BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041907
(380 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 166/291 (57%), Gaps = 8/291 (2%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEI 97
FS E+ A++NFS N +G GG G VYKG+L DG++VAVKR ++ + L +F+ E+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL-QFQTEV 86
Query: 98 LTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG--LELAERLDIAI 155
S H NL++L GF ER++V Y+ NG++ L R + L+ +R IA+
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
A L YLH + DP IIHRDVKA+NIL+ E+ A V DFG A++ D H+ V+
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXAVR 204
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKER--VTIRWAMQCL 273
GT G++ P+YL T + +EK+DV+ +GV+L+E++TG+ + + + + + W L
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 274 KAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
K ++D L+ + VE+++ +A +C + RP M + +L
Sbjct: 265 KEKKLEALVDVDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 163/297 (54%), Gaps = 20/297 (6%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWS 101
++ +AT NF IG G G VYKG L+DG+ VA+KR E + E L++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--ERLDIAIDVAH 159
+ H +LV L GF + +E I++ +Y+ NG L+ HL G + ++ +RL+I I A
Sbjct: 93 R--HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
L YLHT + IIHRDVK+ NIL+ E K+TDFG ++ E +H+ VKGT G
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQ-THLXXVVKGTLG 206
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTI-RWAMQCLKAGDA 278
Y+DP+Y +LTEKSDVYSFGV+L E++ R I P +E V + WA++ G
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQL 265
Query: 279 ILVMDPRLRRTPASNMAVEKILGLADV---CLAPTRQSRPTMKKCAEILWKIRKDFR 332
++DP L A + E + D CLA + + RP+M ++LWK+ R
Sbjct: 266 EQIVDPNL----ADKIRPESLRKFGDTAVKCLALSSEDRPSM---GDVLWKLEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 163/297 (54%), Gaps = 20/297 (6%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWS 101
++ +AT NF IG G G VYKG L+DG+ VA+KR E + E L++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--ERLDIAIDVAH 159
+ H +LV L GF + +E I++ +Y+ NG L+ HL G + ++ +RL+I I A
Sbjct: 93 R--HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
L YLHT + IIHRDVK+ NIL+ E K+TDFG ++ E +H+ VKGT G
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-THLXXVVKGTLG 206
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTI-RWAMQCLKAGDA 278
Y+DP+Y +LTEKSDVYSFGV+L E++ R I P +E V + WA++ G
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQL 265
Query: 279 ILVMDPRLRRTPASNMAVEKILGLADV---CLAPTRQSRPTMKKCAEILWKIRKDFR 332
++DP L A + E + D CLA + + RP+M ++LWK+ R
Sbjct: 266 EQIVDPNL----ADKIRPESLRKFGDTAVKCLALSSEDRPSM---GDVLWKLEYALR 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 163/291 (56%), Gaps = 8/291 (2%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEI 97
FS E+ A++NF N +G GG G VYKG+L DG +VAVKR K + + L+F+ E+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL-KEERTQGGELQFQTEV 78
Query: 98 LTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG--LELAERLDIAI 155
S H NL++L GF ER++V Y+ NG++ L R + L+ +R IA+
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
A L YLH + DP IIHRDVKA+NIL+ E+ A V DFG A++ D H+ V+
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXAVR 196
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKER--VTIRWAMQCL 273
G G++ P+YL T + +EK+DV+ +GV+L+E++TG+ + + + + + W L
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 274 KAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
K ++D L+ + VE+++ +A +C + RP M + +L
Sbjct: 257 KEKKLEALVDVDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 164/301 (54%), Gaps = 20/301 (6%)
Query: 37 NFSFEEIYKATENFSP------ANKIGEGGSGTVYKGKLKDGSIVAVKR--ARKNKHDKC 88
+FSF E+ T NF NK+GEGG G VYKG + + + VAVK+ A + +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-LEL 147
L +F EI +K +H NLV+L GF GD+ +V Y+ NG+L + L G L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
R IA A+ + +LH IHRD+K++NIL+ E AK++DFG AR SE+ A
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK-FAQ 188
Query: 208 SHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI-ESKKPIKERVTI 266
+ + +++ GT Y+ P+ LR ++T KSD+YSFGV+L+E++TG + E ++P + +
Sbjct: 189 TVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 245
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWK 326
+ +D ++ A + +VE + +A CL + RP +KK ++L +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 327 I 327
+
Sbjct: 304 M 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 163/301 (54%), Gaps = 20/301 (6%)
Query: 37 NFSFEEIYKATENFSP------ANKIGEGGSGTVYKGKLKDGSIVAVKR--ARKNKHDKC 88
+FSF E+ T NF NK+GEGG G VYKG + + + VAVK+ A + +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-LEL 147
L +F EI +K +H NLV+L GF GD+ +V Y+ NG+L + L G L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
R IA A+ + +LH IHRD+K++NIL+ E AK++DFG AR SE+ A
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK-FAQ 188
Query: 208 SHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI-ESKKPIKERVTI 266
+ + ++ GT Y+ P+ LR ++T KSD+YSFGV+L+E++TG + E ++P + +
Sbjct: 189 TVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 245
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWK 326
+ +D ++ A + +VE + +A CL + RP +KK ++L +
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 327 I 327
+
Sbjct: 304 M 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 162/301 (53%), Gaps = 20/301 (6%)
Query: 37 NFSFEEIYKATENFSP------ANKIGEGGSGTVYKGKLKDGSIVAVKR--ARKNKHDKC 88
+FSF E+ T NF NK+GEGG G VYKG + + + VAVK+ A + +
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 66
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-LEL 147
L +F EI +K +H NLV+L GF GD+ +V Y+ NG+L + L G L
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
R IA A+ + +LH IHRD+K++NIL+ E AK++DFG AR SE+ A
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK-FAQ 182
Query: 208 SHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI-ESKKPIKERVTI 266
+ ++ GT Y+ P+ LR ++T KSD+YSFGV+L+E++TG + E ++P + +
Sbjct: 183 XVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 239
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWK 326
+ +D ++ A + +VE + +A CL + RP +KK ++L +
Sbjct: 240 IKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
Query: 327 I 327
+
Sbjct: 298 M 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 155/298 (52%), Gaps = 20/298 (6%)
Query: 37 NFSFEEIYKATENFSP------ANKIGEGGSGTVYKGKLKDGSIVAVKR--ARKNKHDKC 88
+FSF E+ T NF NK GEGG G VYKG + + + VAVK+ A + +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 63
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-LEL 147
L +F EI +K +H NLV+L GF GD+ +V Y NG+L + L G L
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
R IA A+ + +LH IHRD+K++NIL+ E AK++DFG AR SE+ A
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK-FAQ 179
Query: 208 SHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI-ESKKPIKERVTI 266
+++ GT Y P+ LR ++T KSD+YSFGV+L+E++TG + E ++P + +
Sbjct: 180 XVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 236
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ +D + A + +VE +A CL + RP +KK ++L
Sbjct: 237 IKEEIEDEEKTIEDYIDK--KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
KIG G GTV++ + GS VAVK + + EF E+ ++ H N+V G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGG-NGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ IV EY+ G+L L G L+ RL +A DVA + YLH +PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTE 233
HRD+K+ N+L+ +K KV DFG +R+ ++ S GT ++ P+ LR E
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLK---ASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 234 KSDVYSFGVLLVEMMTGRYPIESKKPIK 261
KSDVYSFGV+L E+ T + P + P +
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 8/209 (3%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
KIG G GTV++ + GS VAVK + + EF E+ ++ H N+V G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGG-NGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ IV EY+ G+L L G L+ RL +A DVA + YLH +PPI+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ-VKGTAGYLDPDYLRTYQLT 232
HR++K+ N+L+ +K KV DFG +R+ A + +S++ GT ++ P+ LR
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
EKSDVYSFGV+L E+ T + P + P +
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 71 GY-STAPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 73 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 98 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S SH Q+ G+ ++ P+ +R
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 75 GY-STKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR---TY 229
IHRD+K++NI + E K+ DFG A + S SH Q+ G+ ++ P+ +R +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 87 GY-STAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR---TY 229
IHRD+K++NI + E K+ DFG A S SH Q+ G+ ++ P+ +R +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A S SH Q+ G+ ++ P+ +R
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 91 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A S SH Q+ G+ ++ P+ +R
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 31/275 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E + ++G G G V GK K VAVK ++ + EF E T K+ H
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPK 64
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LVK +G IV EY+ NG L +L G GLE ++ L++ DV + +L ++
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
IHRD+ A N L+ L KV+DFG R +D VS + T+ VK +A P+
Sbjct: 124 Q---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA----PEV 176
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDP 284
++ + KSDV++FG+L+ E+ + G+ P + L +++
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYD-----------------LYTNSEVVLKVS 219
Query: 285 RLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK 319
+ R ++A + I + C + RPT ++
Sbjct: 220 QGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQ 254
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A S SH Q+ G+ ++ P+ +R
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G GTVYKGK VAVK L FKNE+ K H+N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G+ + IV ++ +L HL E+ + +DIA A + YLH S I
Sbjct: 87 GY-STKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR---TY 229
IHRD+K++NI + E K+ DFG A S SH Q+ G+ ++ P+ +R +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVY+FG++L E+MTG+ P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+ +IG G GTVYKGK VAVK + F+NE+ K H+N++
Sbjct: 41 STRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G++ D IV ++ +L +HL + ++ + +DIA A + YLH + I
Sbjct: 99 GYMTK-DNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ-- 230
IHRD+K++NI + E L K+ DFG A + S + Q G+ ++ P+ +R
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE-QPTGSVLWMAPEVIRMQDNN 212
Query: 231 -LTEKSDVYSFGVLLVEMMTGRYP 253
+ +SDVYS+G++L E+MTG P
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV+EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV+EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 330
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 386
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 442
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 485
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E KI H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKIRHEKLVQLYAV 81
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 82 V--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 192
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 71
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 72 V--SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 126
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTA----PEAALYGRF 182
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 226
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 247
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 248 V--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 358
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 402
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 74
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 75 V--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 129
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 185
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 229
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 247
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 248 V--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 358
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 402
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + F E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 70
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 71 V--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 125
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 181
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 225
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 72
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 73 V--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 127
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 183
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 227
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + F E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV+EY+ G L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + F E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV EY+ G L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 247
Query: 115 LEHGDERIIVV-EYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I +V EY+ G+L + L G G L L + +D+A +A + Y+ + +
Sbjct: 248 V--SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 358
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 402
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 78
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D++ +A + Y+ + +
Sbjct: 79 V--SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YV 133
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTA----PEAALYGRF 189
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 233
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 18/224 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 78
Query: 115 LEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+ +E I IV EY+ G+L + L G G L L + +D++ +A + Y+ + +
Sbjct: 79 V--SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YV 133
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQL 231
HRD++A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRF 189
Query: 232 TEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
T KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD+ A+NIL+ E L KV DFG AR+ E++ + + +K TA P+ + T
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G+G G V+ G + VA+K + L+ E K+ H LV+L+
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 248
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
+ + IV EY+ G+L + L G G L L + +D+A +A + Y+ + +H
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 304
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQLT 232
RD++A+NIL+ E L KV DFG R+ E++ + + +K TA P+ + T
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTA----PEAALYGRFT 360
Query: 233 EKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
KSDV+SFG+LL E+ T GR YP + + ++V + M C
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 403
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 30/280 (10%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E+ ++G G G V+ G + + VAVK + LE N + T ++H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKT---LQHDK 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ G+L + L G + L + +D + +A + Y+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+N+L++E L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEA 182
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDP 284
+ T KSDV+SFG+LL E++T G+ P + M L G + P
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD-------VMTALSQGYRM----P 231
Query: 285 RLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
R+ P +++ + +C + RPT +L
Sbjct: 232 RVENCP------DELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G +G V+ G + VAVK ++ L N + +++H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE--EDSAVSHISTQVKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E E +A +K TA P+
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTA----PEA 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKN-KHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+G GG V+ + L+D VAVK R + D L F+ E + + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 114 FLEH----GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G IV+EYV TLR+ + G + A +++ D AL + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQALNFSHQNG- 136
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IIHRDVK +NILI+ KV DFG AR + + V GTA YL P+ R
Sbjct: 137 --IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ +SDVYS G +L E++TG P P+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKC--LLLEFKNEILTWSKIEHLNLVKLFG 113
IG GG G VY+ G VAVK AR + + + + E ++ ++H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
+V+E+ G L L G+ + ++ A+ +A + YLH + PII
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 174 HRDVKASNILITEKLR--------AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
HRD+K+SNILI +K+ K+TDFG AR + +S G ++ P+
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-----AAGAYAWMAPEV 185
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
+R ++ SDV+S+GVLL E++TG P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 30/280 (10%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E+ K+G G G V+ G + + VAVK + LE N + T ++H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKT---LQHDK 68
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ E++ G+L + L G + L + +D + +A + Y+
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+N+L++E L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 129 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEA 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDP 284
+ T KS+V+SFG+LL E++T G+ P + T M L G + P
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR-------TNADVMSALSQGYRM----P 230
Query: 285 RLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
R+ P +++ + +C + RPT +L
Sbjct: 231 RMENCP------DELYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 16/230 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E+ ++G G G V+ G + VA+K + LE E K++H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLE---EAQIMKKLKHDK 65
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + IV EY+ G+L + L G L+L +D+A VA + Y+
Sbjct: 66 LVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++++NIL+ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 125 N---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTA----PEA 177
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GR--YPIESKKPIKERVTIRWAMQC 272
+ T KSDV+SFG+LL E++T GR YP + + + E+V + M C
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC 227
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 75
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 76 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 135 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 187
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 78
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 79 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 138 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 190
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 77
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 78 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 137 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 189
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 71
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 72 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE--EDSAVSHISTQVKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E E +A +K TA P+
Sbjct: 131 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 183
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 70
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 71 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 130 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEA 182
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 75 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 134 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEA 186
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 75
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 76 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED--SAVSHISTQVKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ +A +K TA P+
Sbjct: 135 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEA 187
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKN-KHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+G GG V+ + L+D VAVK R + D L F+ E + + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 114 FLEH----GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G IV+EYV TLR+ + G + A +++ D AL + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQALNFSHQNG- 136
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IIHRDVK +NI+I+ KV DFG AR + + V GTA YL P+ R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ +SDVYS G +L E++TG P P+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 79
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 80 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED--SAVSHISTQVKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ +A +K TA P+
Sbjct: 139 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEA 191
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 23/214 (10%)
Query: 55 KIGEGGSGTVYKGKL-KDGSIVAVKRARKNKHDKCLLL-----EFKNEILTWSKIEHLNL 108
+IG+GG G V+KG+L KD S+VA+K + + EF+ E+ S + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
VKL+G + H R+ V+E+V G L L + + ++ + +L + +D+A + Y+
Sbjct: 86 VKLYGLM-HNPPRM-VMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN-Q 141
Query: 169 DPPIIHRDVKASNILITE-----KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+PPI+HRD+++ NI + + AKV DFG ++ S H + + G ++ P
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------VHSVSGLLGNFQWMAP 195
Query: 224 DYLRTYQ--LTEKSDVYSFGVLLVEMMTGRYPIE 255
+ + + TEK+D YSF ++L ++TG P +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 70 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 129 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEA 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V ++ G +VAVK+ K + LL NE++ +H N+V+++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYN 215
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+ LH +I
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VI 269
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----RKXLVGTPYWMAPELISRLPYG 325
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P ++ P+K IR
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V ++ G +VAVK+ K + LL NE++ +H N+V+++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYN 95
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+ LH +I
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VI 149
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----RKXLVGTPYWMAPELISRLPYG 205
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P ++ P+K IR
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 64
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 65 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL+++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 124 N---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEA 176
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V ++ G +VAVK+ K + LL NE++ +H N+V+++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYN 93
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+ LH +I
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VI 147
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----RKXLVGTPYWMAPELISRLPYG 203
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P ++ P+K IR
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V ++ G +VAVK+ K + LL NE++ +H N+V+++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYN 84
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+ LH +I
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VI 138
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----RKXLVGTPYWMAPELISRLPYG 194
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P ++ P+K IR
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 23/214 (10%)
Query: 55 KIGEGGSGTVYKGKL-KDGSIVAVKRARKNKHDKCLLL-----EFKNEILTWSKIEHLNL 108
+IG+GG G V+KG+L KD S+VA+K + + EF+ E+ S + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
VKL+G + H R+ V+E+V G L L + + ++ + +L + +D+A + Y+
Sbjct: 86 VKLYGLM-HNPPRM-VMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN-Q 141
Query: 169 DPPIIHRDVKASNILITE-----KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+PPI+HRD+++ NI + + AKV DFG ++ S H + + G ++ P
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS------VHSVSGLLGNFQWMAP 195
Query: 224 DYLRTYQ--LTEKSDVYSFGVLLVEMMTGRYPIE 255
+ + + TEK+D YSF ++L ++TG P +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V ++ G +VAVK+ K + LL NE++ +H N+V+++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYN 138
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+ LH +I
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VI 192
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----RKXLVGTPYWMAPELISRLPYG 248
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P ++ P+K IR
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 283
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKN-KHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+G GG V+ + L+D VAVK R + D L F+ E + + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 114 FLEH----GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G IV+EYV TLR+ + G + A +++ D AL + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQALNFSHQNG- 136
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IIHRDVK +NI+I+ KV DFG AR + + V GTA YL P+ R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESKKP 259
+ +SDVYS G +L E++TG P P
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 14/215 (6%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V ++ G +VAVK+ K + LL NE++ +H N+V+++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYN 88
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+ LH +I
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VI 142
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR----RKXLVGTPYWMAPELISRLPYG 198
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P ++ P+K IR
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 23/214 (10%)
Query: 55 KIGEGGSGTVYKGKL-KDGSIVAVKRARKNKHDKCLLL-----EFKNEILTWSKIEHLNL 108
+IG+GG G V+KG+L KD S+VA+K + + EF+ E+ S + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
VKL+G + H R+ V+E+V G L L + + ++ + +L + +D+A + Y+
Sbjct: 86 VKLYGLM-HNPPRM-VMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN-Q 141
Query: 169 DPPIIHRDVKASNILITE-----KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+PPI+HRD+++ NI + + AKV DF ++ S H + + G ++ P
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------VHSVSGLLGNFQWMAP 195
Query: 224 DYLRTYQ--LTEKSDVYSFGVLLVEMMTGRYPIE 255
+ + + TEK+D YSF ++L ++TG P +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E ++G G G V+ G + VAVK ++ L N + +++H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLM---KQLQHQR 65
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LV+L+ + + I+ EY+ NG+L + L G L + + LD+A +A + ++
Sbjct: 66 LVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED--SAVSHISTQVKGTAGYLDPDY 225
+ IHR+++A+NIL+++ L K+ DFG AR+ E++ +A +K TA P+
Sbjct: 125 N---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEA 177
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL E++T GR P
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 138/274 (50%), Gaps = 21/274 (7%)
Query: 55 KIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V K G VAVK+ K + LL NE++ H N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL--FNEVVIMRDYHHDNVVDMYS 109
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+E++ G L + + N ++A + + V AL+YLH +I
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---TVCLSVLRALSYLHNQG---VI 163
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ +IL+T R K++DFGF A++S+E + GT ++ P+ +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK----RKXLVGTPYWMAPEVISRLPYG 219
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAM----QCLKAGDAIL--VMDPRL 286
+ D++S G++++EM+ G P ++ P++ IR ++ + L ++L +D L
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLML 279
Query: 287 RRTPASNMAVEKILGLADVCLA-PTRQSRPTMKK 319
R P+ +++LG + LA P P M++
Sbjct: 280 VREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQ 313
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E+ +IG G G V+ G+L+ D ++VAVK R+ L +F E + H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHP 172
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+V+L G IV+E V G L G L + L + D A + YL +
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLES 231
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS-----TQVKGTAGYL 221
IHRD+ A N L+TEK K++DFG +R EE V S VK TA
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTA--- 283
Query: 222 DPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVTIRWAMQCLKAGDA 278
P+ L + + +SDV+SFG+LL E + YP S + +E V K G
Sbjct: 284 -PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE--------KGG-- 332
Query: 279 ILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDFR 332
R P + + + L + C A RP+ + L IRK R
Sbjct: 333 ---------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKN-KHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+G GG V+ + L+ VAVK R + D L F+ E + + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 114 FLEH----GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G IV+EYV TLR+ + G + A +++ D AL + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQALNFSHQNG- 136
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IIHRDVK +NI+I+ KV DFG AR + + V GTA YL P+ R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ +SDVYS G +L E++TG P P+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E+ +IG G G V+ G+L+ D ++VAVK R+ L +F E + H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHP 172
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+V+L G IV+E V G L G L + L + D A + YL +
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLES 231
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS-----TQVKGTAGYL 221
IHRD+ A N L+TEK K++DFG +R EE V S VK TA
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTA--- 283
Query: 222 DPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVTIRWAMQCLKAGDA 278
P+ L + + +SDV+SFG+LL E + YP S + +E V K G
Sbjct: 284 -PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE--------KGG-- 332
Query: 279 ILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDFR 332
R P + + + L + C A RP+ + L IRK R
Sbjct: 333 ---------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V G + G+ VAVK + + + L E ++T ++ H NLV+L G +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAE--ASVMT--QLRHSNLVQLLGVI 255
Query: 116 -EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
E IV EY+ G+L ++L RG + L L ++DV A+ YL + +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N+L++E AKV+DFG + E S VK TA P+ LR + + K
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTA----PEALREKKFSTK 366
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERV 264
SDV+SFG+LL E+ + GR P + P+K+ V
Sbjct: 367 SDVWSFGILLWEIYSFGRVPY-PRIPLKDVV 396
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V G + G+ VAVK + + + L E ++T ++ H NLV+L G +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAE--ASVMT--QLRHSNLVQLLGVI 83
Query: 116 -EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
E IV EY+ G+L ++L RG + L L ++DV A+ YL + +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N+L++E AKV+DFG + E S VK TA P+ LR + + K
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTA----PEALREKKFSTK 194
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERV 264
SDV+SFG+LL E+ + GR P + P+K+ V
Sbjct: 195 SDVWSFGILLWEIYSFGRVPY-PRIPLKDVV 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V G + G+ VAVK + + + L E ++T ++ H NLV+L G +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAE--ASVMT--QLRHSNLVQLLGVI 68
Query: 116 -EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
E IV EY+ G+L ++L RG + L L ++DV A+ YL + +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N+L++E AKV+DFG + E S VK TA P+ LR + + K
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTA----PEALREKKFSTK 179
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERV 264
SDV+SFG+LL E+ + GR P + P+K+ V
Sbjct: 180 SDVWSFGILLWEIYSFGRVPY-PRIPLKDVV 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKN-KHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+G GG V+ + L+ VAVK R + D L F+ E + + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 114 FLEH----GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G IV+EYV TLR+ + G + A +++ D AL + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQALNFSHQNG- 136
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IIHRDVK +NI+I+ KV DFG AR + + V GTA YL P+ R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ +SDVYS G +L E++TG P P+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKN-----KHDKCLLLEFKNEILTWSK 102
E + +K+G GG TVY L + +I+ +K A K + + L F+ E+ S+
Sbjct: 11 ERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 103 IEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+ H N+V + E D +V+EY+ TL E+++ G ++ A ++ + +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA--INFTNQILDGIK 125
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
+ H D I+HRD+K NILI K+ DFG A+ E S + V GT Y
Sbjct: 126 HAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTVQYFS 180
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
P+ + E +D+YS G++L EM+ G P
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 17/211 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V G + G+ VAVK + + + L E ++T ++ H NLV+L G +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAE--ASVMT--QLRHSNLVQLLGVI 74
Query: 116 -EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
E IV EY+ G+L ++L RG + L L ++DV A+ YL + +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N+L++E AKV+DFG + E S VK TA P+ LR + K
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWTA----PEALREAAFSTK 185
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERV 264
SDV+SFG+LL E+ + GR P + P+K+ V
Sbjct: 186 SDVWSFGILLWEIYSFGRVPY-PRIPLKDVV 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 56 IGEGGSGTVYKGKLKDGS-----IVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
IG G G VYKG LK S VA+K + +K ++F E + H N+++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK-QRVDFLGEAGIMGQFSHHNIIR 110
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L G + +I+ EY+ NG L + L + G + + + + +A + YL +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMN-- 167
Query: 171 PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A NIL+ L KV+DFG +R+ E+D ++ ++ K + P+ + +
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 231 LTEKSDVYSFGVLLVEMMT 249
T SDV+SFG+++ E+MT
Sbjct: 227 FTSASDVWSFGIVMWEVMT 245
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKN-KHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+G GG V+ + L+ VAVK R + D L F+ E + + H +V ++
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 114 FLEH----GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G IV+EYV TLR+ + G + +++ D AL + H
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG- 153
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IIHRDVK +NI+I+ KV DFG AR + + V GTA YL P+ R
Sbjct: 154 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ +SDVYS G +L E++TG P P+
Sbjct: 212 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G G V+ G + VA+K R+ + +F E K+ H LV+L+
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLY 68
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL-DIAIDVAHALTYLHTYSDPP 171
G +V E++ +G L ++L R GL AE L + +DV + YL S
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS--- 123
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+IHRD+ A N L+ E KV+DFG R +D S ST K + P+ +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSFSRY 181
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESK 257
+ KSDV+SFGVL+ E+ + G+ P E++
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENR 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 55 KIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G SGTVY + G VA+++ + K L+ NEIL + ++ N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNYLD 84
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+EY+ G+L + + + ++A + + AL +LH+ +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQ---VI 138
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ NIL+ K+TDFGF A+++ E S S ++ GT ++ P+ +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----EMVGTPYWMAPEVVTRKAYG 194
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
K D++S G++ +EM+ G P ++ P++
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I++E++ G L ++L + L +A ++ A+ YL +
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA----PESLAYNK 189
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 190 FSIKSDVWAFGVLLWEIAT 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I++E++ G L ++L + L +A ++ A+ YL +
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 193
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I++E++ G L ++L + L +A ++ A+ YL +
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA----PESLAYNK 186
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G G V+ G + VA+K R+ + +F E K+ H LV+L+
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLY 71
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL-DIAIDVAHALTYLHTYSDPP 171
G +V E++ +G L ++L R GL AE L + +DV + YL +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 126
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+IHRD+ A N L+ E KV+DFG R +D S ST K + P+ +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSFSRY 184
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESK 257
+ KSDV+SFGVL+ E+ + G+ P E++
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPYENR 211
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G G V+ G + VA+K R+ + +F E K+ H LV+L+
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLY 66
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL-DIAIDVAHALTYLHTYSDPP 171
G +V E++ +G L ++L R GL AE L + +DV + YL +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 121
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+IHRD+ A N L+ E KV+DFG R +D S ST K + P+ +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSFSRY 179
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESK 257
+ KSDV+SFGVL+ E+ + G+ P E++
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENR 206
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G G V+ G + VA+K R+ + +F E K+ H LV+L+
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLY 69
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL-DIAIDVAHALTYLHTYSDPP 171
G +V E++ +G L ++L R GL AE L + +DV + YL +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 124
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+IHRD+ A N L+ E KV+DFG R +D S ST K + P+ +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSFSRY 182
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESK 257
+ KSDV+SFGVL+ E+ + G+ P E++
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIPYENR 209
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 55 KIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G SGTVY + G VA+++ + K L+ NEIL + ++ N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNYLD 84
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+EY+ G+L + + + ++A + + AL +LH+ +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQ---VI 138
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ NIL+ K+TDFGF A+++ E S S + GT ++ P+ +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAYG 194
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
K D++S G++ +EM+ G P ++ P++
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G G V+ G + VA+K R+ + +F E K+ H LV+L+
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLY 68
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL-DIAIDVAHALTYLHTYSDPP 171
G +V E++ +G L ++L R GL AE L + +DV + YL +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 123
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+IHRD+ A N L+ E KV+DFG R +D S ST K + P+ +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSFSRY 181
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESK 257
+ KSDV+SFGVL+ E+ + G+ P E++
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENR 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I++E++ G L ++L + L +A ++ A+ YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 188
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I++E++ G L ++L + L +A ++ A+ YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 188
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 55 KIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G SGTVY + G VA+++ + K L+ NEIL + ++ N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNYLD 84
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+EY+ G+L + + + ++A + + AL +LH+ +I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQ---VI 138
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ NIL+ K+TDFGF A+++ E S S + GT ++ P+ +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV----GTPYWMAPEVVTRKAYG 194
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
K D++S G++ +EM+ G P ++ P++
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLR 223
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 55 KIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G SGTVY + G VA+++ + K L+ NEIL + ++ N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNYLD 85
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+EY+ G+L + + + ++A + + AL +LH+ +I
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQ---VI 139
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HRD+K+ NIL+ K+TDFGF A+++ E S S + GT ++ P+ +
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAYG 195
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
K D++S G++ +EM+ G P ++ P++
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA----PESLAYNK 193
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 193
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 136
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 192
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 193 FSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 188
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA----PESLAYNK 186
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 137
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 193
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 193
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 188
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 190
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 190
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 145
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 201
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 202 FSIKSDVWAFGVLLWEIAT 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 188
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 188
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA----PESLAYNK 186
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG AR+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 18/261 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLE-FKNEILTWSKIEH 105
E+F N +G+G VY+ + + G VA+K K K +++ +NE+ +++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
++++L+ + E + +V+E NG + +L R E R + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYLH 129
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFA---RMSEEDSAVSHISTQVKGTAGYLD 222
++ I+HRD+ SN+L+T + K+ DFG A +M E + GT Y+
Sbjct: 130 SHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT------LCGTPNYIS 180
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES---KKPIKERVTIRWAMQCLKAGDAI 279
P+ +SDV+S G + ++ GR P ++ K + + V + M + +A
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAK 240
Query: 280 LVMDPRLRRTPASNMAVEKIL 300
++ LRR PA +++ +L
Sbjct: 241 DLIHQLLRRNPADRLSLSSVL 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+IG G G V+ G + VA+K ++ + +F E K+ H LV+L+
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKLVQLY 88
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL-DIAIDVAHALTYLHTYSDPP 171
G +V E++ +G L ++L R GL AE L + +DV + YL +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 143
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+IHRD+ A N L+ E KV+DFG R +D S ST K + P+ +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--STGTKFPVKWASPEVFSFSRY 201
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESK 257
+ KSDV+SFGVL+ E+ + G+ P E++
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENR 228
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 55 KIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G SGTVY + G VA+++ + K L+ NEIL + ++ N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIVNYLD 85
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
GDE +V+EY+ G+L + + + ++A + + AL +LH+ +I
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQ---VI 139
Query: 174 HRDVKASNILITEKLRAKVTDFGF-ARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
HR++K+ NIL+ K+TDFGF A+++ E S S + GT ++ P+ +
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV----GTPYWMAPEVVTRKAYG 195
Query: 233 EKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
K D++S G++ +EM+ G P ++ P++
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLR 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 102
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 161
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 162 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 262
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 263 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 75
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 134
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 135 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 235
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 236 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 98/199 (49%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G IV EY+ G L ++L + L +A ++ A+ YL +
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---F 151
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNT 207
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 208 FSIKSDVWAFGVLLWEIAT 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 92
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV EY+ NG+L L + + + + +A + YL
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 151
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 152 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 252
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 253 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 18/260 (6%)
Query: 56 IGEGGSGTVYKGKLK----DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V G+LK VA+K + +K +F E + +H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK-QRRDFLCEASIMGQFDHPNVVHL 109
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G + G +IV+E++ NG L L G + + + + +A + YL +D
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGMRYL---ADMG 165
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+HRD+ A NIL+ L KV+DFG +R+ E+D + +T K + P+ ++ +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPI------ESKKPIKERVTIRWAMQCLKAGDAILVMDP 284
T SDV+S+G+++ E+M+ G P + K I+E + M C AG L++D
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDC-PAGLHQLMLDC 284
Query: 285 RLRRTPASNMAVEKILGLAD 304
++ A E+I+G+ D
Sbjct: 285 -WQKERAERPKFEQIVGILD 303
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 12/214 (5%)
Query: 55 KIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG +G V + K G VAVK K + LL NE++ +H N+V+++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL--FNEVVIMRDYQHFNVVEMYK 109
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
G+E +++E++ G L + + N ++A + V AL YLH +I
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA---TVCEAVLQALAYLHAQG---VI 163
