)
++|+++|.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988774
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.31 E-value=1.1 Score=45.75 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=29.3
Q ss_pred ccccCCCCEEEEEcC--------CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 4 EQHRQHQPHFLLVTF--------PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 4 ~~~~~~~~~il~~~~--------~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+.+..++|||||++. |+.|++ .-.|+++|+++||+|+++++.
T Consensus 3 ~~~~~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 3 HHHHHHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -----CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEEC
T ss_pred cccCCCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecC
Confidence 456788999999974 333344 457899999999999999854
No 60
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.66 E-value=2.5 Score=38.11 Aligned_cols=113 Identities=15% Similarity=0.073 Sum_probs=62.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEF 90 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
||||+.-=-+. |.--+..|+++|++.| +|+++.+...+.-+..++....-+++..+..... ..-.+.+ ..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTP-aD----- 71 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTP-AD----- 71 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCH-HH-----
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCH-HH-----
Confidence 88887665443 4555788999999998 9999998876665523222112344444432210 0001111 11
Q ss_pred HHHhHHHHHHHHHhhhhcCCCCccEEEeC----------CCch---hHHHHHHHcCCCeEEEec
Q 041902 91 KRRSSEALTEIITGSENQGAQPFTCLVYS----------LLLP---WTAEVARAYHLPSALLWI 141 (470)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~pDlvv~d----------~~~~---~~~~~A~~~giP~i~~~~ 141 (470)
++.--+..+... .+||+||+. .+++ +++.-|..+|||.|.++.
T Consensus 72 ------CV~lal~~l~~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 72 ------CVHLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ------HHHHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------HHHHHHHHhcCC--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 111112222211 369999983 2233 334445679999999865
No 61
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.82 E-value=4.7 Score=34.90 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=64.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc------hhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCch
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA------YRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPR 84 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~------~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 84 (470)
-.|++++..+.|-..-.+.+|.+...+|++|.|+..-.. ...+ +. .++.+.....++.. . .
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l-~~----L~v~~~~~g~gf~~----~----~ 95 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLL-EP----HGVEFQVMATGFTW----E----T 95 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHH-GG----GTCEEEECCTTCCC----C----G
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHH-Hh----CCcEEEEccccccc----C----C
Confidence 478999999999999999999999999999999954332 1234 55 45777777654331 1 1
Q ss_pred hhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc
Q 041902 85 RYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL 122 (470)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~ 122 (470)
.....-.......+....+.+.+ .++|+||.|-..
T Consensus 96 ~~~~~~~~~a~~~l~~a~~~l~~---~~yDlvILDEi~ 130 (196)
T 1g5t_A 96 QNREADTAACMAVWQHGKRMLAD---PLLDMVVLDELT 130 (196)
T ss_dssp GGHHHHHHHHHHHHHHHHHHTTC---TTCSEEEEETHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHhc---CCCCEEEEeCCC
Confidence 11122233345555555555544 469999999653
No 62
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=87.68 E-value=0.76 Score=40.38 Aligned_cols=46 Identities=22% Similarity=0.142 Sum_probs=40.7
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
|.+++||++..+|+.|-.. ...|.+.|+++|++|.++.++.....+
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 3456799999999988777 889999999999999999999888877
No 63
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=87.63 E-value=3.1 Score=37.42 Aligned_cols=114 Identities=12% Similarity=-0.013 Sum_probs=61.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEF 90 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
||||+.-=-+. |.--+..|+++|++.| +|+++.+...+.-+..++.....+++..++.+ .. . ..+ .
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~--~~------~-~~~---~ 66 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFIS--ER------V-VAY---S 66 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCS--SS------E-EEE---E
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC--CC------C-ceE---E
Confidence 67776654333 4444778999999988 89999888766554232221123455555322 00 0 000 0
Q ss_pred HHHhHH-HHHHHHHhhhhcCCCCccEEEeC----------CCch---hHHHHHHHcCCCeEEEec
Q 041902 91 KRRSSE-ALTEIITGSENQGAQPFTCLVYS----------LLLP---WTAEVARAYHLPSALLWI 141 (470)
Q Consensus 91 ~~~~~~-~~~~~~~~l~~~~~~~pDlvv~d----------~~~~---~~~~~A~~~giP~i~~~~ 141 (470)
...+.. ++.--+..+.. .+||+||+. .+++ +++.-|..+|||.|.++.
T Consensus 67 v~GTPaDCV~lal~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 67 TTGTPADCVKLAYNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ESSCHHHHHHHHHHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ECCcHHHHHHHHHHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 111111 11112223322 469999983 2223 344445669999999865
No 64
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=87.00 E-value=10 Score=37.81 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=67.4
Q ss_pred eEE-eeccChh---hhcccccccccee---ccCch-hhhhhhhcCC-----cEeeccccchhhHHHHHHHhhhcceeEee
Q 041902 342 GMI-VPWCSQV---EVLSHEAVGCFVT---HCGWN-SSLESLVCGV-----PVVAFPQWTDQGTNAKIIVDFCKTGVRVK 408 (470)
Q Consensus 342 v~v-~~~vp~~---~vl~~~~v~~~It---HGG~g-t~~eal~~Gv-----P~v~~P~~~DQ~~nA~rl~~~~GvG~~l~ 408 (470)
+.. .+++++. .++..+++ ||. .=|+| ++.||+++|+ |.|+--+.+--.. +.-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEEC
Confidence 443 4778765 46778888 664 34665 7899999998 6666543321111 22356665
Q ss_pred ecCCCCcCHHHHHHHHHHHhcCCH-H-HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhhc
Q 041902 409 ANEEGILESDEIKRCLELVMGEGD-E-FRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFGT 468 (470)
Q Consensus 409 ~~~~~~~~~~~l~~~i~~vl~~~~-~-~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 468 (470)
+ .+.+++.++|.++|+ ++ . -++..++.++.+++ .+......++++.+..
T Consensus 403 p-----~d~~~lA~ai~~lL~-~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALT-MSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQ 453 (482)
T ss_dssp T-----TCHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHh
Confidence 4 678999999999998 53 2 33444444444432 5666777777777653
No 65
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=86.75 E-value=3.3 Score=38.03 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=61.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEF 90 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
||||+.-=-+. +.--+..|+++|++.| +|+++.+...+.-+..++.....+++..++.+ . . ..+ .
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~---~------~-~~~---~ 65 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLC---G------F-RAI---A 65 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECS---S------S-EEE---E
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC---C------C-ceE---E
Confidence 67776654333 4444778999999988 99999988766655233221123444444321 0 0 000 0
Q ss_pred HHHhHH-HHHHHHHhhhhcCCCCccEEEeC-----------CCch---hHHHHHHHcCCCeEEEech
Q 041902 91 KRRSSE-ALTEIITGSENQGAQPFTCLVYS-----------LLLP---WTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 91 ~~~~~~-~~~~~~~~l~~~~~~~pDlvv~d-----------~~~~---~~~~~A~~~giP~i~~~~~ 142 (470)
...+.. ++.--+..+ . .+||+||+. .+++ +++.-|..+|||.|.++..
T Consensus 66 v~GTPaDCV~lal~~l-~---~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 66 TSGTPSDTVYLATFGL-G---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ESSCHHHHHHHHHHHH-T---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ECCcHHHHHHHHHhcC-C---CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 011111 111112223 2 469999983 2222 3344456699999999763
No 66
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=86.68 E-value=7.6 Score=38.84 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=72.4
Q ss_pred CeEEeeccCh---hhhcccccccccee---ccCchh-hhhhhhcC---CcEeeccccchhhHHHHHHHhhhc-ceeEeee
Q 041902 341 KGMIVPWCSQ---VEVLSHEAVGCFVT---HCGWNS-SLESLVCG---VPVVAFPQWTDQGTNAKIIVDFCK-TGVRVKA 409 (470)
Q Consensus 341 nv~v~~~vp~---~~vl~~~~v~~~It---HGG~gt-~~eal~~G---vP~v~~P~~~DQ~~nA~rl~~~~G-vG~~l~~ 409 (470)
.|.....+|+ ..++..+++ +|. .-|+|. ..||+++| .|.|+--+.+ .+.- +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~----l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEV----LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHH----HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHH----hCCCEEEECC
Confidence 5666677776 457777888 553 468885 58999986 6665554333 1221 32 3777775
Q ss_pred cCCCCcCHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhhc
Q 041902 410 NEEGILESDEIKRCLELVMGEGD--EFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFGT 468 (470)
Q Consensus 410 ~~~~~~~~~~l~~~i~~vl~~~~--~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 468 (470)
.+.+++.++|.++|+ ++ +-+++.+++.+.+. ..+...-.++|+++|..
T Consensus 423 -----~D~~~lA~AI~~aL~-m~~~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALA-AGPRQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----TBHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 689999999999998 55 34555555555554 37777888888888753
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.64 E-value=0.45 Score=46.80 Aligned_cols=42 Identities=17% Similarity=0.079 Sum_probs=33.0
Q ss_pred cCCCCEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 7 RQHQPHFLLVTFPAQ-----GHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 7 ~~~~~~il~~~~~~~-----GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
..++|||++++.... |=...+..+|++|+++||+|++++...
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 457799998886422 433568999999999999999999764
No 68
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=84.90 E-value=5.6 Score=35.70 Aligned_cols=58 Identities=12% Similarity=-0.024 Sum_probs=36.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSD 70 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~ 70 (470)
||||+.-=-+. |.--+..|+++|++.| +|+++.+...+.-+..++.....+++..++.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~ 58 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPS 58 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEecc
Confidence 67776654433 4444778999999988 8999988776654422222113466666643
No 69
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=84.32 E-value=7 Score=35.27 Aligned_cols=42 Identities=17% Similarity=0.050 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
.||||+.-=-+. |.--+..|+++|++.| +|+++.+...+.-+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~ 42 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA 42 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc
Confidence 378877655443 4445778899998886 99999988766555
No 70
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=82.90 E-value=1.4 Score=38.19 Aligned_cols=42 Identities=12% Similarity=0.140 Sum_probs=37.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCccchhhh
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRI-GTRVTFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~-Gh~V~~~~~~~~~~~v 53 (470)
|||++..+|+.|-.. ...+.+.|+++ |++|.++.++...+.+
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 689999999987765 99999999999 9999999999888777
No 71
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=82.70 E-value=13 Score=31.47 Aligned_cols=134 Identities=11% Similarity=0.113 Sum_probs=71.7
Q ss_pred hHHHHhhccCCCCceEEEEecc-cccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEe
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGT-ICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIV 345 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~ 345 (470)
.++..+|.+++ ...||-|. .. ......++....+-.+|-+++.. .. ..+... + ....++
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-~~-------~~~~~~---~-~~~i~~ 94 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-DT-------SEISDA---V-DIPIVT 94 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC-------------CCTT---C-SEEEEC
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-hh-------hhhccC---C-ceeEEc
Confidence 56777777653 55566665 44 23445556666677787777533 11 111000 1 223445
Q ss_pred eccCh-hhhccccccccceeccCchhhhh---hhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHH
Q 041902 346 PWCSQ-VEVLSHEAVGCFVTHCGWNSSLE---SLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIK 421 (470)
Q Consensus 346 ~~vp~-~~vl~~~~v~~~ItHGG~gt~~e---al~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~ 421 (470)
...+. ..++..-+-+.++--||.||.-| ++.+++|++++|.+. .....+.+ .-.....- .-+.+++.
T Consensus 95 ~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~-~~~~~i~~-----~~~~~e~~ 165 (176)
T 2iz6_A 95 GLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTS-LDAGLVHV-----AADVAGAI 165 (176)
T ss_dssp CCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHH-HCTTTEEE-----ESSHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCCh-hhcCeEEE-----cCCHHHHH
Confidence 66655 33443333345677899998654 577999999999832 11112222 11212221 23678887
Q ss_pred HHHHHHhc
Q 041902 422 RCLELVMG 429 (470)
Q Consensus 422 ~~i~~vl~ 429 (470)
+.+.+.+.
T Consensus 166 ~~l~~~~~ 173 (176)
T 2iz6_A 166 AAVKQLLA 173 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 72
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=80.19 E-value=4.7 Score=38.05 Aligned_cols=107 Identities=11% Similarity=0.012 Sum_probs=56.8
Q ss_pred ccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC-c-------cchhhhcCCCCCCCCceEEEcCCCCCCC
Q 041902 4 EQHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT-I-------FAYRRMANSPTPEDGLSFASFSDGYDDG 75 (470)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~-~-------~~~~~v~~~~~~~~g~~~~~i~~~~~~~ 75 (470)
+|+++.+|||+|+. --+-...+.++|.+.||+|..+.+ + ...+.. ++ .|+.++..+. +..
T Consensus 16 ~~~~~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A-~~----~gIpv~~~~~-~~~- 83 (329)
T 2bw0_A 16 ENLYFQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEA-EK----DGVPVFKYSR-WRA- 83 (329)
T ss_dssp -----CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHH-HH----HTCCEEECSC-CEE-
T ss_pred ccccCCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHH-HH----cCCCEEecCc-ccc-
Confidence 46777789999992 122233466888899999987765 2 122223 33 5777766542 100
Q ss_pred CCCCCCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEechh
Q 041902 76 FNSKQNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQP 143 (470)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~~ 143 (470)
. . ...+ ++++.+++ .+||++|+-.+. .....+-......++-++++.
T Consensus 84 ----~---~--------~~~~---~~~~~l~~---~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 84 ----K---G--------QALP---DVVAKYQA---LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp ----T---T--------EECH---HHHHHHHT---TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ----c---c--------cccH---HHHHHHHh---cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 0 0 0011 22333333 569999987553 334445455556678777654
No 73
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=79.93 E-value=3.9 Score=33.29 Aligned_cols=47 Identities=26% Similarity=0.259 Sum_probs=34.8
Q ss_pred cCCCCEEEEEcC-CCccCHHH-HHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 7 RQHQPHFLLVTF-PAQGHINP-ALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 7 ~~~~~~il~~~~-~~~GH~~P-~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
++..||+|++-. |-.-=..| .+=++..|+++||+|++++++...+.+
T Consensus 3 ~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 3 TESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp ---CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred cccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 456688866644 54444444 678899999999999999999999888
No 74
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=79.58 E-value=2.6 Score=35.83 Aligned_cols=42 Identities=12% Similarity=0.035 Sum_probs=37.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+||++..+|+.|=.. ...+.+.|+++|++|.++.++...+.+
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 699999999977664 889999999999999999999887777
No 75
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=79.29 E-value=8.9 Score=35.94 Aligned_cols=37 Identities=8% Similarity=0.032 Sum_probs=24.7
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 6 HRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.|+++|||+|+-++..+ ....++|.++||+|..+.+.
T Consensus 3 ~m~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 3 AMSQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp ----CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECC
T ss_pred ccccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcC
Confidence 46778999999776433 34457788889999877663
No 76
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=78.63 E-value=2.8 Score=36.73 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=37.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+++||++..+|+.+-+. ...|.+.|+++| +|.++.++...+.+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 45699999999998765 899999999999 99999999888877
No 77
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=77.78 E-value=6.8 Score=33.51 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=30.4
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
||++.+.. |+-|-..=...||..|+++|++|.++-.+
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 56655543 77889999999999999999999999654
No 78
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=77.30 E-value=13 Score=33.43 Aligned_cols=40 Identities=30% Similarity=0.443 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 11 PHFLLVTFPAQGHINP-ALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P-~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+|||+.- -.|--.| +..|+++|.+.| +|+++.+...+.-+
T Consensus 2 p~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~ 42 (251)
T 2wqk_A 2 PTFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCccc
Confidence 3565543 3343444 678899999998 58888877655544
No 79
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.41 E-value=2.4 Score=36.87 Aligned_cols=44 Identities=18% Similarity=0.067 Sum_probs=37.6
Q ss_pred CCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 9 HQPHFLLVTFPAQGHIN-PALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~-P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+++||++.-+|+ +... -.+.+.+.|+++|++|.++.++...+.+
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 456999999998 4455 7999999999999999999998887777
No 80
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=76.09 E-value=4.2 Score=35.00 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=37.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+||++..+|+.|-. -...+.++|+++|++|.++.++...+.+
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i 43 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVL 43 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHh
Confidence 48999999999854 6899999999999999999999988887
No 81
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=76.03 E-value=4.2 Score=32.91 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=34.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+.+|++.+.++.+|-....-++..|..+|++|...+..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 46899999999999999999999999999999987654
No 82
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=75.90 E-value=29 Score=29.79 Aligned_cols=112 Identities=11% Similarity=0.040 Sum_probs=67.4
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCC---------CCCCCC------CCCc--h
Q 041902 22 GHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYD---------DGFNSK------QNDP--R 84 (470)
Q Consensus 22 GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~---------~~~~~~------~~~~--~ 84 (470)
|.+.-.+.+|+++ ..|.+|.+.. ..+...+.+. .++..+.++-... ...... .+.. .
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISR-Ggta~~lr~~----~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~ 109 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISR-GATSDYIKKS----VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDK 109 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEE-HHHHHHHHTT----CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEEC-ChHHHHHHHh----CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHH
Confidence 5677788899999 8898865554 4444444244 4577776642100 000000 1110 1
Q ss_pred hhHHHHHHH--------hHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEechhhH
Q 041902 85 RYVSEFKRR--------SSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWIQPAL 145 (470)
Q Consensus 85 ~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~~~~~ 145 (470)
..+...+.. ....+...++.+++.| .|+||.+. .+..+|+++|+|.+.+.++..+
T Consensus 110 ~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G---~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 110 HEIEAMLGVKIKEFLFSSEDEITTLISKVKTEN---IKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp HHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTT---CCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCC---CeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 222222221 2456677888888754 99999983 4689999999999998775544
No 83
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=75.30 E-value=4.6 Score=38.24 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=35.1
Q ss_pred CCCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 8 QHQPHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 8 ~~~~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
++.++|+|++. |+-|-..-...+|..|+++|++|.++..+.
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34567877777 888999999999999999999999998763
No 84
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=75.11 E-value=12 Score=33.53 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=29.1
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEE
Q 041902 9 HQPHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFA 44 (470)
Q Consensus 9 ~~~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~ 44 (470)
++++.+|++. +.-|-..=.+.|++.|+++|++|.++
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 3456666655 45578889999999999999999998
No 85
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=72.89 E-value=10 Score=34.21 Aligned_cols=115 Identities=12% Similarity=0.077 Sum_probs=65.4
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeC------cc--chhhhcCCCCCCCCce----EEEcCCCCCC
Q 041902 9 HQPHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFATT------IF--AYRRMANSPTPEDGLS----FASFSDGYDD 74 (470)
Q Consensus 9 ~~~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~~~------~~--~~~~v~~~~~~~~g~~----~~~i~~~~~~ 74 (470)
++|+.+|++. ..-|-..=.+.|++.|+++|++|.++=+ +. ....+.+. .|+. .+.+....
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~----~g~~~~~~~~~~~~p~-- 97 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRL----AGVTQLAGLARYPQPM-- 97 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHH----HCCCEEEEEEECSSSS--
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHH----cCCCCCCCCeeECCCC--
Confidence 4567766665 3457889999999999999999999832 11 11111011 2221 11111111
Q ss_pred CCCCCCCCchhhHHHHHH----HhHHHHHHHHHhhhhcCCCCccEEEeCCCc----------hhHHHHHHHcCCCeEEEe
Q 041902 75 GFNSKQNDPRRYVSEFKR----RSSEALTEIITGSENQGAQPFTCLVYSLLL----------PWTAEVARAYHLPSALLW 140 (470)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~----------~~~~~~A~~~giP~i~~~ 140 (470)
...+..... ...+.+.+.++.+. .++|+||+|... .....+|+.++.|++.+.
T Consensus 98 ---------sP~~aa~~~~~~~~~~~~i~~~~~~l~----~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~ 164 (251)
T 3fgn_A 98 ---------APAAAAEHAGMALPARDQIVRLIADLD----RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVV 164 (251)
T ss_dssp ---------CHHHHHHHTTCCCCCHHHHHHHHHTTC----CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEE
T ss_pred ---------ChHHHHHHcCCCCCCHHHHHHHHHHHH----hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEE
Confidence 112211111 12234555555553 468999998531 245789999999999876
Q ss_pred ch
Q 041902 141 IQ 142 (470)
Q Consensus 141 ~~ 142 (470)
..
T Consensus 165 ~~ 166 (251)
T 3fgn_A 165 TA 166 (251)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 86
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.23 E-value=4 Score=34.05 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc----chhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF----AYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDP 83 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~----~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~ 83 (470)
.++.+|++.+.++.+|-....-++..|..+|++|.+..... ..+.+ .. .+.+.+-+......
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa-~~----~~~diV~lS~~~~~--------- 81 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAA-VQ----EDVDVIGVSILNGA--------- 81 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHH-HH----TTCSEEEEEESSSC---------
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH-Hh----cCCCEEEEEeechh---------
Confidence 46679999999999999999999999999999999886542 33334 33 44555544322111
Q ss_pred hhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEE
Q 041902 84 RRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSAL 138 (470)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~ 138 (470)
....+.++++.+++.+....-++|.......-...++..|+-.+.
T Consensus 82 ----------~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 82 ----------HLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp ----------HHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred ----------hHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 122333444444443201244666664433333346788887443
No 87
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=70.81 E-value=25 Score=36.57 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=47.6
Q ss_pred CCeEEe---eccCh---------hhhccccccccceecc---Cch-hhhhhhhcCCcEeeccccchhhHHHHHHHhh---
Q 041902 340 EKGMIV---PWCSQ---------VEVLSHEAVGCFVTHC---GWN-SSLESLVCGVPVVAFPQWTDQGTNAKIIVDF--- 400 (470)
Q Consensus 340 ~nv~v~---~~vp~---------~~vl~~~~v~~~ItHG---G~g-t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~--- 400 (470)
++|.++ .|++. ..+++.+++ ||.-. |+| +.+||+++|+|.|+.-..+ ....+.+.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~ 563 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIET 563 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccc
Confidence 445554 77765 357888888 77543 444 8899999999999876543 12222210
Q ss_pred ---hcceeEeeecCCCCcCHHHHHHHHHHHh
Q 041902 401 ---CKTGVRVKANEEGILESDEIKRCLELVM 428 (470)
Q Consensus 401 ---~GvG~~l~~~~~~~~~~~~l~~~i~~vl 428 (470)
-+.|+.+... ...+.+++.++|.+.|
T Consensus 564 ~~~~~tG~lV~~r--d~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 564 NQAKDYGIYIVDR--RFKAPDESVEQLVDYM 592 (725)
T ss_dssp HHHHHTTEEEECC--SSSCHHHHHHHHHHHH
T ss_pred cCCCCceEEEeCC--CCCCHHHHHHHHHHHH
Confidence 1356666420 2345555555555544
No 88
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=70.40 E-value=4.7 Score=34.38 Aligned_cols=42 Identities=10% Similarity=-0.039 Sum_probs=36.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+||++..+|+.|=. -...+.+.|+++|++|.++.++...+.+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 37888888887766 6889999999999999999999888777
No 89
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=69.28 E-value=4.9 Score=35.08 Aligned_cols=44 Identities=9% Similarity=-0.045 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 9 HQPHFLLVTFPAQGHINP-ALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P-~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
..+||++.-+|+ +..+- .+.+.+.|+++|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 456999998887 45665 899999999999999999998777555
No 90
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=68.61 E-value=44 Score=29.44 Aligned_cols=106 Identities=8% Similarity=-0.003 Sum_probs=60.8
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCc-c---chhhhcCCCCCCCCceEEEcCCC-CCCCCCCC
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTI-F---AYRRMANSPTPEDGLSFASFSDG-YDDGFNSK 79 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~-~---~~~~v~~~~~~~~g~~~~~i~~~-~~~~~~~~ 79 (470)
..++|||+|+..++..- +.++.++|.+. +++|..+.+. . ..+.. +. .|+.+..++.. +..