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTE 233
HRD+K+ +IL+T R K++DFGF +D + GT ++ P+ +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK---XLVGTPYWMAPEVISRSLYAT 220
Query: 234 KSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
+ D++S G++++EM+ G P S P++ +R
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 254
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 339
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHR++ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 395
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 396 FSIKSDVWAFGVLLWEIAT 414
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 378
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHR++ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 434
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 435 FSIKSDVWAFGVLLWEIAT 453
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T++ GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTELCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 336
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHR++ A N L+ E KV DFG +R+ D+ +H + +K TA P+ L +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNK 392
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 393 FSIKSDVWAFGVLLWEIAT 411
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E+ K+G G G V+ + VAVK + L N + T ++H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT---LQHDK 71
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LVKL + + I+ E++ G+L + L G+ L + +D + +A + ++
Sbjct: 72 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED--SAVSHISTQVKGTAGYLDPDY 225
+ IHRD++A+NIL++ L K+ DFG AR+ E++ +A +K TA P+
Sbjct: 131 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEA 183
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL+E++T GR P
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 124
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 125 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----CHAPSSRRTTLSGTLDYLPP 176
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + + ++A+AL+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 149
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 150 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRTTLCGTLDYLPP 201
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ + + +K TA P+ L +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA----PESLAYNK 189
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 190 FSIKSDVWAFGVLLWEIAT 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + + ++A+AL+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 124
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 125 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLPP 176
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 128
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 129 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLPP 180
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 126
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 127 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 178
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 56 IGEGGSGTVYKGKLK---DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G SG V G+L+ + +A K + + +F +E + +H N+++L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + G +IV EY+ NG+L L G + + + + V + YL SD
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYL---SDLGY 172
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HRD+ A N+L+ L KV+DFG +R+ E+D ++ +T K + P+ + +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 233 EKSDVYSFGVLLVEMM 248
SDV+SFGV++ E++
Sbjct: 233 SASDVWSFGVVMWEVL 248
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + + ++A+AL+Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 140
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 141 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 192
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 54 NKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+K+G G G VY+G K S+ VAVK K D + EF E +I+H NLV+L
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G I+ E++ G L ++L + L +A ++ A+ YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDYLRTYQ 230
IHRD+ A N L+ E KV DFG +R+ D+ + + +K TA P+ L +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA----PESLAYNK 190
Query: 231 LTEKSDVYSFGVLLVEMMT 249
+ KSDV++FGVLL E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 128
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 129 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 180
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 128
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 129 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 180
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTXLCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E+ K+G G G V+ + VAVK + L N + T ++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT---LQHDK 244
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LVKL + + I+ E++ G+L + L G+ L + +D + +A + ++
Sbjct: 245 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKGTAGYLDPDY 225
+ IHRD++A+NIL++ L K+ DFG AR+ E++ + + +K TA P+
Sbjct: 304 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEA 356
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ T KSDV+SFG+LL+E++T GR P
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 152
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 122
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 123 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 174
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 127
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 179
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 126
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 127 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 178
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY G + + L + + ++A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSY 128
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 129 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 180
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 119
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 177
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 178 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 230
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDA 278
Y+ P+ L+ + +SD++S G+ LVEM GRYPI P + + C GDA
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELMFGCQVEGDA 285
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 94
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 155 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDX 205
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 260
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 261 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 306
Query: 325 WKI 327
+I
Sbjct: 307 DRI 309
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV E + NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 56 IGEGGSGTVYKGKLK---DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G SG V G+L+ + +A K + + +F +E + +H N+++L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + G +IV EY+ NG+L L G + + + + V + YL SD
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYL---SDLGY 172
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HRD+ A N+L+ L KV+DFG +R+ E+D + +T K + P+ + +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 233 EKSDVYSFGVLLVEMM 248
SDV+SFGV++ E++
Sbjct: 233 SASDVWSFGVVMWEVL 248
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 172
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 233 FTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 153
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 24/228 (10%)
Query: 38 FSFEEIYKATENFSPA---------NKIGEGGSGTVYKGKLKDGS----IVAVKRARKNK 84
F+FE+ +A F+ IG G G V G+LK VA+K +
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 85 HDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL---DGRG 141
DK +F +E + +H N++ L G + +I+ EY+ NG+L L DGR
Sbjct: 70 TDK-QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR- 127
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
+ + + + + + YL SD +HRD+ A NIL+ L KV+DFG +R+
Sbjct: 128 ---FTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 202 EEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
E+D ++ + K + P+ + + T SDV+S+G+++ E+M+
Sbjct: 182 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 84
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 142
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 143 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 195
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDA 278
Y+ P+ L+ + +SD++S G+ LVEM GRYPI P + + C GDA
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELMFGCQVEGDA 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 150
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 210
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 145
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 205
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 206 FTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 148
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 153
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 120
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P
Sbjct: 121 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPP 172
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+G G G V K K + VA+K+ K ++E + S++ H N+VKL+G
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIESESERKAFIVELRQL----SRVNHPNIVKLYGAC 70
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLEL---AERLDIAIDVAHALTYLHTYSDPPI 172
+ +V+EY G+L L G L A + + + + YLH+ +
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 173 IHRDVKASNILITEK-LRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
IHRD+K N+L+ K+ DFG A + T KG+A ++ P+
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNKGSAAWMAPEVFEGSNY 180
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPA 291
+EK DV+S+G++L E++T R P + R I WA+ R P
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWAVH-------------NGTRPPL 225
Query: 292 SNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
+ I L C + RP+M++ +I+ + + F
Sbjct: 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 152
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+G G G V K K + VA+K+ K ++E + S++ H N+VKL+G
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIESESERKAFIVELRQL----SRVNHPNIVKLYGAC 71
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLEL---AERLDIAIDVAHALTYLHTYSDPPI 172
+ +V+EY G+L L G L A + + + + YLH+ +
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 173 IHRDVKASNILITEKLRA-KVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
IHRD+K N+L+ K+ DFG A + T KG+A ++ P+
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNKGSAAWMAPEVFEGSNY 181
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPA 291
+EK DV+S+G++L E++T R P + R I WA+ R P
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWAVH-------------NGTRPPL 226
Query: 292 SNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
+ I L C + RP+M++ +I+ + + F
Sbjct: 227 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 266
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 151
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 57
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 115
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 168
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDA 278
Y+ P+ L+ + +SD++S G+ LVEM GRYPI P + + C GDA
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELMFGCQVEGDA 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 104
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV E + NG+L L + + + + +A + YL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 163
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 164 ---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 264
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + YL +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL---ASKK 171
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 232 FTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 27/287 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
N S +G G G V G+LK S VA+K + +K +F E + +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFD 75
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L G + +IV E + NG+L L + + + + +A + YL
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYL 134
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
SD +HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+
Sbjct: 135 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
+ + T SDV+S+G++L E+M+ G P W M D I +D
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMS---NQDVIKAVD 235
Query: 284 PRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + + D C R +RP ++ IL K+ ++
Sbjct: 236 EGYRLPPPMDCPAALYQLMLD-CWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 57
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 115
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 168
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDA 278
Y+ P+ L+ + +SD++S G+ LVEM GRYPI P + + C GDA
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELMFGCQVEGDA 223
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 57
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 115
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 168
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDA 278
Y+ P+ L+ + +SD++S G+ LVEM GRYPI P + + C GDA
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELMFGCQVEGDA 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 57
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 115
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 168
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDA 278
Y+ P+ L+ + +SD++S G+ LVEM GRYPI P + + C GDA
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELMFGCQVEGDA 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + + ++A+AL+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 149
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 150 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRDDLCGTLDYLPP 201
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 67
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 123
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S + + K + P+ L + + K
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS--KFPVRWSPPEVLMYSKFSSK 181
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 224
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 225 LASEKVYTIMYSCWHEKADERPTFK 249
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 71
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 127
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S + + K + P+ L + + K
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS--KFPVRWSPPEVLMYSKFSSK 185
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 228
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 229 LASEKVYTIMYSCWHEKADERPTFK 253
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 143
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S + + K + P+ L + + K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS--KFPVRWSPPEVLMYSKFSSK 201
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 244
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFK 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K+ I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 124 CHSKK---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 72
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 128
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S + + K + P+ L + + K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS--KFPVRWSPPEVLMYSKFSSK 186
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 229
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 230 LASEKVYTIMYSCWHEKADERPTFK 254
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 78
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 134
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S + + K + P+ L + + K
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS--KFPVRWSPPEVLMYSKFSSK 192
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 235
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 236 LASEKVYTIMYSCWHEKADERPTFK 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 87
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 143
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S + + K + P+ L + + K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS--KFPVRWSPPEVLMYSKFSSK 201
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 244
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFK 269
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 125
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ +FG++ A S T + GT YL P
Sbjct: 126 CHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTLDYLPP 177
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 125
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 126 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLPP 177
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 126
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 127 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLPP 178
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 126
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ +FG++ A S T + GT YL P
Sbjct: 127 CHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTLDYLPP 178
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY G + + L + + ++A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSY 128
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 129 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLXGTLDYLPP 180
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 94
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 155 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 205
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 260
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 261 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 306
Query: 325 WKI 327
+I
Sbjct: 307 DRI 309
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 123
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 124 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLPP 175
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 87
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 148 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 198
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 253
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 254 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 299
Query: 325 WKI 327
+I
Sbjct: 300 DRI 302
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 126
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 127 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTLDYLPP 178
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + + ++A+AL+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 124
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 125 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDTLCGTLDYLPP 176
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 83
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 144 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 194
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 249
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 250 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 295
Query: 325 WKI 327
+I
Sbjct: 296 DRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 94
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 155 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 205
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 260
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 261 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 306
Query: 325 WKI 327
+I
Sbjct: 307 DRI 309
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKI 103
A E+F +G+G G VY + K I+A+K K + +K + + + E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H N+++L+G+ +++EY GT+ L + + ++A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSY 126
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P
Sbjct: 127 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRDDLCGTLDYLPP 178
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + EK D++S GVL E + G+ P E+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 86
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 147 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 197
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 252
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 253 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 298
Query: 325 WKI 327
+I
Sbjct: 299 DRI 301
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 126/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 79
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + +
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 140 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 190
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 245
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 246 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 291
Query: 325 WKI 327
+I
Sbjct: 292 DRI 294
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 125/301 (41%), Gaps = 56/301 (18%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 135
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + + +
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 196 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 246
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTI 266
K T G ++ P+ L T +SDV+SFGVLL E+ T G P V +
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-------VPV 299
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWK 326
+ LK G R SN E + + D C RPT K+ E L +
Sbjct: 300 EELFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDLDR 349
Query: 327 I 327
I
Sbjct: 350 I 350
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 56 IGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V G+LK VA+K + DK +F +E + +H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHL 74
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHL---DGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
G + +I+ EY+ NG+L L DGR + + + + + + YL S
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYL---S 127
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRT 228
D +HRD+ A NIL+ L KV+DFG +R+ E+D ++ + K + P+ +
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 229 YQLTEKSDVYSFGVLLVEMMT 249
+ T SDV+S+G+++ E+M+
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS 208
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 126/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K + VAVK + + +K L + +E+ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLISEMEMMKMIGKHK 94
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R GLE + +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
A VA + YL + IHRD+ A N+L+TE K+ DFG AR + HI
Sbjct: 155 CAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDY 205
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVLL E+ T YP P++E
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE-- 260
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R SN E + + D C RPT K+ E L
Sbjct: 261 ----LFKLLKEGH---------RMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 306
Query: 325 WKI 327
+I
Sbjct: 307 DRI 309
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 158
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 219 FTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 56 IGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V G+LK VA+K + DK +F +E + +H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHL 80
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHL---DGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
G + +I+ EY+ NG+L L DGR + + + + + + YL S
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYL---S 133
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRT 228
D +HRD+ A NIL+ L KV+DFG +R+ E+D ++ + K + P+ +
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 229 YQLTEKSDVYSFGVLLVEMMT 249
+ T SDV+S+G+++ E+M+
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 8/226 (3%)
Query: 33 ATTINFSFEEIY-KATENFSPANKIGEGGSG-TVYKGKLKDGSIVAVKRARKNKHDKCLL 90
++ ++ E +Y ++ E + KIGEG G + +DG +K ++
Sbjct: 8 SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER 67
Query: 91 LEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
E + E+ + ++H N+V+ E IV++Y G L + ++ + G + +
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
LD + + AL ++H D I+HRD+K+ NI +T+ ++ DFG AR+ ++ +
Sbjct: 128 LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVEL 181
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ GT YL P+ KSD+++ G +L E+ T ++ E+
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 154
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 153
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 212
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 153
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 151
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 57
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 115
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 168
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
Y+ P+ L+ + +SD++S G+ LVEM GRYPI
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 56 IGEGGSGTVYKGKLKDG----SIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V +G+LK S VA+K K + + EF +E + EH N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIK-TLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G + + +I+ E++ NG L L G + + + + +A + YL S
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYLAEMS--- 136
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG--YLDPDYLRTY 229
+HRD+ A NIL+ L KV+DFG +R EE+S+ ++ + G + P+ +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 230 QLTEKSDVYSFGVLLVEMMT 249
+ T SD +S+G+++ E+M+
Sbjct: 197 KFTSASDAWSYGIVMWEVMS 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 76
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 134
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 135 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 187
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
Y+ P+ L+ + +SD++S G+ LVEM GRYPI S
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G G VY G L D + A K+ + D + +F E + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 113 GF-LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G L ++V+ Y+ +G LR + N + + + + VA + +L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL---ASKK 154
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+HRD+ A N ++ EK KV DFG AR M +++ H T K ++ + L+T +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 231 LTEKSDVYSFGVLLVEMMTGRYP 253
T KSDV+SFGVLL E+MT P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 27/265 (10%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G G G V GK + VA+K ++ + EF E + H LV+L+G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGV 72
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
I+ EY+ NG L +L + + + L++ DV A+ YL + +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 128
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEK 234
RD+ A N L+ ++ KV+DFG +R +D S S K + P+ L + + K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS--SRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 235 SDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASN 293
SD+++FGVL+ E+ + G+ P ER T + + G RL R +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPY-------ERFTNSETAEHIAQG-------LRLYR---PH 229
Query: 294 MAVEKILGLADVCLAPTRQSRPTMK 318
+A EK+ + C RPT K
Sbjct: 230 LASEKVYTIMYSCWHEKADERPTFK 254
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 35/246 (14%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRAR-----KNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G GG G V + +D G VA+K+ R KN+ CL EI K+ H N+
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL------EIQIMKKLNHPNV 75
Query: 109 VKL------FGFLEHGDERIIVVEYVGNGTLREHLDG-RGGNGLELAERLDIAIDVAHAL 161
V L D ++ +EY G LR++L+ GL+ + D++ AL
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 162 TYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTA 218
YLH IIHRD+K NI++ ++L K+ D G+A+ ++ + T+ GT
Sbjct: 136 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ----GELCTEFVGTL 188
Query: 219 GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP-IESKKPIKERVTIRWAMQCLKAGD 277
YL P+ L + T D +SFG L E +TG P + + +P++ +R K+ +
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR-----EKSNE 243
Query: 278 AILVMD 283
I+V D
Sbjct: 244 HIVVYD 249
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKIEH 105
E+F +G+G G VY + + I+A+K K + +K + + + E+ S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+++L+G+ +++EY GT+ L + + ++A+AL+Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCH 129
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +IHRD+K N+L+ K+ DFG++ A S T + GT YL P+
Sbjct: 130 SKR---VIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRTTLCGTLDYLPPEM 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ EK D++S GVL E + G P E+
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 35/246 (14%)
Query: 55 KIGEGGSGTVYKGKLKD-GSIVAVKRAR-----KNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G GG G V + +D G VA+K+ R KN+ CL EI K+ H N+
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL------EIQIMKKLNHPNV 74
Query: 109 VKL------FGFLEHGDERIIVVEYVGNGTLREHLDG-RGGNGLELAERLDIAIDVAHAL 161
V L D ++ +EY G LR++L+ GL+ + D++ AL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 162 TYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTA 218
YLH IIHRD+K NI++ ++L K+ D G+A+ ++ + T+ GT
Sbjct: 135 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ----GELCTEFVGTL 187
Query: 219 GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP-IESKKPIKERVTIRWAMQCLKAGD 277
YL P+ L + T D +SFG L E +TG P + + +P++ +R K+ +
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR-----EKSNE 242
Query: 278 AILVMD 283
I+V D
Sbjct: 243 HIVVYD 248
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E+ K+G G G V+ + VAVK + L N + T ++H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT---LQHDK 238
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
LVKL + + I+ E++ G+L + L G+ L + +D + +A + ++
Sbjct: 239 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ IHRD++A+NIL++ L K+ DFG AR+ + +K TA P+ +
Sbjct: 298 N---YIHRDLRAANILVSASLVCKIADFGLARVGAK--------FPIKWTA----PEAIN 342
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYP 253
T KSDV+SFG+LL+E++T GR P
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 56 IGEGGSGTVYKGKLKDG----SIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V +G+LK S VA+K K + + EF +E + EH N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIK-TLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G + + +I+ E++ NG L L G + + + + +A + YL S
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYLAEMS--- 138
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG--YLDPDYLRTY 229
+HRD+ A NIL+ L KV+DFG +R EE+S+ ++ + G + P+ +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 230 QLTEKSDVYSFGVLLVEMMT 249
+ T SD +S+G+++ E+M+
Sbjct: 199 KFTSASDAWSYGIVMWEVMS 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V+K K +V ARK H LE K N+I+ ++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVM---ARKLIH-----LEIKPAIRNQIIRELQV 60
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L G ++ ++ IA V
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIK 118
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LTYL I+HRDVK SNIL+ + K+ DFG + + ++ + GT
Sbjct: 119 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMANEFVGTRS 171
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
Y+ P+ L+ + +SD++S G+ LVEM GRYP
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDX 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDX 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 45 KATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
+ E F K+GEG G+VYK K+ G IVA+K+ L E EI +
Sbjct: 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQC 81
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+ ++VK +G + IV+EY G G++ + + R E E I L Y
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEY 140
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
LH IHRD+KA NIL+ + AK+ DFG A + A + V GT ++ P
Sbjct: 141 LHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRN---XVIGTPFWMAP 194
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ ++ +D++S G+ +EM G+ P P++
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR 232
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 20/283 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
+++G+G G+V + L D G++VAVK+ + + D+ +F+ EI + +
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFI 86
Query: 109 VKLFGFLEHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
VK G + +G R +V+EY+ +G LR+ L R L+ + L + + + YL
Sbjct: 87 VKYRG-VSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLG 144
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +HRD+ A NIL+ + K+ DFG A++ D + + + P+
Sbjct: 145 SRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPR 285
L + +SDV+SFGV+L E+ T Y +S P E + + + + A +L +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259
Query: 286 LRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCA---EILW 325
+R PA ++ L +C AP+ Q RP+ ++LW
Sbjct: 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
+++G+G G+V + L D G++VAVK+ + + D+ +F+ EI + +
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFI 70
Query: 109 VKLFGFLEHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
VK G + +G R +V+EY+ +G LR+ L R L+ + L + + + YL
Sbjct: 71 VKYRG-VSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLG 128
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +HRD+ A NIL+ + K+ DFG A++ D + + + P+
Sbjct: 129 SRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPR 285
L + +SDV+SFGV+L E+ T Y +S P E + + M C + A+ +
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRM---MGCERDVPALCRLLEL 240
Query: 286 L---RRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCA---EILW 325
L +R PA ++ L +C AP+ Q RP+ ++LW
Sbjct: 241 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 286
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 20/283 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
+++G+G G+V + L D G++VAVK+ + + D+ +F+ EI + +
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFI 73
Query: 109 VKLFGFLEHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
VK G + +G R +V+EY+ +G LR+ L R L+ + L + + + YL
Sbjct: 74 VKYRG-VSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLG 131
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +HRD+ A NIL+ + K+ DFG A++ D + + + P+
Sbjct: 132 SRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPR 285
L + +SDV+SFGV+L E+ T Y +S P E + + + + + A +L +
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGSERDVPALSRLLELLEE 246
Query: 286 LRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCA---EILW 325
+R PA ++ L +C AP+ Q RP+ ++LW
Sbjct: 247 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 289
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
+++G+G G+V + L D G++VAVK+ + + D+ +F+ EI + +
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFI 74
Query: 109 VKLFGFLEHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
VK G + +G R +V+EY+ +G LR+ L R L+ + L + + + YL
Sbjct: 75 VKYRG-VSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLG 132
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +HRD+ A NIL+ + K+ DFG A++ D + + + P+
Sbjct: 133 SRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPR 285
L + +SDV+SFGV+L E+ T Y +S P E + + M C + A+ +
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRM---MGCERDVPALCRLLEL 244
Query: 286 L---RRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCA---EILW 325
L +R PA ++ L +C AP+ Q RP+ ++LW
Sbjct: 245 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 290
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKN-----KHDKCLLLEFKN 95
+I E+F +G+G G V+ + K A+K +K+ +C ++E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
L W EH L +F + + V+EY+ G L H+ + + +L+ A
Sbjct: 72 LSLAW---EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA 126
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
++ L +LH+ I++RD+K NIL+ + K+ DFG M +E+ + +
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNEFC 180
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
GT Y+ P+ L + D +SFGVLL EM+ G+ P +
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 26/224 (11%)
Query: 45 KATENFSPANKIGEGGSGTVYKGKLKDG-SIVAVKRARKNKHDKC-----------LLLE 92
K E++ K+G G G V K K+G S A+K +K++ DK E
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
NEI ++H N++KLF E +V E+ G L E + R + + + +
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAAN 150
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEK---LRAKVTDFGFARMSEEDSAVSH 209
I + + YLH ++ I+HRD+K NIL+ K L K+ DFG + +D +
Sbjct: 151 IMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR- 206
Query: 210 ISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
GTA Y+ P+ L+ + EK DV+S GV++ ++ G YP
Sbjct: 207 ---DRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG-YP 245
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKC-LLLEFKNEILTWSKIEH 105
E+F +G+G G VY + + I+A+K K + +K + + + E+ S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+++L+G+ +++EY GT+ L + + ++A+AL+Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCH 129
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +IHRD+K N+L+ K+ DFG++ A S + GT YL P+
Sbjct: 130 SKR---VIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRDTLCGTLDYLPPEM 181
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ EK D++S GVL E + G P E+
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 88
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 149 CTYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLAR------DINNIDY 199
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 200 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 254
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 255 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 300
Query: 325 WKI 327
+I
Sbjct: 301 DRI 303
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 42/285 (14%)
Query: 50 FSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN 107
F +G G G VYKG+ +K G + A+K ++ E K EI K H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRN 82
Query: 108 LVKLFG-FLEHG-----DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHAL 161
+ +G F++ D+ +V+E+ G G++ + + GN L+ I ++ L
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 162 TYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
++LH + +IHRD+K N+L+TE K+ DFG + ++ D V +T + GT ++
Sbjct: 143 SHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFI-GTPYWM 196
Query: 222 DPDYL-------RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLK 274
P+ + TY KSD++S G+ +EM G P+ P++ A+ +
Sbjct: 197 APEVIACDENPDATYDF--KSDLWSLGITAIEMAEGAPPLCDMHPMR-------ALFLIP 247
Query: 275 AGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK 319
A PRL+ S +K + CL RP ++
Sbjct: 248 RNPA-----PRLK----SKKWSKKFQSFIESCLVKNHSQRPATEQ 283
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 147
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 208 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 258
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 313
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 314 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 359
Query: 325 WKI 327
+I
Sbjct: 360 DRI 362
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 90
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 151 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 201
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 202 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 256
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 257 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 302
Query: 325 WKI 327
+I
Sbjct: 303 DRI 305
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 38 FSFEEIYKATENFSPA---------NKIGEGGSGTVYKGKLKDGS----IVAVKRARKNK 84
F+FE+ +A F+ IG G G V G LK VA+K +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 85 HDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG 144
+K +F +E + +H N++ L G + +I+ E++ NG+L L G
Sbjct: 74 TEK-QRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ- 131
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
+ + + + +A + YL +D +HRD+ A NIL+ L KV+DFG +R E+D
Sbjct: 132 FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 205 SAVSHISTQVKGTAG--YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
++ ++ + G + P+ ++ + T SDV+S+G+++ E+M+
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 49 NFSPANKIGEGGSGTVYKGKL------KDGSIVAVK-------RARKNKHDKCLLLEFKN 95
N ++GEG G V+ + +D +VAVK ARK+ H + LL
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL---- 69
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAE------ 149
+ ++H ++VK +G GD I+V EY+ +G L + L G + + +AE
Sbjct: 70 -----TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124
Query: 150 -----RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L IA +A + YL + +HRD+ N L+ E L K+ DFG +R
Sbjct: 125 LTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR-DVYS 180
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
+ + ++ P+ + + T +SDV+S GV+L E+ T G+ P
Sbjct: 181 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE ++ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLAR------DINNIDY 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 93
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 154 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 204
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 205 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 259
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 260 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 305
Query: 325 WKI 327
+I
Sbjct: 306 DRI 308
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 34/295 (11%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 76
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAIDVAHA 160
VK G R +++EY+ G+LR++L AER+D +
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH-------AERIDHIKLLQYTSQICKG 129
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
+ YL T IHRD+ NIL+ + R K+ DFG ++ +D + + +
Sbjct: 130 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAIL 280
P+ L + + SDV+SFGV+L E+ T Y +SK P E + + + K G I+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIV 241
Query: 281 VMDPRLR----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
L R P + ++I + C RP+ + A + +IR +
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 9/198 (4%)
Query: 56 IGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V G+LK VA+K + +K +F E + +H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIHL 88
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G + +IV EY+ NG+L L G + + + + ++ + YL SD
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYL---SDMG 144
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+HRD+ A NILI L KV+DFG +R+ E+D ++ + K + P+ + +
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 232 TEKSDVYSFGVLLVEMMT 249
T SDV+S+G+++ E+++
Sbjct: 205 TSASDVWSYGIVMWEVVS 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + ++ L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 46/249 (18%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTL--------REHLDGRGGNGLELAERLDIAI 155
+H N+V L G HG +++ EY G L LD G LEL + L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
VA + +L + + IHRDV A N+L+T AK+ DFG AR DS + VK
Sbjct: 168 QVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS-----NYIVK 219
Query: 216 GTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYP--IESKKPIKERVTI 266
G A ++ P+ + T +SDV+S+G+LL E+ + YP + + K K
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK----- 274
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK-CAEILW 325
LV D PA A + I + C A RPT ++ C+ +
Sbjct: 275 -------------LVKDGYQMAQPA--FAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
Query: 326 KIRKDFREK 334
+ ++D RE+
Sbjct: 320 QAQEDRRER 328
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E + KIGEG G V+K + +D G IVA+K+ +++ D + EI +++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
NLV L +V EY + L E LD R G+ I A+ + H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHE-LD-RYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++ IHRDVK NILIT+ K+ DFGFAR+ + S T Y P+ L
Sbjct: 121 HN---CIHRDVKPENILITKHSVIKLCDFGFARLL---TGPSDYYDDEVATRWYRSPELL 174
Query: 227 R-TYQLTEKSDVYSFGVLLVEMMTG 250
Q DV++ G + E+++G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++VEY G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR + + + +
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR---DINNIDYYKN 215
Query: 213 QVKG--TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVTIR 267
G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE----- 267
Query: 268 WAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKI 327
+ LK G R +N E + + D C RPT K+ E L +I
Sbjct: 268 -LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 97/221 (43%), Gaps = 44/221 (19%)
Query: 56 IGEGGSGTVYKGKLKDGSI---VAVKR----ARKNKHDKCLLLEFKNEILTWSKI-EHLN 107
IGEG G V K ++K + A+KR A K+ H +F E+ K+ H N
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR-----DFAGELEVLCKLGHHPN 77
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL--------------DGRGGNGLELAERLDI 153
++ L G EH + +EY +G L + L + L + L
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
A DVA + YL S IHRD+ A NIL+ E AK+ DFG +R E
Sbjct: 138 AADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE---------VY 185
Query: 214 VKGTAGYLDPDYLRTYQL-----TEKSDVYSFGVLLVEMMT 249
VK T G L ++ L T SDV+S+GVLL E+++
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKN-----KHDKCLLLEFKN 95
+I E+F +G+G G V+ + K A+K +K+ +C ++E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
L W EH L +F + + V+EY+ G L H+ + + +L+ A
Sbjct: 71 LSLAW---EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA 125
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
++ L +LH+ I++RD+K NIL+ + K+ DFG M +E+ +
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGDAKTNXFC 179
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
GT Y+ P+ L + D +SFGVLL EM+ G+ P +
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L++ H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 97/221 (43%), Gaps = 44/221 (19%)
Query: 56 IGEGGSGTVYKGKLKDGSI---VAVKR----ARKNKHDKCLLLEFKNEILTWSKI-EHLN 107
IGEG G V K ++K + A+KR A K+ H +F E+ K+ H N
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR-----DFAGELEVLCKLGHHPN 87
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL--------------DGRGGNGLELAERLDI 153
++ L G EH + +EY +G L + L + L + L
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
A DVA + YL S IHRD+ A NIL+ E AK+ DFG +R E
Sbjct: 148 AADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE---------VY 195
Query: 214 VKGTAGYLDPDYLRTYQL-----TEKSDVYSFGVLLVEMMT 249
VK T G L ++ L T SDV+S+GVLL E+++
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 48 ENFSPANKIGEGGSGTVYKG-----KLKDG-SIVAVKRARKNKHDKCLLLEFKNEILTWS 101
+N +GEG G V K K + G + VAVK ++N L + +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLK 81
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLR----------------------EHLDG 139
++ H +++KL+G +++VEY G+LR LD
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 140 RGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR 199
L + + + A ++ + YL S ++HRD+ A NIL+ E + K++DFG +R
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 200 -MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ EEDS V +Q + ++ + L + T +SDV+SFGVLL E++T
Sbjct: 199 DVYEEDSXVKR--SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 55 KIGEGGSGTVYKGKL------KDGSIVAVKRARKNKHDKCLLL--EFKNEILTWSKIEHL 106
++GEG G V+ + KD +VAVK + D L +F+ E + ++H
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK----DPTLAARKDFQREAELLTNLQHE 77
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG--------------LELAERLD 152
++VK +G GD I+V EY+ +G L + L G + L L++ L
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
IA +A + YL + +HRD+ N L+ L K+ DFG +R + +
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR-DVYSTDYYRVGG 193
Query: 213 QVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
++ P+ + + T +SDV+SFGV+L E+ T G+ P
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
++ F K+G G TVYKG K G VA+K + + + + EI +++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELK 61
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRG-GN---GLELAERLDIAIDVAHA 160
H N+V+L+ + ++ +V E++ N L++++D R GN GLEL +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
L + H + I+HRD+K N+LI ++ + K+ DFG AR V+ S++V T Y
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVV-TLWY 174
Query: 221 LDPDYL---RTYQLTEKSDVYSFGVLLVEMMTGR 251
PD L RTY + D++S G +L EM+TG+
Sbjct: 175 RAPDVLMGSRTY--STSIDIWSCGCILAEMITGK 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 182
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 80
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 140 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 251
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 252 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR T T Y P+
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPE 174
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 182
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 78
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 138 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 249
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 250 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++V Y G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 55 KIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNIV 77
Query: 110 KLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
K G R +++E++ G+LRE+L + ++ + L + + YL T
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 137 R---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLR 287
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIELL 248
Query: 288 ----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 249 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 79
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 139 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 250
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 251 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 39/314 (12%)
Query: 33 ATTINFSFEEIY-KATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLL 90
++ ++ E +Y ++ E + +GEG G V K + KD G IVA+K+ ++ DK +
Sbjct: 9 SSGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK 68
Query: 91 LEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
EI ++ H NLV L + +V E+V + T+ + L+ NGL+
Sbjct: 69 KIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLE-LFPNGLDYQVV 126
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
+ + + + H+++ IIHRD+K NIL+++ K+ DFGFAR +A +
Sbjct: 127 QKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL---AAPGEV 180
Query: 211 STQVKGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWA 269
T Y P+ L + + DV++ G L+ EM G I + I
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI--- 237
Query: 270 MQCLK----------------AG---DAILVMDPRLRRTPASNMAVEKILGLADVCLAPT 310
M CL AG I +P RR P + E ++ LA CL
Sbjct: 238 MMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS---EVVIDLAKKCLHID 294
Query: 311 RQSRPTMKKCAEIL 324
RP CAE+L
Sbjct: 295 PDKRPF---CAELL 305
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 179
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 73
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 133 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 244
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E+V + L+ +D G+ L + L + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 104
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 164 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 275
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIR 328
R P + ++I + C RP+ + A + +IR
Sbjct: 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 73
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 133 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 244
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 71
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 131 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 242
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIR 328
R P + ++I + C RP+ + A + +IR
Sbjct: 243 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 76
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 136 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 247
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 72
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 132 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 243
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 244 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R + L+LA + A ++ AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STXXKASKGKLPIKWMAPESIN 185
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 73
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 133 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 244
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
R P + ++I + C RP+ + A + +IR +
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 55 KIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNIV 92
Query: 110 KLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
K G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 152 R---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLR 287
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIELL 263
Query: 288 ----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 264 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E+V + L++ +D G+ L + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 176
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 54 NKIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNI 77
Query: 109 VKLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
VK G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 137 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRL 286
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIEL 248
Query: 287 R----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 249 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKN-EILTWSKI 103
+ ++F +G G G V+ + + +G A+K +K + +E N E L S +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H +++++G + + ++++Y+ G L L R A +V AL Y
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVCLALEY 121
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
LH+ II+RD+K NIL+ + K+TDFGFA+ V ++ + GT Y+ P
Sbjct: 122 LHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY------VPDVTYXLCGTPDYIAP 172
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ + T + D +SFG+L+ EM+ G P +K
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 55 KIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNIV 92
Query: 110 KLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
K G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
IHRD+ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 152 R---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLR 287
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIELL 263
Query: 288 ----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 264 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 49 NFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
+F IG GG G V+K K + DG +KR + N + + E+ +K++H+N
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLDHVN 65
Query: 108 LVKLFGFLEHGDER----------------IIVVEYVGNGTLREHLDGRGGNGLELAERL 151
+V G + D I +E+ GTL + ++ R G L+ L
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
++ + + Y+H+ +I+RD+K SNI + + + K+ DFG + D
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK----R 178
Query: 212 TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
+ KGT Y+ P+ + + ++ D+Y+ G++L E++
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 137
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 190
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKN---KHDKCLLLEFKNEILTWS 101
+NF +G+G G V ++K+ G + AVK +K+ + D + IL+ +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHAL 161
+ H L +LF + D V+E+V G L H+ + + A A ++ AL
Sbjct: 81 R-NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISAL 137
Query: 162 TYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
+LH D II+RD+K N+L+ + K+ DFG M +E + GT Y+
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFG---MCKEGICNGVTTATFCGTPDYI 191
Query: 222 DPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKK 258
P+ L+ D ++ GVLL EM+ G P E++
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 56 IGEGGSGTVY--------KGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHL 106
+GEG G V K K K+ VAVK + + +K L + +E+ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHK 101
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA--------------ERLD 152
N++ L G ++V Y G LRE+L R G+E + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+A + YL + IHRD+ A N+L+TE K+ DFG AR +++I
Sbjct: 162 CTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 212
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
K T G ++ P+ L T +SDV+SFGVL+ E+ T YP P++E
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE-- 267
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
+ LK G R +N E + + D C RPT K+ E L
Sbjct: 268 ----LFKLLKEGH---------RMDKPANCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 313
Query: 325 WKI 327
+I
Sbjct: 314 DRI 316
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E + KIGEG G VYK + G A+K+ R K D+ + EI +++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKL+ + H +R+++V + L++ LD G GLE + + + + Y H
Sbjct: 62 IVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCH-- 117
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
D ++HRD+K N+LI + K+ DFG AR V + +V T Y PD L
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTG 250
+ + + D++S G + EM+ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E + KIGEG G VYK + G A+K+ R K D+ + EI +++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKL+ + H +R+++V + L++ LD G GLE + + + + Y H
Sbjct: 62 IVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCH-- 117
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
D ++HRD+K N+LI + K+ DFG AR V + +V T Y PD L
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTG 250
+ + + D++S G + EM+ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 160
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 213
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 46 ATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
AT + P +IG G GTVYK + G VA+K R ++ L + E+ ++E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 105 ---HLNLVKLFGFL--EHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAID 156
H N+V+L D I +V E+V + LR +LD GL D+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
L +LH I+HRD+K NIL+T K+ DFG AR+ A++ +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV---- 173
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ L D++S G + EM
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 134
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 187
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 43/230 (18%)
Query: 49 NFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
+F IG GG G V+K K + DG ++R + N + + E+ +K++H+N
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE------KAEREVKALAKLDHVN 66
Query: 108 LVKLFGF--------------LEHGDER---------------IIVVEYVGNGTLREHLD 138
+V G LE D I +E+ GTL + ++
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 139 GRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFA 198
R G L+ L++ + + Y+H+ +IHRD+K SNI + + + K+ DFG
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 199 RMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
+ D T+ KGT Y+ P+ + + ++ D+Y+ G++L E++
Sbjct: 184 TSLKNDGK----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 135
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 188
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 120 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 173
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 101/238 (42%), Gaps = 45/238 (18%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTL--------REHLDGRGGNGLELAERLDIAI 155
+H N+V L G HG +++ EY G L LD G LEL + L +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
VA + +L + + IHRDV A N+L+T AK+ DFG AR DS + VK
Sbjct: 160 QVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS-----NYIVK 211
Query: 216 GTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYP--IESKKPIKERVTI 266
G A ++ P+ + T +SDV+S+G+LL E+ + YP + + K K
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK----- 266
Query: 267 RWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEIL 324
LV D PA A + I + C A RPT ++ L
Sbjct: 267 -------------LVKDGYQMAQPA--FAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 185
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 175
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 129
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 182
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 176
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 176
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 175
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERL 151
F E+ +EH N++K G L + D+R+ + EY+ GTLR + ++R+
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVL-YKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRV 111
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHI 210
A D+A + YLH+ + IIHRD+ + N L+ E V DFG AR M +E + +
Sbjct: 112 SFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 211 ST----------QVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
+ V G ++ P+ + EK DV+SFG++L E++
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R L+LA + A ++ AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 185
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 35/231 (15%)
Query: 48 ENFSPANKIGEGGSGTVYKG-----KLKDG-SIVAVKRARKNKHDKCLLLEFKNEILTWS 101
+N +GEG G V K K + G + VAVK ++N L + +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLK 81
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLR----------------------EHLDG 139
++ H +++KL+G +++VEY G+LR LD
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 140 RGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR 199
L + + + A ++ + YL ++ ++HRD+ A NIL+ E + K++DFG +R
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 200 -MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ EEDS V +Q + ++ + L + T +SDV+SFGVLL E++T
Sbjct: 199 DVYEEDSXVKR--SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 173
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 173
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 175
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 176
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 124 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 177
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 122 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 175
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 174
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E + KIGEG G VYK + G A+K+ R K D+ + EI +++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKL+ + H +R+++V + L++ LD G GLE + + + + Y H
Sbjct: 62 IVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCH-- 117
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
D ++HRD+K N+LI + K+ DFG AR V + ++ T Y PD L
Sbjct: 118 -DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIV-TLWYRAPDVLM 173
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTG 250
+ + + D++S G + EM+ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 173
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 173
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR V +V T Y P+ L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPEIL 174
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 97/221 (43%), Gaps = 44/221 (19%)
Query: 56 IGEGGSGTVYKGKLKDGSI---VAVKR----ARKNKHDKCLLLEFKNEILTWSKI-EHLN 107
IGEG G V K ++K + A+KR A K+ H +F E+ K+ H N
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR-----DFAGELEVLCKLGHHPN 84
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL--------------DGRGGNGLELAERLDI 153
++ L G EH + +EY +G L + L + L + L
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
A DVA + YL S IHR++ A NIL+ E AK+ DFG +R E
Sbjct: 145 AADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE---------VY 192
Query: 214 VKGTAGYLDPDYLRTYQL-----TEKSDVYSFGVLLVEMMT 249
VK T G L ++ L T SDV+S+GVLL E+++
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R + L+LA + A ++ AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 132
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 185
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 123 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 176
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 121 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 174
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR V +V T Y P+ L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPEIL 174
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR V +V T Y P+ L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPEIL 176
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 35/231 (15%)
Query: 48 ENFSPANKIGEGGSGTVYKG-----KLKDG-SIVAVKRARKNKHDKCLLLEFKNEILTWS 101
+N +GEG G V K K + G + VAVK ++N L + +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLK 81
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLR----------------------EHLDG 139
++ H +++KL+G +++VEY G+LR LD
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 140 RGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR 199
L + + + A ++ + YL ++ ++HRD+ A NIL+ E + K++DFG +R
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 200 -MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ EEDS V +Q + ++ + L + T +SDV+SFGVLL E++T
Sbjct: 199 DVYEEDSYVKR--SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 46 ATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
AT + P +IG G GTVYK + G VA+K R ++ L + E+ ++E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 105 ---HLNLVKLFGFL--EHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAID 156
H N+V+L D I +V E+V + LR +LD GL D+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
L +LH I+HRD+K NIL+T K+ DFG AR+ A+ +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV---- 173
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ L D++S G + EM
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGK-LKDGS-IVAVKRARKNKHDKCLLLEFKNEILTW 100
+ +A + + +IGEG G V+K + LK+G VA+KR R ++ + L E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 101 SKIE---HLNLVKLFGFL-----EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
+E H N+V+LF + + +V E+V + L +LD G+ D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ + L +LH++ ++HRD+K NIL+T + K+ DFG AR+ A+ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL----T 177
Query: 213 QVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
V T Y P+ L D++S G + EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 21/220 (9%)
Query: 48 ENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E F+ +IG+G G V+KG + +VA+K + + + + EI S+ +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSS 81
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+ K +G G + I++EY+G G+ + L + ++A L ++ L YLH+
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHS 138
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-----GTAGYL 221
IHRD+KA+N+L++E+ K+ DFG A + TQ+K GT ++
Sbjct: 139 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--------TQIKRNTFVGTPFWM 187
Query: 222 DPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ ++ K+D++S G+ +E+ G P P++
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGK-LKDGS-IVAVKRARKNKHDKCLLLEFKNEILTW 100
+ +A + + +IGEG G V+K + LK+G VA+KR R ++ + L E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 101 SKIE---HLNLVKLFGFL-----EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
+E H N+V+LF + + +V E+V + L +LD G+ D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ + L +LH++ ++HRD+K NIL+T + K+ DFG AR+ A+ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL----T 177
Query: 213 QVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
V T Y P+ L D++S G + EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L+ +D G+ L + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 176
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
+ ENF KIGEG G VYK + K G +VA+K+ R + + + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL + ++ +V E++ + L++ +D G+ L + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H++ ++HRD+K N+LI + K+ DFG AR V +V T Y P+
Sbjct: 121 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAPE 174
Query: 225 YLRTYQLTEKS-DVYSFGVLLVEMMTGR 251
L + + D++S G + EM+T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R + L+LA + A ++ AL YL +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 512
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 565
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 89
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTA-EIVSALE 146
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + ++ V GTA Y+
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVS 202
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L ++ SD+++ G ++ +++ G P +
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGK-LKDGS-IVAVKRARKNKHDKCLLLEFKNEILTW 100
+ +A + + +IGEG G V+K + LK+G VA+KR R ++ + L E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 101 SKIE---HLNLVKLFGFL-----EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
+E H N+V+LF + + +V E+V + L +LD G+ D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ + L +LH++ ++HRD+K NIL+T + K+ DFG AR+ A+ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL----T 177
Query: 213 QVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
V T Y P+ L D++S G + EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERII--VVEYVGNGTLREHLDGRGGNGLELAER 150
+K EI + H +++K G E E+ + V+EYV G+LR++L + + LA+
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQL 119
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
L A + + YLH+ IHR++ A N+L+ K+ DFG A+ E +
Sbjct: 120 LLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAM 270
+ P+ L+ Y+ SDV+SFGV L E++T + S+ P + + +
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT--HCDSSQSPPTKFLELIGIA 234
Query: 271 QCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
Q + + R R P + ++ L C RPT + IL + +
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
Query: 331 FR 332
+R
Sbjct: 295 YR 296
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 19/225 (8%)
Query: 33 ATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKC--- 88
T N + I K TE +G G GTVYKG + +G V + A K ++
Sbjct: 24 GTAPNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK 82
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNG 144
+EF +E L + ++H +LV+L G ++ V + + +G L EH D G
Sbjct: 83 ANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQL 141
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L+ + +A + YL ++HRD+ A N+L+ K+TDFG AR+ E D
Sbjct: 142 L-----LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ + K ++ + + + T +SDV+S+GV + E+MT
Sbjct: 194 EK-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+ + R + + + EI ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
ENF KIGEG G VYK + K G +VA+ + R + + + EI ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+VKL + ++ +V E++ + L++ +D G+ L + L + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+LI + K+ DFG AR T T Y P+ L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 227 RTYQLTEKS-DVYSFGVLLVEMMTGR 251
+ + D++S G + EM+T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 46 ATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE 104
AT + P +IG G GTVYK + G VA+K R ++ L + E+ ++E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 105 ---HLNLVKLFGFL--EHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDIAID 156
H N+V+L D I +V E+V + LR +LD GL D+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
L +LH I+HRD+K NIL+T K+ DFG AR+ A+ +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV---- 173
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ L D++S G + EM
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 45 KATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTW 100
K E+F +GEG TV + L A+K K K +K + + +++
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM-- 64
Query: 101 SKIEHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
S+++H VKL+ F DE++ + Y NG L +++ + G+ E R A ++
Sbjct: 65 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVS 121
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
AL YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 177
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
Y+ P+ L + SD+++ G ++ +++ G P +
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 55 KIGEGGSGTVYKGK---LKD--GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
++G+G G+V + L+D G +VAVK+ + + + L +F+ EI ++H N+V
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDNIV 75
Query: 110 KLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
K G R +++EY+ G+LR++L + ++ + L + + YL T
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
IHR++ NIL+ + R K+ DFG ++ +D + + + P+ L
Sbjct: 135 R---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLR 287
+ + SDV+SFGV+L E+ T Y +SK P E + + + K G I+ L
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRM---IGNDKQGQMIVFHLIELL 246
Query: 288 ----RTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDF 331
R P + ++I + C RP+ + A + +IR +
Sbjct: 247 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 45 KATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTW 100
K E+F +GEG TV + L A+K K K +K + + +++
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM-- 63
Query: 101 SKIEHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
S+++H VKL+ F DE++ + Y NG L +++ + G+ E R A ++
Sbjct: 64 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVS 120
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
AL YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 176
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
Y+ P+ L + SD+++ G ++ +++ G P +
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 56 IGEGGSGTVYKG---KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IGEG G V++G ++ ++ + KN + +F E LT + +H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + I++E G LR L R + L+LA + A ++ AL YL +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR---F 512
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG-----YLDPDYLR 227
+HRD+ A N+L++ K+ DFG +R E+ ST K + G ++ P+ +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMED-------STYYKASKGKLPIKWMAPESIN 565
Query: 228 TYQLTEKSDVYSFGVLLVE-MMTGRYPIESKK 258
+ T SDV+ FGV + E +M G P + K
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 19/257 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
K+G G G V+ + + + V + + + + + EI ++H N++K+F
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL--DIAIDVAHALTYLHTYSDPPI 172
E IV+E G L E + G L+E ++ + +AL Y H+ +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---V 145
Query: 173 IHRDVKASNILITEK---LRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+H+D+K NIL + K+ DFG A + + D ST GTA Y+ P+ +
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH----STNAAGTALYMAPEVFKR- 200
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPI--ESKKPIKERVTIR---WAMQCLK-AGDAILVMD 283
+T K D++S GV++ ++TG P S + ++++ T + +A++C A+ ++
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK 260
Query: 284 PRLRRTPASNMAVEKIL 300
L + P + ++L
Sbjct: 261 QMLTKDPERRPSAAQVL 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 45 KATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTW 100
K E+F +GEG TV + L A+K K K +K + + +++
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM-- 61
Query: 101 SKIEHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
S+++H VKL+ F DE++ + Y NG L +++ + G+ E R A ++
Sbjct: 62 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVS 118
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
AL YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 174
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
Y+ P+ L + SD+++ G ++ +++ G P +
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 45 KATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTW 100
K E+F +GEG TV + L A+K K K +K + + +++
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM-- 62
Query: 101 SKIEHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
S+++H VKL+ F DE++ + Y NG L +++ + G+ E R A ++
Sbjct: 63 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVS 119
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
AL YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 175
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
Y+ P+ L + SD+++ G ++ +++ G P +
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 19/225 (8%)
Query: 33 ATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKC--- 88
T N + I K TE +G G GTVYKG + +G V + A K ++
Sbjct: 1 GTAPNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK 59
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNG 144
+EF +E L + ++H +LV+L G ++ V + + +G L EH D G
Sbjct: 60 ANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQL 118
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L+ + +A + YL ++HRD+ A N+L+ K+TDFG AR+ E D
Sbjct: 119 L-----LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ + K ++ + + + T +SDV+S+GV + E+MT
Sbjct: 171 EK-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 10/242 (4%)
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERII--VVEYVGNGTLREHLDGRGGNGLELAER 150
+K EI + H +++K G E E+ + V+EYV G+LR++L + + LA+
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQL 119
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
L A + + YLH IHR++ A N+L+ K+ DFG A+ E +
Sbjct: 120 LLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAM 270
+ P+ L+ Y+ SDV+SFGV L E++T + S+ P + + +
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT--HCDSSQSPPTKFLELIGIA 234
Query: 271 QCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKD 330
Q + + R R P + ++ L C RPT + IL + +
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
Query: 331 FR 332
+R
Sbjct: 295 YR 296
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGG-SGTVYKGKLKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG S TV +L A+K K K +K + + +++ S++
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 87
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 144
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 200
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 56 IGEGGSGTVYKGKLKDGS----IVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
IG G G V G LK VA+K + +K +F +E + +H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVIHL 73
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G + +I+ E++ NG+L L G + + + + +A + YL +D
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG--YLDPDYLRTY 229
+HR + A NIL+ L KV+DFG +R E+D++ ++ + G + P+ ++
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 230 QLTEKSDVYSFGVLLVEMMT 249
+ T SDV+S+G+++ E+M+
Sbjct: 190 KFTSASDVWSYGIVMWEVMS 209
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 90
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 91 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 147
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + ++ V GTA Y+
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVS 203
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 44 YKATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRAR-------KNKHDKCLLLEFKN 95
Y NF KIG G VY+ L DG VA+K+ + K + D C+
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CI-----K 81
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER--LDI 153
EI ++ H N++K + +E IV+E G L + + ER
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
+ + AL ++H+ ++HRD+K +N+ IT K+ D G R + +H
Sbjct: 142 FVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH---S 195
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCL 273
+ GT Y+ P+ + KSD++S G LL EM + P K M
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----------MNLY 244
Query: 274 KAGDAILVMD-PRLRRTPASNMAVEKILGLADVCLAPTRQSRP 315
I D P L S+ E++ L ++C+ P + RP
Sbjct: 245 SLCKKIEQCDYPPL----PSDHYSEELRQLVNMCINPDPEKRP 283
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 55 KIGEGGSGTVYKGKLKDG-SIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG GTV+K K ++ IVA+KR R + D+ + EI +++H N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
L H D+++ +V + L+++ D G+ L+ + L + H+ + ++
Sbjct: 69 VL-HSDKKLTLVFEFCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTE 233
HRD+K N+LI K+ DFG AR V S +V T Y PD L +L
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 234 KS-DVYSFGVLLVEMMTGRYPI 254
S D++S G + E+ P+
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 94
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 95 DHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 151
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 207
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 87
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 144
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYVS 200
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 86
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 87 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 143
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + ++ V GTA Y+
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVS 199
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 55 KIGEGGSGTVYKGKL-KDGSIVAVKRARK--NKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G G V+K + K G ++AVK+ R+ NK + +L + +L ++ V+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI--VQC 89
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL--DIAIDVAHALTYLHTYSD 169
FG + I +E +G T E L R + ER+ + + + AL YL
Sbjct: 90 FGTFITNTDVFIAMELMG--TCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHG 145
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRDVK SNIL+ E+ + K+ DFG + +D A + G A Y+ P+ +
Sbjct: 146 --VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA----KDRSAGCAAYMAPERIDPP 199
Query: 230 QLTE-----KSDVYSFGVLLVEMMTGRYPIESKK 258
T+ ++DV+S G+ LVE+ TG++P ++ K
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 48 ENFSPANKIGEGGSGTVYKGK----LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
E ++ +G+G G V K K ++ ++ + +A D +L E+ K+
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL---REVELLKKL 78
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N++KLF LE IV E G L + + R A R I V +TY
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITY 136
Query: 164 LHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
+H ++ I+HRD+K NIL+ K + K+ DFG + ++++ + GTA Y
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK----DRIGTAYY 189
Query: 221 LDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ P+ LR TY EK DV+S GV+L +++G P K
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLSGTPPFYGK 225
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 89
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 146
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 202
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 87
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 144
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 200
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 90
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 91 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 147
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 203
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 89
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 146
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 202
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 48 ENFSPANKIGEGGSGTVYKGK----LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
E ++ +G+G G V K K ++ ++ + +A D +L E+ K+
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL---REVELLKKL 78
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N++KLF LE IV E G L + + R A R I V +TY
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITY 136
Query: 164 LHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
+H ++ I+HRD+K NIL+ K + K+ DFG + ++++ + GTA Y
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK----DRIGTAYY 189
Query: 221 LDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ P+ LR TY EK DV+S GV+L +++G P K
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLSGTPPFYGK 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 89
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 146
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 202
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG +G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 92
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 93 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 149
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 150 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 205
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 55 KIGEGGSGTVYKGKL------KDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++GEG G V+ + +D +VAVK ++ + + E+LT ++H ++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT--MLQHQHI 82
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-------------LELAERLDIAI 155
V+ FG G ++V EY+ +G L L G + L L + L +A
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
VA + YL +HRD+ N L+ + L K+ DFG +R + + +
Sbjct: 143 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR-DIYSTDYYRVGGRTM 198
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
++ P+ + + T +SDV+SFGV+L E+ T G+ P
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 89
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 146
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 202
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 87
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 144
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 200
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 55 KIGEGGSGTVYKGKL------KDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++GEG G V+ + +D +VAVK ++ + + E+LT ++H ++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT--MLQHQHI 76
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-------------LELAERLDIAI 155
V+ FG G ++V EY+ +G L L G + L L + L +A
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
VA + YL +HRD+ N L+ + L K+ DFG +R + + +
Sbjct: 137 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR-DIYSTDYYRVGGRTM 192
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
++ P+ + + T +SDV+SFGV+L E+ T G+ P
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK----NEILTWSKI 103
++F +++G G G V K + + ++ ARK H LE K N+I+ ++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIM---ARKLIH-----LEIKPAIRNQIIRELQV 67
Query: 104 EH----LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
H +V +G E I +E++ G+L + L E+ ++ IA V
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLR 125
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
L YL I+HRDVK SNIL+ + K+ DFG + + ++ GT
Sbjct: 126 GLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRS 178
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
Y+ P+ L+ + +SD++S G+ LVE+ GRYPI
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 89
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 146
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 202
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 71
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 72 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 128
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 184
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 25/274 (9%)
Query: 34 TTINFSFEEIYKATENFSPANKIGEGGSGTVYKGK----LKDGSIVAVKRARK-----NK 84
T++N E+I E F +G+GG G V++ + G I A+K +K N
Sbjct: 5 TSVNRGPEKI--RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA 62
Query: 85 HDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG 144
D K E +++H +V L + G + +++EY+ G L L+ R G
Sbjct: 63 KDTA---HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIF 118
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
+E +A +++ AL +LH II+RD+K NI++ + K+TDFG + S D
Sbjct: 119 MEDTACFYLA-EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI---ESKKPIK 261
V+H GT Y+ P+ L D +S G L+ +M+TG P KK I
Sbjct: 175 GTVTHTFC---GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 262 ERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMA 295
+ + + + +A ++ L+R AS +
Sbjct: 232 KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLG 265
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E + K+GEG G VYK K G IVA+KR R + D+ + EI ++ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+V L + H + + +V L++ LD GL+ ++ + + + H +
Sbjct: 81 IVSLIDVI-HSERCLTLVFEFMEKDLKKVLD-ENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+K N+LI K+ DFG AR V + +V T Y PD L
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVV-TLWYRAPDVLM 192
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + + D++S G + EM+TG+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 48 ENFSPANKIGEGGSGTVYKGK----LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
E ++ +G+G G V K K ++ ++ + +A D +L E+ K+
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL---REVELLKKL 78
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N++KLF LE IV E G L + + R A R I V +TY
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITY 136
Query: 164 LHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
+H ++ I+HRD+K NIL+ K + K+ DFG + ++++ + GTA Y
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK----DRIGTAYY 189
Query: 221 LDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ P+ LR TY EK DV+S GV+L +++G P K
Sbjct: 190 IAPEVLRGTYD--EKCDVWSAGVILYILLSGTPPFYGK 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E + K+GEG G VYK K G IVA+KR R + D+ + EI ++ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+V L + H + + +V L++ LD GL+ ++ + + + H +
Sbjct: 81 IVSLIDVI-HSERCLTLVFEFMEKDLKKVLD-ENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+K N+LI K+ DFG AR V + +V T Y PD L
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVV-TLWYRAPDVLM 192
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + + D++S G + EM+TG+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 55 KIGEGGSGTVYKGKL------KDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++GEG G V+ + +D +VAVK ++ + + E+LT ++H ++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT--MLQHQHI 105
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG-------------LELAERLDIAI 155
V+ FG G ++V EY+ +G L L G + L L + L +A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
VA + YL +HRD+ N L+ + L K+ DFG +R + + +
Sbjct: 166 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR-DIYSTDYYRVGGRTM 221
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYP 253
++ P+ + + T +SDV+SFGV+L E+ T G+ P
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKN---KHDKCLLLEFKNEILTWSKI 103
E+F +GEG TV + L A+K K K +K + + +++ S++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM--SRL 86
Query: 104 EHLNLVKLFGFLEHGDERIIV-VEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H VKL+ F DE++ + Y NG L +++ + G+ E R A ++ AL
Sbjct: 87 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALE 143
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YLH IIHRD+K NIL+ E + ++TDFG A++ +S + + V GTA Y+
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVS 199
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L + SD+++ G ++ +++ G P +
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 25/274 (9%)
Query: 34 TTINFSFEEIYKATENFSPANKIGEGGSGTVYKGK----LKDGSIVAVKRARK-----NK 84
T++N E+I E F +G+GG G V++ + G I A+K +K N
Sbjct: 5 TSVNRGPEKI--RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA 62
Query: 85 HDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNG 144
D K E +++H +V L + G + +++EY+ G L L+ R G
Sbjct: 63 KDTA---HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIF 118
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
+E +A +++ AL +LH II+RD+K NI++ + K+TDFG + S D
Sbjct: 119 MEDTACFYLA-EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI---ESKKPIK 261
V+H GT Y+ P+ L D +S G L+ +M+TG P KK I
Sbjct: 175 GTVTHXFC---GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 262 ERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMA 295
+ + + + +A ++ L+R AS +
Sbjct: 232 KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLG 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMXGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 17/266 (6%)
Query: 72 GSIVAVKRARKN---KHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERII--VVE 126
G +VAVK + + +H +K EI + H +++K G E + V+E
Sbjct: 60 GEMVAVKALKADAGPQHRS----GWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 127 YVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITE 186
YV G+LR++L + + LA+ L A + + YLH IHRD+ A N+L+
Sbjct: 116 YVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDN 169
Query: 187 KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVE 246
K+ DFG A+ E + + P+ L+ Y+ SDV+SFGV L E
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 247 MMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVC 306
++T + S+ P + + + Q + + R R P + ++ L C
Sbjct: 230 LLT--HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNC 287
Query: 307 LAPTRQSRPTMKKCAEILWKIRKDFR 332
RPT + IL + + ++
Sbjct: 288 WETEASFRPTFENLIPILKTVHEKYQ 313
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILT 99
+N + +G G G VY+G++ D S VAVK + ++ D+ L+F E L
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALI 101
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIA 154
SK+ H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIS 211
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAS 212
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKER 263
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 272
Query: 264 VT 265
VT
Sbjct: 273 VT 274
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFK- 94
N I+K TE +G G GTV+KG + +G + + K DK F+
Sbjct: 21 NKVLARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 79
Query: 95 --NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-DGRGGNGLELAERL 151
+ +L ++H ++V+L G G +V +Y+ G+L +H+ RG G +L L
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL--L 136
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+ + +A + YL + ++HR++ A N+L+ + +V DFG A + D +
Sbjct: 137 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-QLLY 192
Query: 212 TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
++ K ++ + + + T +SDV+S+GV + E+MT
Sbjct: 193 SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINAMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSIVAVKRARKNKHDKCLL---LEFKNEILTW 100
+N + +G G G VY+G++ D S + V A K + C L+F E L
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV--AVKTLPEVCSEQDELDFLMEALII 88
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAI 155
SK+ H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIST 212
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASY 199
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E V
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Query: 265 T 265
T
Sbjct: 260 T 260
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMXGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 90 LLEFKNEILTWSKIEHLNLVKLFGFL-EHGDERI-IVVEYVGNGTLREHLDGRGGNGLEL 147
+ + K EI + H N+VK G E G I +++E++ +G+L+E+L + N + L
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINL 125
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
++L A+ + + YL + +HRD+ A N+L+ + + K+ DFG + E D
Sbjct: 126 KQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 208 SHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ + P+ L + SDV+SFGV L E++T
Sbjct: 183 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMXGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLL 91
F +E + E + ++G+G G VY+G +D + VAVK ++ + +
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERI 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGN 143
EF NE ++V+L G + G ++V+E + +G L+ +L + G