T Consensus 19 ~~~~~rI~~l~SG~g~~---~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A-~~----~gIp~~~~~~~~~~~----- 85 (229)
T 3auf_A 19 QGHMIRIGVLISGSGTN---LQAILDGCREGRIPGRVAVVISDRADAYGLERA-RR----AGVDALHMDPAAYPS----- 85 (229)
T ss_dssp BTTCEEEEEEESSCCHH---HHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH-HH----TTCEEEECCGGGSSS-----
T ss_pred cCCCcEEEEEEeCCcHH---HHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH-HH----cCCCEEEECcccccc-----
Confidence 34457999997776432 45666677776 6888766543 2 11334 55 78888876532 110
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. ....+ ++++.+++ .+||+||+-.+. .....+-..+...++-++++
T Consensus 86 ----r-------~~~~~---~~~~~l~~---~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 ----R-------TAFDA---ALAERLQA---YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ----H-------HHHHH---HHHHHHHH---TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ----h-------hhccH---HHHHHHHh---cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 1 11112 23333433 569999997553 34455556666677777554
No 91
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=68.29 E-value=3.8 Score=35.44 Aligned_cols=44 Identities=7% Similarity=-0.032 Sum_probs=37.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
.++||++..+|+.|=.. ...+.+.|+++|++|.++.++...+.+
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 45699999999988774 789999999999999999998877766
No 92
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=67.66 E-value=8.5 Score=38.15 Aligned_cols=58 Identities=14% Similarity=0.225 Sum_probs=40.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCC--CCCCC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSD--GYDDG 75 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~--~~~~~ 75 (470)
+++||-+|++. .+=.-++.+|+.|.+.|+++. .+....+.+ +. .|+.+..+.+ ++|+.
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L-~e----~GI~v~~V~~vTgfPEi 66 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTI-AD----TGIPVTPVEQLTGFPEV 66 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHH-HT----TTCCCEEHHHHHSCCCC
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHH-HH----cCCceeeccccCCCchh
Confidence 34566566665 344558899999999999875 566677778 66 7888887742 44443
No 93
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=67.42 E-value=4.7 Score=35.21 Aligned_cols=46 Identities=20% Similarity=0.131 Sum_probs=37.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCccchhhhcCC
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIR-IGTRVTFATTIFAYRRMANS 56 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~~ 56 (470)
.++||++..+|+.+=+ -...+.++|++ +|++|.++.++...+.+ ..
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi-~~ 64 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY-SP 64 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS-CG
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh-CH
Confidence 4568999999998844 56899999999 89999999999988887 44
No 94
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=66.59 E-value=16 Score=35.10 Aligned_cols=37 Identities=14% Similarity=0.094 Sum_probs=28.1
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 6 HRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.|++.+||+++-.+..+ +.+++++++.|++|.++..+
T Consensus 3 ~m~~~~~ilI~g~g~~~-----~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 3 AMYDNKRLLILGAGRGQ-----LGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp ---CCCEEEEECCCGGG-----HHHHHHHHHHTCEEEEEECS
T ss_pred cccCCCEEEEECCcHhH-----HHHHHHHHHCCCEEEEEcCC
Confidence 46678899999777643 66899999999999999654
No 95
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=64.56 E-value=23 Score=33.05 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
++|||+|+-.+..+ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 46999999876533 34446677789999877654
No 96
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=64.06 E-value=9.5 Score=33.20 Aligned_cols=41 Identities=17% Similarity=-0.100 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.++.+|++.+.++..|-....-++..|..+|++|.+.+...
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~v 126 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDI 126 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSB
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 34569999999999999999999999999999999987653
No 97
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=63.50 E-value=11 Score=34.14 Aligned_cols=40 Identities=10% Similarity=-0.144 Sum_probs=36.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.++.+|++.+.++..|-....-++..|.++|++|.+.+..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4567999999999999999999999999999999988643
No 98
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=62.84 E-value=7.4 Score=35.67 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
||||+ +|+.|.+-. .|+++|.++||+|+.++-
T Consensus 1 MkILV--TGatGfIG~--~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLV--GGGTGFIGT--ALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEE--ETTTSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred CEEEE--ECCCCHHHH--HHHHHHHHCCCEEEEEEC
Confidence 78664 367777654 468899999999999864
No 99
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=62.44 E-value=16 Score=29.19 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 9 HQPHFLLVTFPA---QGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 9 ~~~~il~~~~~~---~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
..+|++|+.+.+ .......+.+|....+.||+|+++-...-...+
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 345776655544 456678889999999999999988776555544
No 100
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=62.18 E-value=33 Score=30.11 Aligned_cols=148 Identities=14% Similarity=0.055 Sum_probs=77.7
Q ss_pred hhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHh-CCCeEEeeccCh
Q 041902 272 WLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEEL-NEKGMIVPWCSQ 350 (470)
Q Consensus 272 ~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~nv~v~~~vp~ 350 (470)
|++- .+++++.|..|.++ ...+..|...|..++++.+.. . +.+.+.. ..++......-.
T Consensus 26 fl~L-~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~-~-----------~~l~~l~~~~~i~~i~~~~~ 85 (223)
T 3dfz_A 26 MLDL-KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV-S-----------AEINEWEAKGQLRVKRKKVG 85 (223)
T ss_dssp EECC-TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC-C-----------HHHHHHHHTTSCEEECSCCC
T ss_pred EEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC-C-----------HHHHHHHHcCCcEEEECCCC
Confidence 3443 35668888887655 334566777788877765432 1 1222111 234554422222
Q ss_pred hhhccccccccceeccCchhhhhhhh----cCCcEeeccccchhhHHHH-----HHHhhhcceeEeeecCCCCcCHHHHH
Q 041902 351 VEVLSHEAVGCFVTHCGWNSSLESLV----CGVPVVAFPQWTDQGTNAK-----IIVDFCKTGVRVKANEEGILESDEIK 421 (470)
Q Consensus 351 ~~vl~~~~v~~~ItHGG~gt~~eal~----~GvP~v~~P~~~DQ~~nA~-----rl~~~~GvG~~l~~~~~~~~~~~~l~ 421 (470)
..-|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+. .+.+ -++-+.+.++.....-...|+
T Consensus 86 ~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~r-g~l~iaIST~G~sP~la~~iR 158 (223)
T 3dfz_A 86 EEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSR-GRLSLAISTDGASPLLTKRIK 158 (223)
T ss_dssp GGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEE-TTEEEEEECTTSCHHHHHHHH
T ss_pred HhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEe-CCEEEEEECCCCCcHHHHHHH
Confidence 344666666 888877766555444 4555432 34433321 1222 234444444222333456788
Q ss_pred HHHHHHhcCCH--HHHHHHHHHHHHHHH
Q 041902 422 RCLELVMGEGD--EFRGNSLKWKDLARE 447 (470)
Q Consensus 422 ~~i~~vl~~~~--~~r~~a~~~~~~~~~ 447 (470)
+.|+..+. .. .+.+.+.++++.+++
T Consensus 159 ~~ie~~lp-~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 159 EDLSSNYD-ESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHSC-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcc-HHHHHHHHHHHHHHHHHHH
Confidence 88888886 32 566777777777765
No 101
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=59.46 E-value=27 Score=30.51 Aligned_cols=103 Identities=15% Similarity=0.050 Sum_probs=56.0
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEee
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVP 346 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~ 346 (470)
.++..+|.+++ ...||-|.-. .......++....+-.+|-+++.. .. +.+.....-....++.
T Consensus 35 ~~lg~~LA~~G---~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~-~~---------~~e~~~~~~~~~~~~~ 97 (215)
T 2a33_A 35 VDLGNELVSRN---IDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKT-LM---------PRELTGETVGEVRAVA 97 (215)
T ss_dssp HHHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESS-CC-----------------CCEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchH-hc---------chhhccCCCCceeecC
Confidence 45666776653 5556655431 233445566666777777777654 11 1111101012234455
Q ss_pred ccCh-hhhccccccccceeccCchhhhhhh---------hcCCcEeeccc
Q 041902 347 WCSQ-VEVLSHEAVGCFVTHCGWNSSLESL---------VCGVPVVAFPQ 386 (470)
Q Consensus 347 ~vp~-~~vl~~~~v~~~ItHGG~gt~~eal---------~~GvP~v~~P~ 386 (470)
.++. ..++..-+-+.++--||.||.-|.. .+++|++++-.
T Consensus 98 ~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 98 DMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp SHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred CHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 5554 3333333334577899999997776 25899998864
No 102
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=58.70 E-value=16 Score=38.57 Aligned_cols=111 Identities=11% Similarity=-0.009 Sum_probs=77.7
Q ss_pred eccChhhhccccccccceeccCchhhhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecC----CCCcCHHHHH
Q 041902 346 PWCSQVEVLSHEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANE----EGILESDEIK 421 (470)
Q Consensus 346 ~~vp~~~vl~~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~----~~~~~~~~l~ 421 (470)
++.+-.++|..+|+ +||= =.+.+.|.+..++|+|....-.|++..- . .| ...+..+ .---+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----L-RG--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----C-CS--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----c-CC--cccChhHhCCCCeECCHHHHH
Confidence 45567889988998 9997 4578899999999999987766665331 0 12 2222100 1234788999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhh
Q 041902 422 RCLELVMGEGDEFRGNSLKWKDLAREAAKQGGSSYKNLKAFVDDFG 467 (470)
Q Consensus 422 ~~i~~vl~~~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 467 (470)
++|......+..|+++.+++.+++-.+ ++|.++++.++.+++...
T Consensus 675 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 999888762347888888888887654 677788888777776543
No 103
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=58.28 E-value=12 Score=33.84 Aligned_cols=47 Identities=19% Similarity=-0.004 Sum_probs=34.8
Q ss_pred cccCCCCEEEEEcCCCccCH---HHHHHHHHHHHhCCCeEEEEeCccchh
Q 041902 5 QHRQHQPHFLLVTFPAQGHI---NPALQLARRLIRIGTRVTFATTIFAYR 51 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~---~P~l~la~~L~~~Gh~V~~~~~~~~~~ 51 (470)
+-.+..||++|++.+.-+-+ .-.-.|+.-|+.||++|+..=-+.+..
T Consensus 17 ~~~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 17 NLYFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp ----CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred ccccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 44567899999999766554 557789999999999999996665443
No 104
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=58.14 E-value=33 Score=33.25 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=23.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+++.||++++.+-... .+.++.++.|++|+++...
T Consensus 3 ~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 3 KRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp CCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEET
T ss_pred CCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECC
Confidence 3446788776544321 3567788889999988654
No 105
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=57.59 E-value=43 Score=28.15 Aligned_cols=112 Identities=10% Similarity=0.093 Sum_probs=66.6
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhh-hHHHHHHhCCCeEEe---eccChhhhcc
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDV-VMKYKEELNEKGMIV---PWCSQVEVLS 355 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~nv~v~---~~vp~~~vl~ 355 (470)
.+++.-.||+.... ...+++.|.+.|.++-++.+.. ... .+ +..++ .+.+.++.. .|+++-.+-.
T Consensus 7 ~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~-A~~------fi~~~~l~-~l~~~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 7 NVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTN-GRK------FINGEILK-QFCDNYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp EEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTG-GGG------GSCHHHHH-HHCSCEECTTTCTTCCHHHHHH
T ss_pred EEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcC-HHH------HhhHHHHH-HhcCCEEecCCCCccccccccc
Confidence 46666677776532 3456777777788887777765 333 33 33333 343433321 3455666555
Q ss_pred ccccccceeccCchhhh-------------hhhhcCCcEeeccc-------cchhhHHHHHHHhhhcce
Q 041902 356 HEAVGCFVTHCGWNSSL-------------ESLVCGVPVVAFPQ-------WTDQGTNAKIIVDFCKTG 404 (470)
Q Consensus 356 ~~~v~~~ItHGG~gt~~-------------eal~~GvP~v~~P~-------~~DQ~~nA~rl~~~~GvG 404 (470)
.+|+ .+|--+=.||+. -++..++|.+++|- ..=...|..++.+ .|+=
T Consensus 76 ~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 76 KHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred hhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 5554 356666666443 35778999999993 2223467788887 7753
No 106
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=57.54 E-value=14 Score=32.28 Aligned_cols=41 Identities=7% Similarity=-0.168 Sum_probs=35.4
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
..++.+|++.+.++..|-....-++..|..+|++|.+.+..
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 34567999999999999999999999999999999998654
No 107
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=56.30 E-value=29 Score=30.34 Aligned_cols=102 Identities=14% Similarity=0.046 Sum_probs=56.6
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEee
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVP 346 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~ 346 (470)
.++..++..++ ...|+-|.-. .......++....+-.++-+++.. ..+.+....--.+..++.
T Consensus 31 ~~lg~~LA~~g---~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~----------l~~~e~~~~~~~~~~~~~ 93 (216)
T 1ydh_A 31 IELGNELVKRK---IDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKA----------LMPIEISGETVGDVRVVA 93 (216)
T ss_dssp HHHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGG----------GHHHHCCSSCCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechh----------cCccccccCCCCcccccC
Confidence 46667776653 4555555421 234556666667777777766532 222111000002244444
Q ss_pred ccCh-hh-hccccccccceeccCchhhhhhh---------hcCCcEeeccc
Q 041902 347 WCSQ-VE-VLSHEAVGCFVTHCGWNSSLESL---------VCGVPVVAFPQ 386 (470)
Q Consensus 347 ~vp~-~~-vl~~~~v~~~ItHGG~gt~~eal---------~~GvP~v~~P~ 386 (470)
.++. .. ++..++. .++--||.||.-|.. .+++|++++-.
T Consensus 94 ~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 94 DMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp SHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred CHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4443 22 3344443 577899999988775 57999999863
No 108
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=54.57 E-value=74 Score=31.92 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
..|++++ |.-.-.+.|++.|.+-|.+|+.+...
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeC
Confidence 3577776 34445667888888889888887654
No 109
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=54.45 E-value=37 Score=33.28 Aligned_cols=41 Identities=20% Similarity=0.222 Sum_probs=34.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAY 50 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~ 50 (470)
+..|+++-.++.|-..=+..||..|+++|++|.++..+.+.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 44566666788899999999999999999999999877554
No 110
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=54.14 E-value=6.4 Score=37.87 Aligned_cols=36 Identities=22% Similarity=0.160 Sum_probs=31.7
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 11 PHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 11 ~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
|+|+|++. |+-|-..=...+|..|+.+|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 67887777 6778999999999999999999999976
No 111
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=52.93 E-value=33 Score=31.67 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=50.7
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccc
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEA 358 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~ 358 (470)
+-.|+++--|-.....+.+..+...|...+..+.+..... . .....+.+.. ....+
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-~--------~~a~~~~~~~---------------~~~~d 65 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-Q--------GDATKYCQEF---------------ASKVD 65 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-T--------THHHHHHHHH---------------TTTCS
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-c--------chHHHHHHHh---------------hcCCC
Confidence 3345556544333223556778888888887776665443 1 1111121111 12345
Q ss_pred cccceeccCchhhhhhhh------cCCcEeecccc
Q 041902 359 VGCFVTHCGWNSSLESLV------CGVPVVAFPQW 387 (470)
Q Consensus 359 v~~~ItHGG~gt~~eal~------~GvP~v~~P~~ 387 (470)
+ +|.-||-||+.|++. .++|+.++|..
T Consensus 66 ~--vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 66 L--IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp E--EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred E--EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 5 999999999999864 57899999974
No 112
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=50.61 E-value=23 Score=31.34 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
-+++|++..-|+.|-..=++.+|..|+.+|++|.++..+
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 357899999999999999999999999999999888664
No 113
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=49.01 E-value=39 Score=28.87 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=58.9
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEee
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVP 346 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~ 346 (470)
.++..+|.+++ ...||-|.-. .......++....+-.++-+++.. - ...+.....-.+..++.
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~-l---------~~~e~~~~~~~~~~~~~ 85 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSG-L---------FSGEVVHQNLTELIEVN 85 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETT-C---------CHHHHTTCCCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCch-h---------cccccccCCCCccccCC
Confidence 56677777654 4556665421 234556666777777888777654 1 11111000112334455
Q ss_pred ccCh-hhhccccccccceeccCchhhhhh---h------hcCCcEeeccc
Q 041902 347 WCSQ-VEVLSHEAVGCFVTHCGWNSSLES---L------VCGVPVVAFPQ 386 (470)
Q Consensus 347 ~vp~-~~vl~~~~v~~~ItHGG~gt~~ea---l------~~GvP~v~~P~ 386 (470)
..+. ..++..-+-+.++--||.||.-|. + .+++|++++..
T Consensus 86 ~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 86 GMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred CHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 5554 333333333467889999997665 5 37899999864
No 114
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=48.18 E-value=13 Score=30.23 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
++.|++++- .|++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 456888873 36665 57788999999999999774
No 115
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=47.84 E-value=23 Score=27.59 Aligned_cols=48 Identities=6% Similarity=-0.066 Sum_probs=34.9
Q ss_pred ccCCCCEEEEEcCCCccCH--HHHHHHHHHHHhCC--CeEEEEeCccchhhh
Q 041902 6 HRQHQPHFLLVTFPAQGHI--NPALQLARRLIRIG--TRVTFATTIFAYRRM 53 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~--~P~l~la~~L~~~G--h~V~~~~~~~~~~~v 53 (470)
.|...||++|+-+...-.. +-.+..|...+++| |+|.++......+.+
T Consensus 3 ~~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L~ 54 (117)
T 2fb6_A 3 AMSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKLV 54 (117)
T ss_dssp CSSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHHH
T ss_pred ccccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeeec
Confidence 4555689988877654333 34678899999999 899999777666644
No 116
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=47.11 E-value=29 Score=31.75 Aligned_cols=39 Identities=26% Similarity=0.281 Sum_probs=24.9
Q ss_pred ccCCCCEEEEEcC-CCccCHHHHH--HHHHHHHhCCCeEEEE
Q 041902 6 HRQHQPHFLLVTF-PAQGHINPAL--QLARRLIRIGTRVTFA 44 (470)
Q Consensus 6 ~~~~~~~il~~~~-~~~GH~~P~l--~la~~L~~~Gh~V~~~ 44 (470)
-.++.||||++-. |-...++-.+ ...+.|.+.||+|+++
T Consensus 18 ~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 18 LYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp ----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred chhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 3467799977754 5545455433 4577888899999987
No 117
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=46.49 E-value=99 Score=26.80 Aligned_cols=102 Identities=4% Similarity=0.010 Sum_probs=57.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCcc----chhhhcCCCCCCCCceEEEcCCC-CCCCCCCCCCCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGT--RVTFATTIF----AYRRMANSPTPEDGLSFASFSDG-YDDGFNSKQNDP 83 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh--~V~~~~~~~----~~~~v~~~~~~~~g~~~~~i~~~-~~~~~~~~~~~~ 83 (470)
|||+|+..++..- +.++.++|.+.+| +|..+.+.. ..+.. +. .|+.+..++.. +..
T Consensus 2 ~rI~vl~SG~g~~---~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A-~~----~gIp~~~~~~~~~~~--------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGSN---LQAIIDAIESGKVNASIELVISDNPKAYAIERC-KK----HNVECKVIQRKEFPS--------- 64 (216)
T ss_dssp EEEEEEECSCCHH---HHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH-HH----HTCCEEECCGGGSSS---------
T ss_pred CEEEEEEeCCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH-HH----cCCCEEEeCcccccc---------
Confidence 5888887666533 5566677888888 776664432 12233 44 68888766432 110
Q ss_pred hhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 84 RRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. ....+ ++++.+++ .+||+||+-.+. .....+-....-.++-++++
T Consensus 65 r-------~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 K-------KEFEE---RMALELKK---KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp H-------HHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred h-------hhhhH---HHHHHHHh---cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 1 11112 23333433 569999987553 33455555555667776554
No 118
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=46.15 E-value=43 Score=28.69 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=77.4
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeec-----cChhhhc
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPW-----CSQVEVL 354 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~-----vp~~~vl 354 (470)
.+++.-.||++... ...+++.|.+.|.++-++.+.. ... .+.....+.+.++++..-| +.+-.+.
T Consensus 10 ~IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~-A~~------fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~ 79 (194)
T 1p3y_1 10 KLLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKT-AED------LIPAHTVSYFCDHVYSEHGENGKRHSHVEIG 79 (194)
T ss_dssp EEEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHH-HHH------HSCHHHHGGGSSEEECTTCSSSCCCCHHHHH
T ss_pred EEEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchh-HHH------HHHHHHHHHhcCCEeccccccCCCcCccccc
Confidence 46666667766432 2445566666777777777654 222 2222222245555322122 3344444
Q ss_pred cccccccceeccCchhhh-------------hhhhcCCcEeecccc----ch---hhHHHHHHHhhhcceeEeeecCC--
Q 041902 355 SHEAVGCFVTHCGWNSSL-------------ESLVCGVPVVAFPQW----TD---QGTNAKIIVDFCKTGVRVKANEE-- 412 (470)
Q Consensus 355 ~~~~v~~~ItHGG~gt~~-------------eal~~GvP~v~~P~~----~D---Q~~nA~rl~~~~GvG~~l~~~~~-- 412 (470)
..+|+ .+|.-+=.||+. -++..++|.+++|-. .. ...|-.++.+ .|+ ..+.+...
T Consensus 80 ~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~-~iv~p~~g~~ 156 (194)
T 1p3y_1 80 RWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGH-IVIEPVEIMA 156 (194)
T ss_dssp HHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTC-EECCCBCCC-
T ss_pred ccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCC-EEECCCCCcc
Confidence 44554 366666666443 236688999999942 22 2567788887 786 33333221
Q ss_pred ------------CCcCHHHHHHHHHHHhc
Q 041902 413 ------------GILESDEIKRCLELVMG 429 (470)
Q Consensus 413 ------------~~~~~~~l~~~i~~vl~ 429 (470)
.-.+.++|.+.+.+.+.