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 144 GLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
L E + +A ++A + YL+ +HRD+ A N ++ K+ DFG R
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR---- 175
Query: 204 DSAVSHISTQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ KG G ++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 176 --DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 36/235 (15%)
Query: 49 NFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLE-FKNEILTWSKIEHL 106
+F P +G GG G V++ K K D A+KR R + L E E+ +K+EH
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHP 63
Query: 107 NLVKLF-GFLE-HGDERI----------IVVEYVGNGTLREHLDGRGGNGLELAER---L 151
+V+ F +LE + E++ I ++ L++ ++GR +E ER L
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCL 121
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
I + +A A+ +LH+ ++HRD+K SNI T KV DFG ++D +
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 212 TQVK---------GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
T + GT Y+ P+ + + K D++S G++L E++ YP ++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQ 230
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMXGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 62
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 120
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 176
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTL---------------------REHLDGRGG 142
+H N+V L G HG +++ EY G L E LD G
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 143 NGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE 202
LEL + L + VA + +L + + IHRDV A N+L+T AK+ DFG AR
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 203 EDSAVSHISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
DS + VKG A ++ P+ + T +SDV+S+G+LL E+ +
Sbjct: 210 NDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 56 IGEGGSGTVYKGKL-----KDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+GEG G V + G VAVK + K + + + K EI + H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVK-SLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 111 LFGFL-EHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
G E G I +++E++ +G+L+E+L + N + L ++L A+ + + YL +
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRT 228
+HRD+ A N+L+ + + K+ DFG + E D + + P+ L
Sbjct: 135 ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 229 YQLTEKSDVYSFGVLLVEMMT 249
+ SDV+SFGV L E++T
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVKLF 112
IG+G G VY G+ D + ++ A K+ + + F E L + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 113 GFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G + + +++ Y+ +G L + + N + + + + VA + YL ++
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVARGMEYL---AEQK 144
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFAR--MSEEDSAVS---HISTQVKGTAGYLDPDYL 226
+HRD+ A N ++ E KV DFG AR + E +V H VK TA + L
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL----ESL 200
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYP 253
+TY+ T KSDV+SFGVLL E++T P
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLL---LEFKNEILTWSKIEHLNLVKLF 112
+GEG G VY+G + + A K C L +F +E + ++H ++VKL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G +E + I++E G L +L+ R N L++ + ++ + A+ YL + +
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESIN---C 146
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HRD+ NIL+ K+ DFG +R E++ T++ ++ P+ + + T
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFT 204
Query: 233 EKSDVYSFGVLLVEMMT-GRYPI 254
SDV+ F V + E+++ G+ P
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPF 227
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMXGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLL---LEFKNEILTWSKIEHLNLVKLF 112
+GEG G VY+G + + A K C L +F +E + ++H ++VKL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G +E + I++E G L +L+ R N L++ + ++ + A+ YL + +
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESIN---C 130
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HRD+ NIL+ K+ DFG +R E++ T++ ++ P+ + + T
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFT 188
Query: 233 EKSDVYSFGVLLVEMMT-GRYPI 254
SDV+ F V + E+++ G+ P
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPF 211
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILT 99
+N + +G G G VY+G++ D S VAVK + ++ D+ L+F E L
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALI 103
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIA 154
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 104 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 163
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIS 211
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 164 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAS 214
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKER 263
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 274
Query: 264 VT 265
VT
Sbjct: 275 VT 276
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILT 99
+N + +G G G VY+G++ D S VAVK + ++ D+ L+F E L
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALI 78
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIA 154
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 138
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIS 211
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 139 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAS 189
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKER 263
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 249
Query: 264 VT 265
VT
Sbjct: 250 VT 251
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILT 99
+N + +G G G VY+G++ D S VAVK + ++ D+ L+F E L
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALI 86
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIA 154
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIS 211
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAS 197
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKER 263
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257
Query: 264 VT 265
VT
Sbjct: 258 VT 259
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 36/234 (15%)
Query: 56 IGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILTWSKIEHLN 107
+G G G VY+G++ D S VAVK + ++ D+ L+F E L SK H N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALIISKFNHQN 94
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAIDVAHALT 162
+V+ G R I++E + G L+ L + L + + L +A D+A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 163 YLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
YL IHRD+ A N L+T AK+ DFG AR + S KG
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKGGCA 205
Query: 220 -----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVT 265
++ P+ T K+D +SFGVLL E+ + YP +S + + E VT
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLL---LEFKNEILTWSKIEHLNLVKLF 112
+GEG G VY+G + + A K C L +F +E + ++H ++VKL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G +E + I++E G L +L+ R N L++ + ++ + A+ YL + +
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESIN---C 134
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HRD+ NIL+ K+ DFG +R E++ T++ ++ P+ + + T
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFT 192
Query: 233 EKSDVYSFGVLLVEMMT-GRYPI 254
SDV+ F V + E+++ G+ P
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPF 215
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSIVAVKRARKNKHDKCLL---LEFKNEILTW 100
+N + +G G G VY+G++ D S + V A K + C L+F E L
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV--AVKTLPEVCSEQDELDFLMEALII 88
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAI 155
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIST 212
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASY 199
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E V
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Query: 265 T 265
T
Sbjct: 260 T 260
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLL 91
F +E + E + ++G+G G VY+G +D + VAVK ++ + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERI 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGN 143
EF NE ++V+L G + G ++V+E + +G L+ +L + G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 144 GLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
L E + +A ++A + YL+ +HRD+ A N ++ K+ DFG R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 204 DSAVSHISTQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ KG G ++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 179 --DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSIVAVKRARKNKHDKCLL---LEFKNEILTW 100
+N + +G G G VY+G++ D S + V A K + C L+F E L
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV--AVKTLPEVCSEQDELDFLMEALII 114
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAI 155
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIST 212
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 175 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASY 225
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E V
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 285
Query: 265 T 265
T
Sbjct: 286 T 286
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E F+ ++IG+G G VYKG V + + + + + + EI S+ +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+ + FG + I++EY+G G+ LD LE I ++ L YLH+
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSA---LDLLKPGPLEETYIATILREILKGLDYLHSE 135
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-----GTAGYLD 222
IHRD+KA+N+L++E+ K+ DFG A + TQ+K GT ++
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--------TQIKRNXFVGTPFWMA 184
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAG------ 276
P+ ++ K+D++S G+ +E+ G P P++ I G
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPF 244
Query: 277 ----DAILVMDPRLRRT 289
+A L DPR R T
Sbjct: 245 KEFVEACLNKDPRFRPT 261
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 36/234 (15%)
Query: 56 IGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILTWSKIEHLN 107
+G G G VY+G++ D S VAVK + ++ D+ L+F E L SK H N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALIISKFNHQN 109
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAIDVAHALT 162
+V+ G R I++E + G L+ L + L + + L +A D+A
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 163 YLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
YL IHRD+ A N L+T AK+ DFG AR + S KG
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKGGCA 220
Query: 220 -----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVT 265
++ P+ T K+D +SFGVLL E+ + YP +S + + E VT
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSIVAVKRARKNKHDKCLL---LEFKNEILTW 100
+N + +G G G VY+G++ D S + V A K + C L+F E L
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV--AVKTLPEVCSEQDELDFLMEALII 94
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAI 155
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIST 212
D+A YL IHRD+ A N L+T AK+ DFG AR + S
Sbjct: 155 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASY 205
Query: 213 QVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERV 264
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E V
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 265
Query: 265 T 265
T
Sbjct: 266 T 266
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFK---NEIL 98
I+K TE +G G GTV+KG + +G + + K DK F+ + +L
Sbjct: 9 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 99 TWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-DGRGGNGLELAERLDIAIDV 157
++H ++V+L G G +V +Y+ G+L +H+ RG G +L L+ + +
Sbjct: 68 AIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL--LNWGVQI 124
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGT 217
A + YL + ++HR++ A N+L+ + +V DFG A + D + ++ K
Sbjct: 125 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-QLLYSEAKTP 180
Query: 218 AGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
++ + + + T +SDV+S+GV + E+MT
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 55 KIGEGGSGTVYKGKLKDG-SIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIGEG GTV+K K ++ IVA+KR R + D+ + EI +++H N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 114 FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPII 173
L H D+++ +V + L+++ D G+ L+ + L + H+ + ++
Sbjct: 69 VL-HSDKKLTLVFEFCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTE 233
HRD+K N+LI K+ +FG AR V S +V T Y PD L +L
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 234 KS-DVYSFGVLLVEMMTGRYPI 254
S D++S G + E+ P+
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 52/255 (20%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLE------------LAER- 150
+H N+V L G HG +++ EY G L L + GLE L+ R
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 151 -LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
L + VA + +L + + IHRDV A N+L+T AK+ DFG AR DS
Sbjct: 168 LLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS---- 220
Query: 210 ISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYP--IESKKPI 260
+ VKG A ++ P+ + T +SDV+S+G+LL E+ + YP + + K
Sbjct: 221 -NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
Query: 261 KERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK- 319
K LV D PA A + I + C A RPT ++
Sbjct: 280 K------------------LVKDGYQMAQPA--FAPKNIYSIMQACWALEPTHRPTFQQI 319
Query: 320 CAEILWKIRKDFREK 334
C+ + + ++D RE+
Sbjct: 320 CSFLQEQAQEDRRER 334
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDK-CLLLEFKNEILTWSKIEH 105
++F +G+G G VY + K I+A+K K++ +K + + + EI S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 106 LNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
N+++++ + H +RI +++E+ G L + L G + ++A AL Y
Sbjct: 74 PNILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H +IHRD+K N+L+ K K+ DFG++ A S + GT YL P+
Sbjct: 131 HERK---VIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPE 182
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ EK D++ GVL E + G P +S
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDK-CLLLEFKNEILTWSKIEH 105
++F +G+G G VY + K I+A+K K++ +K + + + EI S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 106 LNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
N+++++ + H +RI +++E+ G L + L G + ++A AL Y
Sbjct: 75 PNILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 131
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H +IHRD+K N+L+ K K+ DFG++ A S + GT YL P+
Sbjct: 132 HERK---VIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPE 183
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ EK D++ GVL E + G P +S
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 64
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 122
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 123 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 178
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH 105
E++ +GEG G V + VAVK + C K EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNH 63
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+VK +G G+ + + +EY G L + ++ G A+R + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH 121
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
I HRD+K N+L+ E+ K++DFG A + ++ + ++ GT Y+ P+
Sbjct: 122 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPEL 177
Query: 226 LRTYQL-TEKSDVYSFGVLLVEMMTGRYP 253
L+ + E DV+S G++L M+ G P
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDK-CLLLEFKNEILTWSKIEH 105
++F +G+G G VY + K I+A+K K++ +K + + + EI S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 106 LNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
N+++++ + H +RI +++E+ G L + L G + ++A AL Y
Sbjct: 74 PNILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H +IHRD+K N+L+ K K+ DFG++ A S + GT YL P+
Sbjct: 131 HERK---VIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPE 182
Query: 225 YLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ EK D++ GVL E + G P +S
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 36/234 (15%)
Query: 56 IGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILTWSKIEHLN 107
+G G G VY+G++ D S VAVK + ++ D+ L+F E L SK H N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDE---LDFLMEALIISKFNHQN 109
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAIDVAHALT 162
+V+ G R I++E + G L+ L + L + + L +A D+A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 163 YLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
YL IHRD+ A N L+T AK+ DFG AR + S KG
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRASYYRKGGCA 220
Query: 220 -----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVT 265
++ P+ T K+D +SFGVLL E+ + YP +S + + E VT
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 274
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 55 KIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G VY+G +D + VAVK ++ + +EF NE ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHV 82
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGNGLELAERLDIAIDVAHA 160
V+L G + G ++V+E + +G L+ +L + G L E + +A ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG- 219
+ YL+ +HRD+ A N ++ K+ DFG R + KG G
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKGL 193
Query: 220 ----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 46 ATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRAR---KNKHDKCLLLEFKNEILTWS 101
AT + P +IG G GTVYK + G VA+K R L + E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 102 KIE---HLNLVKLFGFL--EHGDERI---IVVEYVGNGTLREHLDGRGGNGLELAERLDI 153
++E H N+V+L D I +V E+V + LR +LD GL D+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
L +LH I+HRD+K NIL+T K+ DFG AR+ A+ T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL----TP 178
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
V T Y P+ L D++S G + EM
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E F+ KIG+G G V+KG V + + + + + + EI S+ +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+ K +G + I++EY+G G+ + L+ + ++A I ++ L YLH+
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---TILREILKGLDYLHSE 138
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-----GTAGYLD 222
IHRD+KA+N+L++E K+ DFG A + TQ+K GT ++
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--------TQIKRNXFVGTPFWMA 187
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ ++ K+D++S G+ +E+ G P P+K
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 81
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL----DGRGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 142 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 192
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E F+ KIG+G G V+KG V + + + + + + EI S+ +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+ K +G + I++EY+G G+ + L+ + ++A I ++ L YLH+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---TILREILKGLDYLHSE 123
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-----GTAGYLD 222
IHRD+KA+N+L++E K+ DFG A + TQ+K GT ++
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--------TQIKRNXFVGTPFWMA 172
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ ++ K+D++S G+ +E+ G P P+K
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 211
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
E F+ KIG+G G V+KG V + + + + + + EI S+ +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+ K +G + I++EY+G G+ + L+ + ++A I ++ L YLH+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---TILREILKGLDYLHSE 123
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-----GTAGYLD 222
IHRD+KA+N+L++E K+ DFG A + TQ+K GT ++
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--------TQIKRNTFVGTPFWMA 172
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ ++ K+D++S G+ +E+ G P P+K
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 211
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 71
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL----DGRGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 132 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 182
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 35 TINFSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK 94
T N F+ + E F+ KIG+G G V+KG V + + + + + +
Sbjct: 15 TENLYFQSM-DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ 73
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
EI S+ + + K +G + I++EY+G G+ + L+ + ++A I
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---TIL 130
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L YLH+ IHRD+KA+N+L++E K+ DFG A + TQ+
Sbjct: 131 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--------TQI 179
Query: 215 K-----GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
K GT ++ P+ ++ K+D++S G+ +E+ G P P+K
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 66
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 127 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIXETD 177
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 78 KRARKNKHDKCLLLE--------FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVG 129
KR +K KC+ E +NEI KI+H N+V L E G ++++ V
Sbjct: 40 KRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 130 NGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNIL---ITE 186
G L + + +G A RL V A+ YLH D I+HRD+K N+L + E
Sbjct: 100 GGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDE 154
Query: 187 KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVE 246
+ ++DFG ++M + S +S GT GY+ P+ L ++ D +S GV+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 247 MMTGRYPI 254
++ G P
Sbjct: 211 LLCGYPPF 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 31/273 (11%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERII--VVEYVG 129
G +VAVK A K L ++ EI + H ++VK G E E+ + V+EYV
Sbjct: 38 GEMVAVK-ALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 130 NGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLR 189
G+LR++L + + LA+ L A + + YLH IHR + A N+L+
Sbjct: 97 LGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRL 150
Query: 190 AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
K+ DFG A+ E + + P+ L+ + SDV+SFGV L E++T
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
Query: 250 GRYPIESKKP----------IKERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKI 299
Y ++ P + ++T+ + L+ G+ + PR R P +I
Sbjct: 211 --YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERL----PRPDRCPC------EI 258
Query: 300 LGLADVCLAPTRQSRPTMKKCAEILWKIRKDFR 332
L C RPT + IL ++ ++
Sbjct: 259 YHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 31/273 (11%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERII--VVEYVG 129
G +VAVK A K L ++ EI + H ++VK G E E+ + V+EYV
Sbjct: 37 GEMVAVK-ALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 130 NGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLR 189
G+LR++L + + LA+ L A + + YLH IHR + A N+L+
Sbjct: 96 LGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRL 149
Query: 190 AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
K+ DFG A+ E + + P+ L+ + SDV+SFGV L E++T
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
Query: 250 GRYPIESKKP----------IKERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKI 299
Y ++ P + ++T+ + L+ G+ + PR R P +I
Sbjct: 210 --YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERL----PRPDRCPC------EI 257
Query: 300 LGLADVCLAPTRQSRPTMKKCAEILWKIRKDFR 332
L C RPT + IL ++ ++
Sbjct: 258 YHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 78 KRARKNKHDKCLLLE--------FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVG 129
KR +K KC+ E +NEI KI+H N+V L E G ++++ V
Sbjct: 40 KRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 130 NGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNIL---ITE 186
G L + + +G A RL V A+ YLH D I+HRD+K N+L + E
Sbjct: 100 GGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDE 154
Query: 187 KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVE 246
+ ++DFG ++M + S +S GT GY+ P+ L ++ D +S GV+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 247 MMTGRYPI 254
++ G P
Sbjct: 211 LLCGYPPF 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 29/231 (12%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLL 91
F +E + E + ++G+G G VY+G +D + VAVK ++ + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERI 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGN 143
EF NE ++V+L G + G ++V+E + +G L+ +L + G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 144 GLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
L E + +A ++A + YL+ +HRD+ A N ++ K+ DFG R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 204 DSAVSHISTQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ + KG G ++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 179 --DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 75
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 136 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIXETD 186
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G+G G VYK + K+ S++A + K ++ L ++ EI + +H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAIDVAHALTYLHTYS 168
+ + I++E+ G + + LEL L + AL YLH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVM-------LELERPLTESQIQVVCKQTLDALNYLH--- 152
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL-- 226
D IIHRD+KA NIL T K+ DFG +S +++ GT ++ P+ +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 227 -----RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
R Y K+DV+S G+ L+EM P P++
Sbjct: 210 ETSKDRPYDY--KADVWSLGITLIEMAEIEPPHHELNPMR 247
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 78 KRARKNKHDKCLLLE--------FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVG 129
KR +K KC+ E +NEI KI+H N+V L E G ++++ V
Sbjct: 40 KRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 130 NGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNIL---ITE 186
G L + + +G A RL V A+ YLH D I+HRD+K N+L + E
Sbjct: 100 GGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDE 154
Query: 187 KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVE 246
+ ++DFG ++M + S +S GT GY+ P+ L ++ D +S GV+
Sbjct: 155 DSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 210
Query: 247 MMTGRYPI 254
++ G P
Sbjct: 211 LLCGYPPF 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 56 IGEGGSGTVYKGK------LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
IGEG G V++ + + ++VAVK ++ + +F+ E ++ ++ N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-MQADFQREAALMAEFDNPNIV 113
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHL----------------------DGRGGNGLEL 147
KL G G ++ EY+ G L E L G L
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR---MSEED 204
AE+L IA VA + YL S+ +HRD+ N L+ E + K+ DFG +R ++
Sbjct: 174 AEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
A + + ++ ++ P+ + + T +SDV+++GV+L E+ +
Sbjct: 231 KADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G+G G VYK + K+ S++A + K ++ L ++ EI + +H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAIDVAHALTYLHTYS 168
+ + I++E+ G + + LEL L + AL YLH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVM-------LELERPLTESQIQVVCKQTLDALNYLH--- 152
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL-- 226
D IIHRD+KA NIL T K+ DFG +S +++ GT ++ P+ +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 227 -----RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
R Y K+DV+S G+ L+EM P P++
Sbjct: 210 ETSKDRPYDY--KADVWSLGITLIEMAEIEPPHHELNPMR 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLL 91
F +E + E + ++G+G G VY+G +D + VAVK ++ + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERI 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGN 143
EF NE ++V+L G + G ++V+E + +G L+ +L + G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 144 GLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
L E + +A ++A + YL+ +HRD+ A N ++ K+ DFG R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 204 DSAVSHISTQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ KG G ++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 179 --DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
+NEI KI+H N+V L E G ++++ V G L + + +G A RL
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL- 121
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNIL---ITEKLRAKVTDFGFARMSEEDSAVSH 209
V A+ YLH D I+HRD+K N+L + E + ++DFG ++M + S +S
Sbjct: 122 -IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 210 ISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
GT GY+ P+ L ++ D +S GV+ ++ G P
Sbjct: 178 AC----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
++G+G G VYK + K+ S++A + K ++ L ++ EI + +H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAIDVAHALTYLHTYS 168
+ + I++E+ G + + LEL L + AL YLH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVM-------LELERPLTESQIQVVCKQTLDALNYLH--- 152
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL-- 226
D IIHRD+KA NIL T K+ DFG +S +++ GT ++ P+ +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 227 -----RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
R Y K+DV+S G+ L+EM P P++
Sbjct: 210 ETSKDRPYDY--KADVWSLGITLIEMAEIEPPHHELNPMR 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILT 99
+N + +G G G VY+G++ D S VAVK + ++ D+ L+F E L
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALI 87
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIA 154
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIS 211
D+A YL IHRD+ A N L+T AK+ DFG A+ + S
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ------DIYRAS 198
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKER 263
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 258
Query: 264 VT 265
VT
Sbjct: 259 VT 260
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E + +K+GEG TVYKGK K ++VA+K R +H++ E+ ++H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHA 60
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
N+V L + +V EY+ + L+++LD GN + + + L Y H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K N+LI E+ K+ DFG AR S + T Y PD L
Sbjct: 119 QK---VLHRDLKPQNLLINERGELKLADFGLARAK---SIPTKTYDNEVVTLWYRPPDIL 172
Query: 227 R-TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERV 264
+ + + D++ G + EM TGR P+ ++E++
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEEQL 210
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 36/234 (15%)
Query: 56 IGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILTWSKIEHLN 107
+G G G VY+G++ D S VAVK + ++ D+ L+F E L SK H N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALIISKFNHQN 135
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIAIDVAHALT 162
+V+ G R I++E + G L+ L + L + + L +A D+A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 163 YLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
YL IHRD+ A N L+T AK+ DFG AR + KG
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAGYYRKGGCA 246
Query: 220 -----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKERVT 265
++ P+ T K+D +SFGVLL E+ + YP +S + + E VT
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 48 ENFSPANKIGEGGSGTVYKGKL----KDGSI--VAVKRARK--NKHDKCLLLEFKNEILT 99
+N + +G G G VY+G++ D S VAVK + ++ D+ L+F E L
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE---LDFLMEALI 104
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-----DGRGGNGLELAERLDIA 154
SK H N+V+ G R I++E + G L+ L + L + + L +A
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 164
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHIS 211
D+A YL IHRD+ A N L+T AK+ DFG AR +
Sbjct: 165 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------DIYRAG 215
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYPIESKKPIKER 263
KG ++ P+ T K+D +SFGVLL E+ + YP +S + + E
Sbjct: 216 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 275
Query: 264 VT 265
VT
Sbjct: 276 VT 277
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 56 IGEGGSGTVYKGKLKDGSI-----VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
IG+G G V + K + V K+A K ++ ++ +N +L ++H LV
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL--KNVKHPFLVG 103
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L + D+ V++Y+ G L HL R LE R A ++A AL YLH+ +
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARF-YAAEIASALGYLHSLN-- 159
Query: 171 PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
I++RD+K NIL+ + +TDFG + + E ++ ++ GT YL P+ L
Sbjct: 160 -IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST---TSTFCGTPEYLAPEVLHKQP 215
Query: 231 LTEKSDVYSFGVLLVEMMTGRYPIESK 257
D + G +L EM+ G P S+
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSR 242
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 42 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 100
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 101 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 154
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI E+ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 155 KPENLLIDEQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 209 WALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLLEFKNEILTWS 101
E + ++G+G G VY+G +D + VAVK ++ + +EF NE
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMK 74
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGNGLELAERLDI 153
++V+L G + G ++V+E + +G L+ +L + G L E + +
Sbjct: 75 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 134
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
A ++A + YL+ +HRD+ A N ++ K+ DFG R +
Sbjct: 135 AAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR------DIYETDYY 185
Query: 214 VKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 186 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 76 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 134
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 135 SNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 189
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK------RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 244 ALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 76 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 134
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 135 SN-LYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 188
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 243 WALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 81
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 142 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 192
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFAEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLL 91
F +E A E + + ++G+G G VY KG +KD + VA+K + + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERI 64
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL-- 145
EF NE + ++V+L G + G ++++E + G L+ +L N +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 146 --ELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
L++ + +A ++A + YL+ +HRD+ A N ++ E K+ DFG R
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR---- 177
Query: 204 DSAVSHISTQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 178 --DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 50 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 108
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 109 SN-LYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 162
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 163 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 217 WALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 74
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 135 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 185
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 74
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 135 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 185
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 68
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 129 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 179
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDK-CLLLEFKNEILTWSKIEH 105
++F +G+G G VY + K IVA+K K++ +K + + + EI + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 106 LNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
N+++L+ + +++EY G L + L + + I ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYCH 140
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+IHRD+K N+L+ K K+ DFG++ A S + GT YL P+
Sbjct: 141 GKK---VIHRDIKPENLLLGLKGELKIADFGWS-----VHAPSLRRKTMCGTLDYLPPEM 192
Query: 226 LRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ EK D++ GVL E++ G P ES
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 75
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 136 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 186
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 56 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAVK K + + L + E+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF S E + + + T G+ Y P+ +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF---SNEFTFGNKLDTFC-GSPPYAAPELFQ 185
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 245
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 246 KFLILNPSKRGT 257
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N+V L G HG +++ EY G L L R LE IA A
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTASTRDL 166
Query: 164 LHTYSDPP----------IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
LH S IHRDV A N+L+T AK+ DFG AR DS ++I
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYI--- 221
Query: 214 VKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYP--IESKKPIKERV 264
VKG A ++ P+ + T +SDV+S+G+LL E+ + YP + + K K
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK--- 278
Query: 265 TIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK-CAEI 323
LV D PA A + I + C A RPT ++ C+ +
Sbjct: 279 ---------------LVKDGYQMAQPA--FAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
Query: 324 LWKIRKDFREK 334
+ ++D RE+
Sbjct: 322 QEQAQEDRRER 332
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE +G G GTVYKG + DG VA+K R+N K
Sbjct: 7 NQALLRILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK- 64
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL-DGRGGNGLELAER 150
E +E + + + +L G ++ V + + G L +H+ + RG G + +
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQ--DL 121
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
L+ + +A ++YL D ++HRD+ A N+L+ K+TDFG AR+ + D H
Sbjct: 122 LNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH- 177
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ K ++ + + + T +SDV+S+GV + E+MT
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAVK K + + L + E+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF S E + + + T G+ Y P+ +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF---SNEFTFGNKLDTFC-GSPPYAAPELFQ 185
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 245
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 246 KFLILNPSKRGT 257
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 56 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAVK K + + L + E+ + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAVQYCH-- 123
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF S E + + + T G+ Y P+ +
Sbjct: 124 -QKFIVHRDLKAENLLLDADMNIKIADFGF---SNEFTFGNKLDTFC-GSPPYAAPELFQ 178
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERVT-----IRWAMQ--CLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV I + M C
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 238
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 239 KFLILNPSKRGT 250
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 50/253 (19%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGR------------GGNGLELAERL 151
+H N+V L G HG +++ EY G L L + + L + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+ VA + +L + + IHRDV A N+L+T AK+ DFG AR DS ++I
Sbjct: 168 HFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--NYI- 221
Query: 212 TQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT---GRYP--IESKKPIKE 262
VKG A ++ P+ + T +SDV+S+G+LL E+ + YP + + K K
Sbjct: 222 --VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK- 278
Query: 263 RVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK-CA 321
LV D PA A + I + C A RPT ++ C+
Sbjct: 279 -----------------LVKDGYQMAQPA--FAPKNIYSIMQACWALEPTHRPTFQQICS 319
Query: 322 EILWKIRKDFREK 334
+ + ++D RE+
Sbjct: 320 FLQEQAQEDRRER 332
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 103
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N ++ E K+ DFG R +
Sbjct: 164 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR------DIYETD 214
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 141
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 142 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 131
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 132 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 48 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 106
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 107 SNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 161
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 162 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 216 ALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 55 KIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
+IG G TVYKG + ++ VA + K K FK E ++H N+V+ +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 114 FLE---HGDERIIVV-EYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E G + I++V E +GTL+ +L +++ + L +LHT +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW--CRQILKGLQFLHTRT- 149
Query: 170 PPIIHRDVKASNILITEKL-RAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD-YLR 227
PPIIHRD+K NI IT K+ D G A + + + V GT + P+ Y
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-----ASFAKAVIGTPEFXAPEXYEE 204
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYP---IESKKPIKERVT 265
Y E DVY+FG +E T YP ++ I RVT
Sbjct: 205 KYD--ESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVT 243
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK----DGSIVAVKRARKNKHDKCLLLEFKNEILTWSK 102
+E + K+G G G V + K + +I +++ + LLE E+
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE---EVAVLKL 92
Query: 103 IEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHAL- 161
++H N++KL+ F E +V+E G L + + R ++ E +D A+ + L
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR----MKFNE-VDAAVIIKQVLS 147
Query: 162 --TYLHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKG 216
TYLH ++ I+HRD+K N+L+ K + K+ DFG + + E + + G
Sbjct: 148 GVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK----ERLG 200
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
TA Y+ P+ LR + EK DV+S GV+L ++ G YP
Sbjct: 201 TAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG-YP 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 55 KIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G VY+G +D + VAVK ++ + +EF NE ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHV 82
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGNGLELAERLDIAIDVAHA 160
V+L G + G ++V+E + +G L+ +L + G L E + +A ++A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG- 219
+ YL+ +HR++ A N ++ K+ DFG R + KG G
Sbjct: 143 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR------DIYETDYYRKGGKGL 193
Query: 220 ----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 135
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 136 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 56 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 169
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 76 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 134
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 135 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 189
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 244 ALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 56 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 169
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 170 PENLLIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 55 KIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++G+G G VY+G +D + VAVK ++ + +EF NE ++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHV 83
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHL--------DGRGGNGLELAERLDIAIDVAHA 160
V+L G + G ++V+E + +G L+ +L + G L E + +A ++A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAG- 219
+ YL+ +HR++ A N ++ K+ DFG R + KG G
Sbjct: 144 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR------DIYETDYYRKGGKGL 194
Query: 220 ----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
++ P+ L+ T SD++SFGV+L E+ +
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 56 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 56 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 141
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 142 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 131
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 132 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ +M G P + +PI+
Sbjct: 222 WALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHKETGNHFAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 56 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 35/279 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRAR---KNKHDKCLLLEFKNEILTWSKI 103
++ P ++G G G V K + + G I+AVKR R ++ K LL++ + T +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT---V 107
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL--DIAIDVAHAL 161
+ V +G L + I +E + + +L + G + E + IA+ + AL
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 166
Query: 162 TYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
+LH S +IHRDVK SN+LI + K+ DFG + DS I G Y+
Sbjct: 167 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDA---GCKPYM 220
Query: 222 DPDY----LRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGD 277
P+ L + KSD++S G+ ++E+ R+P +S W +
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPFQQLKQ 269
Query: 278 AILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPT 316
+ P+L PA + E + CL + RPT
Sbjct: 270 VVEEPSPQL---PADKFSAE-FVDFTSQCLKKNSKERPT 304
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 21/235 (8%)
Query: 35 TINFSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK 94
T N F+ + +S +IG GGS V++ + I A+K + D L ++
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYR 74
Query: 95 NEILTWSKIEHLN--LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
NEI +K++ + +++L+ + E D+ I +V GN L L + ++ ER
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKS 131
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
++ A+ +H + I+H D+K +N LI + + K+ DFG A + D+ +
Sbjct: 132 YWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDS 187
Query: 213 QVKGTAGYLDPDYLRTYQLTEKS-----------DVYSFGVLLVEMMTGRYPIES 256
QV GT Y+ P+ ++ + ++ DV+S G +L M G+ P +
Sbjct: 188 QV-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHKETGNHFAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHKETGNHFAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 48 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 106
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 107 SN-LYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 160
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 215 WALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAVK K + + L + E+ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 133
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF S E + + + T G+ Y P+ +
Sbjct: 134 Y---IVHRDLKAENLLLDGDMNIKIADFGF---SNEFTVGNKLDT-FCGSPPYAAPELFQ 186
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV 264
+ + DV+S GV+L +++G P + + K ++ERV
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 135
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 136 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAV+ K + + L + E+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF S E + + + T G+ Y P+ +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGF---SNEFTFGNKLDTFC-GSPPYAAPELFQ 185
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 245
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 246 KFLILNPSKRGT 257
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKH 85
G N + I K TE F +G G GTVYKG + +G VA+K R+
Sbjct: 1 GSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 86 DKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRG 141
K E +E + +++ ++ +L G ++I+ + + G L REH D G
Sbjct: 60 PKANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIG 117
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++
Sbjct: 118 SQYL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 202 EEDSAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 46 ATENFSPANKIGEGGSGTVY----KGKLKDG--SIVAVKRARKNKHDKCLLLEFKNEILT 99
A E + + ++G+G G VY KG +KD + VA+K + + +EF NE
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASV 68
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGL----ELAERL 151
+ ++V+L G + G ++++E + G L+ +L N + L++ +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+A ++A + YL+ +HRD+ A N + E K+ DFG R +
Sbjct: 129 QMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTR------DIYETD 179
Query: 212 TQVKGTAG-----YLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG G ++ P+ L+ T SDV+SFGV+L E+ T
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 41 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 99
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 100 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 154
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 155 PENLLIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWW 208
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 209 ALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL-----LLEFKNEILTWSKIEHLNLV 109
K+G+G G V +G+ S V A K L + +F E+ ++H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
+L+G + ++ V E G+L + L G+ L L A+ VA + YL +
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKR- 131
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
IHRD+ A N+L+ + K+ DFG R ++ + K + P+ L+T
Sbjct: 132 --FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 230 QLTEKSDVYSFGVLLVEMMT-GRYP 253
+ SD + FGV L EM T G+ P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS--EEDSAVSHISTQ 213
++A AL +LH+ II+RD+K NIL+ E+ K+TDFG ++ S E A S
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--- 188
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTI----RWA 269
GT Y+ P+ + T+ +D +SFGVL+ EM+TG P + K KE +T+ +
Sbjct: 189 --GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTMILKAKLG 245
Query: 270 MQCLKAGDAILVMDPRLRRTPASNMA 295
M + +A ++ +R PA+ +
Sbjct: 246 MPQFLSPEAQSLLRMLFKRNPANRLG 271
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N++I ++ +VTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLIIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VA+K K + + L + E+ + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +++EY G + ++L G ++ E + A+ Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQK 130
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF S E + + T G+ Y P+ +
Sbjct: 131 R---IVHRDLKAENLLLDADMNIKIADFGF---SNEFTVGGKLDT-FCGSPPYAAPELFQ 183
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 243
Query: 278 AILVMDPRLRRT 289
LV++P R T
Sbjct: 244 RFLVLNPIKRGT 255
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 94 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 143
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 94 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 143
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS--EEDSAVSHISTQ 213
++A AL +LH+ II+RD+K NIL+ E+ K+TDFG ++ S E A S
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--- 187
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTI----RWA 269
GT Y+ P+ + T+ +D +SFGVL+ EM+TG P + K KE +T+ +
Sbjct: 188 --GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTMILKAKLG 244
Query: 270 MQCLKAGDAILVMDPRLRRTPASNMA 295
M + +A ++ +R PA+ +
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANRLG 270
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 56 IGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G + V Y K+ VA+KR K + E EI S+ H N+V +
Sbjct: 18 IGSGATAVVQAAYCAPKKEK--VAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVSYY 74
Query: 113 GFLEHGDERIIVVEYVGNGTLRE---HLDGRGGNGLELAERLDIAI---DVAHALTYLHT 166
DE +V++ + G++ + H+ +G + + + IA +V L YLH
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARM--SEEDSAVSHISTQVKGTAGYLDPD 224
IHRDVKA NIL+ E ++ DFG + + D + + GT ++ P+
Sbjct: 135 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 225 YL---RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ R Y K+D++SFG+ +E+ TG P P+K
Sbjct: 192 VMEQVRGYDF--KADIWSFGITAIELATGAAPYHKYPPMK 229
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYAPGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ KVTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 48 ENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRAR---KNKHDKCLLLEFKNEILTWSKI 103
++ P ++G G G V K + + G I+AVKR R ++ K LL++ + T +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT---V 63
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL--DIAIDVAHAL 161
+ V +G L + I +E + + +L + G + E + IA+ + AL
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 162 TYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
+LH S +IHRDVK SN+LI + K+ DFG + +D A I G Y+
Sbjct: 123 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDA---GCKPYM 176
Query: 222 DPDY----LRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGD 277
P+ L + KSD++S G+ ++E+ R+P +S W +
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPFQQLKQ 225
Query: 278 AILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPT 316
+ P+L PA + E + CL + RPT
Sbjct: 226 VVEEPSPQL---PADKFSAE-FVDFTSQCLKKNSKERPT 260
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 92 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 141
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 142 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 233
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 55 KIGEGGSGTVYKGKL------KDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++GE G VYKG L + VA+K K+K + L EF++E + ++++H N+
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIK-TLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGN--------------GLELAERLDIA 154
V L G + ++ Y +G L E L R + LE + + +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
+A + YL ++ ++H+D+ N+L+ +KL K++D G R + +
Sbjct: 152 AQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 215 KGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYPI--ESKKPIKERVTIRWAMQ 271
++ P+ + + + SD++S+GV+L E+ + G P S + + E + R +
Sbjct: 209 LPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 267
Query: 272 C 272
C
Sbjct: 268 C 268
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS--EEDSAVSHISTQ 213
++A AL +LH+ II+RD+K NIL+ E+ K+TDFG ++ S E A S
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--- 187
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTI----RWA 269
GT Y+ P+ + T+ +D +SFGVL+ EM+TG P + K KE +T+ +
Sbjct: 188 --GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTMILKAKLG 244
Query: 270 MQCLKAGDAILVMDPRLRRTPASNMA 295
M + +A ++ +R PA+ +
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANRLG 270
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 21/235 (8%)
Query: 35 TINFSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFK 94
T N F+ + +S +IG GGS V++ + I A+K + D L ++
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYR 74
Query: 95 NEILTWSKIEHLN--LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
NEI +K++ + +++L+ + E D+ I +V GN L L + ++ ER
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKS 131
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
++ A+ +H + I+H D+K +N LI + + K+ DFG A + D +
Sbjct: 132 YWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDS 187
Query: 213 QVKGTAGYLDPDYLRTYQLTEKS-----------DVYSFGVLLVEMMTGRYPIES 256
QV GT Y+ P+ ++ + ++ DV+S G +L M G+ P +
Sbjct: 188 QV-GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 10/208 (4%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G E + ++V+E G L ++L + ++ +++ V+ + YL +
Sbjct: 436 IGICE-AESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN--- 489
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+HRD+ A N+L+ + AK++DFG ++ D T K + P+ + Y+
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESKK 258
+ KSDV+SFGVL+ E + G+ P K
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 84 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 133
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 134 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 56 IGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
IG G + V Y K+ VA+KR K + E EI S+ H N+V +
Sbjct: 23 IGSGATAVVQAAYCAPKKEK--VAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVSYY 79
Query: 113 GFLEHGDERIIVVEYVGNGTLRE---HLDGRGGNGLELAERLDIAI---DVAHALTYLHT 166
DE +V++ + G++ + H+ +G + + + IA +V L YLH
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARM--SEEDSAVSHISTQVKGTAGYLDPD 224
IHRDVKA NIL+ E ++ DFG + + D + + GT ++ P+
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 225 YL---RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
+ R Y K+D++SFG+ +E+ TG P P+K
Sbjct: 197 VMEQVRGYDF--KADIWSFGITAIELATGAAPYHKYPPMK 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 55 KIGEGGSGTVYKGKL------KDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
++GE G VYKG L + VA+K K+K + L EF++E + ++++H N+
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIK-TLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGN--------------GLELAERLDIA 154
V L G + ++ Y +G L E L R + LE + + +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
+A + YL ++ ++H+D+ N+L+ +KL K++D G R + +
Sbjct: 135 AQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 215 KGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT-GRYPI--ESKKPIKERVTIRWAMQ 271
++ P+ + + + SD++S+GV+L E+ + G P S + + E + R +
Sbjct: 192 LPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 250
Query: 272 C 272
C
Sbjct: 251 C 251
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDG-------SIVAVKRARKNKHDKC 88
N + I K TE F +G G GTVYKG + +G +I+ ++ A K +K
Sbjct: 39 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK- 96
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNG 144
E +E + +++ ++ +L G ++I + + G L REH D G
Sbjct: 97 ---EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 152
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 153 L-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 204
Query: 205 SAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 205 EKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 248
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EYV G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ KV DFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAV+ K + + L + E+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF+ + + + G+ Y P+ +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFCGSPPYAAPELFQ 185
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 245
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 246 KFLILNPSKRGT 257
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKH 85
G N + I K TE F +G G GTVYKG + +G VA+K R+
Sbjct: 1 GSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 86 DKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRG 141
K E +E + +++ ++ +L G ++I + + G L REH D G
Sbjct: 60 PKANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 117
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++
Sbjct: 118 SQYL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 202 EEDSAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
++ F +++G G + VY+ K K + K DK ++ + EI ++ H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV---RTEIGVLLRLSHP 108
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER--LDIAIDVAHALTYL 164
N++KL E E +V+E V G L + + +G +ER D + A+ YL
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYL 164
Query: 165 HTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
H + I+HRD+K N+L K+ DFG +++ E + V GT GY
Sbjct: 165 H---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----LMKTVCGTPGYC 217
Query: 222 DPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQC--------- 272
P+ LR + D++S G++ ++ G P ++ ++ R + C
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER--GDQFMFRRILNCEYYFISPWW 275
Query: 273 ----LKAGDAI---LVMDPRLRRT 289
L A D + +V+DP+ R T
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLT 299
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 78 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 127
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 128 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 78 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 127
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 128 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 72 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 121
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 122 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 10/208 (4%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
G E + ++V+E G L ++L + ++ +++ V+ + YL +
Sbjct: 437 IGICE-AESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN--- 490
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+HRD+ A N+L+ + AK++DFG ++ D T K + P+ + Y+
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 232 TEKSDVYSFGVLLVEMMT-GRYPIESKK 258
+ KSDV+SFGVL+ E + G+ P K
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNK-HDKCLLLEFKNEILTWSKIEHLNLVKL 111
++G G GTV KG ++K + KN+ +D L E E ++++ +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG----RGGNGLELAERLDIAIDVAHALTYLHTY 167
G E + ++V+E G L ++L + N +EL + V+ + YL
Sbjct: 74 IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYL--- 123
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ +HRD+ A N+L+ + AK++DFG ++ D T K + P+ +
Sbjct: 124 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 228 TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKK 258
Y+ + KSDV+SFGVL+ E + G+ P K
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 215
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN-- 107
+S +IG GGS V++ + I A+K + D L ++NEI +K++ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+++L+ + E D+ I +V GN L L + ++ ER ++ A+ +H +
Sbjct: 118 IIRLYDY-EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+H D+K +N LI + + K+ DFG A + D+ +QV GT Y+ P+ ++
Sbjct: 175 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIK 229
Query: 228 TYQLTEKS-----------DVYSFGVLLVEMMTGRYPIE 255
+ ++ DV+S G +L M G+ P +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKH 85
G N + I K TE F +G G GTVYKG + +G VA+K R+
Sbjct: 24 GSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 82
Query: 86 DKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRG 141
K E +E + +++ ++ +L G ++I + + G L REH D G
Sbjct: 83 PKANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 140
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++
Sbjct: 141 SQYL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
Query: 202 EEDSAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 193 GAEEKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 9 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 66
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 67 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-- 123
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 124 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 177
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 178 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 218
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNK-----HDKCLLLEFKNEILTW 100
++ + K+G G G V K K G+ A+K +K+ + LL +E+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL----DEVAVL 75
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHA 160
+++H N++KL+ F E +V+E G L + + R + +D A+ +
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QKFSEVDAAVIMKQV 130
Query: 161 L---TYLHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQV 214
L TYLH ++ I+HRD+K N+L+ K R K+ DFG + E V +
Sbjct: 131 LSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE----VGGKMKER 183
Query: 215 KGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI--ESKKPIKERV 264
GTA Y+ P+ LR + EK DV+S GV+L ++ G P ++ + I +RV
Sbjct: 184 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 6 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 63
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 64 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-- 120
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 121 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 175 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 215
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ KVTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 120 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 123 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 177 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKCLLLEFKNEILTWSKIE-- 104
++F IG G V +LK I A+K +K L +E + W + E
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE-------LVNDDEDIDWVQTEKH 72
Query: 105 -------HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDV 157
H LV L + V+EYV G L H+ + E A + ++
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY--SAEI 130
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGT 217
+ AL YLH II+RD+K N+L+ + K+TD+G M +E ++ GT
Sbjct: 131 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSXFCGT 184
Query: 218 AGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIE 255
Y+ P+ LR D ++ GVL+ EMM GR P +
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 56 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 114
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EY G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 115 SNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 169
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N++I ++ KVTDFGFA+ V + + GT YL P+ + + + D +
Sbjct: 170 PENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAVK K + + L + E+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V+EY G + ++L G ++ E + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF+ + + G Y P+ +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 245
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 246 KFLILNPSKRGT 257
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN-- 107
+S +IG GGS V++ + I A+K + D L ++NEI +K++ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+++L+ + E D+ I +V GN L L + ++ ER ++ A+ +H +
Sbjct: 74 IIRLYDY-EITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+H D+K +N LI + + K+ DFG A + D+ +QV GT Y+ P+ ++
Sbjct: 131 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIK 185
Query: 228 TYQLTEKS-----------DVYSFGVLLVEMMTGRYPIES 256
+ ++ DV+S G +L M G+ P +
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKCLLLEFKNEILTWSKIE-- 104
++F IG G V +LK I A+K +K L +E + W + E
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE-------LVNDDEDIDWVQTEKH 57
Query: 105 -------HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDV 157
H LV L + V+EYV G L H+ + E A + ++
Sbjct: 58 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY--SAEI 115
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGT 217
+ AL YLH II+RD+K N+L+ + K+TD+G M +E ++ GT
Sbjct: 116 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSXFCGT 169
Query: 218 AGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIE 255
Y+ P+ LR D ++ GVL+ EMM GR P +
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 6 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 63
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 64 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL-- 120
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 121 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 175 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E + ++G+G G VYK K K+ +A + + K ++ L ++ EI + +H
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYIVEIEILATCDHP 76
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+VKL G H + I++E+ G + + + GL + + + AL +LH+
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFA-----RMSEEDSAVSHISTQVKGTAGYL 221
IIHRD+KA N+L+T + ++ DFG + + + DS + GT ++
Sbjct: 136 KR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--------GTPYWM 184
Query: 222 DPDYLRTYQLTE-----KSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ + + + K+D++S G+ L+EM P P++
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E + ++G+G G VYK K K+ +A + + K ++ L ++ EI + +H
Sbjct: 10 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYIVEIEILATCDHP 68
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+VKL G H + I++E+ G + + + GL + + + AL +LH+
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFA-----RMSEEDSAVSHISTQVKGTAGYL 221
IIHRD+KA N+L+T + ++ DFG + + + DS + GT ++
Sbjct: 128 KR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--------GTPYWM 176
Query: 222 DPDYLRTYQLTE-----KSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ + + + K+D++S G+ L+EM P P++
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKCLLLEFKNEILTWSKIE-- 104
++F IG G V +LK I A+K +K L +E + W + E
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE-------LVNDDEDIDWVQTEKH 61
Query: 105 -------HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDV 157
H LV L + V+EYV G L H+ + E A + ++
Sbjct: 62 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY--SAEI 119
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGT 217
+ AL YLH II+RD+K N+L+ + K+TD+G M +E ++ GT
Sbjct: 120 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSXFCGT 173
Query: 218 AGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIE 255
Y+ P+ LR D ++ GVL+ EMM GR P +
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE--- 104
++F IG G V +LK + R K + L +E + W + E
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKE------LVNDDEDIDWVQTEKHV 105
Query: 105 ------HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
H LV L + V+EYV G L H+ + E A + +++
Sbjct: 106 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY--SAEIS 163
Query: 159 HALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTA 218
AL YLH II+RD+K N+L+ + K+TD+G M +E ++ GT
Sbjct: 164 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSTFCGTP 217
Query: 219 GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIE 255
Y+ P+ LR D ++ GVL+ EMM GR P +
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN-- 107
+S +IG GGS V++ + I A+K + D L ++NEI +K++ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+++L+ + E D+ I +V GN L L + ++ ER ++ A+ +H +
Sbjct: 118 IIRLYDY-EITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+H D+K +N LI + + K+ DFG A + D+ +QV GT Y+ P+ ++
Sbjct: 175 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIK 229
Query: 228 TYQLTEKS-----------DVYSFGVLLVEMMTGRYPIE 255
+ ++ DV+S G +L M G+ P +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 15 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 72
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 73 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 129
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 130 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 183
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 184 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 123 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 177 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 120 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 12 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 69
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 127 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 181 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNK-----HDKCLLLEFKNEILTW 100
++ + K+G G G V K K G+ A+K +K+ + LL +E+
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL----DEVAVL 58
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHA 160
+++H N++KL+ F E +V+E G L + + R + +D A+ +
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QKFSEVDAAVIMKQV 113
Query: 161 L---TYLHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQV 214
L TYLH ++ I+HRD+K N+L+ K R K+ DFG + E V +
Sbjct: 114 LSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE----VGGKMKER 166
Query: 215 KGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI--ESKKPIKERV 264
GTA Y+ P+ LR + EK DV+S GV+L ++ G P ++ + I +RV
Sbjct: 167 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 123 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 177 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKH 85
G N + I K TE F +G G GTVYKG + +G VA+K R+
Sbjct: 1 GSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 86 DKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRG 141
K E +E + +++ ++ +L G ++I+ + + G L REH D G
Sbjct: 60 PKANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIG 117
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++
Sbjct: 118 SQYL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 202 EEDSAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 11 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 68
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 69 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 125
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 126 ---LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 179
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 180 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 120 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN-- 107
+S +IG GGS V++ + I A+K + D L ++NEI +K++ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+++L+ + E D+ I +V GN L L + ++ ER ++ A+ +H +
Sbjct: 70 IIRLYDY-EITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+H D+K +N LI + + K+ DFG A + D+ +QV GT Y+ P+ ++
Sbjct: 127 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIK 181
Query: 228 TYQLTEKS-----------DVYSFGVLLVEMMTGRYPIES 256
+ ++ DV+S G +L M G+ P +
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKH 85
G N + I K TE F +G G GTVYKG + +G VA+K R+
Sbjct: 1 GSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 86 DKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRG 141
K E +E + +++ ++ +L G ++I+ + + G L REH D G
Sbjct: 60 PKANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIG 117
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++
Sbjct: 118 SQYL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 202 EEDSAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN-- 107
+S +IG GGS V++ + I A+K + D L ++NEI +K++ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+++L+ + E D+ I +V GN L L + ++ ER ++ A+ +H +
Sbjct: 71 IIRLYDY-EITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+H D+K +N LI + + K+ DFG A + D+ +QV GT Y+ P+ ++
Sbjct: 128 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIK 182
Query: 228 TYQLTEKS-----------DVYSFGVLLVEMMTGRYPIE 255
+ ++ DV+S G +L M G+ P +
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 65
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 123 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 177 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EY+ G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ KV DFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EY+ G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N+LI ++ KV DFGFA+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VA+K K + + L + E+ + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +++EY G + ++L G ++ E + A+ Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQK 133
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ + K+ DFGF+ + V G Y P+ +
Sbjct: 134 R---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDAFCGAPPYAAPELFQ 186
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERVT-----IRWAMQ--CLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV I + M C
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 246
Query: 278 AILVMDPRLRRT 289
LV++P R T
Sbjct: 247 RFLVLNPIKRGT 258
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL-- 119
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 120 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN L KL F F ++
Sbjct: 56 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYAPGGEMFSHLR-RIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ KVTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ +VTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 41/226 (18%)
Query: 56 IGE-GGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
IGE G G VYK + K+ S++A + K ++ L ++ EI + +H N+VKL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAIDVAHALTYLHTYS 168
+ + I++E+ G + + LEL L + AL YLH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVM-------LELERPLTESQIQVVCKQTLDALNYLH--- 125
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFA------RMSEEDSAVSHISTQVKGTAGYLD 222
D IIHRD+KA NIL T K+ DFG + + DS + GT ++
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI--------GTPYWMA 177
Query: 223 PDYL-------RTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
P+ + R Y K+DV+S G+ L+EM P P++
Sbjct: 178 PEVVMCETSKDRPYDY--KADVWSLGITLIEMAEIEPPHHELNPMR 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLLEFKNEI 97
I K TE F +G G GTVYKG + +G VA+K R+ K E +E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEA 65
Query: 98 LTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLELAERLDI 153
+ +++ ++ +L G ++I + + G L REH D G L L+
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNW 119
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS-- 211
+ +A + YL D ++HRD+ A N+L+ K+TDFG A++ + H
Sbjct: 120 CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 212 -TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 177 KVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 211
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKH 85
G N + I K TE F +G G GTVYKG + +G VA+K R+
Sbjct: 1 GSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
Query: 86 DKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRG 141
K E +E + +++ ++ +L G ++I + + G L REH D G
Sbjct: 60 PKANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 117
Query: 142 GNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
L L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++
Sbjct: 118 SQYL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 202 EEDSAVSHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 56 GRVMLVKHKETGNHYAMKILD-KQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVLEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ KV DFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKR------VKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EYV G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N+LI ++ +VTDFGFA+ V + + GT L P+ + + + D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLLEFKNEI 97
I K TE F +G G GTVYKG + +G VA+K R+ K E +E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEA 62
Query: 98 LTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLELAERLDI 153
+ +++ ++ +L G ++I + + G L REH D G L L+
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNW 116
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS-- 211
+ +A + YL D ++HRD+ A N+L+ K+TDFG A++ + H
Sbjct: 117 CVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 212 -TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 KVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 208
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 9 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 66
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 67 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-- 123
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 124 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 177
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 178 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
+G G V+ K + G + A+K +K+ + LE NEI KI+H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE--NEIAVLKKIKHENIVTLEDI 74
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
E +V++ V G L + + RG + A + V A+ YLH + I+H
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--VIQQVLSAVKYLH---ENGIVH 129
Query: 175 RDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
RD+K N+L E + +TDFG ++M + I + GT GY+ P+ L
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPY 184
Query: 232 TEKSDVYSFGVLLVEMMTGRYPI--ESKKPIKERV 264
++ D +S GV+ ++ G P E++ + E++
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 38/233 (16%)
Query: 101 SKIEHLNLVKLFGFLEHGDER-----IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
+++ H ++V++F F+EH D IV+EYVG +L+ G L +AE + +
Sbjct: 134 AEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRS----KGQKLPVAEAIAYLL 189
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST--Q 213
++ AL+YLH+ +++ D+K NI++TE+ + K+ D G AVS I++
Sbjct: 190 EILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLG---------AVSRINSFGY 236
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM------TGRY--PIESKKPIKERVT 265
+ GT G+ P+ +RT T +D+Y+ G L + GRY + P+ +
Sbjct: 237 LYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYD 295
Query: 266 IRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMK 318
+ +A D DPR R T A M+ + L +V T RP +
Sbjct: 296 -SYGRLLRRAIDP----DPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLS 343
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 43/293 (14%)
Query: 50 FSPANKIGEGGSGTVYKGK-LKDGSIVAVKR-ARKNKHDKCLLLEFKNEILTWSKIEHLN 107
FS +IG G G VY + +++ +VA+K+ + K + E+ K+ H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 108 LVKLFGFLEHGDERIIVVEY-VGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++ G +V+EY +G+ + + + +E+A A+ L YLH+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL---QGLAYLHS 172
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++ +IHRDVKA NIL++E K+ DFG A ++ + GT ++ P+ +
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVI 222
Query: 227 RTY---QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
Q K DV+S G+ +E+ E K P+ + M + A I
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELA------ERKPPL-------FNMNAMSALYHI---- 265
Query: 284 PRLRRTPA--SNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDFREK 334
+PA S E D CL Q RPT +E+L K R RE+
Sbjct: 266 -AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRER 313
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN L KL F F ++
Sbjct: 56 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ KVTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 43/293 (14%)
Query: 50 FSPANKIGEGGSGTVYKGK-LKDGSIVAVKR-ARKNKHDKCLLLEFKNEILTWSKIEHLN 107
FS +IG G G VY + +++ +VA+K+ + K + E+ K+ H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 108 LVKLFGFLEHGDERIIVVEY-VGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++ G +V+EY +G+ + + + +E+A A+ L YLH+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL---QGLAYLHS 133
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++ +IHRDVKA NIL++E K+ DFG A ++ + GT ++ P+ +
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVI 183
Query: 227 RTY---QLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGDAILVMD 283
Q K DV+S G+ +E+ E K P+ + M + A I
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELA------ERKPPL-------FNMNAMSALYHI---- 226
Query: 284 PRLRRTPA--SNMAVEKILGLADVCLAPTRQSRPTMKKCAEILWKIRKDFREK 334
+PA S E D CL Q RPT +E+L K R RE+
Sbjct: 227 -AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRER 274
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN L KL F F ++
Sbjct: 56 GRVMLVKHMETGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDN 114
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 115 SN-LYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 168
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ KVTDFGFA+ V + + GT YL P+ + + + D
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE-----FKNEILTWSKI 103
N+ +GEG G V KL + K A K + K L + EI +
Sbjct: 5 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H +++KL+ ++ DE I+V+EY GN L +++ R + A R + A+ Y
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRF--FQQIISAVEY 118
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H + I+HRD+K N+L+ E L K+ DFG + + + + + G+ Y P
Sbjct: 119 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAP 171
Query: 224 DYL--RTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ + + Y E DV+S GV+L M+ R P + +
Sbjct: 172 EVISGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDE 206
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 120 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F +G G GTVYKG + +G VA+K R+ K
Sbjct: 12 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 69
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 127 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 181 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE-----FKNEILTWSKI 103
N+ +GEG G V KL + K A K + K L + EI +
Sbjct: 9 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 65
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H +++KL+ ++ DE I+V+EY GN L +++ R + A R + A+ Y
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRF--FQQIISAVEY 122
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H + I+HRD+K N+L+ E L K+ DFG + + + + + G+ Y P
Sbjct: 123 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAP 175
Query: 224 DYL--RTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ + + Y E DV+S GV+L M+ R P + +
Sbjct: 176 EVISGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDE 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE-----FKNEILTWSKI 103
N+ +GEG G V KL + K A K + K L + EI +
Sbjct: 14 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 70
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H +++KL+ ++ DE I+V+EY GN L +++ R + A R + A+ Y
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRF--FQQIISAVEY 127
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H + I+HRD+K N+L+ E L K+ DFG + + + + + G+ Y P
Sbjct: 128 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAP 180
Query: 224 DYL--RTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ + + Y E DV+S GV+L M+ R P + +
Sbjct: 181 EVISGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDE 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 108
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 219
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 114
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 225
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN-- 107
+S +IG GGS V++ + I A+K + D L ++NEI +K++ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+++L+ + E D+ I +V GN L L + ++ ER ++ A+ +H +
Sbjct: 118 IIRLYDY-EITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+H D+K +N LI + + K+ DFG A + D+ +QV G Y+ P+ ++
Sbjct: 175 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GAVNYMPPEAIK 229
Query: 228 TYQLTEKS-----------DVYSFGVLLVEMMTGRYPIE 255
+ ++ DV+S G +L M G+ P +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 56 IGEGGSGTV-YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
IG GG V + G +VA+K KN L K EI + H ++ +L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 115 LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIH 174
LE ++ +V+EY G L +++ + + L E + + A+ Y+H+ H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQG---YAH 131
Query: 175 RDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL--RTYQLT 232
RD+K N+L E + K+ DFG + + H+ T G+ Y P+ + ++Y L
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTCC-GSLAYAAPELIQGKSY-LG 188
Query: 233 EKSDVYSFGVLLVEMMTGRYPIES-------KKPIKERVTI-RWAMQCLKAGDAILVMDP 284
++DV+S G+LL +M G P + KK ++ + + +W + +IL++
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWL-----SPSSILLLQQ 243
Query: 285 RLRRTPASNMAVEKILG 301
L+ P ++++ +L
Sbjct: 244 MLQVDPKKRISMKNLLN 260
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 116
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 227
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 93
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 204
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 118
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 229
Query: 224 DYL-RTYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ R+ + EI + H ++V
Sbjct: 52 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE---------KMSMEISIHRSLAHQHVV 102
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + YLH
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRNR- 159
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + E L K+ DFG A E D + + GT Y+ P+ L
Sbjct: 160 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKK 214
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + DV+S G ++ ++ G+ P E+
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+VKL +V+E + G L E + + E I + A++++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHM 122
Query: 165 HTYSDPPIIHRDVKASNILITEK---LRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
H D ++HRD+K N+L T++ L K+ DFGFAR+ D+ T Y
Sbjct: 123 H---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC---FTLHYA 176
Query: 222 DPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
P+ L E D++S GV+L M++G+ P +S
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ R+ + EI + H ++V
Sbjct: 54 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE---------KMSMEISIHRSLAHQHVV 104
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + YLH
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRNR- 161
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + E L K+ DFG A E D + + GT Y+ P+ L
Sbjct: 162 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKK 216
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + DV+S G ++ ++ G+ P E+
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F + G GTVYKG + +G VA+K R+ K
Sbjct: 12 NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 69
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I+ + + G L REH D G L
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 127 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 181 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE-----FKNEILTWSKI 103
N+ +GEG G V KL + K A K + K L + EI +
Sbjct: 15 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 71
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
H +++KL+ ++ DE I+V+EY GN L +++ R + A R + A+ Y
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRF--FQQIISAVEY 128
Query: 164 LHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
H + I+HRD+K N+L+ E L K+ DFG + + + + + G+ Y P
Sbjct: 129 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAP 181
Query: 224 DYL--RTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
+ + + Y E DV+S GV+L M+ R P + +
Sbjct: 182 EVISGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDE 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
NE K+ +V L E D +V+ + G L+ H+ G G A + A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L LH I++RD+K NIL+ + +++D G A E I +V
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRV 346
Query: 215 KGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESK-------------KPIK 261
GT GY+ P+ ++ + T D ++ G LL EM+ G+ P + + K +
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 262 ERVTIRWAMQCLKAGDAILVMDPRLR 287
E + R++ Q +L DP R
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAER 431
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ R+ + EI + H ++V
Sbjct: 28 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE---------KMSMEISIHRSLAHQHVV 78
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + YLH
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRNR- 135
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + E L K+ DFG A E D + + GT Y+ P+ L
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKK 190
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + DV+S G ++ ++ G+ P E+
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFET 217
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
NE K+ +V L E D +V+ + G L+ H+ G G A + A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L LH I++RD+K NIL+ + +++D G A E I +V
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRV 346
Query: 215 KGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESK-------------KPIK 261
GT GY+ P+ ++ + T D ++ G LL EM+ G+ P + + K +
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 262 ERVTIRWAMQCLKAGDAILVMDPRLR 287
E + R++ Q +L DP R
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAER 431
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 124/301 (41%), Gaps = 47/301 (15%)
Query: 34 TTINFSFEEIYKATENFS-------PANKIGEGGSGTVYKGK-LKDGSIVAVKRAR---K 82
TT N F+ A ENF P ++G G G V K + + G I AVKR R
Sbjct: 16 TTENLYFQ---GAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVN 72
Query: 83 NKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRG 141
++ K LL + ++ ++ V +G L GD + + + + +L +
Sbjct: 73 SQEQKRLLXDLD---ISXRTVDCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVI 127
Query: 142 GNGLELAERL--DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR 199
G + E + IA+ + AL +LH S +IHRDVK SN+LI + K DFG +
Sbjct: 128 DKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISG 185
Query: 200 MSEEDSAVSHISTQVKGTAGYLDPDY----LRTYQLTEKSDVYSFGVLLVEMMTGRYPIE 255
+D A I G Y P+ L + KSD++S G+ +E+ R+P +
Sbjct: 186 YLVDDVA-KDIDA---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
Query: 256 SKKPIKERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRP 315
S W + + P+L PA + E + CL + RP
Sbjct: 242 S-----------WGTPFQQLKQVVEEPSPQL---PADKFSAE-FVDFTSQCLKKNSKERP 286
Query: 316 T 316
T
Sbjct: 287 T 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F + G GTVYKG + +G VA+K R+ K
Sbjct: 5 NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 62
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 120 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 174 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKLFGFLEHG 118
G ++ VK H +L+ K +++ +IEH LN LVKL +
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 119 DERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVK 178
+V+EY G + HL R G E R A + YLH+ +I+RD+K
Sbjct: 114 SNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 179 ASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
N++I ++ KVTDFG A+ V + + GT YL P+ + + + D +
Sbjct: 169 PENLMIDQQGYIKVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 239 SFGVLLVEMMTGRYPIESKKPIK 261
+ GVL+ EM G P + +PI+
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 85
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 196
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 159
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 270
Query: 224 DYL-RTYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 37 NFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGS----IVAVKRARKNKHDKCLLL 91
N + I K TE F + G GTVYKG + +G VA+K R+ K
Sbjct: 12 NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK- 69
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTL----REHLDGRGGNGLEL 147
E +E + +++ ++ +L G ++I + + G L REH D G L
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
L+ + +A + YL D ++HRD+ A N+L+ K+TDFG A++ +
Sbjct: 127 ---LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 208 SHIS---TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
H +K A L+ R Y T +SDV+S+GV + E+MT
Sbjct: 181 YHAEGGKVPIKWMA--LESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 56 IGEGGSGTVYKGK-----LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+G G G V+K + LK + + R K+K E KNEI ++++H NL++
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE------EVKNEISVMNQLDHANLIQ 150
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ E ++ ++V+EYV G L + + N EL L + + + ++H
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK-QICEGIRHMHQMY-- 207
Query: 171 PIIHRDVKASNILITEK--LRAKVTDFGFARM--SEEDSAVSHISTQVKGTAGYLDPDYL 226
I+H D+K NIL + + K+ DFG AR E V+ GT +L P+ +
Sbjct: 208 -ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF------GTPEFLAPEVV 260
Query: 227 RTYQLTEKSDVYSFGVLLVEMMTGRYPI---ESKKPIKERVTIRWAMQ 271
++ +D++S GV+ +++G P + + + RW ++
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE 308
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 20/252 (7%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
N+ IG+G V + + G VAVK K + + L + E+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
+VKLF +E +V EY G + ++L G E R + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG-RXKEKEARAKFR-QIVSAVQYCHQK 132
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+KA N+L+ K+ DFGF+ + + G Y P+ +
Sbjct: 133 F---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC----GAPPYAAPELFQ 185
Query: 228 TYQLT-EKSDVYSFGVLLVEMMTGRYPIESK--KPIKERV-------TIRWAMQCLKAGD 277
+ + DV+S GV+L +++G P + + K ++ERV + C
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLK 245
Query: 278 AILVMDPRLRRT 289
L+++P R T
Sbjct: 246 KFLILNPSKRGT 257