T Consensus 157 f~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 157 FEIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp -----------CBCCCHHHHHHHHHHHCC
T ss_pred cccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 12468899999888887
No 119
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=46.14 E-value=1e+02 Score=27.61 Aligned_cols=33 Identities=12% Similarity=0.004 Sum_probs=23.8
Q ss_pred CCccEEEe-CCCc-hhHHHHHHHcCCCeEEEechh
Q 041902 111 QPFTCLVY-SLLL-PWTAEVARAYHLPSALLWIQP 143 (470)
Q Consensus 111 ~~pDlvv~-d~~~-~~~~~~A~~~giP~i~~~~~~ 143 (470)
..||+||+ |+.. ..+..=|.++|||+|.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 46999865 5433 356667889999999986544
No 120
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.90 E-value=48 Score=31.32 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=21.3
Q ss_pred ccccccceeccCchhh---hhhhhcCCcEeec
Q 041902 356 HEAVGCFVTHCGWNSS---LESLVCGVPVVAF 384 (470)
Q Consensus 356 ~~~v~~~ItHGG~gt~---~eal~~GvP~v~~ 384 (470)
++|+ +|++||.-+. ..|-..|+|.++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 5777 9999998764 5577789999863
No 121
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=45.89 E-value=1.1e+02 Score=28.11 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=55.3
Q ss_pred CEEEEEcCCCcc---CH--HHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCC----ceEEEcCCCCCCCCCCCCC
Q 041902 11 PHFLLVTFPAQG---HI--NPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDG----LSFASFSDGYDDGFNSKQN 81 (470)
Q Consensus 11 ~~il~~~~~~~G---H~--~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g----~~~~~i~~~~~~~~~~~~~ 81 (470)
..|++.+....+ .+ .-+..+++.|.++|++|.+++++...+.. +......+ ...+.+.. .
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~-~~i~~~~~~~~~~~~~~l~g----------~ 249 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAG-NEILAALNTEQQAWCRNLAG----------E 249 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHH-HHHHTTSCHHHHTTEEECTT----------T
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHH-HHHHHhhhhccccceEeccC----------c
Confidence 355666544232 22 36889999999999999998776544333 11000000 01111110 0
Q ss_pred CchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEec
Q 041902 82 DPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWI 141 (470)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~ 141 (470)
. ....+.+++. .-|++|+.. .+..++|..+|+|++.++.
T Consensus 250 ~-----------sl~e~~ali~--------~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 250 T-----------QLDQAVILIA--------ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp S-----------CHHHHHHHHH--------TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred C-----------CHHHHHHHHH--------hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 0 1112223333 269999863 4578889999999998754
No 122
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=45.72 E-value=83 Score=24.75 Aligned_cols=62 Identities=8% Similarity=-0.016 Sum_probs=41.7
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLA 445 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~ 445 (470)
..+|+|++--..+ ........+ .|+--.+.+ .++.++|.+.|++++. ...+++..+++++.+
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~k----P~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAK----PFAADRLVQSARRAEE-KRRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEES----SCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeC----CCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788888865444 344455555 787666663 6899999999999998 655544444444443
No 123
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=45.71 E-value=32 Score=33.91 Aligned_cols=87 Identities=11% Similarity=0.056 Sum_probs=51.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHH
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSE 89 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 89 (470)
.+|++++. .-.-.+.+++-|.+-|.+|+.+......+.. +. ... ... +...
T Consensus 313 Gkrv~i~~-----~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~-~~----~~~----------------~~v---~~~D 363 (458)
T 3pdi_B 313 SARTAIAA-----DPDLLLGFDALLRSMGAHTVAAVVPARAAAL-VD----SPL----------------PSV---RVGD 363 (458)
T ss_dssp TCEEEEEC-----CHHHHHHHHHHHHTTTCEEEEEEESSCCSCC-TT----TTS----------------SCE---EESH
T ss_pred CCEEEEEC-----CcHHHHHHHHHHHHCCCEEEEEEECCCChhh-hh----Ccc----------------CcE---EeCC
Confidence 35777643 3345577888888889888888765533222 22 100 001 0011
Q ss_pred HHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEE
Q 041902 90 FKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALL 139 (470)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~ 139 (470)
+. .++++++. .+||+||.+.. ...+|+++|||++.+
T Consensus 364 ~~-----~le~~i~~------~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 364 LE-----DLEHAARA------GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HH-----HHHHHHHH------HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HH-----HHHHHHHh------cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 11 13334433 35999999843 678999999999985
No 124
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=45.66 E-value=89 Score=26.84 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=76.8
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCc---hhhhHHHHHHhCCCeEEeec--cChhhh
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGE---DDVVMKYKEELNEKGMIVPW--CSQVEV 353 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~nv~v~~~--vp~~~v 353 (470)
+.+++.=.||++.. +..-.+++.|.+.|.++-++++.. ...-...+ +.+.+.++ .+.++-.+.++ +++-..
T Consensus 8 k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~-A~~~i~~~~~~~~~~~~l~-~l~g~~v~~~~~~~~hi~~ 83 (201)
T 3lqk_A 8 KHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHT-VQTTDTKFGESSEWINKIK-QITEEPIVDSMVKAEPFGP 83 (201)
T ss_dssp CEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSC-SCCTTCCTTCSCHHHHHHH-HHCCSCCBCSHHHHGGGTT
T ss_pred CEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChh-HHHHHHHhhchhHHHHHHH-HHhCCCeEeecCccccccc
Confidence 34666666776643 123445666666788887777765 32200000 00011222 22222111111 123332
Q ss_pred ccccccccceeccCchhhh----------------hhhhcCCcEeecc----ccchhhHHHHHHHhhhcceeEeeecC--
Q 041902 354 LSHEAVGCFVTHCGWNSSL----------------ESLVCGVPVVAFP----QWTDQGTNAKIIVDFCKTGVRVKANE-- 411 (470)
Q Consensus 354 l~~~~v~~~ItHGG~gt~~----------------eal~~GvP~v~~P----~~~DQ~~nA~rl~~~~GvG~~l~~~~-- 411 (470)
-..+|+ .+|.-|=.||+. .+|..++|.+++| .....+.|..++.+ .|+=+.....+
T Consensus 84 s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~ 161 (201)
T 3lqk_A 84 KTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDN 161 (201)
T ss_dssp TSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESC
T ss_pred ccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccc
Confidence 233333 356665555432 2356799999999 34678889999998 89654433211
Q ss_pred -CC-----CcCHHHHHHHHHHHhc
Q 041902 412 -EG-----ILESDEIKRCLELVMG 429 (470)
Q Consensus 412 -~~-----~~~~~~l~~~i~~vl~ 429 (470)
.. ..+.+.|.+.|.++|+
T Consensus 162 ~~~~p~s~~a~~~~i~~tv~~al~ 185 (201)
T 3lqk_A 162 PQVKPNSLVARMEALPETIEAALR 185 (201)
T ss_dssp TTTCTTCEEECGGGHHHHHHHHHT
T ss_pred cccCCCcccCCHHHHHHHHHHHHh
Confidence 01 1334788888888887
No 125
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=45.32 E-value=23 Score=30.10 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPALQ-LARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~-la~~L~~~Gh~V~~~~~~ 47 (470)
+.|||+++.+. .|+..-+.. +++.|.+.|++|.++--.
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 45899999888 888776664 466677789999888543
No 126
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=44.93 E-value=87 Score=31.34 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
..|++++. .-.-.+.|++.|.+.|-+|..+....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 35777763 33446677888888898888765543
No 127
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=44.85 E-value=1.3e+02 Score=24.91 Aligned_cols=146 Identities=10% Similarity=0.056 Sum_probs=77.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccc
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEA 358 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~ 358 (470)
+|.|-|=+||.. +....+++...|+..|.++-+.+-.- . ..|+.+.+... +.. -...+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-H--------R~p~~l~~~~~----------~a~-~~g~~ 68 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-H--------RTPDYMFEYAE----------TAR-ERGLK 68 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-T--------TSHHHHHHHHH----------HTT-TTTCC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec-c--------CCHHHHHHHHH----------HHH-hCCCc
Confidence 456778888877 56678889999999998876655433 2 44554432110 000 01133
Q ss_pred cccceeccCch----hhhhhhhcCCcEeeccccch-hhHHHHHHHh-h--hcceeE-eeecCCCCcCHHHHHHHHHHHhc
Q 041902 359 VGCFVTHCGWN----SSLESLVCGVPVVAFPQWTD-QGTNAKIIVD-F--CKTGVR-VKANEEGILESDEIKRCLELVMG 429 (470)
Q Consensus 359 v~~~ItHGG~g----t~~eal~~GvP~v~~P~~~D-Q~~nA~rl~~-~--~GvG~~-l~~~~~~~~~~~~l~~~i~~vl~ 429 (470)
| +|.=+|.. ++..++ --+|++.+|.... -......+.- - .|+.+. +..++.+.++...+...|. -+.
T Consensus 69 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~ 144 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSF 144 (170)
T ss_dssp E--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTT
T ss_pred E--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccC
Confidence 4 56555543 333333 3688899987542 1111112221 0 233321 1210001234444444443 346
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 041902 430 EGDEFRGNSLKWKDLAREAAKQ 451 (470)
Q Consensus 430 ~~~~~r~~a~~~~~~~~~~~~~ 451 (470)
|+.++++.+.++++..+....
T Consensus 145 -d~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 145 -HDDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999988875443
No 128
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.35 E-value=50 Score=26.62 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
...++|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 17 ~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 34478888843 5444 44688899999999998654
No 129
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=43.91 E-value=1.5e+02 Score=25.57 Aligned_cols=102 Identities=11% Similarity=0.069 Sum_probs=58.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc----chhhhcCCCCCCCCceEEEcCCC-CCCCCCCCCCCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIF----AYRRMANSPTPEDGLSFASFSDG-YDDGFNSKQNDP 83 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~----~~~~v~~~~~~~~g~~~~~i~~~-~~~~~~~~~~~~ 83 (470)
|||.++-.++..- +.++.++|.+. +|+|..+.+.. ..+.. +. .|+.+..++.. +..
T Consensus 4 ~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A-~~----~gIp~~~~~~~~~~~--------- 66 (212)
T 3av3_A 4 KRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGAKVIERA-AR----ENVPAFVFSPKDYPS--------- 66 (212)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHH-HH----TTCCEEECCGGGSSS---------
T ss_pred cEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHH-HH----cCCCEEEeCcccccc---------
Confidence 5887777766443 44556677776 78998776542 22233 55 78888766431 110
Q ss_pred hhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 84 RRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. ..... ++++.+++ .+||+||+-.+. .....+-..+.-.++-++++
T Consensus 67 ~-------~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 K-------AAFES---EILRELKG---RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp H-------HHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred h-------hhhHH---HHHHHHHh---cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 1 01111 23333433 569999987653 34555556666677777654
No 130
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=43.43 E-value=51 Score=25.88 Aligned_cols=43 Identities=14% Similarity=0.039 Sum_probs=31.0
Q ss_pred CEEEEEc-CCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCccchhhh
Q 041902 11 PHFLLVT-FPAQG--HINPALQLARRLIRIGTRV-TFATTIFAYRRM 53 (470)
Q Consensus 11 ~~il~~~-~~~~G--H~~P~l~la~~L~~~Gh~V-~~~~~~~~~~~v 53 (470)
||++|+- .+.+| .....+.+|..+.+.||+| .++-..+-....
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~ 47 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNS 47 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHH
Confidence 5564444 45555 3467899999999999999 888776666555
No 131
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=42.96 E-value=38 Score=29.14 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.|+|++. |+.|.+-. .|+++|.++||+|+.+...
T Consensus 4 m~~ilIt--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVGS--ALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHHH--HHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCchHHH--HHHHHHHHCCCEEEEEEcC
Confidence 3676554 56666553 6788899999999998664
No 132
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=41.81 E-value=1.6e+02 Score=24.82 Aligned_cols=142 Identities=14% Similarity=0.129 Sum_probs=76.2
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccc
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEA 358 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~ 358 (470)
-|+|-|-+||.. +....+++...|+..|.++-+.+-.- . ..|+.+.+... +.. =..++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-H--------R~p~~l~~~~~----------~a~-~~g~~ 70 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA-H--------RTPDRMFEYAK----------NAE-ERGIE 70 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT-T--------TCHHHHHHHHH----------HTT-TTTCC
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-c--------CCHHHHHHHHH----------HHH-hCCCc
Confidence 367888889877 56678889999999998876655433 2 44544432110 000 01133
Q ss_pred cccceeccCch----hhhhhhhcCCcEeeccccch--hhHHH-HHHHhhh--cceeEe-eecCCCCcCHHHHHHHHHHHh
Q 041902 359 VGCFVTHCGWN----SSLESLVCGVPVVAFPQWTD--QGTNA-KIIVDFC--KTGVRV-KANEEGILESDEIKRCLELVM 428 (470)
Q Consensus 359 v~~~ItHGG~g----t~~eal~~GvP~v~~P~~~D--Q~~nA-~rl~~~~--GvG~~l-~~~~~~~~~~~~l~~~i~~vl 428 (470)
| +|.=+|.. ++..++ .-+|++.+|.... ....+ .-+.+ . |+.+.. .. ++.++...+...|. -+
T Consensus 71 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~ 143 (183)
T 1o4v_A 71 V--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GI 143 (183)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HT
T ss_pred E--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hc
Confidence 4 55544433 333333 5688888887542 22222 11222 3 433211 11 13344455554444 34
Q ss_pred cCCHHHHHHHHHHHHHHHHHHh
Q 041902 429 GEGDEFRGNSLKWKDLAREAAK 450 (470)
Q Consensus 429 ~~~~~~r~~a~~~~~~~~~~~~ 450 (470)
. |+.++++.+.+++...+.+.
T Consensus 144 ~-d~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 144 K-YPEIARKVKEYKERMKREVL 164 (183)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHHHHH
Confidence 5 78888888888887776543
No 133
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=41.69 E-value=19 Score=31.64 Aligned_cols=36 Identities=8% Similarity=-0.021 Sum_probs=31.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
|||.|..-|+-|=..=...||..|+++|++|.++=.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~ 36 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDG 36 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEE
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 788886567888889999999999999999999843
No 134
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=41.26 E-value=14 Score=34.59 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=36.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEE
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFAS 67 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~ 67 (470)
.|||.++=.|+.|- .+|..|.+.||+|+++......+.+ .+ .|+....
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~-~~----~g~~~~~ 50 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLALAGEAINVLARGATLQAL-QT----AGLRLTE 50 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCHHHHHHH-HH----TCEEEEE
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEEChHHHHHH-HH----CCCEEec
Confidence 58999997777773 5688899999999999876555556 44 6776653
No 135
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=40.70 E-value=49 Score=30.57 Aligned_cols=94 Identities=10% Similarity=-0.025 Sum_probs=51.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch-----------hhhcCCCCCCCCceEEEcCCCCCCCCCCC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAY-----------RRMANSPTPEDGLSFASFSDGYDDGFNSK 79 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~-----------~~v~~~~~~~~g~~~~~i~~~~~~~~~~~ 79 (470)
|||+|+-.|..+ ....++|.++||+|..+.+.... +.. +. .|+.++...+.
T Consensus 1 mrivf~gt~~fa-----~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A-~~----~gIpv~~~~~~-------- 62 (305)
T 2bln_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLA-AE----RGIPVYAPDNV-------- 62 (305)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC------CCCCHHHHH-HH----HTCCEECCSCC--------
T ss_pred CEEEEEEcCHHH-----HHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHH-HH----cCCCEECCCcC--------
Confidence 789888654322 34456777889999877664221 122 22 45555432210
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
+. + ++++.+++ .+||+||+-.+. .....+-......++-++++
T Consensus 63 -~~-------------~---~~~~~l~~---~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 63 -NH-------------P---LWVERIAQ---LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp -CS-------------H---HHHHHHHH---TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred -Cc-------------H---HHHHHHHh---cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 00 1 22333333 469999986543 33445555555667887765
No 136
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=40.39 E-value=35 Score=25.99 Aligned_cols=36 Identities=11% Similarity=-0.000 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFA 44 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~ 44 (470)
+.|||+++|..+.|+-.=.-.+-+.+.++|.++.+-
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 458999999999999844446677777788875543
No 137
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=40.34 E-value=1.6e+02 Score=27.49 Aligned_cols=99 Identities=10% Similarity=-0.020 Sum_probs=56.9
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhh
Q 041902 11 PHFLLVTFPAQG--H--INPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRY 86 (470)
Q Consensus 11 ~~il~~~~~~~G--H--~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 86 (470)
.-|++.+..+.. . ..-+..+++.|.++|++|.+.+++...+.+ +......+-..+.+. +..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~-~~i~~~~~~~~~~l~----------g~~---- 250 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMV-QPVVEQMETKPIVAT----------GKF---- 250 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHH-HHHHHTCSSCCEECT----------TCC----
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHH-HHHHHhcccccEEee----------CCC----
Confidence 456666665443 2 245889999999999999998776555433 210000110011110 011
Q ss_pred HHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEec
Q 041902 87 VSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWI 141 (470)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~ 141 (470)
....+.+++. .-|++|+.- .+..++|..+|+|++.++.
T Consensus 251 -------sl~e~~ali~--------~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 251 -------QLGPLAAAMN--------RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp -------CHHHHHHHHH--------TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred -------CHHHHHHHHH--------hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 1122233333 269999852 4678889999999999864
No 138
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.26 E-value=20 Score=28.15 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.|||+++ | .|.+-- .+++.|.++||+|+++...
T Consensus 4 ~m~i~Ii--G-~G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA--G-IGRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE--C-CSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE--C-CCHHHH--HHHHHHHhCCCeEEEEECC
Confidence 5899888 3 366644 4688899999999998653
No 139
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=39.75 E-value=20 Score=33.78 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchhhh
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI-FAYRRM 53 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~-~~~~~v 53 (470)
+.+|||.|+-.|..|. .+|..|.+.||+|+++... ...+.+
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~~ 43 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDIDAQRIKEI 43 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 4468999997666553 4678899999999988653 333444
No 140
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=39.56 E-value=1.2e+02 Score=25.83 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=56.3
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEe-
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIV- 345 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~- 345 (470)
.++..+|.+++ ...||-|.. .......++....+-.+|-+++.. ... .. . ....+.
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e-~~~---------~~----~-~~~~~~~ 104 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDE-EAG---------NP----Y-LSVAVKT 104 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTT-CCC---------CT----T-CSEEEEC
T ss_pred HHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCc-ccC---------CC----C-cceeeec
Confidence 57777887654 455553332 344556666667777888877643 211 00 1 233333
Q ss_pred -eccCh-hh-hccccccccceeccCchhhhh---hhhcCCcEeecc
Q 041902 346 -PWCSQ-VE-VLSHEAVGCFVTHCGWNSSLE---SLVCGVPVVAFP 385 (470)
Q Consensus 346 -~~vp~-~~-vl~~~~v~~~ItHGG~gt~~e---al~~GvP~v~~P 385 (470)
...+. .. +...++ +.++--||.||.-| ++.+++|+++++
T Consensus 105 ~~~f~~Rk~~m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 105 GLDFQMRSFVLLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp CCCHHHHHHHHHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred CCCHHHHHHHHHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEEC
Confidence 23442 33 444444 45778899998665 577999999996
No 141
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=39.42 E-value=72 Score=27.49 Aligned_cols=47 Identities=15% Similarity=0.067 Sum_probs=33.8
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLW 313 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 313 (470)
+-+.+|+.....+.++||..+|......+.+....++++..|..+.+
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 44556765444567999998886544446788899999999987654
No 142
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=39.22 E-value=1.6e+02 Score=24.18 Aligned_cols=140 Identities=11% Similarity=0.109 Sum_probs=73.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccccc
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAV 359 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v 359 (470)
|.|-|=+||.. +....++....|+..|.++-+.+-.- + ..|+.+.+.. ....--..++|
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-H--------R~p~~~~~~~----------~~a~~~~~~~V 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA-H--------KTAEHVVSML----------KEYEALDRPKL 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-T--------TCHHHHHHHH----------HHHHTSCSCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-c--------CCHHHHHHHH----------HHhhhcCCCcE
Confidence 34666778866 55678889999999998776554433 2 4454443111 10000001344
Q ss_pred ccceeccCch----hhhhhhhcCCcEeeccccc-hhhHHH-HHHHh-hhcceeEeeecCCCCcCHHHHHHHHHHHhcCCH
Q 041902 360 GCFVTHCGWN----SSLESLVCGVPVVAFPQWT-DQGTNA-KIIVD-FCKTGVRVKANEEGILESDEIKRCLELVMGEGD 432 (470)
Q Consensus 360 ~~~ItHGG~g----t~~eal~~GvP~v~~P~~~-DQ~~nA-~rl~~-~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~ 432 (470)
+|.=+|.. ++..++ --+|++.+|... +-.... .-+.+ =.|+.+.--- +.++...+...|.. +. |+
T Consensus 62 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv~---~~~nAa~lA~~Il~-~~-d~ 133 (159)
T 3rg8_A 62 --YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMPSGISPALVL---EPKNAALLAARIFS-LY-DK 133 (159)
T ss_dssp --EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCCTTCCCEECC---SHHHHHHHHHHHHT-TT-CH
T ss_pred --EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCCCCCceEEec---CchHHHHHHHHHHh-CC-CH
Confidence 67666654 333333 558999999542 111111 11111 0144332211 34444444433333 34 78
Q ss_pred HHHHHHHHHHHHHHHH
Q 041902 433 EFRGNSLKWKDLAREA 448 (470)
Q Consensus 433 ~~r~~a~~~~~~~~~~ 448 (470)
.++++.+.++++..+.
T Consensus 134 ~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 134 EIADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998877653
No 143
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=39.04 E-value=1.4e+02 Score=24.13 Aligned_cols=23 Identities=30% Similarity=0.248 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCeEEEEeCccc
Q 041902 27 ALQLARRLIRIGTRVTFATTIFA 49 (470)
Q Consensus 27 ~l~la~~L~~~Gh~V~~~~~~~~ 49 (470)
...+.+.|+++|+.+.++|....
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCc
Confidence 56788899999999999987653
No 144
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.97 E-value=28 Score=28.54 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA 49 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~ 49 (470)
..+++++..|+- +.|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 357888877663 999999999999999999999 5543
No 145
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=38.77 E-value=35 Score=31.72 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=33.8
Q ss_pred cCCC-CEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 7 RQHQ-PHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 7 ~~~~-~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
..+. ++|+|++. |+-|-..=..+||..|+++|++|.++..+.
T Consensus 9 ~~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 9 FNKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CBTTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3344 45655555 888999999999999999999999997764
No 146
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=38.72 E-value=26 Score=32.37 Aligned_cols=46 Identities=26% Similarity=0.260 Sum_probs=35.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEE
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFAS 67 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~ 67 (470)
|||.++-.|+.|- .+|..|.+.||+|+++.... .+.+ ++ .|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i-~~----~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAI-AG----NGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHH-HH----TCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHH-Hh----CCCEEEc
Confidence 7899998888884 46888999999999998776 4666 55 6776654
No 147
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=37.82 E-value=88 Score=30.68 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=21.7
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCCeEEE
Q 041902 111 QPFTCLVYSLLLPWTAEVARAYHLPSALL 139 (470)
Q Consensus 111 ~~pDlvv~d~~~~~~~~~A~~~giP~i~~ 139 (470)
.+||+||.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 46999998853 577899999999985
No 148
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=37.72 E-value=61 Score=24.52 Aligned_cols=42 Identities=17% Similarity=0.055 Sum_probs=31.0
Q ss_pred EEEEEcCCC---ccCHHHHHHHHHHHHhC-CC-eEEEEeCccchhhh
Q 041902 12 HFLLVTFPA---QGHINPALQLARRLIRI-GT-RVTFATTIFAYRRM 53 (470)
Q Consensus 12 ~il~~~~~~---~GH~~P~l~la~~L~~~-Gh-~V~~~~~~~~~~~v 53 (470)
|++|+-..+ .......+.+|..+.+. || +|+++-..+-...+
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 565554432 34457789999999999 99 99999887766666
No 149
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=37.72 E-value=34 Score=27.41 Aligned_cols=35 Identities=20% Similarity=0.181 Sum_probs=29.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.+++++..|+ =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788887766 4899999999999999999998 544
No 150
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=37.44 E-value=51 Score=28.55 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc-hhhhcCCCCCCCCc-eEEEc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA-YRRMANSPTPEDGL-SFASF 68 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~-~~~v~~~~~~~~g~-~~~~i 68 (470)
...|+|++. |+.|.+-. .++++|.++||+|+.++.... .+.+ .. .++ .++..