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDERII-----VVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ + V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ + K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK-------AFKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 39/248 (15%)
Query: 45 KATENFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
+ +F +G+G G V K + D A+K+ R + +L +E++ + +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL---SEVMLLASL 59
Query: 104 EHL-------------NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
H N VK ++ I +EY NGTL + + N + E
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-QRDEY 118
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
+ + AL+Y+H+ IIHRD+K NI I E K+ DFG A+ + +
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 211 STQ-----------VKGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESKK 258
+Q GTA Y+ + L T EK D+YS G++ EM+ YP +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG- 231
Query: 259 PIKERVTI 266
ERV I
Sbjct: 232 --MERVNI 237
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ + K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK-------AFKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS+I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 108 LVKLFGFLEHGDE-RIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++ ++ + HG +I++E + G L + RG E +I D+ A+ +LH+
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 167 YSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRDVK N+L T K + K+TDFGFA+ + +++ + T Y+ P
Sbjct: 128 HN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAP 179
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ L + + D++S GV++ ++ G P S
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 212
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 114
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 225
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 92
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 203
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRY 81
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 192
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 108 LVKLFGFLEHGDE-RIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++ ++ + HG +I++E + G L + RG E +I D+ A+ +LH+
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 167 YSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRDVK N+L T K + K+TDFGFA+ + +++ + T Y+ P
Sbjct: 147 HN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAP 198
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ L + + D++S GV++ ++ G P S
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 88
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 199
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 99
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 210
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRY 92
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 203
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ R+ + EI + H ++V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE---------KMSMEISIHRSLAHQHVV 80
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + YLH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRNR- 137
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + E L K+ DFG A E D + GT Y+ P+ L
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAPEVLSKK 192
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + DV+S G ++ ++ G+ P E+
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ R+ + EI + H ++V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE---------KMSMEISIHRSLAHQHVV 80
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + YLH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRNR- 137
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + E L K+ DFG A E D + GT Y+ P+ L
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAPEVLSKK 192
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + DV+S G ++ ++ G+ P E+
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ ++K FKN E+ K++H N+V+L +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRY 84
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 195
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ R+ + EI + H ++V
Sbjct: 34 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE---------KMSMEISIHRSLAHQHVV 84
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + YLH
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-QIVLGCQYLHRNR- 141
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + E L K+ DFG A E D + GT Y+ P+ L
Sbjct: 142 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAPEVLSKK 196
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + DV+S G ++ ++ G+ P E+
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR--MSEEDSAVSHISTQ 213
++A L +LH+ II+RD+K NIL+ E+ K+TDFG ++ + E A S
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--- 191
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTI----RWA 269
GT Y+ P+ + + +D +S+GVL+ EM+TG P + K KE +T+ +
Sbjct: 192 --GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDR-KETMTLILKAKLG 248
Query: 270 MQCLKAGDAILVMDPRLRRTPASNMA 295
M + +A ++ +R PA+ +
Sbjct: 249 MPQFLSTEAQSLLRALFKRNPANRLG 274
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+ E +G Y K+ ++ K D+ +N +L S+ L +K + F
Sbjct: 167 VKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALK-YSFQ 218
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHR 175
H D V+EY G L HL R E R ++ AL YLH S+ +++R
Sbjct: 219 TH-DRLCFVMEYANGGELFFHL-SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYR 273
Query: 176 DVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKS 235
D+K N+++ + K+TDFG + +D A GT YL P+ L
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAV 330
Query: 236 DVYSFGVLLVEMMTGRYPI 254
D + GV++ EMM GR P
Sbjct: 331 DWWGLGVVMYEMMCGRLPF 349
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 72 GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEH-LN------------LVKL-FGFLEH 117
G ++ VK H +L+ K +++ +IEH LN LVKL F F ++
Sbjct: 55 GRVMLVKHMETGNHYAMKILD-KQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 118 GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDV 177
+ +V+EY G + HL R G E R A + YLH+ +I+RD+
Sbjct: 114 SN-LYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDL 167
Query: 178 KASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDV 237
K N++I ++ +VTDFG A+ V + + GT YL P+ + + + D
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 238 YSFGVLLVEMMTGRYPIESKKPIK 261
++ GVL+ EM G P + +PI+
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+ E +G Y K+ ++ K D+ +N +L S+ L +K + F
Sbjct: 170 VKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALK-YSFQ 221
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHR 175
H D V+EY G L HL R E R ++ AL YLH S+ +++R
Sbjct: 222 TH-DRLCFVMEYANGGELFFHL-SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYR 276
Query: 176 DVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKS 235
D+K N+++ + K+TDFG + +D A GT YL P+ L
Sbjct: 277 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAV 333
Query: 236 DVYSFGVLLVEMMTGRYPI 254
D + GV++ EMM GR P
Sbjct: 334 DWWGLGVVMYEMMCGRLPF 352
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 40 FEEIYKATENFSPANKIGEGGSGTVYKGKLK--DGSIV--AVKRARKNKHDKCLLLEFKN 95
E++ + F+ +G+G G+V + +LK DGS V AVK + + + EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDER------IIVVEYVGNGTLREHL----DGRGGNGL 145
E + +H ++ KL G + ++++ ++ +G L L G L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 146 ELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDS 205
L + +D+A + YL + + IHRD+ A N ++ E + V DFG +R
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSR------ 185
Query: 206 AVSHISTQVKGTAGYLDPDYLRTYQL-----TEKSDVYSFGVLLVEMMT-GRYP 253
+ +G A L +L L T SDV++FGV + E+MT G+ P
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKCLLL-EF 93
+NF EI +A IG+G G V + D + A+K K K C+ E
Sbjct: 12 VNFDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQK---CVERNEV 59
Query: 94 KN---EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
+N E+ +EH LV L+ + ++ +VV+ + G LR HL + + E +
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVK 118
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
L I ++ AL YL IIHRD+K NIL+ E +TDF A M ++ +
Sbjct: 119 LFIC-ELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI--- 171
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKS---DVYSFGVLLVEMMTGRYP 253
T + GT Y+ P+ + + S D +S GV E++ GR P
Sbjct: 172 -TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKR--ARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+G+G G VY G+ L + +A+K R +++ + L EI ++H N+V+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL----HEEIALHKHLKHKNIVQYL 85
Query: 113 G-FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI-DVAHALTYLHTYSDP 170
G F E+G +I + E V G+L L + G + + + + L YLH D
Sbjct: 86 GSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DN 141
Query: 171 PIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL--- 226
I+HRD+K N+LI T K++DFG S+ + ++ + GT Y+ P+ +
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFG---TSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 227 -RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
R Y + +D++S G ++EM TG+ P
Sbjct: 199 PRGY--GKAADIWSLGCTIIEMATGKPPF 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 145
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHIS-TQVKGTAGYLDPDYLRTYQLTEKSDV 237
+L T K K+TDFGFA+ SH S T+ T Y+ P+ L + + D+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 238 YSFGVLLVEMMTGRYPIES 256
+S GV++ ++ G P S
Sbjct: 201 WSLGVIMYILLCGYPPFYS 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E++ IG G G K + K DG I+ K + +E+ +++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 107 NLVKLFG-FLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAER--LDIAIDVAHALT 162
N+V+ + ++ + + IV+EY G L + L E L + + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 163 YLHTYSDP--PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
H SD ++HRD+K +N+ + K K+ DFG AR+ D++ + GT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV---GTPYY 182
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEM 247
+ P+ + EKSD++S G LL E+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E++ IG G G K + K DG I+ K + +E+ +++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 107 NLVKLFG-FLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAER--LDIAIDVAHALT 162
N+V+ + ++ + + IV+EY G L + L E L + + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 163 YLHTYSDP--PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
H SD ++HRD+K +N+ + K K+ DFG AR+ D++ + GT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKAFVGTPYY 182
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEM 247
+ P+ + EKSD++S G LL E+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 53 ANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLL-EFKNEILTWSKIEHLNLVK 110
+ +G G G V GK + G VAVK + K ++ + + EI H +++K
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ + + +V+EYV G L +++ G L+ E + + + Y H +
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 171 PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL--RT 228
++HRD+K N+L+ + AK+ DFG + M + + G+ Y P+ + R
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC----GSPNYAAPEVISGRL 191
Query: 229 YQLTEKSDVYSFGVLLVEMMTGRYPIE 255
Y E D++S GV+L ++ G P +
Sbjct: 192 YAGPE-VDIWSSGVILYALLCGTLPFD 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKR--ARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
+G+G G VY G+ L + +A+K R +++ + L EI ++H N+V+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL----HEEIALHKHLKHKNIVQYL 71
Query: 113 G-FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI-DVAHALTYLHTYSDP 170
G F E+G +I + E V G+L L + G + + + + L YLH D
Sbjct: 72 GSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DN 127
Query: 171 PIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL--- 226
I+HRD+K N+LI T K++DFG S+ + ++ + GT Y+ P+ +
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFG---TSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 227 -RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
R Y + +D++S G ++EM TG+ P
Sbjct: 185 PRGY--GKAADIWSLGCTIIEMATGKPPF 211
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+ E +G Y K+ ++ K D+ +N +L S+ L +K + F
Sbjct: 29 VKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALK-YSFQ 80
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHR 175
H D V+EY G L HL R E R ++ AL YLH S+ +++R
Sbjct: 81 TH-DRLCFVMEYANGGELFFHL-SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYR 135
Query: 176 DVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKS 235
D+K N+++ + K+TDFG + +D A GT YL P+ L
Sbjct: 136 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---GTPEYLAPEVLEDNDYGRAV 192
Query: 236 DVYSFGVLLVEMMTGRYPI 254
D + GV++ EMM GR P
Sbjct: 193 DWWGLGVVMYEMMCGRLPF 211
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
L +L + D V+EYV G L H+ G + + A ++A L +L +
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK 461
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
II+RD+K N+++ + K+ DFG M +E+ + GT Y+ P+ +
Sbjct: 462 G---IIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTKXFCGTPDYIAPEII- 514
Query: 228 TYQLTEKS-DVYSFGVLLVEMMTGRYPIESK 257
YQ KS D ++FGVLL EM+ G+ P E +
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+ E +G Y K+ ++ K D+ +N +L S+ L +K + F
Sbjct: 28 VKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALK-YSFQ 79
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHR 175
H D V+EY G L HL R E R ++ AL YLH S+ +++R
Sbjct: 80 TH-DRLCFVMEYANGGELFFHL-SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYR 134
Query: 176 DVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKS 235
D+K N+++ + K+TDFG + +D A GT YL P+ L
Sbjct: 135 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---GTPEYLAPEVLEDNDYGRAV 191
Query: 236 DVYSFGVLLVEMMTGRYPI 254
D + GV++ EMM GR P
Sbjct: 192 DWWGLGVVMYEMMCGRLPF 210
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 153
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 154 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 209
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 210 SLGVIMYILLCGYPPFYS 227
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKN-EILTWSKIEHLNLVKL-F 112
IG G G VY+ KL D G +VA+K+ + K FKN E+ K++H N+V+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK-------AFKNRELQIMRKLDHCNIVRLRY 80
Query: 113 GFLEHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLH 165
F G+++ +V++YV R H R L + + +L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 166 TYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDP 223
++ I HRD+K N+L+ + K+ DFG A+ + + VS I ++ Y P
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 224 DYLR-TYQLTEKSDVYSFGVLLVEMMTGR 251
+ + T DV+S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 161
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 162 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 217
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 218 SLGVIMYILLCGYPPFYS 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+ E +G Y K+ ++ K D+ +N +L S+ L +K + F
Sbjct: 27 VKEKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALK-YSFQ 78
Query: 116 EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHR 175
H D V+EY G L HL R E R ++ AL YLH S+ +++R
Sbjct: 79 TH-DRLCFVMEYANGGELFFHL-SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYR 133
Query: 176 DVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKS 235
D+K N+++ + K+TDFG + +D A GT YL P+ L
Sbjct: 134 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---GTPEYLAPEVLEDNDYGRAV 190
Query: 236 DVYSFGVLLVEMMTGRYPI 254
D + GV++ EMM GR P
Sbjct: 191 DWWGLGVVMYEMMCGRLPF 209
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 151
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 152 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 207
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 208 SLGVIMYILLCGYPPFYS 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 191
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 247
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 248 SLGVIMYILLCGYPPFYS 265
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 152
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 208
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 209 SLGVIMYILLCGYPPFYS 226
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 147
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 203
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 204 SLGVIMYILLCGYPPFYS 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 101/207 (48%), Gaps = 8/207 (3%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
++G G G+V +G +++ I + K +K E E ++++ +V+L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + ++V+E G G L + L G+ + ++ ++ V+ + YL +
Sbjct: 77 GVCQ-AEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLE---EKNF 131
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HRD+ A N+L+ + AK++DFG ++ D + + K + P+ + + +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 233 EKSDVYSFGVLLVEMMT-GRYPIESKK 258
+SDV+S+GV + E ++ G+ P + K
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ K
Sbjct: 25 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY 81
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + +D
Sbjct: 138 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMTG 193
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+++T+ Y P+ + + + D++S G ++ E++TGR
Sbjct: 194 YVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 146
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 147 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 202
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 203 SLGVIMYILLCGYPPFYS 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 41/269 (15%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARKNKHDKCLLLEFKNEILTWS 101
I ++ + IG G G + K + +VAVK + + + K EI+
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK---IAANVKREIINHR 70
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA----ERLDIAIDV 157
+ H N+V+ + IV+EY G L E + G + A ++L +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILI--TEKLRAKVTDFGFARMSEEDSAVSHISTQ-V 214
HA+ + HRD+K N L+ + R K+ DFG+++ S+V H +
Sbjct: 131 CHAMQ---------VCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKST 176
Query: 215 KGTAGYLDPDYLRTYQLTEK-SDVYSFGVLLVEMMTGRYPIES-------KKPIKERVTI 266
GT Y+ P+ L + K +DV+S GV L M+ G YP E +K I + +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 267 RWAM--------QCLKAGDAILVMDPRLR 287
++A+ +C I V DP R
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 197
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 198 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 253
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 254 SLGVIMYILLCGYPPFYS 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 49 NFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKC-LLLEFKNEILTWSKIEHL 106
++ + +G G G V G+ + G VAVK + K ++ + K EI H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+++KL+ + + +V+EYV G L +++ G +E E + + A+ Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHR 129
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+L+ + AK+ DFG + M + + G+ Y P+ +
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC----GSPNYAAPEVI 182
Query: 227 --RTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
R Y E D++S GV+L ++ G P + +
Sbjct: 183 SGRLYAGPE-VDIWSCGVILYALLCGTLPFDDE 214
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 9 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 174
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 9 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 65
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++ A
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA-- 176
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + + D++S G ++ E++TGR
Sbjct: 177 ----GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 145
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 201
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 202 SLGVIMYILLCGYPPFYS 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 147
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 203
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 204 SLGVIMYILLCGYPPFYS 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 49 NFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKC-LLLEFKNEILTWSKIEHL 106
++ + +G G G V G+ + G VAVK + K ++ + K EI H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+++KL+ + + +V+EYV G L +++ G +E E + + A+ Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHR 129
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
+ ++HRD+K N+L+ + AK+ DFG + M D S G+ Y P+ +
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC---GSPNYAAPEVI 182
Query: 227 --RTYQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
R Y E D++S GV+L ++ G P + +
Sbjct: 183 SGRLYAGPE-VDIWSCGVILYALLCGTLPFDDE 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 49/273 (17%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKR-ARKNKHDKCLLLEFKNEILTW 100
I ++ + IG G G + K + +VAVK R K D+ + K EI+
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENV----KREIINH 69
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA----ERLDIAID 156
+ H N+V+ + IV+EY G L E + G + A ++L +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILI--TEKLRAKVTDFGFARMS----EEDSAVSHI 210
AHA+ + HRD+K N L+ + R K+ DFG+++ S + SAV
Sbjct: 130 YAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV--- 177
Query: 211 STQVKGTAGYLDPDYLRTYQLTEK-SDVYSFGVLLVEMMTGRYPIES-------KKPIKE 262
GT Y+ P+ L + K +DV+S GV L M+ G YP E +K I
Sbjct: 178 -----GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
Query: 263 RVTIRWAM--------QCLKAGDAILVMDPRLR 287
+ +++A+ +C I V DP R
Sbjct: 233 ILNVQYAIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 94 KNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDI 153
+ EI+ + H N+V+ + I++EY G L E + G E R
Sbjct: 64 QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEARFFF 122
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILI--TEKLRAKVTDFGFARMSEEDSAVSHIS 211
+ ++Y H+ I HRD+K N L+ + R K+ DFG+++ S+V H
Sbjct: 123 Q-QLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQ 173
Query: 212 TQ-VKGTAGYLDPDYLRTYQLTEK-SDVYSFGVLLVEMMTGRYPIES-------KKPIKE 262
+ GT Y+ P+ L + K +DV+S GV L M+ G YP E +K I+
Sbjct: 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233
Query: 263 RVTIRWAM--------QCLKAGDAILVMDPRLR 287
+++++++ +C I V DP R
Sbjct: 234 ILSVKYSIPDDIRISPECCHLISRIFVADPATR 266
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++ A
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA-- 180
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + + D++S G ++ E++TGR
Sbjct: 181 ----GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++ A
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA-- 180
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + + D++S G ++ E++TGR
Sbjct: 181 ----GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 28/239 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNK-HDKC 88
G ++ FE++YK T +GEG V L++G AVK K H +
Sbjct: 1 GSTDSLPGKFEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS 55
Query: 89 LLLEFKNEILTWSKIE-HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLEL 147
+ E+ T + + + N+++L F E +V E + G++ H+ +
Sbjct: 56 RVF---REVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNERE 112
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILI--TEKLR-AKVTDFGFARMSEED 204
A R + DVA AL +LHT I HRD+K NIL EK+ K+ DF + +
Sbjct: 113 ASR--VVRDVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLN 167
Query: 205 SAVSHIS----TQVKGTAGYLDPDYLRTY--QLT---EKSDVYSFGVLLVEMMTGRYPI 254
++ + I+ T G+A Y+ P+ + + Q T ++ D++S GV+L M++G P
Sbjct: 168 NSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 19 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 75
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 132 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 184
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
+G+G + V++G+ K G + A+K + + ++ + E K+ H N+VKLF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLFAI 75
Query: 115 LEHGDER--IIVVEYVGNGTLREHLD-GRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
E R ++++E+ G+L L+ GL +E L + DV + +L +
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132
Query: 172 IIHRDVKASNIL--ITEKLRA--KVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HR++K NI+ I E ++ K+TDFG AR E+D + GT YL PD
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF----VSLYGTEEYLHPDMYE 188
Query: 228 TYQLTEKS--------DVYSFGVLLVEMMTGRYPI 254
L + D++S GV TG P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 32 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 88
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 145 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 197
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 198 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 10/207 (4%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL 106
E++ IG G G K + K DG I+ K + +E+ +++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 107 NLVKLFG-FLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAER--LDIAIDVAHALT 162
N+V+ + ++ + + IV+EY G L + L E L + + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 163 YLHTYSDP--PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
H SD ++HRD+K +N+ + K K+ DFG AR+ D + + GT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD---EDFAKEFVGTPYY 182
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEM 247
+ P+ + EKSD++S G LL E+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVK----RARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+G+G G V K K G AVK R K K DK LL E+ +++H N++K
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL---REVQLLKQLDHPNIMK 96
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ F E +V E G L + + R A R I V +TY+H
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHK---N 151
Query: 171 PIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+K N+L+ K + ++ DFG + E A + ++ GTA Y+ P+ L
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKI-GTAYYIAPEVLH 207
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTGRYPI 254
TY EK DV+S GV+L +++G P
Sbjct: 208 GTYD--EKCDVWSTGVILYILLSGCPPF 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKR-ARKNKHDKCLLLEFKNEILTW 100
I ++ + IG G G + K + +VAVK R K D+ K EI+
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDE----NVKREIINH 68
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA----ERLDIAID 156
+ H N+V+ + IV+EY G L E + G + A ++L +
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILI--TEKLRAKVTDFGFARMSEEDSAVSHISTQ- 213
HA+ + HRD+K N L+ + R K+ DFG+++ S+V H +
Sbjct: 129 YCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKS 174
Query: 214 VKGTAGYLDPDYLRTYQLTEK-SDVYSFGVLLVEMMTGRYPIES-------KKPIKERVT 265
GT Y+ P+ L + K +DV+S GV L M+ G YP E +K I +
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 234
Query: 266 IRWAM--------QCLKAGDAILVMDPRLR 287
+++A+ +C I V DP R
Sbjct: 235 VQYAIPDYVHISPECRHLISRIFVADPAKR 264
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVK----RARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+G+G G V K K G AVK R K K DK LL E+ +++H N++K
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL---REVQLLKQLDHPNIMK 90
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ F E +V E G L + + R A R I V +TY+H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHK---N 145
Query: 171 PIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+K N+L+ K + ++ DFG + E A + ++ GTA Y+ P+ L
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKI-GTAYYIAPEVLH 201
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTGRYPI 254
TY EK DV+S GV+L +++G P
Sbjct: 202 GTYD--EKCDVWSTGVILYILLSGCPPF 227
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 33 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 146 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 198
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 199 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP IG G G+V K G VAVK+ +
Sbjct: 18 LNKTIWEVPERYQNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 131 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---- 183
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 11 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 67
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 123
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 124 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 176
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 177 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 56 IGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
+G+G + V++G+ K G + A+K + + ++ + E K+ H N+VKLF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLFAI 75
Query: 115 LEHGDER--IIVVEYVGNGTLREHLD-GRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
E R ++++E+ G+L L+ GL +E L + DV + +L +
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132
Query: 172 IIHRDVKASNIL--ITEKLRA--KVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HR++K NI+ I E ++ K+TDFG AR E+D + GT YL PD
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF----VXLYGTEEYLHPDMYE 188
Query: 228 TYQLTEKS--------DVYSFGVLLVEMMTGRYPI 254
L + D++S GV TG P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 9 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 65
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 174
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
L +L + D V+EYV G L H+ G + + A ++A L +L +
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK 140
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
II+RD+K N+++ + K+ DFG + + D + GT Y+ P+ +
Sbjct: 141 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---GTPDYIAPEII- 193
Query: 228 TYQLTEKS-DVYSFGVLLVEMMTGRYPIESK 257
YQ KS D ++FGVLL EM+ G+ P E +
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 101/207 (48%), Gaps = 8/207 (3%)
Query: 55 KIGEGGSGTVYKG--KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
++G G G+V +G +++ I + K +K E E ++++ +V+L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
G + + ++V+E G G L + L G+ + ++ ++ V+ + YL +
Sbjct: 403 GVCQ-AEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN---F 457
Query: 173 IHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLT 232
+HR++ A N+L+ + AK++DFG ++ D + + K + P+ + + +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 233 EKSDVYSFGVLLVEMMT-GRYPIESKK 258
+SDV+S+GV + E ++ G+ P + K
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 18 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 131 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 183
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 18 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 131 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 183
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 12 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 68
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 124
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 125 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 177
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 178 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 10 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 123 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 175
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 176 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 15 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 128 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 180
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 181 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 10 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 123 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 175
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 176 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 32 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 88
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 145 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 197
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 198 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 20 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 133 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 185
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 24 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + +D
Sbjct: 137 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMTG 192
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+++T+ Y P+ + + + D++S G ++ E++TGR
Sbjct: 193 YVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 15 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 128 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 180
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 181 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 19 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 132 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 184
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 25 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 138 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 190
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 191 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 25 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 138 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 190
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 191 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 36 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + +D
Sbjct: 149 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMTG 204
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+++T+ Y P+ + + + D++S G ++ E++TGR
Sbjct: 205 YVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 15 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 128 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 180
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 181 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVK----RARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+G+G G V K K G AVK R K K DK LL E+ +++H N++K
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL---REVQLLKQLDHPNIMK 113
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ F E +V E G L + + R A R I V +TY+H
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHK---N 168
Query: 171 PIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+K N+L+ K + ++ DFG + E A + ++ GTA Y+ P+ L
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKI-GTAYYIAPEVLH 224
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTGRYPI 254
TY EK DV+S GV+L +++G P
Sbjct: 225 GTYD--EKCDVWSTGVILYILLSGCPPF 250
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 33 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 89
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 146 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 198
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 199 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 75 VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLR 134
V KR K K DK LL E+ +++H N++KL+ F E +V E G L
Sbjct: 82 VISKRQVKQKTDKESLL---REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 135 EHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLR---AK 191
+ + R A R I V +TY+H I+HRD+K N+L+ K + +
Sbjct: 139 DEIISRKRFSEVDAAR--IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIR 193
Query: 192 VTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLVEMMTG 250
+ DFG + E A + ++ GTA Y+ P+ L TY EK DV+S GV+L +++G
Sbjct: 194 IIDFGLSTHFE---ASKKMKDKI-GTAYYIAPEVLHGTYD--EKCDVWSTGVILYILLSG 247
Query: 251 RYPI 254
P
Sbjct: 248 CPPF 251
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ L + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 19 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 132 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 184
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWS 101
I++ E + + +G G G+V +K G +AVK+ + E+
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAI 155
++H N++ L +E + L HL G N + ++L +
Sbjct: 106 HMKHENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 161
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++ T
Sbjct: 162 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYV 212
Query: 216 GTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + D++S G ++ E++TGR
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 18 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 131 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---- 183
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 55/238 (23%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNE--ILTWSKIEHLNLVKLFG 113
IG G G VYKG L + + + N+ + F NE I +EH N+ +
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQN------FINEKNIYRVPLMEHDNIARFIV 74
Query: 114 FLEHGDERI---------IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
GDER+ +V+EY NG+L ++L + + +A V L YL
Sbjct: 75 ----GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR---LAHSVTRGLAYL 127
Query: 165 HT------YSDPPIIHRDVKASNILITEKLRAKVTDFGFA---------RMSEED-SAVS 208
HT + P I HRD+ + N+L+ ++DFG + R EED +A+S
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 209 HISTQVKGTAGYLDPDYLR-------TYQLTEKSDVYSFGVLLVEMM---TGRYPIES 256
+ GT Y+ P+ L ++ D+Y+ G++ E+ T +P ES
Sbjct: 188 EV-----GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 35/295 (11%)
Query: 49 NFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNL 108
+F P + +G G GT+ + D VAVKR +C + L EH N+
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP----ECFSFADREVQLLRESDEHPNV 80
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
++ F + + I +E TL+E+++ + L L E + + L +LH+ +
Sbjct: 81 IRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLHSLN 138
Query: 169 DPPIIHRDVKASNILITE-----KLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
I+HRD+K NILI+ K++A ++DFG + + V GT G++ P
Sbjct: 139 ---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 224 DYLR---TYQLTEKSDVYSFGVLLVEMMT-GRYPIESKKPIKERVTIRWAMQCLKAGDAI 279
+ L T D++S G + +++ G +P K ++ + I L ++
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF--GKSLQRQANI------LLGACSL 247
Query: 280 LVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKKCAE--ILWKIRKDFR 332
+ P + +EK++ + Q RP+ K + W + K +
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMDP-------QKRPSAKHVLKHPFFWSLEKQLQ 295
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E + L + + RG ELA V A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 133
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 134 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 185
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 243
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 24 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + +D
Sbjct: 137 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHT-DDEMTG 192
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+++T+ Y P+ + + + D++S G ++ E++TGR
Sbjct: 193 YVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N +P +G G G+V K G VAVK+ +
Sbjct: 23 LNKTIWEVPERYQNLAP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 79
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 135
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 136 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---- 188
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 189 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 39/244 (15%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHL- 106
+F +G+G G V K + D A+K+ R + +L +E++ + + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL---SEVMLLASLNHQY 63
Query: 107 ------------NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
N VK ++ I +EY N TL + + N + E +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ-QRDEYWRLF 122
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ- 213
+ AL+Y+H+ IIHRD+K NI I E K+ DFG A+ + + +Q
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 214 ----------VKGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKE 262
GTA Y+ + L T EK D+YS G++ EM+ YP + E
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTG---ME 233
Query: 263 RVTI 266
RV I
Sbjct: 234 RVNI 237
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 94 KNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDI 153
+NEI KI+H N+V L E + +V++ V G L + + +G + A L
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL-- 125
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILI---TEKLRAKVTDFGFARMSEEDSAVSHI 210
V A+ YLH I+HRD+K N+L E+ + ++DFG ++M + +S
Sbjct: 126 IRQVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA 182
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
GT GY+ P+ L ++ D +S GV+ ++ G P
Sbjct: 183 C----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 36 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + +D
Sbjct: 149 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMXG 204
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+++T+ Y P+ + + + D++S G ++ E++TGR
Sbjct: 205 YVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 20 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + ++
Sbjct: 133 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE---- 185
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 20 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + ++
Sbjct: 133 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE---- 185
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 20 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + ++
Sbjct: 133 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE---- 185
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 149
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 201
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 259
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 27/282 (9%)
Query: 46 ATENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKN---KHDKCLLLEFKNEILTWS 101
E+ +IG G G+V K K G I+AVKR R K K LL++ + ++ S
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL-DVVMRSS 78
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHAL 161
++ V+ +G L + I +E + + + + E + I +A
Sbjct: 79 DCPYI--VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 162 TYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYL 221
H + IIHRD+K SNIL+ K+ DFG + + A T+ G Y+
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA----KTRDAGCRPYM 192
Query: 222 DPDYLRTYQLTE----KSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIRWAMQCLKAGD 277
P+ + + +SDV+S G+ L E+ TGR+P + +++T Q +K GD
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT-----QVVK-GD 246
Query: 278 AILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK 319
P+L + + + ++CL RP K+
Sbjct: 247 P-----PQLSNSEEREFS-PSFINFVNLCLTKDESKRPKYKE 282
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWS 101
I++ E + + +G G G+V K G VAVK+ + E+
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 102 KIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IAI 155
++H N++ L +E + L HL G N + +L +
Sbjct: 73 HMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIY 128
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++ T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MTGYV 179
Query: 216 GTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + + D++S G ++ E++TGR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
L +L + D V+EYV G L H+ G + + + A +++ L +LH
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLHKR 139
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
II+RD+K N+++ + K+ DFG + D + + GT Y+ P+ +
Sbjct: 140 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR---EFCGTPDYIAPEII- 192
Query: 228 TYQLTEKS-DVYSFGVLLVEMMTGRYPIESK 257
YQ KS D +++GVLL EM+ G+ P + +
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 161
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 213
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 271
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 33 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 89
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR + +D
Sbjct: 146 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMXG 201
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
++T+ Y P+ + + + D++S G ++ E++TGR
Sbjct: 202 XVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 148
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 149 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 200
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 258
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 148
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 149 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 200
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 258
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 15 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 128 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---- 180
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 181 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 162
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 214
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 272
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 162
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 214
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 272
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 161
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 213
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 149
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 201
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 162
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 214
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 272
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 149
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 201
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 161
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 213
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 271
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 162
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 163 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 214
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 272
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 161
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 162 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 213
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 176
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 177 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 228
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 286
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 19 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG AR ++++
Sbjct: 132 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---- 184
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 181
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 182 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 233
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 291
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 176
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 177 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 228
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 286
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTW 100
+++ ++ + IGEG G V + VA+K+ +H + EI
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKIL 95
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------IA 154
+ H N++ + + R +E + + L HL G L + L
Sbjct: 96 LRFRHENIIGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 215 KGTAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 168
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 169 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 220
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 278
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 26/285 (9%)
Query: 45 KATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
K ++N+ ++G+G V + K G A K K + + E K+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N+V+L ++ +V + V G L E + R A+ + ++ Y
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAY 120
Query: 164 LHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
H+ I+HR++K N+L+ K + K+ DFG A + DS H GT GY
Sbjct: 121 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWH---GFAGTPGY 173
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR----------WAM 270
L P+ L+ ++ D+++ GV+L ++ G P + + I+ W
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 233
Query: 271 QCLKAG---DAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQ 312
+A D++L ++P+ R T + V I V A RQ
Sbjct: 234 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQ 278
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ D+G AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 134
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 135 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 186
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 134
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 135 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 186
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 26/285 (9%)
Query: 45 KATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
K ++N+ ++G+G V + K G A K K + + E K+
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N+V+L ++ +V + V G L E + R A+ + ++ Y
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAY 119
Query: 164 LHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
H+ I+HR++K N+L+ K + K+ DFG A + DS H GT GY
Sbjct: 120 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWH---GFAGTPGY 172
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR----------WAM 270
L P+ L+ ++ D+++ GV+L ++ G P + + I+ W
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 232
Query: 271 QCLKAG---DAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQ 312
+A D++L ++P+ R T + V I V A RQ
Sbjct: 233 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQ 277
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 133
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 134 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 185
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 134
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 135 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 186
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVK-RARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
+G+G G V++G L G VAVK + +++ E N +L + H N++ GF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL----LRHDNIL---GF 67
Query: 115 L-------EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH-- 165
+ + ++ Y +G+L + L + LE L +A+ A L +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT---LEPHLALRLAVSAACGLAHLHVE 124
Query: 166 ---TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-GTAGYL 221
T P I HRD K+ N+L+ L+ + D G A M + S I + GT Y+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 222 DPDYL----RT--YQLTEKSDVYSFGVLLVEM 247
P+ L RT ++ + +D+++FG++L E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 129
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 181
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 239
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 26/292 (8%)
Query: 38 FSFEEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNE 96
F K ++N+ ++G+G V + K G A K K + + E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 97 ILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAID 156
K++H N+V+L ++ +V + V G L E + R A+
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQ 136
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSAVSHISTQ 213
+ ++ Y H+ I+HR++K N+L+ K + K+ DFG A + DS H
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWH---G 189
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR------ 267
GT GYL P+ L+ ++ D+++ GV+L ++ G P + + I+
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 268 ----WAMQCLKAG---DAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQ 312
W +A D++L ++P+ R T + V I V A RQ
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQ 301
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLL-LEFKNEILTW 100
+Y + +F + +GEG G V K G IVA+K+ DK L L EI
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKIL 63
Query: 101 SKIEHLNLVKLFGF-----LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
+H N++ +F E+ +E I+ E + D ++ I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-------DLHRVISTQMLSDDHIQY 116
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSA-VSHISTQV 214
+ L + +IHRD+K SN+LI KV DFG AR+ +E +A S + Q
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 215 KGTAGYLDPDYLRTYQLTEKS-------DVYSFGVLLVEMMTGR 251
G Y+ + R ++ S DV+S G +L E+ R
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 132
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 133 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 184
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 242
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNC 129
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 181
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 239
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCHNX 129
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 181
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 239
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDVKPEN 191
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA+ E ++ + ++T T Y+ P+ L + + D +
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDXW 247
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV+ ++ G P S
Sbjct: 248 SLGVIXYILLCGYPPFYS 265
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLL----EFKNEILTWSKIE--HLNL 108
+G GG G+VY G ++ D VA+K K++ L E++ K+ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 109 VKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHNC 156
Query: 168 SDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
++HRD+K NILI + K+ DFG + ++ + T GT Y P+++
Sbjct: 157 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWI 208
Query: 227 RTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 77 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 130
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEVLEDNDY 187
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQ 213
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG------------NGLELAERL 151
HLN+V L G + G +++VE+ G L +L + + L L +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+ VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 152 XYSFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR-- 206
Query: 212 TQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 207 ---KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 72 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 125
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEVLEDNDY 182
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 72 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 125
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEVLEDNDY 182
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 72 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 125
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDNDY 182
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 45 KATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
K ++N+ ++G+G V + K G A K K + + E K+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N+V+L ++ +V + V G L E + R A+ + ++ Y
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAY 120
Query: 164 LHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
H+ I+HR++K N+L+ K + K+ DFG A + DS H GT GY
Sbjct: 121 CHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWH---GFAGTPGY 173
Query: 221 LDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
L P+ L+ ++ D+++ GV+L ++ G P
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 72 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 125
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---GTPEYLAPEVLEDNDY 182
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 72 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 125
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDNDY 182
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ F H D V+EY G L HL R E R ++ AL YLH+
Sbjct: 75 YAFQTH-DRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSALEYLHSRD--- 128
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
+++RD+K N+++ + K+TDFG + D A GT YL P+ L
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDNDY 185
Query: 232 TEKSDVYSFGVLLVEMMTGRYPIESK 257
D + GV++ EMM GR P ++
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQ 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG-------------NGLELAER 150
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 151 ICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR- 206
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVK----RARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+G+G G V K K G AVK R K K DK LL E+ +++H N+ K
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL---REVQLLKQLDHPNIXK 90
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ F E +V E G L + + R A R I V +TY H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXHK---N 145
Query: 171 PIIHRDVKASNILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
I+HRD+K N+L+ K + ++ DFG + E S GTA Y+ P+ L
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE----ASKKXKDKIGTAYYIAPEVLH 201
Query: 228 -TYQLTEKSDVYSFGVLLVEMMTGRYPI 254
TY EK DV+S GV+L +++G P
Sbjct: 202 GTYD--EKCDVWSTGVILYILLSGCPPF 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + +++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKSQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DFG R ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 41/263 (15%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKH--------DKCLLLEFKNEILTWSKIEHL 106
+G G G V + K VA+K K K D L +E + EIL K+ H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL--KKLNHP 75
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++K+ F + ++ IV+E + G L + + G L+ A + A+ YLH
Sbjct: 76 CIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH- 131
Query: 167 YSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+ IIHRD+K N+L++ E K+TDFG +++ E S + + GT YL P
Sbjct: 132 --ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----GTPTYLAP 185
Query: 224 DYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIKERVTI--------RWA 269
+ L T D +S GV+L ++G P ++ +K+++T WA
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 270 MQCLKAGDAI---LVMDPRLRRT 289
KA D + LV+DP+ R T
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFT 268
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 41/263 (15%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKH--------DKCLLLEFKNEILTWSKIEHL 106
+G G G V + K VA+K K K D L +E + EIL K+ H
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL--KKLNHP 74
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++K+ F + ++ IV+E + G L + + G L+ A + A+ YLH
Sbjct: 75 CIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH- 130
Query: 167 YSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+ IIHRD+K N+L++ E K+TDFG +++ E S + + GT YL P
Sbjct: 131 --ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----GTPTYLAP 184
Query: 224 DYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIKERVTI--------RWA 269
+ L T D +S GV+L ++G P ++ +K+++T WA
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 270 MQCLKAGDAI---LVMDPRLRRT 289
KA D + LV+DP+ R T
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFT 267
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 150 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 210 ISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 207 -KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG----------NGLELAERLDI 153
HLN+V L G + G +++VE+ G L +L + + L L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
+ VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 150 SFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGD 205
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 41/263 (15%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKH--------DKCLLLEFKNEILTWSKIEHL 106
+G G G V + K VA+K K K D L +E + EIL K+ H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL--KKLNHP 75
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++K+ F + ++ IV+E + G L + + G L+ A + A+ YLH
Sbjct: 76 CIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH- 131
Query: 167 YSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+ IIHRD+K N+L++ E K+TDFG +++ E S + + GT YL P
Sbjct: 132 --ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----GTPTYLAP 185
Query: 224 DYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIKERVTI--------RWA 269
+ L T D +S GV+L ++G P ++ +K+++T WA
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 270 MQCLKAGDAI---LVMDPRLRRT 289
KA D + LV+DP+ R T
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFT 268
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 41/263 (15%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKH--------DKCLLLEFKNEILTWSKIEHL 106
+G G G V + K VA+K K K D L +E + EIL K+ H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL--KKLNHP 75
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++K+ F + ++ IV+E + G L + + G L+ A + A+ YLH
Sbjct: 76 CIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH- 131
Query: 167 YSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
+ IIHRD+K N+L++ E K+TDFG +++ E S + + GT YL P
Sbjct: 132 --ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----GTPTYLAP 185
Query: 224 DYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIKERVTI--------RWA 269
+ L T D +S GV+L ++G P ++ +K+++T WA
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 270 MQCLKAGDAI---LVMDPRLRRT 289
KA D + LV+DP+ R T
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFT 268
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 91 LEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
L + EI K+ H ++K+ F + ++ IV+E + G L + + G L+ A
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATC 241
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAV 207
+ A+ YLH + IIHRD+K N+L++ E K+TDFG +++ E S +
Sbjct: 242 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298
Query: 208 SHISTQVKGTAGYLDPDYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIK 261
+ GT YL P+ L T D +S GV+L ++G P ++ +K
Sbjct: 299 RTLC----GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 354
Query: 262 ERVTI--------RWAMQCLKAGDAI---LVMDPRLRRT 289
+++T WA KA D + LV+DP+ R T
Sbjct: 355 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 393
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 141 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 210 ISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 198 -----KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 41/263 (15%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKH--------DKCLLLEFKNEILTWSKIEHL 106
+G G G V + K VA+K K K D L +E + EIL K+ H
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL--KKLNHP 81
Query: 107 NLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
++K+ F + ++ IV+E + G L + + G L+ A + A+ YLH
Sbjct: 82 CIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 167 YSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
IIHRD+K N+L++ E K+TDFG +++ E S + + GT YL P
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----GTPTYLAP 191
Query: 224 DYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIKERVTI--------RWA 269
+ L T D +S GV+L ++G P ++ +K+++T WA
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 270 MQCLKAGDAI---LVMDPRLRRT 289
KA D + LV+DP+ R T
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFT 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 91 LEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
L + EI K+ H ++K+ F + ++ IV+E + G L + + G L+ A
Sbjct: 199 LNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKV--VGNKRLKEATC 255
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILIT---EKLRAKVTDFGFARMSEEDSAV 207
+ A+ YLH + IIHRD+K N+L++ E K+TDFG +++ E S +
Sbjct: 256 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 208 SHISTQVKGTAGYLDPDYLR---TYQLTEKSDVYSFGVLLVEMMTGRYPIE---SKKPIK 261
+ GT YL P+ L T D +S GV+L ++G P ++ +K
Sbjct: 313 RTLC----GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 368
Query: 262 ERVTI--------RWAMQCLKAGDAI---LVMDPRLRRT 289
+++T WA KA D + LV+DP+ R T
Sbjct: 369 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 407
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 43/270 (15%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKR-ARKNKHDKCLLLEFKNEILTW 100
I ++ + IG G G + K + +VAVK R K D+ K EI+
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDE----NVKREIINH 69
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA----ERLDIAID 156
+ H N+V+ + IV+EY G L E + G + A ++L +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILI--TEKLRAKVTDFGFARMSEEDSAVSHISTQ- 213
HA+ + HRD+K N L+ + R K+ FG+++ S+V H +
Sbjct: 130 YCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKS 175
Query: 214 VKGTAGYLDPDYLRTYQLTEK-SDVYSFGVLLVEMMTGRYPIES-------KKPIKERVT 265
GT Y+ P+ L + K +DV+S GV L M+ G YP E +K I +
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 266 IRWAM--------QCLKAGDAILVMDPRLR 287
+++A+ +C I V DP R
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 43/270 (15%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKR-ARKNKHDKCLLLEFKNEILTW 100
I ++ + IG G G + K + +VAVK R K D+ K EI+
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDE----NVKREIINH 69
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA----ERLDIAID 156
+ H N+V+ + IV+EY G L E + G + A ++L +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILI--TEKLRAKVTDFGFARMSEEDSAVSHISTQ- 213
HA+ + HRD+K N L+ + R K+ FG+++ S+V H +
Sbjct: 130 YCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKD 175
Query: 214 VKGTAGYLDPDYLRTYQLTEK-SDVYSFGVLLVEMMTGRYPIES-------KKPIKERVT 265
GT Y+ P+ L + K +DV+S GV L M+ G YP E +K I +
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 266 IRWAM--------QCLKAGDAILVMDPRLR 287
+++A+ +C I V DP R
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNL 108
A G+ T Y D ++ VAVK + + H + L+ E K +L++ H+N+
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK--VLSYLG-NHMNI 112
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGL----------------ELAERLD 152
V L G G +++ EY G L L + + + +L + L
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ VA + +L + + IHRD+ A NIL+T K+ DFG AR + DS +
Sbjct: 173 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDS-----NY 224
Query: 213 QVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT------GRYPIESK--KPI 260
VKG A ++ P+ + T +SDV+S+G+ L E+ + P++SK K I
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 261 KE 262
KE
Sbjct: 285 KE 286
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG----------NGLELAERLDI 153
HLN+V L G + G +++VE+ G L +L + + L L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
+ VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 150 SFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR-KGD 205
Query: 214 VKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 48/245 (19%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTW 100
E ++A P +G+GG GTV+ G +L D VA+K +N+ +L W
Sbjct: 27 EAFEAEYRLGPL--LGKGGFGTVFAGHRLTDRLQVAIKVIPRNR------------VLGW 72
Query: 101 SKIE--------------------HLNLVKLFGFLEHGDERIIVVEY-VGNGTLREHLDG 139
S + H +++L + E + ++V+E + L +++
Sbjct: 73 SPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE 132
Query: 140 RGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFA 198
+G G E R VA A+ + H+ ++HRD+K NILI + AK+ DFG
Sbjct: 133 KGPLG-EGPSRCFFGQVVA-AIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187
Query: 199 RMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL-TEKSDVYSFGVLLVEMMTGRYPIESK 257
+ ++ T GT Y P+++ +Q + V+S G+LL +M+ G P E
Sbjct: 188 ALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242
Query: 258 KPIKE 262
+ I E
Sbjct: 243 QEILE 247
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ DF AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLL-LEFKNEILTW 100
+Y + +F + +GEG G V K G IVA+K+ DK L L EI
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKIL 63
Query: 101 SKIEHLNLVKLFGF-----LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
+H N++ +F E+ +E I+ E + D ++ I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-------DLHRVISTQMLSDDHIQY 116
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSA-VSHISTQV 214
+ L + +IHRD+K SN+LI KV DFG AR+ +E +A S + Q
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 215 KGTAGYLDPDYLRTYQLTEKS-------DVYSFGVLLVEMMTGR 251
G ++ + R ++ S DV+S G +L E+ R
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNL 108
A G+ T Y D ++ VAVK + + H + L+ E K +L++ H+N+
Sbjct: 49 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK--VLSYLG-NHMNI 105
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGL----------------ELAERLD 152
V L G G +++ EY G L L + + + +L + L
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ VA + +L + + IHRD+ A NIL+T K+ DFG AR + DS +
Sbjct: 166 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS-----NY 217
Query: 213 QVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT------GRYPIESK--KPI 260
VKG A ++ P+ + T +SDV+S+G+ L E+ + P++SK K I
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 261 KE 262
KE
Sbjct: 278 KE 279
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNL 108
A G+ T Y D ++ VAVK + + H + L+ E K +L++ H+N+
Sbjct: 51 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK--VLSYLG-NHMNI 107
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGL----------------ELAERLD 152
V L G G +++ EY G L L + + + +L + L
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ VA + +L + + IHRD+ A NIL+T K+ DFG AR + DS +
Sbjct: 168 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS-----NY 219
Query: 213 QVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT------GRYPIESK--KPI 260
VKG A ++ P+ + T +SDV+S+G+ L E+ + P++SK K I
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
Query: 261 KE 262
KE
Sbjct: 280 KE 281
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNL 108
A G+ T Y D ++ VAVK + + H + L+ E K +L++ H+N+
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK--VLSYLG-NHMNI 89
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGL----------------ELAERLD 152
V L G G +++ EY G L L + + + +L + L
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ VA + +L + + IHRD+ A NIL+T K+ DFG AR + DS +
Sbjct: 150 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS-----NY 201
Query: 213 QVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT------GRYPIESK--KPI 260
VKG A ++ P+ + T +SDV+S+G+ L E+ + P++SK K I
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 261 KE 262
KE
Sbjct: 262 KE 263
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 150 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 210 ISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 207 -KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ FG AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 56 IGEGGSGTVYKGKLK--DGSI--VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKL 111
+GEG G+V +G LK DG+ VAVK + + + + EF +E H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 112 FGF-LEHGDERI----IVVEYVGNGTLREHLD----GRGGNGLELAERLDIAIDVAHALT 162
G +E + I +++ ++ G L +L G + L L +D+A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
YL S+ +HRD+ A N ++ + + V DFG ++ K ++
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ-GRIAKMPVKWIA 217
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ L T KSDV++FGV + E+ T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLL-LEFKNEILTW 100
+Y + +F + +GEG G V K G IVA+K+ DK L L EI
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--FDKPLFALRTLREIKIL 63
Query: 101 SKIEHLNLVKLFGF-----LEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
+H N++ +F E+ +E I+ E + D ++ I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-------DLHRVISTQMLSDDHIQY 116
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS---- 211
+ L + +IHRD+K SN+LI KV DFG AR+ +E +A +
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 212 ---TQVKGTAGYLDPDYLRT-YQLTEKSDVYSFGVLLVEMMTGR 251
T+ T Y P+ + T + + DV+S G +L E+ R
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 150 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 210 ISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 207 -KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 152 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 210 ISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 209 -KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 53 ANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKH---DKCLLLEFKNEILTWSKIEHLNL 108
A G+ T Y D ++ VAVK + + H + L+ E K +L++ H+N+
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK--VLSYLG-NHMNI 112
Query: 109 VKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGL----------------ELAERLD 152
V L G G +++ EY G L L + + + +L + L
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+ VA + +L + + IHRD+ A NIL+T K+ DFG AR + DS +
Sbjct: 173 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS-----NY 224
Query: 213 QVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT------GRYPIESK--KPI 260
VKG A ++ P+ + T +SDV+S+G+ L E+ + P++SK K I
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 261 KE 262
KE
Sbjct: 285 KE 286
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++VE+ G L +L + + L L
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 187 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 210 ISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 244 -----KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+G+G G V++G + G VAVK ++ +K E E+ + H N++ GF+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRE--TELYNTVMLRHENIL---GFI 68
Query: 116 ------EHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
H ++ ++ Y G+L ++L L+ L I + +A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-GTAGYLD 222
T P I HRD+K+ NIL+ + + + D G A M + + + + GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 223 PDYL-RTYQLT-----EKSDVYSFGVLLVEM---MTGRYPIESKKP 259
P+ L T Q+ ++ D+++FG++L E+ M +E KP
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ D G AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+G+G G V++G + G VAVK ++ +K E E+ + H N++ GF+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRE--TELYNTVMLRHENIL---GFI 68
Query: 116 ------EHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
H ++ ++ Y G+L ++L L+ L I + +A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-GTAGYLD 222
T P I HRD+K+ NIL+ + + + D G A M + + + + GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 223 PDYL-RTYQLT-----EKSDVYSFGVLLVEM---MTGRYPIESKKP 259
P+ L T Q+ ++ D+++FG++L E+ M +E KP
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 EEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFK-NEIL 98
EE++ T ++G G G V++ K K G AVK+ R L F+ E++
Sbjct: 55 EEVHWMTHQ----PRVGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELV 102
Query: 99 TWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
+ + +V L+G + G I +E + G+L + + G L L
Sbjct: 103 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQAL 160
Query: 159 HALTYLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQ--VK 215
L YLHT I+H DVKA N+L+ ++ RA + DFG A + D + T +
Sbjct: 161 EGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
GT ++ P+ + K D++S +++ M+ G +P
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 EEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFK-NEIL 98
EE++ T ++G G G V++ K K G AVK+ R L F+ E++
Sbjct: 71 EEVHWMTHQ----PRVGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELV 118
Query: 99 TWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
+ + +V L+G + G I +E + G+L + + G L L
Sbjct: 119 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQAL 176
Query: 159 HALTYLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHIST--QVK 215
L YLHT I+H DVKA N+L+ ++ RA + DFG A + D + T +
Sbjct: 177 EGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
GT ++ P+ + K D++S +++ M+ G +P
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ D G AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
+G+G G V++G + G VAVK ++ +K E E+ + H N++ GF+
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRE--TELYNTVMLRHENIL---GFI 97
Query: 116 ------EHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
H ++ ++ Y G+L ++L L+ L I + +A L +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK-GTAGYLD 222
T P I HRD+K+ NIL+ + + + D G A M + + + + GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 223 PDYL-RTYQLT-----EKSDVYSFGVLLVEM---MTGRYPIESKKP 259
P+ L T Q+ ++ D+++FG++L E+ M +E KP
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 36 INFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFK 94
+N + E+ + +N SP +G G G+V K G VAVK+ +
Sbjct: 13 LNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 95 NEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD-- 152
E+ ++H N++ L +E + L HL G N + ++L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 153 ----IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVS 208
+ + L Y+H+ IIHRD+K SN+ + E K+ D G AR ++++
Sbjct: 126 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDE---- 178
Query: 209 HISTQVKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T T Y P+ + + + D++S G ++ E++TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ +K +K K EI +++ ++V
Sbjct: 55 FAKCYEITDMDTKEVFAGKVVPKSML-LKPHQKEK--------MSTEIAIHKSLDNPHVV 105
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + + YLH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR- 162
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + + + K+ DFG A E D + GT Y+ P+ L
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKK 217
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + D++S G +L ++ G+ P E+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ +K +K K EI +++ ++V
Sbjct: 55 FAKCYEITDMDTKEVFAGKVVPKSML-LKPHQKEK--------MSTEIAIHKSLDNPHVV 105
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + + YLH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR- 162
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + + + K+ DFG A E D + GT Y+ P+ L
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKK 217
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + D++S G +L ++ G+ P E+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ +K +K K EI +++ ++V
Sbjct: 55 FAKCYEITDMDTKEVFAGKVVPKSML-LKPHQKEK--------MSTEIAIHKSLDNPHVV 105
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + + YLH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR- 162
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + + + K+ DFG A E D + GT Y+ P+ L
Sbjct: 163 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPNYIAPEVLCKK 217
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + D++S G +L ++ G+ P E+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFET 244
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 EEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFK-NEIL 98
EE++ T ++G G G V++ K K G AVK+ R L F+ E++
Sbjct: 69 EEVHWMTHQ----PRLGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELV 116
Query: 99 TWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
+ + +V L+G + G I +E + G+L + + G L L
Sbjct: 117 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQAL 174
Query: 159 HALTYLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQ--VK 215
L YLHT I+H DVKA N+L+ ++ RA + DFG A + D + T +
Sbjct: 175 EGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
GT ++ P+ + K D++S +++ M+ G +P
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++ E+ G L +L + + L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 141 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 210 ISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 198 -----KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 41 EEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILT 99
EE++ AT ++G G G V++ + K G AVK+ R L + E++
Sbjct: 90 EEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVR-------LEVFRAEELMA 138
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
+ + +V L+G + G I +E + G+L + + +G L L
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALE 196
Query: 160 ALTYLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKG 216
L YLH+ I+H DVKA N+L+ ++ A + DFG A + D + T + G
Sbjct: 197 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
T ++ P+ + K DV+S +++ M+ G +P
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 50 FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
F+ +I + + V+ GK+ S++ +K +K K EI +++ ++V
Sbjct: 39 FAKCYEITDMDTKEVFAGKVVPKSML-LKPHQKEK--------MSTEIAIHKSLDNPHVV 89
Query: 110 KLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSD 169
GF E D +V+E +L E L R E R + + + YLH
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR- 146
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
+IHRD+K N+ + + + K+ DFG A E D + GT Y+ P+ L
Sbjct: 147 --VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKK 201
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIES 256
+ + D++S G +L ++ G+ P E+
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDK-C--------LLL 91
+++ ++ + IGEG G V + VA+K+ +H C +LL
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 92 EFK-------NEILTWSKIEHLNLVKLFGFLEHGD-ERIIVVEYVGNGTLREHLDGRGGN 143
F+ N+I+ IE + V + L D +++ +++ N + L
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL------ 134
Query: 144 GLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++
Sbjct: 135 -----------YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 204 DSAVSHISTQVKGTAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
D + T+ T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHA 160
SK+ H +LV +G GDE I+V E+V G+L +L + N + + +L++A +A A
Sbjct: 67 SKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWA 125
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV-KGTAG 219
+ +L + +IH +V A NIL+ + K + F ++S+ +++ + + +
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 220 YLDPDYLRTYQ-LTEKSDVYSFGVLLVEMMTG 250
++ P+ + + L +D +SFG L E+ +G
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 41 EEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLLEFKNEILT 99
EE++ AT ++G G G V++ + K G AVK+ R L + E++
Sbjct: 71 EEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVR-------LEVFRAEELMA 119
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
+ + +V L+G + G I +E + G+L + + +G L L
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALE 177
Query: 160 ALTYLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQ--VKG 216
L YLH+ I+H DVKA N+L+ ++ A + DFG A + D + T + G
Sbjct: 178 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYP 253
T ++ P+ + K DV+S +++ M+ G +P
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 26/228 (11%)
Query: 35 TINFSFEEIYKATEN-----FSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCL 89
T N F+ +Y+ E FS + + +G Y K I+ K+ H K
Sbjct: 15 TENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAK-----IINTKKLSARDHQK-- 67
Query: 90 LLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAE 149
+ E ++H N+V+L + ++ + V G L E + R E
Sbjct: 68 ---LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYS 119
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSA 206
D + + L + ++HRD+K N+L+ KL+ K+ DFG A E +
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 207 VSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
GT GYL P+ LR + D+++ GV+L ++ G P
Sbjct: 180 AWF---GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++ E+ G L +L + + L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 141 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 210 ISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 198 -----KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 56 IGEGGSGTV-----YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVK 110
+GEG G V YK + K ++ + R K D + +E EI + H +++K
Sbjct: 17 LGEGSFGKVKLATHYKTQQK-VALKFISRQLLKKSDMHMRVE--REISYLKLLRHPHIIK 73
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ + + ++V+EY G G L +++ + + R + A+ Y H +
Sbjct: 74 LYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCHRHK-- 128
Query: 171 PIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL--RT 228
I+HRD+K N+L+ + L K+ DFG + + + + + G+ Y P+ + +
Sbjct: 129 -IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVINGKL 183
Query: 229 YQLTEKSDVYSFGVLLVEMMTGRYPIESK 257
Y E DV+S G++L M+ GR P + +
Sbjct: 184 YAGPE-VDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 82 KNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREH----- 136
K+K+D +FKNE+ + I++ + G + + DE I+ EY+ N ++ +
Sbjct: 84 KSKYD-----DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF 138
Query: 137 -LDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDF 195
LD + + I V ++ +Y+H ++ I HRDVK SNIL+ + R K++DF
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 196 GFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTE--KSDVYSFGVLLVEMMTGRYP 253
G E + V +GT ++ P++ K D++S G+ L M P
Sbjct: 197 G-----ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
Query: 254 IESK 257
K
Sbjct: 252 FSLK 255
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 141 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHA 160
SK+ H +LV +G GDE I+V E+V G+L +L + N + + +L++A +A A
Sbjct: 67 SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAA 125
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV-KGTAG 219
+ +L + +IH +V A NIL+ + K + F ++S+ +++ + + +
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 220 YLDPDYLRTYQ-LTEKSDVYSFGVLLVEMMTG 250
++ P+ + + L +D +SFG L E+ +G
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDK-C--------LLL 91
+++ ++ + IGEG G V + VA+K+ +H C +LL
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 92 EFK-------NEILTWSKIEHLNLVKLFGFLEHGD-ERIIVVEYVGNGTLREHLDGRGGN 143
F+ N+I+ IE + V + L D +++ +++ N + L
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL------ 132
Query: 144 GLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEE 203
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++
Sbjct: 133 -----------YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 204 DSAVSHISTQVKGTAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
D + T+ T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 41/218 (18%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTW---SKIEHLNLVK- 110
+IG+G G V+ GK + G VAVK + F E +W ++I L++
Sbjct: 44 QIGKGRYGEVWMGKWR-GEKVAVK------------VFFTTEEASWFRETEIYQTVLMRH 90
Query: 111 --LFGFLE-------HGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHAL 161
+ GF+ + ++ +Y NG+L ++L L+ L +A L
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGL 147
Query: 162 TYLHT-----YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK- 215
+LHT P I HRD+K+ NIL+ + + D G A D+ I +
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV 207
Query: 216 GTAGYLDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
GT Y+ P+ L +Q +D+YSFG++L E+
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 105 HLNLVKLFGFL-EHGDERIIVVEYVGNGTLREHLDGRGG--------------NGLELAE 149
HLN+V L G + G +++ E+ G L +L + + L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 150 RLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH 209
+ + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 141 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 210 ISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 198 -----KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H +++ L E +V + + G L ++L + L E I + A+++L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFL 216
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H + I+HRD+K NIL+ + ++ +++DFGF+ E + + GT GYL P+
Sbjct: 217 HANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC----GTPGYLAPE 269
Query: 225 YLRTYQ------LTEKSDVYSFGVLLVEMMTGRYPIESKKPI 260
L+ ++ D+++ GV+L ++ G P ++ I
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 45 KATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
+ T F KIG G G+V+K K DG I A+KR++K E+ + +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 104 -EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--DGRGGNGLELAERLDIAIDVAHA 160
+H ++V+ F D +I EY G+L + + + R + + AE D+ + V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSA-------------V 207
L Y+H+ S ++H D+K SNI I+ R + + E+D A V
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 179
Query: 208 SHIST-QV-KGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLV 245
+ IS+ QV +G + +L + L+ Y K+D+++ + +V
Sbjct: 180 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 45 KATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
+ T F KIG G G+V+K K DG I A+KR++K E+ + +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 104 -EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--DGRGGNGLELAERLDIAIDVAHA 160
+H ++V+ F D +I EY G+L + + + R + + AE D+ + V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI---------- 210
L Y+H+ S ++H D+K SNI I+ R + + E+D A + +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 179
Query: 211 ----STQV-KGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLV 245
S QV +G + +L + L+ Y K+D+++ + +V
Sbjct: 180 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+LI K+ DFG AR+++ + + T+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 45 KATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
+ T F KIG G G+V+K K DG I A+KR++K E+ + +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 104 -EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--DGRGGNGLELAERLDIAIDVAHA 160
+H ++V+ F D +I EY G+L + + + R + + AE D+ + V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI---------- 210
L Y+H+ S ++H D+K SNI I+ R + + E+D A + +
Sbjct: 128 LRYIHSMS---LVHMDIKPSNIFIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181
Query: 211 ----STQV-KGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLV 245
S QV +G + +L + L+ Y K+D+++ + +V
Sbjct: 182 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + T+
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRAR---KNKHDKCLLLEFKNEILTWSKI 103
++F +++G G G V+K + K DG + AVKR+ + D+ L E+ + K+
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKL---AEVGSHEKV 113
Query: 104 -EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALT 162
+H V+L E G + E G +L++H + G + L A+ D AL
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGAS-LPEAQVWGYLRDTLLALA 171
Query: 163 YLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLD 222
+LH+ ++H DVK +NI + + R K+ DFG + E +A + +G Y+
Sbjct: 172 HLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGA--GEVQEGDPRYMA 224
Query: 223 PDYLRTYQLTEKSDVYSFGVLLVEM 247
P+ L+ T +DV+S G+ ++E+
Sbjct: 225 PELLQGSYGT-AADVFSLGLTILEV 248
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 59 GGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHG 118
G G V+K +L + + ++K + + EI + ++H NL++ + G
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQS----WQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 119 D----ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT-------- 166
E ++ + G+L ++L G N + E +A ++ L+YLH
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
P I HRD K+ N+L+ L A + DFG A E QV GT Y+ P+ L
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV-GTRRYMAPEVL 197
Query: 227 R---TYQLTE--KSDVYSFGVLLVEMMT 249
+Q + D+Y+ G++L E+++
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 45 KATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
+ T F KIG G G+V+K K DG I A+KR++K E+ + +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 104 -EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHL--DGRGGNGLELAERLDIAIDVAHA 160
+H ++V+ F D +I EY G+L + + + R + + AE D+ + V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSA-------------V 207
L Y+H+ S ++H D+K SNI I+ R + + E+D A V
Sbjct: 124 LRYIHSMS---LVHMDIKPSNIFIS---RTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 177
Query: 208 SHIST-QV-KGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLV 245
+ IS+ QV +G + +L + L+ Y K+D+++ + +V
Sbjct: 178 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 151 LDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHI 210
L I I +A A+ +LH+ ++HRD+K SNI T KV DFG ++D +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 211 STQVK---------GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T + GT Y+ P+ + + K D++S G++L E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 49 NFSPANKIGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLE-FKNEILTWSKIEHL 106
+F P +G GG G V++ K K D A+KR R + L E E+ +K+EH
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHP 64
Query: 107 NLVKLF-GFLEHGDER 121
+V+ F +LE E+
Sbjct: 65 GIVRYFNAWLETPPEK 80
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 93/233 (39%), Gaps = 39/233 (16%)
Query: 48 ENFSPANKIGEGGSGTVYK----GKLKDG-SIVAVKRARKNKHDKCLLLEFKNEILTWSK 102
EN +G G G V G K G SI + K K D +E+ ++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 103 I-EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGG------------------- 142
+ H N+V L G ++ EY G L +L +
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 143 --NGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARM 200
N L + L A VA + +L S +HRD+ A N+L+T K+ DFG AR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 201 SEEDSAVSHISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
DS + V+G A ++ P+ L T KSDV+S+G+LL E+ +
Sbjct: 222 IMSDS-----NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 56 IGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIE-HLNLVKLFG 113
+ EGG VY+ + + G A+KR N+ +K + E+ K+ H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI--IQEVCFMKKLSGHPNIVQFCS 93
Query: 114 FLEHGDER-------IIVVEYVGNGTLREHLDGRGGNG-LELAERLDIAIDVAHALTYLH 165
G E +++ + G L E L G L L I A+ ++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARM---------SEEDSAVSHISTQVKG 216
PPIIHRD+K N+L++ + K+ DFG A S + A+
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 217 TAGYLDPDYLRTYQ---LTEKSDVYSFGVLLVEMMTGRYPIE 255
T Y P+ + Y + EK D+++ G +L + ++P E
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 157 VAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG 216
+ L Y+H+ + ++HRD+K SN+L+ K+ DFG AR+++ D + +
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 217 TAGYLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ L + T+ D++S G +L EM++ R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 38/238 (15%)
Query: 55 KIGEGGSGTVYKG-KLKDGSIVAVKR---ARKNKHDKCLLLEFKNEILTWSKIE-HLNLV 109
K+G+G G V+K + G +VAVK+ A +N D EI+ +++ H N+V
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR---EIMILTELSGHENIV 72
Query: 110 KLFGFLEHGDER--IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
L L ++R +V +Y+ H R N LE + + + + YLH+
Sbjct: 73 NLLNVLRADNDRDVYLVFDYMETDL---HAVIRA-NILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSH------------------ 209
++HRD+K SNIL+ + KV DFG +R V++
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 210 ISTQVKGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGR--YPIESKKPIKERV 264
I T T Y P+ L + + T+ D++S G +L E++ G+ +P S ER+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 42/244 (17%)
Query: 45 KATENFSPANKI-GEGGSGTV-YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSK 102
++ +N + KI G G SGTV ++G + G VAVKR + D L+E K +LT S
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD-IALMEIK--LLTESD 66
Query: 103 IEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRG--GNGLELAER---LDIAIDV 157
+H N+++ + E D + + + N L++ ++ + L+L + + + +
Sbjct: 67 -DHPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILIT-------------EKLRAKVTDFGFARMSEED 204
A + +LH+ IIHRD+K NIL++ E LR ++DFG + + D
Sbjct: 125 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLD 179
Query: 205 SAVSHISTQVK---GTAGYLDPDYLRTY-------QLTEKSDVYSFGVLLVEMMT-GRYP 253
S S T + GT+G+ P+ L +LT D++S G + +++ G++P
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 254 IESK 257
K
Sbjct: 240 FGDK 243
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 94 KNEILTWSKIEHLNLVKLFGFL--EHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL 151
K EI ++ H N+++L L E + +V+EY G ++E LD + +
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAH 112
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIS 211
+ L YLH+ I+H+D+K N+L+T K++ G A +A
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 212 TQVKGTAGYLDPDY---LRTYQLTEKSDVYSFGVLLVEMMTGRYPIE 255
T +G+ + P+ L T+ K D++S GV L + TG YP E
Sbjct: 170 TS-QGSPAFQPPEIANGLDTFS-GFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 131/304 (43%), Gaps = 56/304 (18%)
Query: 40 FEEIYKATENFSPANKIGEGGSGTVY--KGKLKDG--SIVAVKRARKNKHDKCLLLEFKN 95