T Consensus 19 l~~~~ilVt--GatG~iG~--~l~~~L~~~G~~V~~~~R~~~~~~~~-~~----~~~~~~~~~ 72 (236)
T 3e8x_A 19 FQGMRVLVV--GANGKVAR--YLLSELKNKGHEPVAMVRNEEQGPEL-RE----RGASDIVVA 72 (236)
T ss_dssp --CCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESSGGGHHHH-HH----TTCSEEEEC
T ss_pred cCCCeEEEE--CCCChHHH--HHHHHHHhCCCeEEEEECChHHHHHH-Hh----CCCceEEEc
Confidence 345676554 55565543 678889999999999976433 2233 33 456 66544
No 151
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=37.43 E-value=63 Score=28.53 Aligned_cols=26 Identities=27% Similarity=0.387 Sum_probs=20.9
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 21 QGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 21 ~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.|.+- .++|++|.++|++|+++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 56543 467999999999999998764
No 152
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=36.61 E-value=34 Score=26.12 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEE
Q 041902 8 QHQPHFLLVTFPAQGHINPAL-QLARRLIRIGTR-VTFA 44 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l-~la~~L~~~Gh~-V~~~ 44 (470)
.+.+||+++|..+.|.-.=+- .|-+.+.++|.+ +.+-
T Consensus 16 ~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~ 54 (110)
T 3czc_A 16 GSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESA 54 (110)
T ss_dssp --CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 334789999999999888776 777888889987 5544
No 153
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=36.40 E-value=1e+02 Score=26.22 Aligned_cols=118 Identities=11% Similarity=0.009 Sum_probs=0.0
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEee
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVP 346 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~ 346 (470)
.++..++.+++ ..+|+-|.-. ...+...++....+-.++-+++.. ....+.....-...++++
T Consensus 34 ~~lg~~la~~g---~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~----------l~~~e~~~~~~~~~i~~~ 96 (189)
T 3sbx_A 34 GAVGAAIAARG---WTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKM----------LVHRELADHDADELVVTE 96 (189)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETT----------TTTTTTBCTTCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCch----------hhhcccCCCCCCeeEEcC
Q ss_pred ccCh-hhhccccccccceeccCchhhhhhh---------hcCCcEeec---cccchhhHHHHHHHhhhc
Q 041902 347 WCSQ-VEVLSHEAVGCFVTHCGWNSSLESL---------VCGVPVVAF---PQWTDQGTNAKIIVDFCK 402 (470)
Q Consensus 347 ~vp~-~~vl~~~~v~~~ItHGG~gt~~eal---------~~GvP~v~~---P~~~DQ~~nA~rl~~~~G 402 (470)
.... ..+|-..+-+.++--||.||.-|.. .+++|++++ .++.+=..+-..+.+ .|
T Consensus 97 ~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~-~G 164 (189)
T 3sbx_A 97 TMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELAD-TG 164 (189)
T ss_dssp SHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHH-TT
T ss_pred CHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHH-CC
No 154
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=36.35 E-value=20 Score=33.29 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=35.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEE
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFAS 67 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~ 67 (470)
|||.++=.|+.|- .+|..|.+.||+|+++..... +.+ .+ .|++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i-~~----~Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETV-KA----KGIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHH-HH----HCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHH-Hh----CCcEEee
Confidence 7999997777774 567889999999999987763 666 54 5766655
No 155
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=36.16 E-value=39 Score=28.76 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
|||++ +|+.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkvlV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGI--IGATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEE--EcCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 56544 35566554 367889999999999987643
No 156
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=36.15 E-value=2.6e+02 Score=25.65 Aligned_cols=106 Identities=8% Similarity=0.061 Sum_probs=61.1
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC--ccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCC
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATT--IFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQND 82 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~--~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~ 82 (470)
..+++||+++..+. || -+-+|..+...- +.+|..+.+ ++..... +. .|+.++.+|.....
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A-~~----~gIp~~~~~~~~~~-------- 165 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMV-EW----HDIPYYHVPVDPKD-------- 165 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHH-HT----TTCCEEECCCCSSC--------
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHH-HH----cCCCEEEcCCCcCC--------
Confidence 45678998887665 55 344555554432 468887754 3445555 66 89999988643110
Q ss_pred chhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 83 PRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
.. .... ++++.+++ .+||+||.-.+. .....+-..+.-.++-++++
T Consensus 166 -r~-------~~~~---~~~~~l~~---~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 -KE-------PAFA---EVSRLVGH---HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -CH-------HHHH---HHHHHHHH---TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -HH-------HHHH---HHHHHHHH---hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 10 0122 23333333 469999987554 34455555565667776553
No 157
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=36.05 E-value=30 Score=32.44 Aligned_cols=82 Identities=13% Similarity=-0.044 Sum_probs=48.8
Q ss_pred eEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccccc
Q 041902 281 VIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVG 360 (470)
Q Consensus 281 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~ 360 (470)
.|+++-.|-.......+..+...|+..+..+.+..... . + .. ..+. .......+++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~-~-~------~a-~~~~--------------~~~~~~~~d~- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK-I-G------DA-TLEA--------------ERAMHENYDV- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS-T-T------HH-HHHH--------------HHHTTTTCSE-
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC-c-c------hH-HHHH--------------HHHhhcCCCE-
Confidence 45566555432233556778888888877665544433 1 1 11 1111 1111223455
Q ss_pred cceeccCchhhhhhhh------cCCcEeecccc
Q 041902 361 CFVTHCGWNSSLESLV------CGVPVVAFPQW 387 (470)
Q Consensus 361 ~~ItHGG~gt~~eal~------~GvP~v~~P~~ 387 (470)
+|.=||=||+.|++. .++|+.++|.+
T Consensus 84 -vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 84 -LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp -EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred -EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 999999999999853 46899999974
No 158
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=35.94 E-value=3.1e+02 Score=26.63 Aligned_cols=144 Identities=13% Similarity=0.045 Sum_probs=77.3
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhC-CCeEEeeccChhhhccc
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELN-EKGMIVPWCSQVEVLSH 356 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~nv~v~~~vp~~~vl~~ 356 (470)
+++++.|..|.++ ...+..|...|..+.++-+.. . +.+.+... .++.+..---...-|..
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~-----------~-~~~~~l~~~~~i~~~~~~~~~~~l~~ 72 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF-----------I-PQFTVWANEGMLTLVEGPFDETLLDS 72 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC-----------C-HHHHHHHTTTSCEEEESSCCGGGGTT
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC-----------C-HHHHHHHhcCCEEEEECCCCccccCC
Confidence 4568888888765 234555667887776655422 1 12222222 34544421112233455
Q ss_pred cccccceeccCchh-----hhhhhhcCCcEeeccccchhhHHHHHH-----Hh-hhcceeEeeecCCCCcCHHHHHHHHH
Q 041902 357 EAVGCFVTHCGWNS-----SLESLVCGVPVVAFPQWTDQGTNAKII-----VD-FCKTGVRVKANEEGILESDEIKRCLE 425 (470)
Q Consensus 357 ~~v~~~ItHGG~gt-----~~eal~~GvP~v~~P~~~DQ~~nA~rl-----~~-~~GvG~~l~~~~~~~~~~~~l~~~i~ 425 (470)
+++ +|.--|.-. ..+|-..|+|+-++ |++..+... .+ -+-+|+. ++.....-...|++.|+
T Consensus 73 ~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIs--T~Gksp~la~~ir~~ie 144 (457)
T 1pjq_A 73 CWL--AIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE 144 (457)
T ss_dssp CSE--EEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEE--CTTSCHHHHHHHHHHHH
T ss_pred ccE--EEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEE--CCCCChHHHHHHHHHHH
Confidence 666 888777764 44566778886332 333333222 12 0234444 42212222578888888
Q ss_pred HHhcCC-HHHHHHHHHHHHHHHHH
Q 041902 426 LVMGEG-DEFRGNSLKWKDLAREA 448 (470)
Q Consensus 426 ~vl~~~-~~~r~~a~~~~~~~~~~ 448 (470)
..|.++ ..+.+.+.++++++++.
T Consensus 145 ~~l~~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 145 SLLPQHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HhcchhHHHHHHHHHHHHHHHHhh
Confidence 888722 25667777777777654
No 159
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=35.45 E-value=49 Score=29.06 Aligned_cols=29 Identities=17% Similarity=0.132 Sum_probs=24.9
Q ss_pred cccccceeccCchhhhhhhhcCCcEeeccccc
Q 041902 357 EAVGCFVTHCGWNSSLESLVCGVPVVAFPQWT 388 (470)
Q Consensus 357 ~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~ 388 (470)
+++ +|+.||........ ..+|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 667 99999999999975 579999999753
No 160
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.10 E-value=60 Score=28.22 Aligned_cols=64 Identities=9% Similarity=0.088 Sum_probs=41.6
Q ss_pred CCCeeEeccccCCCccCCcccCCCCCCCCCChhHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCC--CEE
Q 041902 235 KFNMIAIGPLVASALWDGKELYGGDLCKNSSKEYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGH--PFL 312 (470)
Q Consensus 235 ~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~--~~i 312 (470)
++.+++.|.-.+. +++.+-....... +|.+|+.+........+..+++.++..+. ++-
T Consensus 120 G~~Vi~LG~~vp~-------------------e~iv~~~~~~~~d-~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~ 179 (215)
T 3ezx_A 120 GFQIVDLGVDVLN-------------------ENVVEEAAKHKGE-KVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVK 179 (215)
T ss_dssp SCEEEECCSSCCH-------------------HHHHHHHHHTTTS-CEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSE
T ss_pred CCeEEEcCCCCCH-------------------HHHHHHHHHcCCC-EEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCE
Confidence 6789999976654 6666566554443 78875444444445568889999988875 554
Q ss_pred EEEecC
Q 041902 313 WVIREH 318 (470)
Q Consensus 313 ~~~~~~ 318 (470)
+.++..
T Consensus 180 v~vGG~ 185 (215)
T 3ezx_A 180 CMFGGA 185 (215)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 555544
No 161
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=34.92 E-value=18 Score=33.60 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
..+|||.|+-.|+.| ..+|..|++.||+|++...+...+.+
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i 57 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAI 57 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHH
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHH
Confidence 356899999888777 45788899999999999555555555
No 162
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=34.83 E-value=30 Score=31.07 Aligned_cols=42 Identities=21% Similarity=0.037 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCCccCH---HHHHHHHHHHHhCCCeEEEEeCccch
Q 041902 9 HQPHFLLVTFPAQGHI---NPALQLARRLIRIGTRVTFATTIFAY 50 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~---~P~l~la~~L~~~Gh~V~~~~~~~~~ 50 (470)
.+||.+|++.+.-+-+ .-.-.|+.-|+.||++|+.+=.+.+.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 4589999999766544 55678999999999999998655544
No 163
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=34.61 E-value=36 Score=31.41 Aligned_cols=34 Identities=12% Similarity=-0.038 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA 49 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~ 49 (470)
+|+|+++..+ -...++++++++||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 5899998876 456889999999999999877654
No 164
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=34.54 E-value=43 Score=29.41 Aligned_cols=35 Identities=6% Similarity=-0.066 Sum_probs=29.0
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEE
Q 041902 10 QPHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFA 44 (470)
Q Consensus 10 ~~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~ 44 (470)
+|+.+|++. +.-|-..=.+.|++.|+++|++|.++
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 566666655 45688999999999999999999997
No 165
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=34.46 E-value=30 Score=30.96 Aligned_cols=40 Identities=18% Similarity=0.082 Sum_probs=30.6
Q ss_pred CCCCEEEEE-cC-CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLV-TF-PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~-~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.+.++++.+ +. |+-|=..=...||..|+++|++|.++=.+
T Consensus 15 ~~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 15 GKIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp TTCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ccCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 344555444 33 77789999999999999999999998543
No 166
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=33.94 E-value=49 Score=30.89 Aligned_cols=81 Identities=12% Similarity=-0.030 Sum_probs=48.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccc
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEA 358 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~ 358 (470)
+-.|+++--|-.. +.+..+...|...+..+.+..... . . .. ..+. ...+...++
T Consensus 31 ~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~-~-~------~~-~~~~--------------~~~~~~~~d 84 (332)
T 2bon_A 31 ASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE-K-G------DA-ARYV--------------EEARKFGVA 84 (332)
T ss_dssp CEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS-T-T------HH-HHHH--------------HHHHHHTCS
T ss_pred eEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC-c-c------hH-HHHH--------------HHHHhcCCC
Confidence 3345556544332 456778888888888876655433 1 1 11 1110 111122345
Q ss_pred cccceeccCchhhhhhh--------hcCCcEeecccc
Q 041902 359 VGCFVTHCGWNSSLESL--------VCGVPVVAFPQW 387 (470)
Q Consensus 359 v~~~ItHGG~gt~~eal--------~~GvP~v~~P~~ 387 (470)
+ +|.-||-||+.|++ ..++|+.++|.+
T Consensus 85 ~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 85 T--VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp E--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred E--EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 5 99999999999985 357899999964
No 167
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=33.88 E-value=2.7e+02 Score=25.24 Aligned_cols=108 Identities=12% Similarity=0.081 Sum_probs=61.5
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCc--cchhhhcCCCCCCCCceEEEcCCCCCCCCCCCC
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTI--FAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQ 80 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~--~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~ 80 (470)
+...+++||+++..+. || -+-+|..+...- ..+|..+.+. ...... +. .|+.++.+|.....
T Consensus 85 ~~~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A-~~----~gIp~~~~~~~~~~------ 150 (286)
T 3n0v_A 85 TAPNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLA-HW----HKIPYYHFALDPKD------ 150 (286)
T ss_dssp ECTTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHH-HH----TTCCEEECCCBTTB------
T ss_pred ecCCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHH-HH----cCCCEEEeCCCcCC------
Confidence 3456678998877766 54 334444444332 3688777543 344444 66 89999988753210
Q ss_pred CCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 81 NDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. ......+.+.+++ .+||+||.-.+. .....+-..+.-.++-++++
T Consensus 151 ---r-------~~~~~~~~~~l~~------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 151 ---K-------PGQERKVLQVIEE------TGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ---H-------HHHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ---H-------HHHHHHHHHHHHh------cCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 1 1112223333333 359999987554 44555666666677776553
No 168
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=33.81 E-value=78 Score=28.15 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=28.5
Q ss_pred CEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQ----------G-HINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~----------G-H~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+|||++..... | ...=++.--..|++.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58988887742 3 2445777788999999999999864
No 169
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=33.73 E-value=51 Score=29.48 Aligned_cols=48 Identities=17% Similarity=0.107 Sum_probs=32.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch-hhhcCCCCCCCCceEEEc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAY-RRMANSPTPEDGLSFASF 68 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~-~~v~~~~~~~~g~~~~~i 68 (470)
|||++. |+ |.+-. .|+++|.++||+|+.++..... ..+ .. .+++++..
T Consensus 6 ~~ilVt--Ga-G~iG~--~l~~~L~~~g~~V~~~~r~~~~~~~~-~~----~~~~~~~~ 54 (286)
T 3ius_A 6 GTLLSF--GH-GYTAR--VLSRALAPQGWRIIGTSRNPDQMEAI-RA----SGAEPLLW 54 (286)
T ss_dssp CEEEEE--TC-CHHHH--HHHHHHGGGTCEEEEEESCGGGHHHH-HH----TTEEEEES
T ss_pred CcEEEE--CC-cHHHH--HHHHHHHHCCCEEEEEEcChhhhhhH-hh----CCCeEEEe
Confidence 576655 36 77654 5678899999999999765433 233 33 56777654
No 170
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=33.64 E-value=64 Score=27.46 Aligned_cols=49 Identities=10% Similarity=-0.041 Sum_probs=31.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccch-hhhcCCCCCCCCceEEEc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAY-RRMANSPTPEDGLSFASF 68 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~-~~v~~~~~~~~g~~~~~i 68 (470)
|||++ +|+.|.+- ..|+++|.++||+|+.++-.... ..+ .. .++.++..
T Consensus 1 MkilV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~----~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAV--LGATGRAG--SAIVAEARRRGHEVLAVVRDPQKAADR-LG----ATVATLVK 50 (224)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESCHHHHHHH-TC----TTSEEEEC
T ss_pred CEEEE--EcCCCHHH--HHHHHHHHHCCCEEEEEEecccccccc-cC----CCceEEec
Confidence 56443 45666654 46788899999999999765332 223 33 56766654
No 171
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=33.60 E-value=64 Score=28.64 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQ----------G-HINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~----------G-H~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.+|||++..... | ...=++.-...|++.|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358888887642 2 2244677788999999999999875
No 172
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=33.55 E-value=47 Score=33.76 Aligned_cols=41 Identities=7% Similarity=-0.054 Sum_probs=36.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.++.+||+.+.++..|-....-++..|..+|++|...+...
T Consensus 96 ~~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 96 KTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp CCSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 34679999999999999999999999999999999986653
No 173
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=33.47 E-value=34 Score=31.87 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=24.6
Q ss_pred CccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 1 MEQEQHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
|...+..+.+|+|++. |+.|.+-. .|+++|.++||+|+.++-..
T Consensus 1 M~~s~~~M~~~~IlVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 1 MTVSPVPSPKGRVLIA--GATGFIGQ--FVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ----------CCEEEE--CTTSHHHH--HHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCCCCCCCeEEEE--CCCcHHHH--HHHHHHHHCCCCEEEEECCC
Confidence 4444444445676554 55665543 56788999999999997654
No 174
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=32.73 E-value=2.3e+02 Score=24.97 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHIN-PALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~-P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
|||+++---+.-++. .+...++.+..-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 788888777776664 4555777666666777666543
No 175
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=32.53 E-value=27 Score=27.61 Aligned_cols=48 Identities=13% Similarity=0.218 Sum_probs=30.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc-chhhhcCCCCCCCCceEEE
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF-AYRRMANSPTPEDGLSFAS 67 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~-~~~~v~~~~~~~~g~~~~~ 67 (470)
.+||+++-. |.+ -..+|+.|.++||+|+.+-... ..+.+ .. .|+.++.
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~~~~~~~-~~----~~~~~~~ 54 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSKEKIELL-ED----EGFDAVI 54 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCHHHHHHH-HH----TTCEEEE
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCHHHHHHH-HH----CCCcEEE
Confidence 357777754 443 2468899999999999986543 22333 33 4555543
No 176
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=32.35 E-value=61 Score=27.65 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=29.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQ-LARRLIRIGTRVTFATT 46 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~-la~~L~~~Gh~V~~~~~ 46 (470)
+..|||+++.+...|+..-+.. +++.|.+.|++|.++--
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 4568999988877888777664 46777778999988743
No 177
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=32.34 E-value=49 Score=29.08 Aligned_cols=108 Identities=10% Similarity=0.076 Sum_probs=65.0
Q ss_pred cCHHHHHHHHHHHHhC-CCeEEEEeCccchhhhcCCCCCCCCceEEEcCCC-------CC--CCCCCC------CCCchh
Q 041902 22 GHINPALQLARRLIRI-GTRVTFATTIFAYRRMANSPTPEDGLSFASFSDG-------YD--DGFNSK------QNDPRR 85 (470)
Q Consensus 22 GH~~P~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~-------~~--~~~~~~------~~~~~~ 85 (470)
|.+.-.+.+|+++... |.+|.+. -..+...+.+. .++..+.++.. +. ...... .+. ..
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIIS-RGgta~~Lr~~----~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~-~~ 119 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIA-AGSNGAYLKSR----LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQET-IP 119 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEE-EHHHHHHHHTT----CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSC-CH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEe-CChHHHHHHhh----CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchh-hh
Confidence 5567778888887665 5875555 44444444244 56777777521 00 000011 222 12
Q ss_pred hHHHHHHH-----------hHHHHHHHHHhhhhcCCCCccEEEeCCCchhHHHHHHHcCCCeEEEec
Q 041902 86 YVSEFKRR-----------SSEALTEIITGSENQGAQPFTCLVYSLLLPWTAEVARAYHLPSALLWI 141 (470)
Q Consensus 86 ~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~ 141 (470)
-+..+... ..+.+...++.++++| .|+||.+. .+..+|+++|+|.+.+..
T Consensus 120 ~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G---~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 120 ALVAFQKTFNLRLDQRSYITEEDARGQINELKANG---TEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTT---CCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCC---CCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 22222221 3566778888888854 99999983 468999999999999874
No 178
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=32.31 E-value=2.9e+02 Score=25.08 Aligned_cols=108 Identities=12% Similarity=0.084 Sum_probs=59.3
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCc---cchhhhcCCCCCCCCceEEEcCCCCCCCCCCC
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTI---FAYRRMANSPTPEDGLSFASFSDGYDDGFNSK 79 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~---~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~ 79 (470)
+...+++||+++..+. || -+-+|..+..+- ..+|..+.+. ...+.. +. .|+.++.+|....
T Consensus 84 ~~~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A-~~----~gIp~~~~~~~~~------ 149 (288)
T 3obi_A 84 RDRETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGF-DF----GDIPFYHFPVNKD------ 149 (288)
T ss_dssp EETTSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCT-TT----TTCCEEECCCCTT------
T ss_pred eccCCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHH-HH----cCCCEEEeCCCcc------
Confidence 3445678998777665 54 233444444332 2467666542 333333 55 8999998875321
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. . ..... ++++.+++ .++|+||.-.+. .....+-..+.-.++-++++
T Consensus 150 --~-r-------~~~~~---~~~~~l~~---~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 150 --T-R-------RQQEA---AITALIAQ---THTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp --T-H-------HHHHH---HHHHHHHH---HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --c-H-------HHHHH---HHHHHHHh---cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0 1 11122 23333333 359999987554 44556666666677776553
No 179
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=32.16 E-value=29 Score=32.95 Aligned_cols=29 Identities=28% Similarity=0.264 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFA 44 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~ 44 (470)
|||+++=.|--| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 888888666555 67788899999999987
No 180
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=32.15 E-value=93 Score=26.68 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=56.4
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEee
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVP 346 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~ 346 (470)
.++..++.+++ ...|+-|.-. .......++....+-.++-+++.. ..+. ..+.. .-...++++
T Consensus 43 ~~lg~~La~~g---~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~-l~~~-----e~~~~----~~~~~i~~~ 105 (199)
T 3qua_A 43 AEVGSSIAARG---WTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKA-LVHR-----ELADV----DAAELIVTD 105 (199)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGG-GTTT-----TTBCT----TSSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCch-hhhc-----cccCC----CCCeeEEcC
Confidence 46667776654 3445554421 344556666667777777776643 1000 11100 013344455
Q ss_pred ccCh--hhhccccccccceeccCchhhhhhhh---------cCCcEeeccc
Q 041902 347 WCSQ--VEVLSHEAVGCFVTHCGWNSSLESLV---------CGVPVVAFPQ 386 (470)
Q Consensus 347 ~vp~--~~vl~~~~v~~~ItHGG~gt~~eal~---------~GvP~v~~P~ 386 (470)
.... ..++.++++ .++--||.||.-|... +++|++++-.
T Consensus 106 ~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 106 TMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp SHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred CHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 5433 233445554 5778899999887742 6899998853
No 181
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=31.86 E-value=56 Score=24.95 Aligned_cols=40 Identities=10% Similarity=0.011 Sum_probs=24.5
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 041902 6 HRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFAT 45 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~ 45 (470)
...++|||+++|..+-+--.=.-.+-+...++|.+|....
T Consensus 2 ~~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 2 NASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp ---CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 3567899999999775443322233444445799888864
No 182
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=31.67 E-value=44 Score=30.24 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=28.2
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 041902 11 PHFL-LVTFPAQGHINPALQLARRLIRIGTRVTFA 44 (470)
Q Consensus 11 ~~il-~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~ 44 (470)
|+++ |..-|+-|-..=...||..|+++|++|.++
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlli 36 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIV 36 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 5554 444477889999999999999999999988
No 183
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=31.63 E-value=2e+02 Score=24.88 Aligned_cols=104 Identities=5% Similarity=0.049 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCcc--c--hhhhcCCCCCCCCceEEEcCCC-CCCCCCCCCCC
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIR-IGTRVTFATTIF--A--YRRMANSPTPEDGLSFASFSDG-YDDGFNSKQND 82 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~-~Gh~V~~~~~~~--~--~~~v~~~~~~~~g~~~~~i~~~-~~~~~~~~~~~ 82 (470)
++|||+++..+..+.+.-++ ++..+ .+++|..+.+.. . .+.. +. .|+.++.++.. ++.
T Consensus 4 ~~~riavl~SG~Gsnl~all---~~~~~~~~~eI~~Vis~~~~a~~~~~A-~~----~gIp~~~~~~~~~~~-------- 67 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAII---GAIQKGLAIEIRAVISNRADAYGLKRA-QQ----ADIPTHIIPHEEFPS-------- 67 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHH---HHHHTTCSEEEEEEEESCTTCHHHHHH-HH----TTCCEEECCGGGSSS--------
T ss_pred CCcEEEEEEeCCcHHHHHHH---HHHHcCCCCEEEEEEeCCcchHHHHHH-HH----cCCCEEEeCccccCc--------
Confidence 46799887776654444444 33333 368888876532 2 2234 55 78888877532 111
Q ss_pred chhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 83 PRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
.. .... ++++.+++ .+||+||+-.+. .....+-....-.++-++++
T Consensus 68 -r~-------~~d~---~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -RT-------DFES---TLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -HH-------HHHH---HHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -hh-------HhHH---HHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 10 0112 33344443 569999997554 34455556666677777654
No 184
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=31.62 E-value=31 Score=31.61 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=23.0
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
++..++++.++++ |+.|.+- ..|+++|.++||+|+.+...
T Consensus 6 ~~~~~~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 6 HHHHHGSMRALIT-GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp -------CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cccccCcceEEEE-CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 5555665555555 4556554 35788899999999987643
No 185
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=31.55 E-value=42 Score=29.90 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=27.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 041902 13 FLLVTFPAQGHINPALQLARRLIRIGTRVTFAT 45 (470)
Q Consensus 13 il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~ 45 (470)
|.|..-|+-|-..=...||..|+++|++|.++=
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD 36 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVG 36 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEc
Confidence 444444778899999999999999999999883
No 186
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=31.40 E-value=38 Score=33.65 Aligned_cols=54 Identities=15% Similarity=0.232 Sum_probs=35.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCC--CCCCC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSD--GYDDG 75 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~--~~~~~ 75 (470)
+++|+-. .+=.-++.+|+.|.+.|+++. ++....+.+ +. .|+.+..+.+ ++|+.
T Consensus 25 ~raLISV----~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L-~e----~GI~v~~V~kvTgfPEi 80 (534)
T 4ehi_A 25 MRALLSV----SDKEGIVEFGKELENLGFEIL--STGGTFKLL-KE----NGIKVIEVSDFTKSPEL 80 (534)
T ss_dssp CEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHH-HH----TTCCCEECBCCC-----
T ss_pred cEEEEEE----cccccHHHHHHHHHHCCCEEE--EccHHHHHH-HH----CCCceeehhhccCCchh
Confidence 4555444 344558899999999999875 566677777 66 7888887753 44443
No 187
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=31.12 E-value=45 Score=28.25 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=23.0
Q ss_pred cccccCC-CCEEEEEcCCCccCHHHHH-HHHHHHHhC---CCeEEEEeCc
Q 041902 3 QEQHRQH-QPHFLLVTFPAQGHINPAL-QLARRLIRI---GTRVTFATTI 47 (470)
Q Consensus 3 ~~~~~~~-~~~il~~~~~~~GH~~P~l-~la~~L~~~---Gh~V~~~~~~ 47 (470)
..|.|.. ++||||+|.+=..= +|+. .|.+.+... +.+|.-+++.
T Consensus 26 ~~~~m~~~~~~VLFVC~gNiCR-SpmAEai~r~~~~~~g~~~~v~SAGt~ 74 (184)
T 4etn_A 26 GGQQMGRGSMDIIFVCTGNTSR-SPMAEALFKSIAEREGLNVNVRSAGVF 74 (184)
T ss_dssp --------CEEEEEEESSSSSH-HHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CccccCCCCCEEEEECCCchhH-HHHHHHHHHHHHHhcCCcEEEEeeecC
Confidence 3444443 58999999875554 4444 466766653 4555555543
No 188
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.78 E-value=96 Score=24.84 Aligned_cols=44 Identities=25% Similarity=0.249 Sum_probs=31.3
Q ss_pred CCEEEEEcC-CCccCHH--HHHHHHHHHHhCCCeE-EEEeCccchhhh
Q 041902 10 QPHFLLVTF-PAQGHIN--PALQLARRLIRIGTRV-TFATTIFAYRRM 53 (470)
Q Consensus 10 ~~~il~~~~-~~~GH~~--P~l~la~~L~~~Gh~V-~~~~~~~~~~~v 53 (470)
.||++|+.. +.+|+-. -.+.+|.++.+.||+| .++-..+-....
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a 59 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNA 59 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHH
Confidence 478866555 6667554 3578899999999999 777666555554
No 189
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=30.68 E-value=67 Score=30.20 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=33.8
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 9 HQPHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 9 ~~~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
+.++|+|++. |+-|-..=..+||..|+++|++|.++..+.
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3456666666 888999999999999999999999998765
No 190
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=30.49 E-value=41 Score=30.62 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
.++|||.|+-.|..|. .+++.|.+.||+|++...
T Consensus 2 ~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp --CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 4568999997666664 357888899999987754
No 191
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=30.35 E-value=49 Score=27.42 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=28.6
Q ss_pred CEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQ--G-HINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~--G-H~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.+|+++|.=+. . --++.-.|++.|.++|.+|.|+.+|-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 47777765221 1 23688899999999999999998874
No 192
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=30.05 E-value=58 Score=29.15 Aligned_cols=46 Identities=26% Similarity=0.265 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASF 68 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i 68 (470)
.|+||+. |+ |.+-. .|+++|.++||+|+.++..... + . .++.++..
T Consensus 3 ~~~ilVt--Ga-G~iG~--~l~~~L~~~g~~V~~~~r~~~~--~--~----~~~~~~~~ 48 (286)
T 3gpi_A 3 LSKILIA--GC-GDLGL--ELARRLTAQGHEVTGLRRSAQP--M--P----AGVQTLIA 48 (286)
T ss_dssp CCCEEEE--CC-SHHHH--HHHHHHHHTTCCEEEEECTTSC--C--C----TTCCEEEC
T ss_pred CCcEEEE--CC-CHHHH--HHHHHHHHCCCEEEEEeCCccc--c--c----cCCceEEc
Confidence 4677766 35 75543 5788899999999998654221 1 1 56776654
No 193
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=29.91 E-value=75 Score=26.46 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
|+|++. |+.|.+- ..++++|.++||+|+.+...
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 676654 5556554 46788899999999998754
No 194
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=29.91 E-value=58 Score=30.15 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
...|+|.|+=.|..| ..+|+.|++.||+|++....
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 345799999777766 56888899999999988543
No 195
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.81 E-value=50 Score=27.45 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=28.7
Q ss_pred CEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQ--G-HINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~--G-H~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.+|+++|.=+. . --++.-.|++.|.++|.+|.|+.+|-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 47777765221 2 23688899999999999999998774
No 196
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=29.74 E-value=1.3e+02 Score=23.95 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=59.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHH
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEF 90 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (470)
.. +|++... .+=.-++.+|+.|.+.||++. ++....+.+ +. .|+....+...- .+. +
T Consensus 25 ~g-vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L-~~----~Gi~v~~v~k~~-egg----~--------- 81 (143)
T 2yvq_A 25 KG-ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWL-NA----NNVPATPVAWPS-QEG----Q--------- 81 (143)
T ss_dssp SE-EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHH-HH----TTCCCEEECCGG-GC---------------
T ss_pred CC-EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHH-HH----cCCeEEEEEecc-CCC----c---------
Confidence 35 5666543 456778999999999999743 444556677 66 677776664321 110 0
Q ss_pred HHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc--------hhHHHHHHHcCCCeEE
Q 041902 91 KRRSSEALTEIITGSENQGAQPFTCLVYSLLL--------PWTAEVARAYHLPSAL 138 (470)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~--------~~~~~~A~~~giP~i~ 138 (470)
....+.+.++++. .+.|+||...-- +.....|-.+|||+++
T Consensus 82 -~~~~~~i~d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 -NPSLSSIRKLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp ----CBCHHHHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred -ccccccHHHHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0000223344333 579999986432 2456778889999987
No 197
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=29.74 E-value=51 Score=30.63 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=35.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc---chhhhcCCCCCCCCceEE
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF---AYRRMANSPTPEDGLSFA 66 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~---~~~~v~~~~~~~~g~~~~ 66 (470)
+..+||.|+-.++.| +-.+|+-|+++||+|+..=... ..+.+ +. .|+.+.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~~~~~~~~~L-~~----~gi~v~ 54 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAKMYPPMSTQL-EA----LGIDVY 54 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESSCCTTHHHHH-HH----TTCEEE
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCCCCcHHHHHH-Hh----CCCEEE
Confidence 345799999999888 4468999999999999874322 23344 44 566654
No 198
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=29.40 E-value=1.7e+02 Score=22.17 Aligned_cols=60 Identities=7% Similarity=-0.027 Sum_probs=35.5
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWK 442 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~ 442 (470)
...|.+++--..|.......+.. .|+--.+. ..++.++|..+|++++. ....++..+++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~----KP~~~~~L~~~i~~~~~-~~~~~~~~~~~~ 130 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT----KPWHPEQLLSSARNAAR-MFTLARENERLS 130 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc----CCCCHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 35677776544444444444443 34534444 35899999999999988 444433333333
No 199
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=29.08 E-value=44 Score=29.62 Aligned_cols=39 Identities=23% Similarity=0.281 Sum_probs=30.1
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVT--FPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~--~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
++|+++.+. -|+-|-..=...||..|+++|++|.++=.+
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 345665554 367788899999999999999999998544
No 200
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=29.00 E-value=89 Score=26.09 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=26.6
Q ss_pred ccCCCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 6 HRQHQPHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 6 ~~~~~~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.|.+..|++++-. .++ .-.=++.-...|.+.|++|++++...
T Consensus 3 ~m~~t~~~v~il~~~gF-e~~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 3 AMGKTNNILYVMSGQNF-QDEEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp --CCCCEEEEECCSEEE-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccccCCCEEEEECCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4566666655543 322 23345666788999999999998654
No 201
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=28.93 E-value=66 Score=25.84 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=31.2
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 14 LLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 14 l~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
+++..+..-.+.+.+.+|...++.|++|+++.+..-...+
T Consensus 12 II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 12 IIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp EEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 3444455677889999999999999999999887665544
No 202
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.88 E-value=39 Score=29.88 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
..+|||.|+-.|..|- .||..|+++||+|+.+...
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 3568999999998885 5888999999999987664
No 203
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=28.77 E-value=22 Score=32.31 Aligned_cols=28 Identities=7% Similarity=0.153 Sum_probs=23.9
Q ss_pred cccccceeccCchhhhhhhhc------CCcEeeccc
Q 041902 357 EAVGCFVTHCGWNSSLESLVC------GVPVVAFPQ 386 (470)
Q Consensus 357 ~~v~~~ItHGG~gt~~eal~~------GvP~v~~P~ 386 (470)
+++ +|+=||-||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 566 9999999999998765 889988874
No 204
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=28.72 E-value=39 Score=28.90 Aligned_cols=30 Identities=3% Similarity=0.119 Sum_probs=25.5
Q ss_pred ccccccceeccCchhhhhhhhcCCcEeeccccc
Q 041902 356 HEAVGCFVTHCGWNSSLESLVCGVPVVAFPQWT 388 (470)
Q Consensus 356 ~~~v~~~ItHGG~gt~~eal~~GvP~v~~P~~~ 388 (470)
.+++ +|+.||........ ..+|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4667 99999999999975 579999999864
No 205
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=28.68 E-value=1.7e+02 Score=26.55 Aligned_cols=78 Identities=13% Similarity=0.017 Sum_probs=50.9
Q ss_pred CCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEE
Q 041902 38 GTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLV 117 (470)
Q Consensus 38 Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv 117 (470)
..+..+++++.+.-.. +. .|++.+.+.. ..+ ..++ ....+.++++.+++ .+..+|+
T Consensus 178 ~~~~~v~~H~af~Yf~-~~----yGl~~~~~~~-~~~----~~ep-----------s~~~l~~l~~~ik~---~~v~~if 233 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLA-KR----FGLKQLGISG-ISP----EQEP-----------SPRQLKEIQDFVKE---YNVKTIF 233 (286)
T ss_dssp SCCEEEEEESCCHHHH-HH----TTCEEEEEEC-SCC-------C-----------CHHHHHHHHHHHHH---TTCCEEE
T ss_pred CCCEEEEECCchHHHH-HH----CCCeEeeccc-cCC----CCCC-----------CHHHHHHHHHHHHH---cCCCEEE
Confidence 3444556667777777 66 7888877542 111 1111 34555666676766 4599999
Q ss_pred eCCCch--hHHHHHHHcCCCeEEE
Q 041902 118 YSLLLP--WTAEVARAYHLPSALL 139 (470)
Q Consensus 118 ~d~~~~--~~~~~A~~~giP~i~~ 139 (470)
++..+. .+..+|+..|++.+.+
T Consensus 234 ~e~~~~~~~~~~la~~~g~~v~~l 257 (286)
T 3gi1_A 234 AEDNVNPKIAHAIAKSTGAKVKTL 257 (286)
T ss_dssp ECTTSCTHHHHHHHHTTTCEEEEC
T ss_pred EeCCCChHHHHHHHHHhCCeEEEe
Confidence 997654 4577899999998875
No 206
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=27.98 E-value=80 Score=22.40 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=35.1
Q ss_pred hcCCcEeeccccchhhHHHH---HHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhc
Q 041902 376 VCGVPVVAFPQWTDQGTNAK---IIVDFCKTGVRVKANEEGILESDEIKRCLELVMG 429 (470)
Q Consensus 376 ~~GvP~v~~P~~~DQ~~nA~---rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~ 429 (470)
-+|+|.+++--...|.+.-. ...+ -|+...+-+ .-++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakk-egvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKK-EGVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHH-HTCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHh-cCcchhhhc----cCCHHHHHHHHHHHHH
Confidence 36999999887776665432 2233 577777764 6789999999988876
No 207
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=27.86 E-value=85 Score=28.77 Aligned_cols=39 Identities=5% Similarity=-0.101 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 10 QPHFLLVTFPAQGH----INPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 10 ~~~il~~~~~~~GH----~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
++||+++..+-.+- +.---.++++|.+.||+|..+....
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46888888765442 3356789999999999999997543
No 208
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=27.78 E-value=51 Score=28.70 Aligned_cols=39 Identities=13% Similarity=-0.028 Sum_probs=30.6
Q ss_pred CCCEEEEEc-C-CCccCHHHHHHHHHHHHhC-CCeEEEEeCc
Q 041902 9 HQPHFLLVT-F-PAQGHINPALQLARRLIRI-GTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~-~-~~~GH~~P~l~la~~L~~~-Gh~V~~~~~~ 47 (470)
++|+++.+. . |+-|-..=...||..|+++ |++|.++=.+
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 345655443 3 7889999999999999999 9999999554
No 209
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.75 E-value=56 Score=27.89 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
|||++. |+.|-+- ..++++|.++||+|+.+.-..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 565543 5555554 467889999999999987543
No 210
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=27.72 E-value=55 Score=25.52 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=22.9
Q ss_pred HHHHhhhhcCCCCccEEEeCCCch--hHHHHHH---HcCCCeEEE
Q 041902 100 EIITGSENQGAQPFTCLVYSLLLP--WTAEVAR---AYHLPSALL 139 (470)
Q Consensus 100 ~~~~~l~~~~~~~pDlvv~d~~~~--~~~~~A~---~~giP~i~~ 139 (470)
+.++.+.+ .+||+||.|...+ -|..+++ ..++|++.+
T Consensus 44 eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 44 EALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 33444444 5799999997665 2333333 468997764
No 211
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=27.34 E-value=41 Score=31.29 Aligned_cols=22 Identities=18% Similarity=0.128 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCCeEEEEeCcc
Q 041902 27 ALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 27 ~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
=.++|+++.++|++|+|+..+.
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHCCCEEEEEecCC
Confidence 3578999999999999998764
No 212
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=27.34 E-value=57 Score=27.66 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=28.7
Q ss_pred CEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQ--G-HINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~--G-H~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.+|+++|.-+. . -.++.-.|++.|.++|.+|.|+.+|-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 47777765221 1 23678899999999999999998874
No 213
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=27.31 E-value=41 Score=30.69 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchhhh
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI-FAYRRM 53 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~-~~~~~v 53 (470)
.|||.|+-.|..|. .+|..|.++||+|+++... ...+.+
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~~~~~~~ 42 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQWPAHIEAI 42 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECCHHHHHHH
Confidence 47999886665553 5688899999999998653 334444
No 214
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=27.23 E-value=48 Score=28.89 Aligned_cols=103 Identities=9% Similarity=0.003 Sum_probs=58.0
Q ss_pred EEEEEcCCCccCHHH----HHHHHHHHHhC-CCeEEEEeCcc----chhhhcCCCCCCCCceEE-EcCCC-CCCCCCCCC
Q 041902 12 HFLLVTFPAQGHINP----ALQLARRLIRI-GTRVTFATTIF----AYRRMANSPTPEDGLSFA-SFSDG-YDDGFNSKQ 80 (470)
Q Consensus 12 ~il~~~~~~~GH~~P----~l~la~~L~~~-Gh~V~~~~~~~----~~~~v~~~~~~~~g~~~~-~i~~~-~~~~~~~~~ 80 (470)
.|+++.--..|.++| ++..|++|++. |-+|+.++-.. ..+.+ -+ .|.+-+ -+.+. +...
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~-~~----~Gad~v~~v~~~~~~~~----- 74 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQI-LP----YGVDKLHVFDAEGLYPY----- 74 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHH-GG----GTCSEEEEEECGGGSSC-----
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHH-Hh----cCCCEEEEecCcccccC-----
Confidence 477777767777765 57788999874 76776664332 12223 22 444322 22211 1110
Q ss_pred CCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCch---hHHHHHHHcCCCeEEE
Q 041902 81 NDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLLP---WTAEVARAYHLPSALL 139 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~~---~~~~~A~~~giP~i~~ 139 (470)
... .....+.++++. .+||+|++..... .+..+|..+++|.+.-
T Consensus 75 -----~~~----~~a~~l~~~i~~------~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 75 -----TSL----PHTSILVNLFKE------EQPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp -----CHH----HHHHHHHHHHHH------HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred -----CHH----HHHHHHHHHHHh------cCCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 011 112233334433 3599999986544 4678899999999874
No 215
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=27.06 E-value=1.3e+02 Score=24.95 Aligned_cols=41 Identities=2% Similarity=-0.132 Sum_probs=30.5
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
+..++||+|+.+++.. ..-+......|...|++|++++...
T Consensus 6 ~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 6 DLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3455799999886554 4456667788899999999998653
No 216
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=27.06 E-value=63 Score=30.43 Aligned_cols=41 Identities=12% Similarity=0.111 Sum_probs=35.1
Q ss_pred CCCCEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCcc
Q 041902 8 QHQPHFLLVTF-PAQGHINPALQLARRLI--RIGTRVTFATTIF 48 (470)
Q Consensus 8 ~~~~~il~~~~-~~~GH~~P~l~la~~L~--~~Gh~V~~~~~~~ 48 (470)
++.++|+|++. |+-|-..-...||..|+ .+|++|.++..+.
T Consensus 15 ~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 15 HDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 34568888777 88899999999999999 8999999998763
No 217
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=27.01 E-value=36 Score=27.02 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=38.4
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhc-ceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCK-TGVRVKANEEGILESDEIKRCLELVMGEGDEFRGNSLKWKDLAR 446 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~G-vG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r~~a~~~~~~~~ 446 (470)
..+|+|++--..+. .......+ .| +--.+. ..++.++|.++|++++. ...+++..+++.+.++
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~-~g~~~~~l~----kP~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAVN-RGKISRFLL----KPWEDEDVFKVVEKGLQ-LAFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHHH-TTCCSEEEE----SSCCHHHHHHHHHHHHH-HHHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCH-HHHHHHHh-ccchheeee----CCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 47888887554443 33344444 56 544555 36899999999999998 6555555444444443
No 218
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=27.00 E-value=2.7e+02 Score=23.06 Aligned_cols=143 Identities=15% Similarity=0.137 Sum_probs=74.6
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccccc
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAV 359 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v 359 (470)
|.|-|=+||.. +....+++...|+..|.++-+.+-.- + ..|+.+.+.. ... --..++|
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-H--------R~p~~~~~~~----------~~a-~~~g~~V 64 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA-H--------RTPKETVEFV----------ENA-DNRGCAV 64 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-T--------TSHHHHHHHH----------HHH-HHTTEEE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc-c--------CCHHHHHHHH----------HHH-HhCCCcE
Confidence 35667788866 56678889999999998876655433 2 4454443111 000 0012344
Q ss_pred ccceeccCchhhhhhh---hcCCcEeeccccc-hhhHHHHHHHhh---hcceeE-eeecCCCCcCHHHHHHHHHHHhcCC
Q 041902 360 GCFVTHCGWNSSLESL---VCGVPVVAFPQWT-DQGTNAKIIVDF---CKTGVR-VKANEEGILESDEIKRCLELVMGEG 431 (470)
Q Consensus 360 ~~~ItHGG~gt~~eal---~~GvP~v~~P~~~-DQ~~nA~rl~~~---~GvG~~-l~~~~~~~~~~~~l~~~i~~vl~~~ 431 (470)
+|.=+|...-+-.+ .--+|++.+|... +-......+.-- .|+.+. +..++.+.++...+...|.. +. |
T Consensus 65 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~-d 140 (169)
T 3trh_A 65 --FIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIA-LQ-D 140 (169)
T ss_dssp --EEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TT-C
T ss_pred --EEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHc-CC-C
Confidence 67666654333222 2358999999753 222222222210 243321 11100011233333333322 45 7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 041902 432 DEFRGNSLKWKDLAREA 448 (470)
Q Consensus 432 ~~~r~~a~~~~~~~~~~ 448 (470)
+.++++.+.++++.++.
T Consensus 141 ~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999888764
No 219
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=26.87 E-value=18 Score=35.78 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
..|||+++-.|-.|. .||+.|...||+|+++=..
T Consensus 2 ~~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-----TLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 579999988777664 5899999999999999543
No 220
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.79 E-value=59 Score=27.67 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=28.8
Q ss_pred CEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQ--G-HINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~--G-H~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.+|+++|.-+. . --++.-.|++.|.++|.+|.|+.+|-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 47788765221 1 23678899999999999999998874
No 221
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=26.76 E-value=27 Score=31.39 Aligned_cols=52 Identities=25% Similarity=0.225 Sum_probs=36.8
Q ss_pred ccccccceeccCchhhhhhhhc---CCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhc
Q 041902 356 HEAVGCFVTHCGWNSSLESLVC---GVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMG 429 (470)
Q Consensus 356 ~~~v~~~ItHGG~gt~~eal~~---GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~ 429 (470)
.+++ +|+=||-||+.+++.. ++|.+.++.. . +|. . ..+.++++.+++++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gf--l------~~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGF--L------TSYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCS--S------CCBCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCc--c------CcCCHHHHHHHHHHHHc
Confidence 4566 9999999999999877 8888888632 1 211 1 12456777778877776
No 222
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=26.52 E-value=68 Score=29.82 Aligned_cols=35 Identities=23% Similarity=0.186 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
++.|||+|+-+|..+- ...++|.++||+|..+.+.
T Consensus 2 ~~mmrIvf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSV-----PVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp CTTSEEEEECCSTTHH-----HHHHHHHHTTCEEEEEECC
T ss_pred CCceEEEEEeCCHHHH-----HHHHHHHHCCCcEEEEEeC
Confidence 4569999998886652 3346777889999988764
No 223
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=26.41 E-value=60 Score=25.71 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=27.1
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPAL-QLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l-~la~~L~~~Gh~V~~~~~~ 47 (470)
||++++-+..+|+..-+. .|++.|.+.|++|.++--.
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 678877777788876655 4567777789999887543
No 224
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=26.37 E-value=67 Score=29.27 Aligned_cols=40 Identities=13% Similarity=0.123 Sum_probs=29.5
Q ss_pred cCCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 7 RQHQPHFL-LVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 7 ~~~~~~il-~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
+.++|+++ |..-|+-|=..=.+.||..|+++|++|.++=.
T Consensus 37 ~~~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~ 77 (307)
T 3end_A 37 KITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGC 77 (307)
T ss_dssp ---CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 34455554 44447778889999999999999999999943
No 225
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=26.37 E-value=60 Score=32.79 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=30.6
Q ss_pred CEEEEEcCCCccCH---HHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHI---NPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~---~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+|.+|++.+..+++ .=...|++.|+++|++|+.+=.+
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~ 51 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKID 51 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecc
Confidence 58899997777766 44678999999999999998665
No 226
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=26.28 E-value=1.2e+02 Score=22.83 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFAT 45 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~ 45 (470)
.+||+++|..+.|--.=.-.+-+.+.++|.++.+..
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a 38 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEA 38 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 468999999888766555577788888998876553
No 227
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=26.10 E-value=47 Score=31.79 Aligned_cols=46 Identities=15% Similarity=0.011 Sum_probs=28.1
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEE
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWV 314 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 314 (470)
..+.+++...+.++++.|+-+++.. ....+.+...|+..+..+.+.
T Consensus 20 ~~l~~~~~~~g~~~~liVtd~~~~~--~g~~~~v~~~L~~~gi~~~~~ 65 (383)
T 3ox4_A 20 EKAIKDLNGSGFKNALIVSDAFMNK--SGVVKQVADLLKAQGINSAVY 65 (383)
T ss_dssp HHHHHTTTTSCCCEEEEEEEHHHHH--TTHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEECCchhh--CchHHHHHHHHHHcCCeEEEE
Confidence 4566666665545566666554331 135677888888888776443
No 228
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=26.01 E-value=2.9e+02 Score=23.12 Aligned_cols=141 Identities=12% Similarity=0.073 Sum_probs=78.3
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccc
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEA 358 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~ 358 (470)
+|+|-|=+||.. +....+.....|+..|..+-+.+-.. . ..|+.+.+... ... -....
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA-H--------Rtp~~l~~~~~----------~a~-~~g~~ 79 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-H--------RTPDYMFEYAE----------TAR-ERGLK 79 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-T--------TSHHHHHHHHH----------HTT-TTTCC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc-c--------cChHHHHHHHH----------HHH-hcCce
Confidence 467888899977 55678889999999998876655443 3 44544432110 000 01123
Q ss_pred cccceeccCch----hhhhhhhcCCcEeeccccch---hhHHHHHHHhhhcceeEeeecCCCCcC------HHHHHHHHH
Q 041902 359 VGCFVTHCGWN----SSLESLVCGVPVVAFPQWTD---QGTNAKIIVDFCKTGVRVKANEEGILE------SDEIKRCLE 425 (470)
Q Consensus 359 v~~~ItHGG~g----t~~eal~~GvP~v~~P~~~D---Q~~nA~rl~~~~GvG~~l~~~~~~~~~------~~~l~~~i~ 425 (470)
| +|.=.|.- ++..+ ..-+|++.+|.... -.+.-.-+.+ .=-|+-+.. -... ..-+...|-
T Consensus 80 V--iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaT---vaig~~ga~NAallA~qIL 152 (181)
T 4b4k_A 80 V--IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVAT---VAIGKAGSTNAGLLAAQIL 152 (181)
T ss_dssp E--EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEE---CCSSHHHHHHHHHHHHHHH
T ss_pred E--EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEE---EecCCccHHHHHHHHHHHH
Confidence 3 55555543 33333 45689999997542 2222333333 334544433 2233 222222222
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHh
Q 041902 426 LVMGEGDEFRGNSLKWKDLAREAAK 450 (470)
Q Consensus 426 ~vl~~~~~~r~~a~~~~~~~~~~~~ 450 (470)
-+. |++++++.+.+++...+.+.
T Consensus 153 -a~~-d~~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 153 -GSF-HDDIHDALELRREAIEKDVR 175 (181)
T ss_dssp -TTT-CHHHHHHHHHHHHHHHHHHH
T ss_pred -ccC-CHHHHHHHHHHHHHHHHHHH
Confidence 145 88999999999988876544
No 229
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=25.91 E-value=83 Score=31.48 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=33.5
Q ss_pred CCEEEEEcCCCccCH---HHHHHHHHHHHhCCCeEEEEeCccchh
Q 041902 10 QPHFLLVTFPAQGHI---NPALQLARRLIRIGTRVTFATTIFAYR 51 (470)
Q Consensus 10 ~~~il~~~~~~~GH~---~P~l~la~~L~~~Gh~V~~~~~~~~~~ 51 (470)
+||.+|++.|.-+-+ .-.-.|++-|+.||++||.+=.+.+..
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 479999999776555 556789999999999999996665543
No 230
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=25.80 E-value=26 Score=32.40 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=24.0
Q ss_pred hccccccccceeccCchhhhhhhhc----CCcEeeccc
Q 041902 353 VLSHEAVGCFVTHCGWNSSLESLVC----GVPVVAFPQ 386 (470)
Q Consensus 353 vl~~~~v~~~ItHGG~gt~~eal~~----GvP~v~~P~ 386 (470)
....+++ +|+-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999865 889988874
No 231
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=25.77 E-value=28 Score=30.10 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
|||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 67777654 433 236889999999999999754
No 232
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=25.73 E-value=77 Score=28.51 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=32.1
Q ss_pred CCCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 8 QHQPHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.+++++++++. |+-|-..=...||..|+..|.+|.++-.+
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34566666654 78899999999999999999999998544
No 233
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=25.71 E-value=88 Score=25.45 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=29.2
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPAL-QLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l-~la~~L~~~Gh~V~~~~~~ 47 (470)
|+|+++-+..+|+..-+. .|++.|.+.|++|.++--.
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 788888888899998776 4688899999999887543
No 234
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=25.61 E-value=40 Score=26.68 Aligned_cols=48 Identities=19% Similarity=0.206 Sum_probs=32.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc-chhhhcCCCCCCCCceEEE
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF-AYRRMANSPTPEDGLSFAS 67 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~-~~~~v~~~~~~~~g~~~~~ 67 (470)
+.||+++-+|..| ..+|+.|.++||+|+++.... ..+.+ .. .|+.++.
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~~~~~~-~~----~g~~~i~ 55 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRTRVDEL-RE----RGVRAVL 55 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHHHHHHH-HH----TTCEEEE
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHHHHHHH-HH----cCCCEEE
Confidence 4588888665544 367899999999999997653 33444 44 5666543
No 235
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=25.59 E-value=92 Score=24.63 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=28.8
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQGHINPAL-QLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l-~la~~L~~~Gh~V~~~~~~~ 48 (470)
|||+++-+..+|+..-+. .|++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 577777777789886655 46788888999999886544
No 236
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=25.45 E-value=1.9e+02 Score=22.39 Aligned_cols=53 Identities=9% Similarity=-0.038 Sum_probs=34.4
Q ss_pred hcCCcEeeccccchhhHHHHHHHhhhc-ceeEeeecCCCCcCHHHHHHHHHHHhcCCHHHH
Q 041902 376 VCGVPVVAFPQWTDQGTNAKIIVDFCK-TGVRVKANEEGILESDEIKRCLELVMGEGDEFR 435 (470)
Q Consensus 376 ~~GvP~v~~P~~~DQ~~nA~rl~~~~G-vG~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~r 435 (470)
...+|++++--..|...... ..+ .| +--.+. ..++.++|.++|++++. ...+.
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~-~~~-~g~~~~~l~----KP~~~~~L~~~i~~~l~-~~~~~ 127 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAME-AVN-EGQVFRFLN----KPCQMSDIKAAINAGIK-QYDLV 127 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHH-HHH-HTCCSEEEE----SSCCHHHHHHHHHHHHH-HHHHH
T ss_pred CCCcEEEEEECCCCHHHHHH-HHH-cCCeeEEEc----CCCCHHHHHHHHHHHHH-HHHHH
Confidence 34677777755555444444 343 57 544454 36899999999999998 55443
No 237
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.45 E-value=50 Score=29.69 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
|||.|+=.|..|. .+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 6788876655553 6788899999999998543
No 238
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=25.43 E-value=76 Score=28.65 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=29.7
Q ss_pred CEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
++++.+.. |+-|-..=...||..|+++|++|.++=.+
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 45555543 78899999999999999999999998443
No 239
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=25.40 E-value=99 Score=24.29 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 041902 10 QPHFLLVTFPAQGHIN--------PALQLARRLIRIGTRVT 42 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~--------P~l~la~~L~~~Gh~V~ 42 (470)
-|+.++++.|-.|.-. -+-..|..|.++||-+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 3677899999998732 34456777889999654
No 240
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.29 E-value=1.4e+02 Score=24.85 Aligned_cols=83 Identities=12% Similarity=0.070 Sum_probs=47.5
Q ss_pred eEEEEecccc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccc
Q 041902 281 VIYVAFGTIC---VLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHE 357 (470)
Q Consensus 281 vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~ 357 (470)
+-.++.|+.. ......-..+...|...|..+.....-. +.. +.+...+. ..+..+
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~-Dd~-----~~I~~~l~----------------~a~~~~ 63 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVM-DDL-----DEIGWAFR----------------VALEVS 63 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEEC-SCH-----HHHHHHHH----------------HHHHHC
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeC-CCH-----HHHHHHHH----------------HHHhcC
Confidence 5667778753 2222345557777888888776543322 111 12222221 123346
Q ss_pred ccccceeccCchh-----hhhhhh--cCCcEeecccc
Q 041902 358 AVGCFVTHCGWNS-----SLESLV--CGVPVVAFPQW 387 (470)
Q Consensus 358 ~v~~~ItHGG~gt-----~~eal~--~GvP~v~~P~~ 387 (470)
++ +||-||.|- |.||+. .|++++..|-.
T Consensus 64 Dl--VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e~ 98 (172)
T 3kbq_A 64 DL--VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDEDA 98 (172)
T ss_dssp SE--EEEESCCSSSTTCCHHHHHHHHHTCCCEECHHH
T ss_pred CE--EEEcCCCcCCcccchHHHHHHHcCCCeeeCHHH
Confidence 77 999999993 556664 68888776643
No 241
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=25.26 E-value=82 Score=24.16 Aligned_cols=65 Identities=9% Similarity=0.050 Sum_probs=45.8
Q ss_pred ccccccccceeccCchh---------hhhhhhcCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHH
Q 041902 354 LSHEAVGCFVTHCGWNS---------SLESLVCGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCL 424 (470)
Q Consensus 354 l~~~~v~~~ItHGG~gt---------~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i 424 (470)
++.+++ +|--.|..| +..|...|+|++.+=.++.+. .-..+++ .|..+- .++.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~---~a~~iV-----~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA---VSSEVV-----GWNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH---HCSEEE-----CSCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh---hCceec-----cCCHHHHHHHH
Confidence 456888 999999998 567889999999887666542 1111343 233332 48999999999
Q ss_pred HHHhc
Q 041902 425 ELVMG 429 (470)
Q Consensus 425 ~~vl~ 429 (470)
+..+.
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88764
No 242
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=25.24 E-value=30 Score=31.63 Aligned_cols=30 Identities=13% Similarity=0.144 Sum_probs=24.4
Q ss_pred cccccccceeccCchhhhhhhhc----CCcEeeccc
Q 041902 355 SHEAVGCFVTHCGWNSSLESLVC----GVPVVAFPQ 386 (470)
Q Consensus 355 ~~~~v~~~ItHGG~gt~~eal~~----GvP~v~~P~ 386 (470)
..+++ +|+=||-||+.+++.. ++|.+.++.
T Consensus 62 ~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34566 9999999999999743 789888873
No 243
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=25.22 E-value=41 Score=30.78 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
.+|||.|+=.|..|. .+|+.|+++||+|++...
T Consensus 14 ~~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 14 EQLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp -CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 367999997776664 678889999999998854
No 244
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=25.12 E-value=56 Score=27.21 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=28.8
Q ss_pred CEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQ--G-HINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~--G-H~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.+|+++|.=+. . =-.+.-.|++.|.++|.+|.|+.+|-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 47777765222 1 23688899999999999999998874
No 245
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=25.11 E-value=78 Score=29.39 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=33.0
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 041902 10 QPHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATTIFA 49 (470)
Q Consensus 10 ~~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~ 49 (470)
..+|+|++. |+-|-..=...||..|+++|++|.++..+..
T Consensus 18 ~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 18 SLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp TCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 356666665 7889999999999999999999999976543
No 246
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=24.91 E-value=71 Score=28.94 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+|+|+++ |+.|.+-. .++++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIGK--RIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTTHH--HHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHHHH--HHHHHHHhCCCcEEEEECC
Confidence 4565544 55666643 5678899999999998764
No 247
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=24.90 E-value=70 Score=28.36 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=29.5
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 9 HQPHFLLVTF--PAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 9 ~~~~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
++++++.+.. |+-|-..=.+.||..|+ +|++|.++=.
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~ 63 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDM 63 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEE
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEEC
Confidence 4567766644 77788999999999999 9999999943
No 248
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=24.83 E-value=2.9e+02 Score=22.76 Aligned_cols=147 Identities=10% Similarity=0.068 Sum_probs=77.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccccc
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAV 359 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v 359 (470)
|.|-|-+||.. +....+++...|+..|..+-+.+-.- . ..|+.+.+. +.... -...+|
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-H--------Rtp~~l~~~----------~~~~~-~~g~~V 63 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA-H--------RTPDKMFDY----------AETAK-ERGLKV 63 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-T--------TCHHHHHHH----------HHHTT-TTTCCE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC-c--------CCHHHHHHH----------HHHHH-hCCCcE
Confidence 45667788876 56678889999999998776554433 2 445444321 11100 012345
Q ss_pred ccceeccCchhhhhhh---hcCCcEeeccccch-hhHHHHHH--Hh-hhcceeEe-eecCCCCcCHHHHHHHHHHHhcCC
Q 041902 360 GCFVTHCGWNSSLESL---VCGVPVVAFPQWTD-QGTNAKII--VD-FCKTGVRV-KANEEGILESDEIKRCLELVMGEG 431 (470)
Q Consensus 360 ~~~ItHGG~gt~~eal---~~GvP~v~~P~~~D-Q~~nA~rl--~~-~~GvG~~l-~~~~~~~~~~~~l~~~i~~vl~~~ 431 (470)
+|.=+|...-+-.+ .--+|++.+|...- -......+ .+ =.|+++.. ..++.+.++...+...|.. +. |
T Consensus 64 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~-d 139 (166)
T 3oow_A 64 --IIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQ-HT-D 139 (166)
T ss_dssp --EEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHG-GG-C
T ss_pred --EEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-CC-C
Confidence 77766654333322 23589999997432 11111111 11 02444332 1100012233333333332 45 7
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 041902 432 DEFRGNSLKWKDLAREAAKQG 452 (470)
Q Consensus 432 ~~~r~~a~~~~~~~~~~~~~~ 452 (470)
+.++++.+.++++.++.+...
T Consensus 140 ~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 140 INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999988765443
No 249
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.78 E-value=73 Score=29.20 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=23.9
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
.++.|+||+. |+.|.+- ..|+++|.++||+|+.+...
T Consensus 11 ~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVT--GITGQDG--AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ----CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cccCCeEEEE--CCCChHH--HHHHHHHHHCCCeEEEEeCC
Confidence 4445676543 5666554 35788899999999998754
No 250
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=24.76 E-value=43 Score=32.07 Aligned_cols=43 Identities=9% Similarity=-0.095 Sum_probs=30.1
Q ss_pred cccCCCCEEEEEcCCCccCHHHHH----HHHHHHHhCCCeEEEEeCc
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPAL----QLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l----~la~~L~~~Gh~V~~~~~~ 47 (470)
|..|.+|||.++..|..+--.-.+ .++++|.+.||+|+.+...
T Consensus 17 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 17 QGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp ----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 445578899988887666444333 7888999999999998644
No 251
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=24.66 E-value=61 Score=29.39 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=27.7
Q ss_pred CEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGH---INPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH---~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
|||+|+..+.... ..-...++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6999999875321 123457999999999999998764
No 252
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=24.31 E-value=4.1e+02 Score=24.27 Aligned_cols=109 Identities=13% Similarity=0.082 Sum_probs=58.2
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccccc
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDS-GHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEA 358 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~ 358 (470)
.+.+|.+|.++. ..+.++... +..++.+.... . ..-..+.+..+ + .-+-...+++..++
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~-~--------~~~~~~a~~~g--~--~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPF-I--------EGAQRLAEANG--A--EAVASPDEVFARDD 65 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS-H--------HHHHHHHHTTT--C--EEESSHHHHTTCSC
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC-H--------HHHHHHHHHcC--C--ceeCCHHHHhcCCC
Confidence 478888888763 234455554 44555444433 1 11122222222 2 23446677887555
Q ss_pred cccceeccCch----hhhhhhhcCCcEee-ccccc--hh-hHHHHHHHhhhcceeEeee
Q 041902 359 VGCFVTHCGWN----SSLESLVCGVPVVA-FPQWT--DQ-GTNAKIIVDFCKTGVRVKA 409 (470)
Q Consensus 359 v~~~ItHGG~g----t~~eal~~GvP~v~-~P~~~--DQ-~~nA~rl~~~~GvG~~l~~ 409 (470)
++++|----.. .+.+|+.+|+++++ -|+.. ++ ......+++ .|+-+.+..
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~~ 123 (344)
T 3euw_A 66 IDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD-GASKVMLGF 123 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG-GGGGEEECC
T ss_pred CCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh-cCCeEEecc
Confidence 54476544444 47788999999887 35443 33 333444454 676666653
No 253
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=24.28 E-value=70 Score=28.07 Aligned_cols=38 Identities=5% Similarity=-0.031 Sum_probs=27.0
Q ss_pred HHHHHHhhhhcCCCCccEEEeCCCch-------hHHHHHHHcCCCeEEE
Q 041902 98 LTEIITGSENQGAQPFTCLVYSLLLP-------WTAEVARAYHLPSALL 139 (470)
Q Consensus 98 ~~~~~~~l~~~~~~~pDlvv~d~~~~-------~~~~~A~~~giP~i~~ 139 (470)
+.++++.+. .+||+|++|..-. .|.++.-.+++|+|-+
T Consensus 93 ~l~al~~L~----~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 93 FLKAWEKLR----TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHTTCC----SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHhcC----CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 335555554 4699999996543 3566777899999986
No 254
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=24.21 E-value=84 Score=27.53 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=28.9
Q ss_pred EEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 12 HFLLVTF--PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 12 ~il~~~~--~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+++.+.. |+-|-..=.+.||..|+++|++|.++=.+
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 5544433 77789999999999999999999998443
No 255
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=24.13 E-value=53 Score=30.58 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc-cchhhh
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI-FAYRRM 53 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~-~~~~~v 53 (470)
+|||.|+=.|..| ..+|..|.+.||+|++.... ...+.+
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~~~~~~~l 53 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARRKEIVDLI 53 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 5799999777777 46788999999999998653 333444
No 256
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=24.08 E-value=80 Score=28.99 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=22.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
.|+||+ +|+.|.+-- .|+++|.++||+|+..+.
T Consensus 9 ~~~vlV--TGatGfIG~--~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACV--VGGTGFVAS--LLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEE--ECTTSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred CCEEEE--ECCchHHHH--HHHHHHHHCCCEEEEEEc
Confidence 456543 355665543 578889999999987654
No 257
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=23.93 E-value=1e+02 Score=25.77 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQ-LARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~-la~~L~~~Gh~V~~~~~~ 47 (470)
.|||+++.+...|+..-+.. +++.|.+.|++|.++--.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 36898888877888776664 577777789999888543
No 258
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=23.84 E-value=46 Score=31.50 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+|||.|+=.|..|. .+|..|++.||+|++....
T Consensus 29 ~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 58999998887774 5888999999999999764
No 259
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=23.81 E-value=89 Score=27.59 Aligned_cols=40 Identities=10% Similarity=0.017 Sum_probs=28.6
Q ss_pred HHHHHHHHhhhhcCCCCccEEEeCCCch-------hHHHHHHHcCCCeEEE
Q 041902 96 EALTEIITGSENQGAQPFTCLVYSLLLP-------WTAEVARAYHLPSALL 139 (470)
Q Consensus 96 ~~~~~~~~~l~~~~~~~pDlvv~d~~~~-------~~~~~A~~~giP~i~~ 139 (470)
+.+.++++.+. .+||+|++|..-. .|..+.-.+++|+|-+
T Consensus 95 P~ll~al~~L~----~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDALP----CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTSS----SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcC----CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 34445556664 4699999996432 4677788899999986
No 260
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=23.80 E-value=86 Score=28.77 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCc
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRI-G-TRVTFATTI 47 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~-G-h~V~~~~~~ 47 (470)
+.+|+|+++..+.. +.+++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 45689999866654 4789999986 7 888887543
No 261
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=23.73 E-value=1e+02 Score=27.39 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=27.7
Q ss_pred ccCCCCEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEe
Q 041902 6 HRQHQPHFLLVTFPAQ--GHINPALQ-LARRLIRIGTRVTFAT 45 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~--GH~~P~l~-la~~L~~~Gh~V~~~~ 45 (470)
..+.+|||+++....+ |...-++. +++.+.+.|++|.++-
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~id 72 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFD 72 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEE
Confidence 3445689999888665 55555554 5666777899998873
No 262
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=23.70 E-value=1.3e+02 Score=22.26 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=34.1
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhc
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMG 429 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~ 429 (470)
..+|++++ ..+......+..+ .|+--.+.+ .++.++|.+.+++++.
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~k----p~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAK----PVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEES----SCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeC----CCCHHHHHHHHHHHHc
Confidence 57899998 4444555555665 787666663 6899999999999886
No 263
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=23.62 E-value=1.4e+02 Score=26.21 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=28.1
Q ss_pred CEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 11 PHFLLVTFPAQ----------G-HINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 11 ~~il~~~~~~~----------G-H~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
+||||+..... | ...=+......|.+.|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 48888876532 2 34567777888999999999998653
No 264
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=23.42 E-value=29 Score=31.91 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeCccchhhh
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRI-----G-TRVTFATTIFAYRRM 53 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~-----G-h~V~~~~~~~~~~~v 53 (470)
+|||.|+-.|..|. .+|..|.+. | |+|+++..+...+.+
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l 52 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAI 52 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHH
Confidence 47999997777663 567888888 9 999999764434444
No 265
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.25 E-value=4.2e+02 Score=23.96 Aligned_cols=107 Identities=9% Similarity=-0.032 Sum_probs=59.4
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc---chhhhcCCCCCCCCceEEEcCCCCCCCCCCCC
Q 041902 6 HRQHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIF---AYRRMANSPTPEDGLSFASFSDGYDDGFNSKQ 80 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~---~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~ 80 (470)
...+++||+++..+. || -+-+|..+...- ..+|..+.+.. ..+.. +. .|+.++.+|....
T Consensus 84 ~~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A-~~----~gIp~~~~~~~~~------- 148 (287)
T 3nrb_A 84 PRTDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVS-LV----GDIPFHYLPVTPA------- 148 (287)
T ss_dssp ETTCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCC-CC----TTSCEEECCCCGG-------
T ss_pred ccCCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHH-HH----cCCCEEEEeccCc-------
Confidence 345678998777665 44 333555444443 36777765432 22333 55 7899988874310
Q ss_pred CCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 81 NDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. ...... ++++.+++ .+||+||.-.+. .....+-+.+.-.++-++++
T Consensus 149 ---~------r~~~~~---~~~~~l~~---~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 149 ---T------KAAQES---QIKNIVTQ---SQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ---G------HHHHHH---HHHHHHHH---HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ---c------hhhHHH---HHHHHHHH---hCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 0 011122 23333333 359999987554 44555666666677777554
No 266
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=23.21 E-value=62 Score=27.76 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=24.2
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
.-..|+|.|+-.|..| ..+|..|.++||+|++...
T Consensus 16 ~~~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 16 YFQGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 3456899888665555 4578889999999998743
No 267
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=22.94 E-value=1.6e+02 Score=23.76 Aligned_cols=39 Identities=8% Similarity=0.058 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPAL-QLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l-~la~~L~~~Gh~V~~~~~~ 47 (470)
.+.+|+++-+..+|+..-+. .|++.|.+.|++|.++--.
T Consensus 3 ~~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 45688888888899998877 5688899999999887544
No 268
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=22.66 E-value=1.3e+02 Score=22.85 Aligned_cols=37 Identities=8% Similarity=-0.031 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 041902 9 HQPHFLLVTFPAQGHINP-ALQLARRLIRIGTRVTFAT 45 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P-~l~la~~L~~~Gh~V~~~~ 45 (470)
+++||+++|..+.|.-.= .-.|-+.+.+.|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 446899999999999874 5677788888999865443
No 269
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.60 E-value=96 Score=26.68 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=28.8
Q ss_pred EEE-EEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 12 HFL-LVTF-PAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 12 ~il-~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+++ |.+. |+-|-..=.+.||..|+++|++|.++=.+
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 444 4433 77789999999999999999999999543
No 270
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=22.49 E-value=65 Score=33.26 Aligned_cols=95 Identities=9% Similarity=-0.037 Sum_probs=52.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc-----------hhhhcCCCCCCCCceEEEcCCCCCCCCCCC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA-----------YRRMANSPTPEDGLSFASFSDGYDDGFNSK 79 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~-----------~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~ 79 (470)
|||+|+..|..| ....++|.++||+|..+.+... .+.. +. .|+.++.....
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a-~~----~~ip~~~~~~~-------- 62 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLA-AE----RGIPVYAPDNV-------- 62 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHH-HH----HTCCEECCSCT--------
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHH-HH----cCCCEeccCCC--------
Confidence 788888765433 2225667778999988876432 1222 33 45555432211
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEechh
Q 041902 80 QNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQP 143 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~~ 143 (470)
+. . ++++.+++ .+||+||+-.+. .....+-......++-++++.
T Consensus 63 -~~-~---------------~~~~~l~~---~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 63 -NH-P---------------LWVERIAQ---LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp -TS-H---------------HHHHHHHH---HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred -Cc-H---------------HHHHHHHh---cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 00 1 12233333 359999886543 344555566666788887763
No 271
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=22.35 E-value=42 Score=32.10 Aligned_cols=42 Identities=14% Similarity=0.251 Sum_probs=25.5
Q ss_pred CccccccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 1 MEQEQHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
|+-.|+.+++ ||+++=.+.-| +..|..|...|++|+++....
T Consensus 1 ~~~~~~~~~~-~~vIvGgG~AG-----l~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 1 MHHHHHHKST-KILILGAGPAG-----FSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp -------CBC-SEEEECCSHHH-----HHHHHHHTTTCSCEEEECSSS
T ss_pred CCCccccCCC-CEEEEcCcHHH-----HHHHHHHhCCCCEEEEEECCC
Confidence 6666666655 77777665444 567788878899999996654
No 272
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=22.23 E-value=96 Score=28.41 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
..|+||+. |+.|.+- ..|+++|.++||+|+.+..
T Consensus 19 ~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 34666553 5556554 3578889999999999875
No 273
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=22.15 E-value=1.3e+02 Score=26.98 Aligned_cols=39 Identities=5% Similarity=-0.147 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCcc-CHH---HHHHHHHHHHhCCCeEEEEeCcc
Q 041902 10 QPHFLLVTFPAQG-HIN---PALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 10 ~~~il~~~~~~~G-H~~---P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
+|||+++..+... |-. -...++++|.++||+|.++...+
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 4789888764432 222 33578999999999999987653
No 274
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=22.11 E-value=2.5e+02 Score=25.92 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=58.6
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHHhC--CCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhccc
Q 041902 279 SSVIYVAFGTICVLEKRQVEEIARGLLDS--GHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSH 356 (470)
Q Consensus 279 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~ 356 (470)
-.+.+|.+|.++. ..+.++... +.+++.+.... . ..-..+.+... + ..+-...+++..
T Consensus 14 ~rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~-~--------~~~~~~~~~~~--~--~~~~~~~~ll~~ 73 (354)
T 3q2i_A 14 IRFALVGCGRIAN-------NHFGALEKHADRAELIDVCDID-P--------AALKAAVERTG--A--RGHASLTDMLAQ 73 (354)
T ss_dssp EEEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSS-H--------HHHHHHHHHHC--C--EEESCHHHHHHH
T ss_pred ceEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCC-H--------HHHHHHHHHcC--C--ceeCCHHHHhcC
Confidence 3588999998773 234555554 45555554433 1 11122222222 2 234566778875
Q ss_pred cccccceeccCc----hhhhhhhhcCCcEee-ccccc--hhh-HHHHHHHhhhcceeEeee
Q 041902 357 EAVGCFVTHCGW----NSSLESLVCGVPVVA-FPQWT--DQG-TNAKIIVDFCKTGVRVKA 409 (470)
Q Consensus 357 ~~v~~~ItHGG~----gt~~eal~~GvP~v~-~P~~~--DQ~-~nA~rl~~~~GvG~~l~~ 409 (470)
+++++++----. ..+.+|+.+|+++++ -|+.. ++- ...+..++ .|+-+.+..
T Consensus 74 ~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~-~g~~~~v~~ 133 (354)
T 3q2i_A 74 TDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK-AKKHLFVVK 133 (354)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECC
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH-hCCeEEEEE
Confidence 444446643332 346778999999887 36543 333 33344444 676666553
No 275
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=22.00 E-value=46 Score=30.01 Aligned_cols=58 Identities=7% Similarity=-0.119 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCcc----chhhhcCCCCCCCCceEEEcCC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARR--------LIRI-GTRVTFATTIF----AYRRMANSPTPEDGLSFASFSD 70 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~--------L~~~-Gh~V~~~~~~~----~~~~v~~~~~~~~g~~~~~i~~ 70 (470)
.++.+|++.+.++..|-....-++.- |.++ |++|...+..- ..+.+ .. .+.+.+-+..
T Consensus 118 ~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa-~e----~~~d~VglS~ 188 (262)
T 1xrs_B 118 GRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKA-VE----LEADVLLVSQ 188 (262)
T ss_dssp CSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHH-HH----TTCSEEEEEC
T ss_pred CCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHH-HH----cCCCEEEEEe
Confidence 35679999999999999999988877 9999 99999987643 33333 33 4555665543
No 276
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=21.99 E-value=96 Score=28.44 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=24.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 8 QHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 8 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
+.+|+||+ +|+.|.+- ..|+++|.++||+|+.+..
T Consensus 3 ~~~~~vlV--TGatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 3 STKGTILV--TGGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CSSCEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCcEEEE--ecCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 34566654 34555554 3678899999999998854
No 277
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=21.92 E-value=77 Score=30.06 Aligned_cols=38 Identities=8% Similarity=-0.005 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeC
Q 041902 9 HQPHFLLVTFPAQG-H---INPALQLARRL-IRIGTRVTFATT 46 (470)
Q Consensus 9 ~~~~il~~~~~~~G-H---~~P~l~la~~L-~~~Gh~V~~~~~ 46 (470)
.+|||+++..+-.+ | +.-...++++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 36899988776555 3 23457888999 999999999853
No 278
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=21.92 E-value=3.2e+02 Score=22.81 Aligned_cols=111 Identities=11% Similarity=0.107 Sum_probs=63.9
Q ss_pred eEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhh-hHHHHHHhCCCeEEeec----cChhhhcc
Q 041902 281 VIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDV-VMKYKEELNEKGMIVPW----CSQVEVLS 355 (470)
Q Consensus 281 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~nv~v~~~----vp~~~vl~ 355 (470)
+++.-.||+... ....+++.|.+.|.++-++.+.. ... .+ +..+ +.+.++ ..-.| +.+-.+-.
T Consensus 5 IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~-A~~------fi~~~~l-~~l~~~-~~d~~~~~~~~hi~l~~ 72 (181)
T 1g63_A 5 LLICATASINVI---NINHYIVELKQHFDEVNILFSPS-SKN------FINTDVL-KLFCDN-LYDEIKDPLLNHINIVE 72 (181)
T ss_dssp EEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGG-GGG------TSCGGGG-GGTSSC-EECTTTCTTCCHHHHHH
T ss_pred EEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchh-HHH------HHHHHHH-HHHhCC-cccccCCCCCccccccc
Confidence 566666776643 23456667777788887777765 322 22 2222 234455 22222 33554455
Q ss_pred ccccccceeccCchhh-------------hhhhhcCCcEeecccc----ch---hhHHHHHHHhhhccee
Q 041902 356 HEAVGCFVTHCGWNSS-------------LESLVCGVPVVAFPQW----TD---QGTNAKIIVDFCKTGV 405 (470)
Q Consensus 356 ~~~v~~~ItHGG~gt~-------------~eal~~GvP~v~~P~~----~D---Q~~nA~rl~~~~GvG~ 405 (470)
.+|+ .+|--+=.||+ .-++..++|.++.|-. .. ...|..++.+ .|+-+
T Consensus 73 ~aD~-~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~-~G~~i 140 (181)
T 1g63_A 73 NHEY-ILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKN-NDVKV 140 (181)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHT-TTCEE
T ss_pred cCCE-EEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHH-CCCEE
Confidence 5554 36666666654 3347789999999932 12 2457777887 77633
No 279
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=21.91 E-value=72 Score=29.61 Aligned_cols=31 Identities=10% Similarity=0.070 Sum_probs=21.0
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCCeEEEec
Q 041902 111 QPFTCLVYSLLLPWTAEVARAYHLPSALLWI 141 (470)
Q Consensus 111 ~~pDlvv~d~~~~~~~~~A~~~giP~i~~~~ 141 (470)
.+||+||..........--++.|||++.+..
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 4699999975433333444568999998743
No 280
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.84 E-value=97 Score=26.70 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
||.++++.++.| + =..+|++|.++|++|.+....
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 567777766543 2 247899999999999888654
No 281
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=21.68 E-value=3.3e+02 Score=22.22 Aligned_cols=134 Identities=13% Similarity=0.174 Sum_probs=70.6
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccccccc
Q 041902 282 IYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHEAVGC 361 (470)
Q Consensus 282 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~~v~~ 361 (470)
|-|=+||.. +....++....|+..|.++-+-+-.- + ..|+.+.+... .. ..++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa-H--------R~p~~~~~~~~----------~a----~~~V-- 54 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA-H--------RTPELVEEIVK----------NS----KADV-- 54 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-T--------TCHHHHHHHHH----------HC----CCSE--
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-c--------CCHHHHHHHHH----------hc----CCCE--
Confidence 345567766 55678889999999998876555433 2 44554432111 00 0133
Q ss_pred ceeccCch----hhhhhhhcCCcEeeccccchhhHHHHHHHhhh----cceeE-eeecCCCCcCHHHHHHHHHHHhcCCH
Q 041902 362 FVTHCGWN----SSLESLVCGVPVVAFPQWTDQGTNAKIIVDFC----KTGVR-VKANEEGILESDEIKRCLELVMGEGD 432 (470)
Q Consensus 362 ~ItHGG~g----t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~----GvG~~-l~~~~~~~~~~~~l~~~i~~vl~~~~ 432 (470)
+|.=+|.. ++..++ --+|++.+|...--......+.- . |+.+. +.. ++.++...+...|. -+. |+
T Consensus 55 iIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~-vqmP~gvpVatV~I--~~~~nAa~lA~~Il-~~~-d~ 128 (157)
T 2ywx_A 55 FIAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSS-VQMPPGIPVATVGI--DRGENAAILALEIL-ALK-DE 128 (157)
T ss_dssp EEEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHH-HSCCTTSCCEECCT--TCHHHHHHHHHHHH-TTT-CH
T ss_pred EEEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHH-hcCCCCCeeEEEec--CCcHHHHHHHHHHH-hcC-CH
Confidence 55554443 333333 35788888873222222222221 2 33221 111 12344444444443 345 78
Q ss_pred HHHHHHHHHHHHHHHH
Q 041902 433 EFRGNSLKWKDLAREA 448 (470)
Q Consensus 433 ~~r~~a~~~~~~~~~~ 448 (470)
+.+++.++++++..+.
T Consensus 129 ~l~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 129 NIAKKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999998887764
No 282
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=21.67 E-value=51 Score=31.22 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=25.4
Q ss_pred cccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 5 QHRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+-|++.|+|.|+=.|..| ..+|..|.++||+|++....
T Consensus 17 ~~Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -----CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hhhhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 345566899998655544 36788899999999988543
No 283
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=21.65 E-value=1.8e+02 Score=28.10 Aligned_cols=25 Identities=8% Similarity=0.056 Sum_probs=19.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGT 39 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh 39 (470)
.||||++-.+++ -.+||++|++.+.
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 489999977754 4478999999875
No 284
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=21.55 E-value=1.3e+02 Score=25.37 Aligned_cols=36 Identities=19% Similarity=0.129 Sum_probs=29.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
..++++..+..|+-.-...+++.|.++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 356777778888888889999999999999887743
No 285
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=21.49 E-value=1e+02 Score=31.31 Aligned_cols=40 Identities=28% Similarity=0.277 Sum_probs=33.4
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 9 HQPHFLLVTF-PAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 9 ~~~~il~~~~-~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
+.++|+|++. |+-|-..=...||..|+++|++|.++..+.
T Consensus 6 ~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3456666666 788999999999999999999999998764
No 286
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=21.49 E-value=46 Score=31.38 Aligned_cols=31 Identities=19% Similarity=0.022 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 12 HFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 12 ~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
||.|+=.|..|. .+|..|.++||+|+++...
T Consensus 17 kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 898887776663 5788899999999998654
No 287
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=21.48 E-value=83 Score=29.66 Aligned_cols=40 Identities=10% Similarity=0.110 Sum_probs=33.6
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCcc
Q 041902 9 HQPHFLLVTF-PAQGHINPALQLARRLI--RIGTRVTFATTIF 48 (470)
Q Consensus 9 ~~~~il~~~~-~~~GH~~P~l~la~~L~--~~Gh~V~~~~~~~ 48 (470)
+.++|+|++. |+-|-.+=..+||..|+ ++|++|.++..+.
T Consensus 16 ~~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 16 TTHKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp SSCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3456777665 88899999999999999 9999999997664
No 288
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=21.40 E-value=3.9e+02 Score=22.88 Aligned_cols=102 Identities=9% Similarity=0.047 Sum_probs=58.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCcc----chhhhcCCCCCCCCceEEEcCC-CCCCCCCCCCCCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTIF----AYRRMANSPTPEDGLSFASFSD-GYDDGFNSKQNDP 83 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~~----~~~~v~~~~~~~~g~~~~~i~~-~~~~~~~~~~~~~ 83 (470)
|||+++..+..+. +-+|.+++.+. +|+|..+.+.. ..+.. +. .|+.++.++. .+..
T Consensus 1 ~ri~vl~Sg~gsn---l~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A-~~----~gIp~~~~~~~~~~~--------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGSN---LQAIIDACKTNKIKGTVRAVFSNKADAFGLERA-RQ----AGIATHTLIASAFDS--------- 63 (212)
T ss_dssp CEEEEEESSCCHH---HHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH-HH----TTCEEEECCGGGCSS---------
T ss_pred CEEEEEEECCcHH---HHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH-HH----cCCcEEEeCcccccc---------
Confidence 5777776665542 55566666665 68887775442 22334 55 7888887642 2110
Q ss_pred hhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 84 RRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
. .... .++++.+++ .+||+||+-.+. .....+-..+...++-++++
T Consensus 64 r-------~~~~---~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 R-------EAYD---RELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp H-------HHHH---HHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred h-------hhcc---HHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 1 1111 233444444 469999987653 34455556666777877654
No 289
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=21.33 E-value=1.2e+02 Score=27.71 Aligned_cols=35 Identities=9% Similarity=0.076 Sum_probs=26.7
Q ss_pred ccCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 041902 6 HRQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFAT 45 (470)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~ 45 (470)
.|+.+|+|+++... .......+.|.+.||+|.+..
T Consensus 3 ~~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 3 AMLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 35678999888542 356677899999999998764
No 290
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=21.02 E-value=43 Score=26.52 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=26.9
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCccchhhh
Q 041902 22 GHINPALQLARRLIRIGTRVTFATTIFAYRRM 53 (470)
Q Consensus 22 GH~~P~l~la~~L~~~Gh~V~~~~~~~~~~~v 53 (470)
||++.+-.|-+.|.++|.+..+++.+.+...+
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~Yl 32 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYL 32 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHH
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceee
Confidence 78888889999999999999999999888887
No 291
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=21.01 E-value=77 Score=29.07 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=26.2
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
....|||.|+=.|..| ..+|..|++.||+|++...
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 3445799998655555 4678889999999998854
No 292
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=20.99 E-value=1.2e+02 Score=28.34 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=49.9
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEE-ecCCCCCCCCCchhhhHHHHHHhCCCeEEe
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVI-REHENKDKDKGEDDVVMKYKEELNEKGMIV 345 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~ 345 (470)
+.+.+++...+.++++.|+-.+... ...+.+...|+..+..+.+.. ..+ + .+ +.+. +. +.
T Consensus 23 ~~l~~~l~~~g~~~~livtd~~~~~---~~~~~v~~~L~~~g~~~~~~~~~~~-~--------~~-~~v~-~~-~~---- 83 (354)
T 3ce9_A 23 YNIGQIIKKGNFKRVSLYFGEGIYE---LFGETIEKSIKSSNIEIEAVETVKN-I--------DF-DEIG-TN-AF---- 83 (354)
T ss_dssp GGHHHHHGGGTCSEEEEEEETTHHH---HHHHHHHHHHHTTTCEEEEEEEECC-C--------BH-HHHH-HH-HT----
T ss_pred HHHHHHHHhcCCCeEEEEECccHHH---HHHHHHHHHHHHcCCeEEEEecCCC-C--------CH-HHHH-HH-HH----
Confidence 3444555443333466665443332 346778888888777665443 222 1 11 1111 11 10
Q ss_pred eccChhhhccccccccceeccCchhhhhh-----hhcCCcEeeccccc
Q 041902 346 PWCSQVEVLSHEAVGCFVTHCGWNSSLES-----LVCGVPVVAFPQWT 388 (470)
Q Consensus 346 ~~vp~~~vl~~~~v~~~ItHGG~gt~~ea-----l~~GvP~v~~P~~~ 388 (470)
+ .=..+++ +|-=|| ||+..+ ...|+|.+.+|...
T Consensus 84 --~----~~~~~d~--IIavGG-Gsv~D~aK~vA~~~~~p~i~IPTT~ 122 (354)
T 3ce9_A 84 --K----IPAEVDA--LIGIGG-GKAIDAVKYMAFLRKLPFISVPTST 122 (354)
T ss_dssp --T----SCTTCCE--EEEEES-HHHHHHHHHHHHHHTCCEEEEESCC
T ss_pred --h----hhcCCCE--EEEECC-hHHHHHHHHHHhhcCCCEEEecCcc
Confidence 0 0024565 888877 555543 45799999999764
No 293
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=20.91 E-value=2.6e+02 Score=20.99 Aligned_cols=48 Identities=6% Similarity=0.032 Sum_probs=34.3
Q ss_pred cCCcEeeccccchhhHHHHHHHhhhcceeEeeecCCCCcCHHHHHHHHHHHhc
Q 041902 377 CGVPVVAFPQWTDQGTNAKIIVDFCKTGVRVKANEEGILESDEIKRCLELVMG 429 (470)
Q Consensus 377 ~GvP~v~~P~~~DQ~~nA~rl~~~~GvG~~l~~~~~~~~~~~~l~~~i~~vl~ 429 (470)
..+|++++--..+.........+ .|+--.+.+ .++.++|.++|++++.
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~k----P~~~~~l~~~i~~~l~ 126 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQP-LAVSTWLEK----PIDENLLILSLHRAID 126 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTT-TCCCEEECS----SCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhh-cCCCEEEeC----CCCHHHHHHHHHHHHH
Confidence 47888888655554443324555 677666764 6899999999999998
No 294
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=20.79 E-value=2.2e+02 Score=20.57 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
+..+|+++|.. | ......+..|...||+|..+.+
T Consensus 55 ~~~~ivvyC~~--g--~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKA--G--GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSS--S--HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCC--C--chHHHHHHHHHHCCCCEEEecc
Confidence 44688888854 3 4567788999999998776643
No 295
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.76 E-value=54 Score=30.14 Aligned_cols=46 Identities=17% Similarity=0.078 Sum_probs=33.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc-chhhhcCCCCCCCCceEE
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF-AYRRMANSPTPEDGLSFA 66 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~-~~~~v~~~~~~~~g~~~~ 66 (470)
+|||+|+-.|+.|- .+|..|. .||+|+++.... ..+.+ .+ .|+...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l-~~----~G~~~~ 48 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAI-QS----EGIRLY 48 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHH-HH----HCEEEE
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHH-Hh----CCceEe
Confidence 38999998887775 5677888 999999998765 34555 44 565554
No 296
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=20.74 E-value=3.4e+02 Score=24.45 Aligned_cols=77 Identities=13% Similarity=-0.005 Sum_probs=50.7
Q ss_pred CeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEe
Q 041902 39 TRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVY 118 (470)
Q Consensus 39 h~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~ 118 (470)
.+..+++++.+.-.. +. .|+..+.+... ..++ ....+.++++.+++ .+..+|++
T Consensus 190 ~~~~v~~H~af~Yf~-~~----yGl~~~~~~~~-------~~ep-----------s~~~l~~l~~~ik~---~~v~~If~ 243 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFA-RD----YNLVQIPIEVE-------GQEP-----------SAQELKQLIDTAKE---NNLTMVFG 243 (291)
T ss_dssp CCEEEESSCCCHHHH-HH----TTCEEEESCBT-------TBCC-----------CHHHHHHHHHHHHT---TTCCEEEE
T ss_pred CCEEEEECCchHHHH-HH----CCCEEeecccC-------CCCC-----------CHHHHHHHHHHHHH---cCCCEEEE
Confidence 344455566666666 66 78887766421 1122 34556667777766 45899999
Q ss_pred CCCch--hHHHHHHHcCCCeEEEec
Q 041902 119 SLLLP--WTAEVARAYHLPSALLWI 141 (470)
Q Consensus 119 d~~~~--~~~~~A~~~giP~i~~~~ 141 (470)
+..+. .+..+|+..|++.+.+.+
T Consensus 244 e~~~~~~~~~~ia~~~g~~v~~ld~ 268 (291)
T 1pq4_A 244 ETQFSTKSSEAIAAEIGAGVELLDP 268 (291)
T ss_dssp ETTSCCHHHHHHHHHHTCEEEEECT
T ss_pred eCCCChHHHHHHHHHcCCeEEEEcC
Confidence 87664 467789999999887543
No 297
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.65 E-value=4.8e+02 Score=23.65 Aligned_cols=106 Identities=10% Similarity=0.047 Sum_probs=60.8
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCc--cchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCC
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRI--GTRVTFATTI--FAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQND 82 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~--Gh~V~~~~~~--~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~ 82 (470)
..+++||+++..+. || -+-+|..+...- ..+|..+.+. +..... +. .|+.++.+|.... .
T Consensus 92 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A-~~----~gIp~~~~~~~~~--------~ 155 (292)
T 3lou_A 92 VAARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLA-AQ----HGLPFRHFPITAD--------T 155 (292)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHH-HH----TTCCEEECCCCSS--------C
T ss_pred cCCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHH-HH----cCCCEEEeCCCcC--------C
Confidence 45678998777655 55 344455444432 3677777543 344444 66 8999998875321 0
Q ss_pred chhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEEeCCCc-hhHHHHHHHcCCCeEEEech
Q 041902 83 PRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLVYSLLL-PWTAEVARAYHLPSALLWIQ 142 (470)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv~d~~~-~~~~~~A~~~giP~i~~~~~ 142 (470)
.. .....+.+.+++ .+||+||.-.+. .....+-..+.-.++-++++
T Consensus 156 -r~-------~~~~~~~~~l~~------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 156 -KA-------QQEAQWLDVFET------SGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp -HH-------HHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -HH-------HHHHHHHHHHHH------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 11 112223333333 359999987554 44556666666677776554
No 298
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.60 E-value=89 Score=28.95 Aligned_cols=33 Identities=21% Similarity=0.144 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+|||+|+-+|..+- ...++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 58999998886653 3357788899999888763
No 299
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=20.48 E-value=63 Score=29.70 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
..|+||+. |+.|.+-. .|++.|.++||+|+.++..
T Consensus 12 ~~M~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLLGH--HAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHHHH--HHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHHHH--HHHHHHHHCCCEEEEEecC
Confidence 34676554 56665543 5678899999999998754
No 300
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=20.41 E-value=4.7e+02 Score=23.45 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=79.1
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHh-------------------
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEEL------------------- 338 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 338 (470)
++.|+.|..|.++ ...+..|...|+++.++.+.. .. .+.+.+.+..
T Consensus 13 ~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~-~~-------~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 77 (274)
T 1kyq_A 13 DKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDL-HK-------SIIPKFGKFIQNKDQPDYREDAKRFINPN 77 (274)
T ss_dssp TCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEE-CT-------THHHHHCGGGC-----------CEEECTT
T ss_pred CCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCC-Cc-------chhHHHHHHHhccccccccchhhcccccc
Confidence 5668999888766 334666778888887766533 11 1111121111
Q ss_pred ----CCCe-EEe-eccChhhhcc------ccccccceeccCchhhhhhh-----hc---CCcEeeccccchhhHHHH---
Q 041902 339 ----NEKG-MIV-PWCSQVEVLS------HEAVGCFVTHCGWNSSLESL-----VC---GVPVVAFPQWTDQGTNAK--- 395 (470)
Q Consensus 339 ----~~nv-~v~-~~vp~~~vl~------~~~v~~~ItHGG~gt~~eal-----~~---GvP~v~~P~~~DQ~~nA~--- 395 (470)
..++ .++ +-.. ...|. .+++ +|.--|...+.+.+ .. |+|+-+ .|.+..+.
T Consensus 78 ~~~~~g~i~~~i~~~~~-~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNv----vd~pel~~f~~ 150 (274)
T 1kyq_A 78 WDPTKNEIYEYIRSDFK-DEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNV----ADKPDLCDFYF 150 (274)
T ss_dssp CCTTSCCCSEEECSSCC-GGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEE----TTCGGGBSEEC
T ss_pred cccccCCeeEEEcCCCC-HHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEE----CCCcccCeeEe
Confidence 1233 332 2112 22343 4555 78777766444333 33 555522 24444443
Q ss_pred --HHHhhhc-ceeEeeecCCCCcCHHHHHHHHHHHh---c-CC-HHHHHHHHHHHHHHHHH
Q 041902 396 --IIVDFCK-TGVRVKANEEGILESDEIKRCLELVM---G-EG-DEFRGNSLKWKDLAREA 448 (470)
Q Consensus 396 --rl~~~~G-vG~~l~~~~~~~~~~~~l~~~i~~vl---~-~~-~~~r~~a~~~~~~~~~~ 448 (470)
.+.+ -+ +-+.+.++.....-...|++.|+..| . .+ ..+.+.+.++++.+++.
T Consensus 151 Pa~~~~-g~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 151 GANLEI-GDRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp CEEEEE-TTTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEe-CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh
Confidence 3333 33 34444453323344578899999998 4 13 25778888888888765
No 301
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=20.39 E-value=1.5e+02 Score=25.88 Aligned_cols=45 Identities=13% Similarity=0.153 Sum_probs=31.3
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLW 313 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 313 (470)
+.+.+|+.. .+.+++|..|+........+..+.++++..|+.++.
T Consensus 22 ~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 22 PLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 567777753 456999998875433345577789999999876443
No 302
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=20.36 E-value=1.3e+02 Score=25.40 Aligned_cols=62 Identities=11% Similarity=0.173 Sum_probs=37.4
Q ss_pred CCEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCccc-----hhhhcCCCCCCCCceEEEcCCC
Q 041902 10 QPHF-LLVTFPAQGHINPALQLARRLIRIGTRVTFATTIFA-----YRRMANSPTPEDGLSFASFSDG 71 (470)
Q Consensus 10 ~~~i-l~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~~-----~~~v~~~~~~~~g~~~~~i~~~ 71 (470)
+.|| +|+..+...+-.....+++.|++.|++|..++.... -+.+.+..-.+.+-+|+.+|++
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHHHHHCSTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhccCCCceEEEEecCc
Confidence 3455 455455555677788999999999999998854321 1111011000046788888754
No 303
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=20.29 E-value=3.7e+02 Score=22.28 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=74.4
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccc
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHE 357 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~ 357 (470)
+.|.|-|=+||.. +....++....|+..|.++-+.+-.. + ..|+.+.+.. -... -...
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-H--------R~p~~l~~~~----------~~a~-~~g~ 68 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA-H--------RMPDEMFDYA----------EKAR-ERGL 68 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-T--------TSHHHHHHHH----------HHHT-TTTC
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc-c--------cCHHHHHHHH----------HHHH-hcCC
Confidence 4566778889877 55678889999999998876555433 2 4454433111 0000 0112
Q ss_pred ccccceeccCch----hhhhhhhcCCcEeeccccchh---hHHHHHHHhhhcceeEeeecCCCCcC------HHHHHHHH
Q 041902 358 AVGCFVTHCGWN----SSLESLVCGVPVVAFPQWTDQ---GTNAKIIVDFCKTGVRVKANEEGILE------SDEIKRCL 424 (470)
Q Consensus 358 ~v~~~ItHGG~g----t~~eal~~GvP~v~~P~~~DQ---~~nA~rl~~~~GvG~~l~~~~~~~~~------~~~l~~~i 424 (470)
++ +|.=.|.- ++..+ .--+|++.+|..... .+--.-+.. +=-|+-+.. -..+ ..-+...|
T Consensus 69 ~V--iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvat---v~i~~~~a~NAallA~~I 141 (173)
T 4grd_A 69 RA--IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVAT---FAIGEAGAANAALFAVSI 141 (173)
T ss_dssp SE--EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEE---CCSSHHHHHHHHHHHHHH
T ss_pred eE--EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceE---EecCCcchHHHHHHHHHH
Confidence 33 55444432 33333 346899999965421 111111222 222322222 1223 22232222
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHH
Q 041902 425 ELVMGEGDEFRGNSLKWKDLAREAA 449 (470)
Q Consensus 425 ~~vl~~~~~~r~~a~~~~~~~~~~~ 449 (470)
- -++ |++++++.++++++..+..
T Consensus 142 L-a~~-d~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 142 L-SGN-SVDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp H-TTS-CHHHHHHHHHHHHHHHHHH
T ss_pred H-cCC-CHHHHHHHHHHHHHHHHHH
Confidence 2 245 8899999999998887653
No 304
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=20.27 E-value=92 Score=29.19 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=24.0
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEe
Q 041902 280 SVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIR 316 (470)
Q Consensus 280 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 316 (470)
.+++++.|+.+ -...+..+..+|...|+++.+..+
T Consensus 6 ~il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 47777777544 223456688888888888887664
No 305
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=20.24 E-value=57 Score=32.50 Aligned_cols=35 Identities=9% Similarity=0.120 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 041902 9 HQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTIF 48 (470)
Q Consensus 9 ~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~~ 48 (470)
.|.||+++=.+.-| +.+|++|.+.|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 35699888666555 578999999999999997654
No 306
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=20.23 E-value=88 Score=23.18 Aligned_cols=48 Identities=25% Similarity=0.206 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCccc-hhhhcCCCCCCCCceEEE
Q 041902 10 QPHFLLVTFPAQGHINPALQLARRLIRIG-TRVTFATTIFA-YRRMANSPTPEDGLSFAS 67 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~la~~L~~~G-h~V~~~~~~~~-~~~v~~~~~~~~g~~~~~ 67 (470)
.|+|+++ |+ |.+- ..+++.|.++| |+|+.+..... .+.+ .. .++.+..
T Consensus 5 ~~~v~I~--G~-G~iG--~~~~~~l~~~g~~~v~~~~r~~~~~~~~-~~----~~~~~~~ 54 (118)
T 3ic5_A 5 RWNICVV--GA-GKIG--QMIAALLKTSSNYSVTVADHDLAALAVL-NR----MGVATKQ 54 (118)
T ss_dssp CEEEEEE--CC-SHHH--HHHHHHHHHCSSEEEEEEESCHHHHHHH-HT----TTCEEEE
T ss_pred cCeEEEE--CC-CHHH--HHHHHHHHhCCCceEEEEeCCHHHHHHH-Hh----CCCcEEE
Confidence 3577766 44 5443 35788899999 99988865432 2333 33 5666544
No 307
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=20.21 E-value=1.1e+02 Score=25.44 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCcc
Q 041902 10 QPHFLLVTFPAQGHINPALQ-LARRLIR-IGTRVTFATTIF 48 (470)
Q Consensus 10 ~~~il~~~~~~~GH~~P~l~-la~~L~~-~Gh~V~~~~~~~ 48 (470)
.|||+++-+...|+..-+.. +++.|.+ .|++|.++--..
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 46898888888888877664 5777777 899998886544
No 308
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.21 E-value=3.5e+02 Score=23.90 Aligned_cols=32 Identities=31% Similarity=0.337 Sum_probs=25.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 041902 12 HFLLVTFPAQGHINPALQLARRLIRIGTRVTFATT 46 (470)
Q Consensus 12 ~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~ 46 (470)
|+.+++.++.| ==.++|++|+++|.+|.+...
T Consensus 10 KvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 10 KTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 78888888776 235789999999999988754
No 309
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=20.11 E-value=3.4e+02 Score=24.82 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=51.6
Q ss_pred CCeEEEEeCccchhhhcCCCCCCCCceEEEcCCCCCCCCCCCCCCchhhHHHHHHHhHHHHHHHHHhhhhcCCCCccEEE
Q 041902 38 GTRVTFATTIFAYRRMANSPTPEDGLSFASFSDGYDDGFNSKQNDPRRYVSEFKRRSSEALTEIITGSENQGAQPFTCLV 117 (470)
Q Consensus 38 Gh~V~~~~~~~~~~~v~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pDlvv 117 (470)
..+..++.++.+.... +. .|++.+.+.. ..+ ..++ ....+.++++.+++ .+..+|+
T Consensus 189 ~~~~~v~~H~af~Yfa-~~----yGl~~~~~~~-~~~----~~ep-----------s~~~l~~l~~~ik~---~~v~~If 244 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLA-KE----YGLKQVPIAG-LSP----DQEP-----------SAASLAKLKTYAKE---HNVKVIY 244 (312)
T ss_dssp SCCEEEESSCTTHHHH-HH----TTCEEEECSS-CCS----SSCC-----------CHHHHHHHHHHTTS---SCCCEEE
T ss_pred CCCEEEEECCchHHHH-HH----CCCeEEEeec-cCC----CCCC-----------CHHHHHHHHHHHHH---cCCCEEE
Confidence 3444555666666666 66 7888776532 111 1122 34566677777776 4589999
Q ss_pred eCCCch--hHHHHHHHcCCCeEEE
Q 041902 118 YSLLLP--WTAEVARAYHLPSALL 139 (470)
Q Consensus 118 ~d~~~~--~~~~~A~~~giP~i~~ 139 (470)
++..+. .+..+|+..|++.+.+
T Consensus 245 ~e~~~~~~~~~~ia~e~g~~v~~l 268 (312)
T 2o1e_A 245 FEEIASSKVADTLASEIGAKTEVL 268 (312)
T ss_dssp CSSCCCHHHHHHHHHHTCCEEECC
T ss_pred EeCCCChHHHHHHHHHhCCcEEEe
Confidence 997665 4678899999998764
No 310
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.10 E-value=90 Score=27.42 Aligned_cols=30 Identities=13% Similarity=-0.094 Sum_probs=20.7
Q ss_pred CCccEEEeCCCch--hHHHHHHHcCCCeEEEe
Q 041902 111 QPFTCLVYSLLLP--WTAEVARAYHLPSALLW 140 (470)
Q Consensus 111 ~~pDlvv~d~~~~--~~~~~A~~~giP~i~~~ 140 (470)
.+||+||...... ....--+..|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 4699999986542 23344457899999863
No 311
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.08 E-value=1.4e+02 Score=26.25 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=25.9
Q ss_pred cCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 7 RQHQPHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
+...||.++++.++.| + =..+|++|.++|++|.++...
T Consensus 3 ~~~~~k~vlVTGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 3 LGRFVRHALITAGTKG-L--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp ---CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred cccccCEEEEeCCCch-h--HHHHHHHHHHCCCEEEEEcCC
Confidence 3445677777766543 2 247899999999999988543
No 312
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=20.05 E-value=2.6e+02 Score=27.23 Aligned_cols=94 Identities=13% Similarity=0.196 Sum_probs=50.8
Q ss_pred hHHHHhhccCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEee
Q 041902 267 EYYMEWLSSKPKSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVP 346 (470)
Q Consensus 267 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~ 346 (470)
..+.+++...+.+.++.|+-++... ...+.+...|...+..+.+.+-.+ . ...+.+. +.- .
T Consensus 80 ~~l~~~l~~~g~~rvlIVtd~~~~~---~~~~~v~~~L~~~gi~~~~~~~~g-e--------~~~~~v~-~~~------~ 140 (450)
T 1ta9_A 80 TRSYMYVKKWATKSAVVLADQNVWN---ICANKIVDSLSQNGMTVTKLVFGG-E--------ASLVELD-KLR------K 140 (450)
T ss_dssp GGHHHHHTTTCSSEEEEEEEHHHHH---HTHHHHHHHHHHTTCEEEEEEECS-C--------CCHHHHH-HHH------T
T ss_pred HHHHHHHHhcCCCEEEEEECccHHH---HHHHHHHHHHHHCCCeEEEEeeCC-C--------CCHHHHH-HHH------H
Confidence 3455555544443466666444332 356778888888877664333222 1 1111221 110 1
Q ss_pred ccChhhhccccccccceeccCchhhhhh-----hhcCCcEeecccc
Q 041902 347 WCSQVEVLSHEAVGCFVTHCGWNSSLES-----LVCGVPVVAFPQW 387 (470)
Q Consensus 347 ~vp~~~vl~~~~v~~~ItHGG~gt~~ea-----l~~GvP~v~~P~~ 387 (470)
.+- ..+++ +|-=|| ||+..+ ...|+|.+++|..
T Consensus 141 ~~~-----~~~D~--IIAvGG-GSviD~AK~iA~~~giP~I~IPTT 178 (450)
T 1ta9_A 141 QCP-----DDTQV--IIGVGG-GKTMDSAKYIAHSMNLPSIICPTT 178 (450)
T ss_dssp TSC-----TTCCE--EEEEES-HHHHHHHHHHHHHTTCCEEEEESS
T ss_pred HHh-----hCCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEEeCC
Confidence 111 14566 888887 665553 5579999999986
No 313
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=20.03 E-value=5.9e+02 Score=24.51 Aligned_cols=142 Identities=12% Similarity=0.057 Sum_probs=75.7
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCchhhhHHHHHHhCCCeEEeeccChhhhcccc
Q 041902 278 KSSVIYVAFGTICVLEKRQVEEIARGLLDSGHPFLWVIREHENKDKDKGEDDVVMKYKEELNEKGMIVPWCSQVEVLSHE 357 (470)
Q Consensus 278 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~v~~~vp~~~vl~~~ 357 (470)
..+.|-|=+||.. +....+++...|+..|.++-+-+-.- + ..|+.+.+.. -+.. =...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa-H--------R~p~~~~~~~----------~~~~-~~g~ 321 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA-H--------KGPDETLRIK----------AEYE-GDGI 321 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-T--------TCHHHHHHHH----------HHHH-TTCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec-c--------CCHHHHHHHH----------HHHH-HCCC
Confidence 3356777788876 56678889999999998876554433 2 4454332111 0000 0012
Q ss_pred -ccccceeccCch----hhhhhhhcCCcEeeccccchhhHHHHHHHhhhc--ceeEeeecCCCCcCHHHHHHHHHHHhcC
Q 041902 358 -AVGCFVTHCGWN----SSLESLVCGVPVVAFPQWTDQGTNAKIIVDFCK--TGVRVKANEEGILESDEIKRCLELVMGE 430 (470)
Q Consensus 358 -~v~~~ItHGG~g----t~~eal~~GvP~v~~P~~~DQ~~nA~rl~~~~G--vG~~l~~~~~~~~~~~~l~~~i~~vl~~ 430 (470)
.| +|.=+|.. ++..++ .-+|++.+|....-......+.- +. -|+.+..= ....+...+...|. -+.
T Consensus 322 ~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~-vqmp~g~pvatv-~~~~nAa~~A~~Il-~~~- 394 (425)
T 2h31_A 322 PTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSS-LRLPSGLGCSTV-LSPEGSAQFAAQIF-GLS- 394 (425)
T ss_dssp CEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGT-SSCCSSCCCEEC-CCHHHHHHHHHHHH-HTT-
T ss_pred CeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHH-hcCCCCCceEEe-cCchHHHHHHHHHH-ccC-
Confidence 34 56555543 444444 46899999975322222233332 33 22222210 02234444444443 345
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 041902 431 GDEFRGNSLKWKDLAREA 448 (470)
Q Consensus 431 ~~~~r~~a~~~~~~~~~~ 448 (470)
|+..+++.+..+......
T Consensus 395 ~~~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 395 NHLVWSKLRASILNTWIS 412 (425)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 788888888888776653
No 314
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=20.00 E-value=1.7e+02 Score=26.28 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=22.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCc
Q 041902 11 PHFLLVTFPAQGHINPALQLARRLIRIGTRVTFATTI 47 (470)
Q Consensus 11 ~~il~~~~~~~GH~~P~l~la~~L~~~Gh~V~~~~~~ 47 (470)
|+||+ +|+.|.+-. .|+++|.++||+|+.+...
T Consensus 1 m~vlV--tGatG~iG~--~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVV--TGGAGFIGS--HLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEE--ETTTSHHHH--HHHHHHHHTTCEEEEECCC
T ss_pred CEEEE--ECCCChHHH--HHHHHHHhCCCEEEEEeCC
Confidence 45443 355565543 5688899999999988643
Done!