+E + + + F +KIGEG +VY +L+ G +A+K H + E
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAEL-- 70
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAI 155
+ LT + + N++ + D +I + Y+ + + + L N L E + +
Sbjct: 71 QCLTVAGGQD-NVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYML 124
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRA-KVTDFGFA---------------- 198
++ AL +H + I+HRDVK SN L +L+ + DFG A
Sbjct: 125 NLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 199 -----RMSEEDSAVSHISTQV----KGTAGYLDPDYL-RTYQLTEKSDVYSFGVLLVEMM 248
R S+ ++ Q GT G+ P+ L + T D++S GV+ + ++
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 249 TGRYPI----ESKKPIKERVTIRWAMQCLKA----GDAILVMDPRLRRTPASNM--AVEK 298
+GRYP + + + +TIR + + ++A G +IL + PA ++ E+
Sbjct: 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCS----KEVPAQDLRKLCER 297
Query: 299 ILGL 302
+ G+
Sbjct: 298 LRGM 301
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 39/244 (15%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
+F +G+G G V K + D A+K+ R + +L +E+ + + H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL---SEVXLLASLNHQY 63
Query: 108 LVKLFG-FLEHGD------------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
+V+ + +LE + I EY N TL + + N + E +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ-QRDEYWRLF 122
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ- 213
+ AL+Y+H+ IIHR++K NI I E K+ DFG A+ + + +Q
Sbjct: 123 RQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 214 ----------VKGTAGYLDPDYLR-TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKE 262
GTA Y+ + L T EK D YS G++ E + YP + E
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTG---XE 233
Query: 263 RVTI 266
RV I
Sbjct: 234 RVNI 237
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 23/218 (10%)
Query: 40 FEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
FEE+ K FS + + +G Y K I+ K+ H K + E
Sbjct: 9 FEELGKGA--FSVVRRCMKIPTGQEYAAK-----IINTKKLSARDHQK-----LEREARI 56
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
++H N+V+L + +V + V G L E + R E D + +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQ 111
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSAVSHISTQVKG 216
L ++ I+HRD+K N+L+ K + K+ DFG A + D G
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF---GFAG 168
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
T GYL P+ LR + D+++ GV+L ++ G P
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVAVKRARKNKH--DKCLLLEFKNEILTWSKIEHLNLVKLF 112
++G G G V++ K V V + + DK + KNEI +++ H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHPKLINLH 114
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
E E ++++E++ G L + + E AE ++ L ++H +S I
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE-AEVINYMRQACEGLKHMHEHS---I 170
Query: 173 IHRDVKASNILITEKLRA--KVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQ 230
+H D+K NI+ K + K+ DFG A D V ++T TA + P+ +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK-VTT---ATAEFAAPEIVDREP 226
Query: 231 LTEKSDVYSFGVLLVEMMTGRYPI 254
+ +D+++ GVL +++G P
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD--IAIDVAHALTYLH 165
+V+LF + +V+EY+ G L + + ++ E+ +V AL +H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-----SNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
+ +IHRDVK N+L+ + K+ DFG M +++ + H T V GT Y+ P+
Sbjct: 192 SMG---LIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAV-GTPDYISPEV 246
Query: 226 LRTY----QLTEKSDVYSFGVLLVEMMTGRYPI 254
L++ + D +S GV L EM+ G P
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 45 KATENFSPANKIGEGGSGTVYK------GKLKDGSIVAVKRARKNKHDKCLLLEFKNEIL 98
+ TE + ++G+G V + G+ I+ K+ H K + E
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-----LEREAR 62
Query: 99 TWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
++H N+V+L + ++ + V G L E + R E D + +
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQ 117
Query: 159 HALTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSAVSHISTQVK 215
L + ++HR++K N+L+ KL+ K+ DFG A E +
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF---GFA 174
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
GT GYL P+ LR + D+++ GV+L ++ G P
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 22/217 (10%)
Query: 47 TENFSPANKIGEGGSGTVYKG-KLKDG-----SIVAVKRARKNKHDKCLLLEFKNEILTW 100
T+ + IG+G V + KL G I+ K+ H K + E
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK-----LEREARIC 57
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHA 160
++H N+V+L + +V + V G L E + R E D + +
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQI 112
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSAVSHISTQVKGT 217
L + ++HRD+K N+L+ K + K+ DFG A + D GT
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF---GFAGT 169
Query: 218 AGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
GYL P+ LR + D+++ GV+L ++ G P
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVK----RARKNKHDKCLLLEFKNEI 97
I+ +FS IG GG G VY + D G + A+K + K K + L L NE
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL---NER 240
Query: 98 LTWSKIE--HLNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
+ S + + + H +++ +++ + G L HL G A+ A
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 298
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L ++H +++RD+K +NIL+ E +++D G A + H S
Sbjct: 299 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-- 351
Query: 215 KGTAGYLDPDYLRTYQLTEKS-DVYSFGVLLVEMMTGRYPIESKK 258
GT GY+ P+ L+ + S D +S G +L +++ G P K
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVK----RARKNKHDKCLLLEFKNEI 97
I+ +FS IG GG G VY + D G + A+K + K K + L L NE
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL---NER 240
Query: 98 LTWSKIE--HLNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
+ S + + + H +++ +++ + G L HL G A+ A
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 298
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L ++H +++RD+K +NIL+ E +++D G A + H S
Sbjct: 299 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-- 351
Query: 215 KGTAGYLDPDYLRTYQLTEKS-DVYSFGVLLVEMMTGRYPIESKK 258
GT GY+ P+ L+ + S D +S G +L +++ G P K
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 33 ATTINFSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE 92
++ ++ E +Y + G G V+K +L + + ++K +
Sbjct: 9 SSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQS----WQ 64
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGD----ERIIVVEYVGNGTLREHLDGRGGNGLELA 148
+ E+ + ++H N+++ G + G + ++ + G+L + L N +
Sbjct: 65 NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWN 121
Query: 149 ERLDIAIDVAHALTYLHT-------YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS 201
E IA +A L YLH P I HRD+K+ N+L+ L A + DFG A
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 202 EEDSAVSHISTQVKGTAGYLDPDYLR---TYQLTE--KSDVYSFGVLLVEMMT 249
E + QV GT Y+ P+ L +Q + D+Y+ G++L E+ +
Sbjct: 182 EAGKSAGDTHGQV-GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVK----RARKNKHDKCLLLEFKNEI 97
I+ +FS IG GG G VY + D G + A+K + K K + L L NE
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL---NER 240
Query: 98 LTWSKIE--HLNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
+ S + + + H +++ +++ + G L HL G A+ A
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 298
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L ++H +++RD+K +NIL+ E +++D G A + H S
Sbjct: 299 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-- 351
Query: 215 KGTAGYLDPDYLRTYQLTEKS-DVYSFGVLLVEMMTGRYPIESKK 258
GT GY+ P+ L+ + S D +S G +L +++ G P K
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 22/225 (9%)
Query: 43 IYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVK----RARKNKHDKCLLLEFKNEI 97
I+ +FS IG GG G VY + D G + A+K + K K + L L NE
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL---NER 239
Query: 98 LTWSKIE--HLNLVKLFGFLEHGDERI-IVVEYVGNGTLREHLDGRGGNGLELAERLDIA 154
+ S + + + H +++ +++ + G L HL G A+ A
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYA 297
Query: 155 IDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQV 214
++ L ++H +++RD+K +NIL+ E +++D G A + H S
Sbjct: 298 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-- 350
Query: 215 KGTAGYLDPDYLRTYQLTEKS-DVYSFGVLLVEMMTGRYPIESKK 258
GT GY+ P+ L+ + S D +S G +L +++ G P K
Sbjct: 351 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 23/218 (10%)
Query: 40 FEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
FEE+ K FS + + +G Y K I+ K+ H K + E
Sbjct: 9 FEELGKGA--FSVVRRCMKIPTGQEYAAK-----IINTKKLSARDHQK-----LEREARI 56
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAH 159
++H N+V+L + +V + V G L E + R E D + +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQ 111
Query: 160 ALTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSAVSHISTQVKG 216
L ++ I+HRD+K N+L+ K + K+ DFG A + D G
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF---GFAG 168
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
T GYL P+ LR + D+++ GV+L ++ G P
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI-EHLNLVKLFGF 114
IG G G V++ KL + VA+K+ ++K FKN L +I +H N+V L F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAF 100
Query: 115 L-EHGDER-----IIVVEYVGNGTLR--EHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+GD++ +V+EYV R H L +L + + +L Y+H+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM-YQLLRSLAYIHS 159
Query: 167 YSDPPIIHRDVKASNILITEKLRA-KVTDFGFAR-MSEEDSAVSHISTQVKGTAGYLDPD 224
I HRD+K N+L+ K+ DFG A+ + + VS I ++ Y P+
Sbjct: 160 IG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPE 211
Query: 225 YLR-TYQLTEKSDVYSFGVLLVEMMTGR--YPIES 256
+ T D++S G ++ E+M G+ +P ES
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLKD------GSIVAVKRARKNKHDKCLLLEFKNEILTW 100
T+++ ++G+G V + K I+ K+ H K + E
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK-----LEREARIC 84
Query: 101 SKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHA 160
++H N+V+L + +V + V G L E + R E D + +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIHQI 139
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFA-RMSEEDSAVSHISTQVKG 216
L ++ I+HRD+K N+L+ K + K+ DFG A + E A + G
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA----G 195
Query: 217 TAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
T GYL P+ LR + D+++ GV+L ++ G P
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 48 ENFSPANKIGEGGSGTVYKGKLKDGS-IVAVKRARK----NKHDKCLLLEFKNEILT--- 99
E+F IG G G V KLK+ + A+K K + + E ++ ++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 100 -WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNG--TLREHLDGRGGNGLE---LAERLDI 153
W H + F + + +++ YVG TL + R + LAE + I
Sbjct: 134 KWITTLH------YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV-I 186
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
AID H L Y +HRD+K NIL+ ++ DFG ED V S+
Sbjct: 187 AIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ--SSV 235
Query: 214 VKGTAGYLDPDYLRTYQ-----LTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
GT Y+ P+ L+ + + D +S GV + EM+ G P ++ ++
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 95 NEILTWSKIEHLNLVKLFGFLE--HGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
EI K++H N+VKL L+ + D +V E V G + E + + E R
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLS--EDQARFY 142
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
D+ + YLH IIHRD+K SN+L+ E K+ DFG +S E + +
Sbjct: 143 FQ-DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFG---VSNEFKGSDALLS 195
Query: 213 QVKGTAGYLDPDYL---RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
GT ++ P+ L R + DV++ GV L + G+ P
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 36/313 (11%)
Query: 32 QATTINFSFEEIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLL 91
+A+ + +E E IG+G G VY G+ + + ++ D+ L
Sbjct: 17 KASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQ--LK 74
Query: 92 EFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL 151
FK E++ + + H N+V G I+ TL + L++ +
Sbjct: 75 AFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTR 133
Query: 152 DIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMS---EEDSAVS 208
IA ++ + YLH I+H+D+K+ N+ + + +TDFG +S +
Sbjct: 134 QIAQEIVKGMGYLHAKG---ILHKDLKSKNVF-YDNGKVVITDFGLFSISGVLQAGRRED 189
Query: 209 HISTQVKGTAGYLDPDYLRTYQ---------LTEKSDVYSFGVLLVEMMTGRYPIESKKP 259
+ Q G +L P+ +R ++ SDV++ G + E+ +P ++ +P
Sbjct: 190 KLRIQ-NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT-QP 247
Query: 260 IKERVTIRWAMQCLKAGDAILVMDPRLRRTPASNMAVEKILGLADVCLAPTRQSRPTMKK 319
+ I W M G M P L + + +L C A ++ RPT K
Sbjct: 248 AE---AIIWQM-----GTG---MKPNLSQIGMGKEISDILL----FCWAFEQEERPTFTK 292
Query: 320 CAEILWKIRKDFR 332
++L K+ K R
Sbjct: 293 LMDMLEKLPKRNR 305
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAG 219
L Y+H+ +IHRD+K SN+L+ E K+ DFG AR + + + T+ T
Sbjct: 172 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 220 YLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
Y P+ L ++ T+ D++S G + EM+ R
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V++GK + G VAVK ++ ++ E EI + H N++ GF+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFRE--AEIYQTVMLRHENIL---GFI 63
Query: 116 EHGD-------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
+ + +V +Y +G+L ++L+ + + + +A+ A L +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK---GTAGY 220
T P I HRD+K+ NIL+ + + D G A DSA I GT Y
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 178
Query: 221 LDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
+ P+ L + ++ +++D+Y+ G++ E+
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V++GK + G VAVK ++ ++ E EI + H N++ GF+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFRE--AEIYQTVMLRHENIL---GFI 66
Query: 116 EHGD-------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
+ + +V +Y +G+L ++L+ + + + +A+ A L +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK---GTAGY 220
T P I HRD+K+ NIL+ + + D G A DSA I GT Y
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 181
Query: 221 LDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
+ P+ L + ++ +++D+Y+ G++ E+
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 51 SPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
SP + +G G G+V + G VA+K+ + + E+L ++H N++
Sbjct: 46 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 104
Query: 110 KLFG-FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
L F R Y+ ++ L G + + + L Y+H+
Sbjct: 105 GLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG---TAGYLDPDY 225
++HRD+K N+ + E K+ DFG AR H ++ G T Y P+
Sbjct: 165 ---VVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVVTRWYRAPEV 212
Query: 226 LRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+ ++ + D++S G ++ EM+TG+
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V++GK + G VAVK ++ ++ E EI + H N++ GF+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFRE--AEIYQTVMLRHENIL---GFI 64
Query: 116 EHGD-------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
+ + +V +Y +G+L ++L+ + + + +A+ A L +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK---GTAGY 220
T P I HRD+K+ NIL+ + + D G A DSA I GT Y
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 179
Query: 221 LDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
+ P+ L + ++ +++D+Y+ G++ E+
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V++GK + G VAVK ++ ++ E EI + H N++ GF+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFRE--AEIYQTVMLRHENIL---GFI 69
Query: 116 EHGD-------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
+ + +V +Y +G+L ++L+ + + + +A+ A L +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK---GTAGY 220
T P I HRD+K+ NIL+ + + D G A DSA I GT Y
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 184
Query: 221 LDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
+ P+ L + ++ +++D+Y+ G++ E+
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
F+ K + G+G Y K +K + + +R + E + E+ +I H N
Sbjct: 24 QFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE-------EIEREVNILREIRHPN 76
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++ L E+ + ++++E V G L + L + L E + + YLH+
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK 134
Query: 168 SDPPIIHRDVKASNILITEK----LRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
I H D+K NI++ +K R K+ DFG A E + +I GT ++ P
Sbjct: 135 R---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAP 187
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
+ + L ++D++S GV+ +++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
F+ K + G+G Y K +K + + +R + E + E+ +I H N
Sbjct: 38 QFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSRE-------EIEREVNILREIRHPN 90
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++ L E+ + ++++E V G L + L + L E + + YLH+
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK 148
Query: 168 SDPPIIHRDVKASNILITEK----LRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
I H D+K NI++ +K R K+ DFG A E + +I GT ++ P
Sbjct: 149 R---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAP 201
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
+ + L ++D++S GV+ +++G P
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 49 NFSPANKIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLN 107
F+ K + G+G Y K +K + + +R + E + E+ +I H N
Sbjct: 17 QFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE-------EIEREVNILREIRHPN 69
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTY 167
++ L E+ + ++++E V G L + L + L E + + YLH+
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK 127
Query: 168 SDPPIIHRDVKASNILITEK----LRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDP 223
I H D+K NI++ +K R K+ DFG A E + +I GT ++ P
Sbjct: 128 R---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAP 180
Query: 224 DYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
+ + L ++D++S GV+ +++G P
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 51 SPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLV 109
SP + +G G G+V + G VA+K+ + + E+L ++H N++
Sbjct: 28 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 86
Query: 110 KLFG-FLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYS 168
L F R Y+ ++ L G + + + L Y+H+
Sbjct: 87 GLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG 146
Query: 169 DPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKG---TAGYLDPDY 225
++HRD+K N+ + E K+ DFG AR H ++ G T Y P+
Sbjct: 147 ---VVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVVTRWYRAPEV 194
Query: 226 LRTY-QLTEKSDVYSFGVLLVEMMTGR 251
+ ++ + D++S G ++ EM+TG+
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 38/240 (15%)
Query: 45 KATENFSPANKI-GEGGSGTV-YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSK 102
++ +N + KI G G SGTV ++G + G VAVKR + D L+E K +LT S
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD-IALMEIK--LLTESD 84
Query: 103 IEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRG--GNGLELAER---LDIAIDV 157
+H N+++ + E D + + + N L++ ++ + L+L + + + +
Sbjct: 85 -DHPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILIT-------------EKLRAKVTDFGFARMSEED 204
A + +LH+ IIHRD+K NIL++ E LR ++DFG + + D
Sbjct: 143 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLD 197
Query: 205 SAVSHISTQVK---GTAGYLDPDYLR---TYQLTEKSDVYSFGVLLVEMMT-GRYPIESK 257
S + GT+G+ P+ L +LT D++S G + +++ G++P K
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V++GK + G VAVK ++ ++ E EI + H N++ GF+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFRE--AEIYQTVMLRHENIL---GFI 102
Query: 116 EHGD-------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
+ + +V +Y +G+L ++L+ + + + +A+ A L +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK---GTAGY 220
T P I HRD+K+ NIL+ + + D G A DSA I GT Y
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 217
Query: 221 LDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
+ P+ L + ++ +++D+Y+ G++ E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFAR-MSEEDSAVSHISTQVKGTAG 219
L Y+H+ +IHRD+K SN+L+ E K+ DFG AR + + + T+ T
Sbjct: 171 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 220 YLDPD-YLRTYQLTEKSDVYSFGVLLVEMMTGR 251
Y P+ L ++ T+ D++S G + EM+ R
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 38/240 (15%)
Query: 45 KATENFSPANKI-GEGGSGTV-YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSK 102
++ +N + KI G G SGTV ++G + G VAVKR + D L+E K +LT S
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD-IALMEIK--LLTESD 84
Query: 103 IEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRG--GNGLELAER---LDIAIDV 157
+H N+++ + E D + + + N L++ ++ + L+L + + + +
Sbjct: 85 -DHPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILIT-------------EKLRAKVTDFGFARMSEED 204
A + +LH+ IIHRD+K NIL++ E LR ++DFG + + D
Sbjct: 143 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLD 197
Query: 205 SAVSHISTQVK---GTAGYLDPDYLR---TYQLTEKSDVYSFGVLLVEMMT-GRYPIESK 257
S + GT+G+ P+ L +LT D++S G + +++ G++P K
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 56 IGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFL 115
IG+G G V++GK + G VAVK ++ ++ E EI + H N++ GF+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFRE--AEIYQTVMLRHENIL---GFI 89
Query: 116 EHGD-------ERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLH--- 165
+ + +V +Y +G+L ++L+ + + + +A+ A L +LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 166 --TYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK---GTAGY 220
T P I HRD+K+ NIL+ + + D G A DSA I GT Y
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 204
Query: 221 LDPDYL------RTYQLTEKSDVYSFGVLLVEM 247
+ P+ L + ++ +++D+Y+ G++ E+
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 56 IGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
+G G G V + G+ VA+K+ + + E+ + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 115 ------LEHGDERIIVVEYVGN--GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
L+ + +V+ ++G G L +H + G + ++ + + L Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQF-----LVYQMLKGLRYIHA 146
Query: 167 YSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYL 226
IIHRD+K N+ + E K+ DFG AR ++ + + T Y P+ +
Sbjct: 147 AG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV------TRWYRAPEVI 197
Query: 227 RTY-QLTEKSDVYSFGVLLVEMMTGR 251
+ + T+ D++S G ++ EM+TG+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 56 IGEGGSGTVYKGKLKDGSI-VAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGF 114
+G GG+G V+ D VA+K+ D + EI +++H N+VK+F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 115 LEHGDERIIVVEYVGNGT-------LREHLDGRGGNGLELAERLD-----IAIDVAHALT 162
L G + + VG+ T ++E+++ N LE L+ + L
Sbjct: 77 L--GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLK 134
Query: 163 YLHTYSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKG--TAG 219
Y+H+ + ++HRD+K +N+ I TE L K+ DFG AR+ D SH +G T
Sbjct: 135 YIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM--DPHYSHKGHLSEGLVTKW 189
Query: 220 YLDPDYLRT-YQLTEKSDVYSFGVLLVEMMTGR 251
Y P L + T+ D+++ G + EM+TG+
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 28/239 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNK-HDKC 88
G + + FE++Y+ E+ +GEG V L AVK K H +
Sbjct: 1 GSTDSFSGRFEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS 55
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGG-NGLEL 147
+ F+ + + H N+++L F E D +V E + G++ H+ R N LE
Sbjct: 56 RV--FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEED 204
+ + DVA AL +LH I HRD+K NIL + K+ DFG + +
Sbjct: 114 SV---VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 205 SAVSHISTQ----VKGTAGYLDPDYLRTYQ-----LTEKSDVYSFGVLLVEMMTGRYPI 254
S IST G+A Y+ P+ + + ++ D++S GV+L +++G P
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 94 KNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDI 153
+ EI T S + H LV L E +E +++ E++ G L E + N + E ++
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEY 260
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKL--RAKVTDFGFARMSEEDSAVSHIS 211
V L ++H + +H D+K NI+ T K K+ DFG + +V ++
Sbjct: 261 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VT 316
Query: 212 TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
T GTA + P+ + +D++S GVL +++G P
Sbjct: 317 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 94 KNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDI 153
+ EI T S + H LV L E +E +++ E++ G L E + N + E ++
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEY 154
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKL--RAKVTDFGFARMSEEDSAVSHIS 211
V L ++H + +H D+K NI+ T K K+ DFG + +V ++
Sbjct: 155 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VT 210
Query: 212 TQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
T GTA + P+ + +D++S GVL +++G P
Sbjct: 211 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N++ L + G +V E + G L + + + E + + + Y
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEY 131
Query: 164 LHTYSDPPIIHRDVKASNILITEKL----RAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LH ++HRD+K SNIL ++ ++ DFGFA+ ++ + TA
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY---TAN 185
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
++ P+ L D++S GVLL M+TG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKVVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S GV++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGN-GTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHT 166
+++L + E D ++++E L + + RG ELA V A+ + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHN 175
Query: 167 YSDPPIIHRDVKASNILI-TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDY 225
++HRD+K NILI + K+ DFG + ++ + T GT Y P++
Sbjct: 176 CG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEW 227
Query: 226 LRTYQLTEKSD-VYSFGVLLVEMMTGRYPIESKKPI-------KERVT------IRWAM 270
+R ++ +S V+S G+LL +M+ G P E + I ++RV+ IRW +
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 286
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKVVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S GV++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 42/229 (18%)
Query: 48 ENFSPANKIGEGGSGTVY---------KGKLKDGSIVA----VKRARKNKHDKCLLLEFK 94
ENF +G G G V+ GKL ++ V++A+ +H + +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT-----E 108
Query: 95 NEILTWSKIEHLN----LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAER 150
++L EH+ LV L + + ++++Y+ G L HL R E
Sbjct: 109 RQVL-----EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR-----ERFTE 158
Query: 151 LDIAI---DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAV 207
++ I ++ AL +LH II+RD+K NIL+ +TDFG ++ D
Sbjct: 159 HEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-- 213
Query: 208 SHISTQVKGTAGYLDPDYLR--TYQLTEKSDVYSFGVLLVEMMTGRYPI 254
+ + GT Y+ PD +R + D +S GVL+ E++TG P
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 76 AVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLRE 135
AVK K+K D +E +L + +H N++ L + G +V E + G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEI---LLRYG--QHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 136 HLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILIT------EKLR 189
+ + E + + + YLH+ ++HRD+K SNIL E LR
Sbjct: 111 KILRQ--KFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLR 165
Query: 190 AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ DFGFA+ ++ + TA ++ P+ L+ E D++S G+LL M+
Sbjct: 166 --ICDFGFAKQLRAENGLLMTPCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
Query: 250 GRYPI 254
G P
Sbjct: 221 GYTPF 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 25/219 (11%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+++ + +G G G+V Y +L+ VAVK+ + E+
Sbjct: 15 VWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRL 72
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------I 153
++H N++ L +E L L G N + + L +
Sbjct: 73 LKHLKHENVIGLLDVFTPATS----IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL 128
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
+ L Y+H+ IIHRD+K SN+ + E ++ DFG AR ++E+ T
Sbjct: 129 VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE------MTG 179
Query: 214 VKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + + D++S G ++ E++ G+
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 76 AVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLRE 135
AVK K+K D +E +L + +H N++ L + G +V E + G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEI---LLRYG--QHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 136 HLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLR----AK 191
+ + E + + + YLH+ ++HRD+K SNIL ++ +
Sbjct: 111 KILRQ--KFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLR 165
Query: 192 VTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGR 251
+ DFGFA+ ++ + TA ++ P+ L+ E D++S G+LL M+ G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 252 YPI 254
P
Sbjct: 223 TPF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 42/244 (17%)
Query: 45 KATENFSPANKI-GEGGSGTV-YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSK 102
++ +N + KI G G SGTV ++G + G VAVKR + D L+E K +LT S
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD-IALMEIK--LLTESD 66
Query: 103 IEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRG--GNGLELAER---LDIAIDV 157
+H N+++ + E D + + + N L++ ++ + L+L + + + +
Sbjct: 67 -DHPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 158 AHALTYLHTYSDPPIIHRDVKASNILIT-------------EKLRAKVTDFGFARMSEED 204
A + +LH+ IIHRD+K NIL++ E LR ++DFG + + D
Sbjct: 125 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLD 179
Query: 205 SAVSHISTQVK---GTAGYLDPDYLRTY-------QLTEKSDVYSFGVLLVEMMT-GRYP 253
S + GT+G+ P+ L +LT D++S G + +++ G++P
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 254 IESK 257
K
Sbjct: 240 FGDK 243
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVKL 111
+G GG G V+ ++K G + A K+ K + K + + +IL +K+ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL--AKVHSRFIVSL 250
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG--RGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E + +V+ + G +R H+ G + + + L +LH +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
II+RD+K N+L+ + +++D G A E A + GT G++ P+ L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESK------KPIKERV 264
+ D ++ GV L EM+ R P ++ K +K+RV
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 23 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 78 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 134
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 187
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVKL 111
+G GG G V+ ++K G + A K+ K + K + + +IL +K+ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL--AKVHSRFIVSL 250
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG--RGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E + +V+ + G +R H+ G + + + L +LH +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
II+RD+K N+L+ + +++D G A E A + GT G++ P+ L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESK------KPIKERV 264
+ D ++ GV L EM+ R P ++ K +K+RV
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVKL 111
+G GG G V+ ++K G + A K+ K + K + + +IL +K+ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL--AKVHSRFIVSL 250
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG--RGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E + +V+ + G +R H+ G + + + L +LH +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
II+RD+K N+L+ + +++D G A E A + GT G++ P+ L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESK------KPIKERV 264
+ D ++ GV L EM+ R P ++ K +K+RV
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 56 IGEGGSGTVYKGKLK-DGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVKL 111
+G GG G V+ ++K G + A K+ K + K + + +IL +K+ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL--AKVHSRFIVSL 250
Query: 112 FGFLEHGDERIIVVEYVGNGTLREHLDG--RGGNGLELAERLDIAIDVAHALTYLHTYSD 169
E + +V+ + G +R H+ G + + + L +LH +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 170 PPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTY 229
II+RD+K N+L+ + +++D G A E A + GT G++ P+ L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 230 QLTEKSDVYSFGVLLVEMMTGRYPIESK------KPIKERV 264
+ D ++ GV L EM+ R P ++ K +K+RV
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L + + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 247 PDYVR-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L + + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 245 PDYVR-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L + + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 205 SAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
+ ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 254 PDYVR-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 145 LELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEED 204
L L + + VA + +L + IHRD+ A NIL++EK K+ DFG AR +D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 205 SAVSHISTQVKGTA----GYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
KG A ++ P+ + T +SDV+SFGVLL E+ +
Sbjct: 252 PDYVR-----KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKVVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPEV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+++ + +G G G+V Y +L+ VAVK+ + E+
Sbjct: 23 VWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRL 80
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD------I 153
++H N++ L +E L L G N + ++ L +
Sbjct: 81 LKHLKHENVIGLLDVFTPATS----IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFL 136
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQ 213
+ L Y+H+ IIHRD+K SN+ + E ++ DFG AR ++E+ T
Sbjct: 137 VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTG 187
Query: 214 VKGTAGYLDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + + + D++S G ++ E++ G+
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKVVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 161 LTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGY 220
L Y+H+ IIHRD+K SN+ + E ++ DFG AR ++E+ T T Y
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGYVATRWY 194
Query: 221 LDPDYLRTY-QLTEKSDVYSFGVLLVEMMTGR 251
P+ + + + D++S G ++ E++ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 31 GQATTINFSFEEIYKATENFSPANKIGEGGSGTVYKG-KLKDGSIVAVKRARKNK-HDKC 88
G + + FE++Y+ E+ +GEG V L AVK K H +
Sbjct: 1 GSTDSFSGRFEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS 55
Query: 89 LLLEFKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGG-NGLEL 147
+ F+ + + H N+++L F E D +V E + G++ H+ R N LE
Sbjct: 56 RV--FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 148 AERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLR---AKVTDFGFARMSEED 204
+ + DVA AL +LH I HRD+K NIL + K+ DF + +
Sbjct: 114 SV---VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167
Query: 205 SAVSHISTQ----VKGTAGYLDPDYLRTYQ-----LTEKSDVYSFGVLLVEMMTGRYPI 254
S IST G+A Y+ P+ + + ++ D++S GV+L +++G P
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 135 EHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTD 194
E DG + + + + + VA + +L S IHRD+ A NIL++E K+ D
Sbjct: 186 EDSDGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICD 242
Query: 195 FGFAR-MSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMT 249
FG AR + + V T++ ++ P+ + + KSDV+S+GVLL E+ +
Sbjct: 243 FGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 24 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 78
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 79 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 135
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S +
Sbjct: 136 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMVPFV 188
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTG 250
T Y P+ + E D++S G ++ EM+ G
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 122 IIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPIIHRDVKASN 181
+IV+E + G L + RG E +I + A+ YLH+ + I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 147
Query: 182 ILITEKLR---AKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTEKSDVY 238
+L T K K+TDFGFA K T G + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFA----------------KETTG---------EKYDKSCDMW 182
Query: 239 SFGVLLVEMMTGRYPIES 256
S GV++ ++ G P S
Sbjct: 183 SLGVIMYILLCGYPPFYS 200
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 54 NKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVK 110
N IG G G V K ++ G+ ++RA K K K + + FK EI ++H N+++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGT--RIRRAAK-KIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ E + +V+E G L E + + A R I DV A+ Y H +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHKLN-- 126
Query: 171 PIIHRDVKASNILI---TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ HRD+K N L + K+ DFG A + + T+V GT Y+ P L
Sbjct: 127 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKV-GTPYYVSPQVLE 181
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
E D +S GV++ ++ G P + + + IR
Sbjct: 182 GLYGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+AID H L Y +HRD+K N+L+ ++ DFG +D V S+
Sbjct: 202 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ--SS 250
Query: 213 QVKGTAGYLDPDYLRTYQ-----LTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
GT Y+ P+ L+ + + D +S GV + EM+ G P ++ ++
Sbjct: 251 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 54 NKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHDKCLLLE---FKNEILTWSKIEHLNLVK 110
N IG G G V K ++ G+ ++RA K K K + + FK EI ++H N+++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGT--RIRRAAK-KIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 111 LFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDP 170
L+ E + +V+E G L E + + A R I DV A+ Y H +
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHKLN-- 143
Query: 171 PIIHRDVKASNILI---TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+ HRD+K N L + K+ DFG A + + T+V GT Y+ P L
Sbjct: 144 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKV-GTPYYVSPQVLE 198
Query: 228 TYQLTEKSDVYSFGVLLVEMMTGRYPIESKKPIKERVTIR 267
E D +S GV++ ++ G P + + + IR
Sbjct: 199 GLYGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 237
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 14/218 (6%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHD---------KCLLLE 92
E++ ++ I G G V G +G VA+KR D L
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
EI + H N++ L H +E + Y+ +R L + +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
I + H L LH + ++HRD+ NIL+ + + DF AR D+ +H T
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 213 QVKGTAGYLDPDYLRTYQ-LTEKSDVYSFGVLLVEMMT 249
Y P+ + ++ T+ D++S G ++ EM
Sbjct: 196 H----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
+AID H L Y +HRD+K N+L+ ++ DFG +D V S+
Sbjct: 186 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ--SS 234
Query: 213 QVKGTAGYLDPDYLRTYQ-----LTEKSDVYSFGVLLVEMMTGRYPIESKKPIK 261
GT Y+ P+ L+ + + D +S GV + EM+ G P ++ ++
Sbjct: 235 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 14/218 (6%)
Query: 42 EIYKATENFSPANKIGEGGSGTVYKGKLKDGSIVAVKRARKNKHD---------KCLLLE 92
E++ ++ I G G V G +G VA+KR D L
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 93 FKNEILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD 152
EI + H N++ L H +E + Y+ +R L + +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 153 IAIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHIST 212
I + H L LH + ++HRD+ NIL+ + + DF AR D+ +H T
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 213 QVKGTAGYLDPDYLRTYQ-LTEKSDVYSFGVLLVEMMT 249
Y P+ + ++ T+ D++S G ++ EM
Sbjct: 196 H----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 12/155 (7%)
Query: 104 EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTY 163
+H N++ L + G +V E G L + + + E + + + Y
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KFFSEREASAVLFTITKTVEY 131
Query: 164 LHTYSDPPIIHRDVKASNILITEKL----RAKVTDFGFARMSEEDSAVSHISTQVKGTAG 219
LH ++HRD+K SNIL ++ ++ DFGFA+ ++ + TA
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY---TAN 185
Query: 220 YLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
++ P+ L D++S GVLL +TG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKXVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 105 HLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
H N+++L E +V + + G L ++L + L E I + + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICAL 127
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPD 224
H + I+HRD+K NIL+ + + K+TDFGF+ + + +V GT YL P+
Sbjct: 128 HKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAPE 180
Query: 225 YLRTYQ------LTEKSDVYSFGVLLVEMMTGRYPIESKK 258
+ ++ D++S GV++ ++ G P +K
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 55 KIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G G V+K + K G VA+K+ + + EI ++H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 114 FLEHGD---ERIIVVEYVGNGTLREHLDGRGGNGL---ELAERLDIAIDVAHALTYLHTY 167
R Y+ L G N L L+E + + + L Y+H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE--EDSAVSHISTQVKGTAGYLDPDY 225
I+HRD+KA+N+LIT K+ DFG AR ++S + +V T Y P+
Sbjct: 145 K---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 200
Query: 226 L---RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
L R Y D++ G ++ EM T R PI
Sbjct: 201 LLGERDY--GPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 24/226 (10%)
Query: 48 ENFSPANKIGEGGSGTV----YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
EN+ P +G G S V +K K+ ++ + + E + L I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 104 -----EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
H N+++L E +V + + G L ++L + L E I +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALL 134
Query: 159 HALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTA 218
+ LH + I+HRD+K NIL+ + + K+TDFGF+ + + +V GT
Sbjct: 135 EVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTP 187
Query: 219 GYLDPDYLRTYQ------LTEKSDVYSFGVLLVEMMTGRYPIESKK 258
YL P+ + ++ D++S GV++ ++ G P +K
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 60 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 115 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 171
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 172 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 224
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 54 NKIGEGGSGTVYKG-KLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLF 112
K+GEG G VYK VA+KR R ++ + E+ +++H N+++L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 113 GFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPPI 172
+ H ++ EY N L++++D + + + + + + + H+
Sbjct: 100 SVIHHNHRLHLIFEYAEND-LKKYMDKNPDVSMRVIK--SFLYQLINGVNFCHSRR---C 153
Query: 173 IHRDVKASNILI-----TEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLR 227
+HRD+K N+L+ +E K+ DFG AR + + ++ T Y P+ L
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEII-TLWYRPPEILL 210
Query: 228 -TYQLTEKSDVYSFGVLLVEMM--TGRYPIESK 257
+ + D++S + EM+ T +P +S+
Sbjct: 211 GSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 21/228 (9%)
Query: 40 FEEIYKATENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNKHDKCLLL---EFKN 95
FE++Y+ E IG+G V + ++ G AVK K L + K
Sbjct: 22 FEDVYELCE------VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 96 EILTWSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERL--DI 153
E ++H ++V+L +V E++ L + R G +E +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 154 AIDVAHALTYLHTYSDPPIIHRDVKASNILITEKLRA---KVTDFGFARMSEEDSAVSHI 210
+ AL Y H D IIHRDVK N+L+ K + K+ DFG A E V+
Sbjct: 136 MRQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 211 STQVKGTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGRYPIESKK 258
GT ++ P+ ++ + DV+ GV+L +++G P K
Sbjct: 193 RV---GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 60 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 115 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 171
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 172 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 224
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 15 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 70 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 126
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 127 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYV 179
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 16 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 71 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 127
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYV 180
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 16 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 71 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 127
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 180
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 23 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 78 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 134
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 187
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 21 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 75
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 76 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 132
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 133 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 185
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 47 TENFSPANKIGEGGSGTVYKGKLKD-GSIVAVKRARKNK-HDKCLLLEFKN-----EILT 99
++ +S + +G G G V+ K+ V VK +K K + C + + K EI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGT-LREHLDGRGGNGLELAERLDIAIDVA 158
S++EH N++K+ E+ +V+E G+G L +D LA I +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY--IFRQLV 140
Query: 159 HALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTA 218
A+ YL IIHRD+K NI+I E K+ DFG A E + GT
Sbjct: 141 SAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER----GKLFYTFCGTI 193
Query: 219 GYLDPDYL--RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
Y P+ L Y+ E +++S GV L ++ P
Sbjct: 194 EYCAPEVLMGNPYRGPE-LEMWSLGVTLYTLVFEENPF 230
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 27 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 81
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 82 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 138
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 139 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYV 191
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + E D++S G ++ EM+ +
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 15 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 70 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY 126
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 127 QMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART----AGTSFMMTPYV 179
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 23 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 78 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 134
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMTPYV 187
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKXVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 16 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 71 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 127
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYV 180
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + E D++S G ++ EM+ +
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART----AGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKXVNHKNIISLLNVFT---PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S + T
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMM 248
T Y P+ + E D++S G ++ EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 48 ENFSPANKIGEGGSGTV----YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKI 103
EN+ P +G G S V +K K+ ++ + + E + L I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 104 -----EHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVA 158
H N+++L E +V + + G L ++L + L E I +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALL 134
Query: 159 HALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTA 218
+ LH + I+HRD+K NIL+ + + K+TDFGF+ + + + GT
Sbjct: 135 EVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC----GTP 187
Query: 219 GYLDPDYLRTYQ------LTEKSDVYSFGVLLVEMMTGRYPIESKK 258
YL P+ + ++ D++S GV++ ++ G P +K
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 55 KIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G G V+K + K G VA+K+ + + EI ++H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 114 FLEHGD---ERIIVVEYVGNGTLREHLDGRGGNGL---ELAERLDIAIDVAHALTYLHTY 167
R Y+ L G N L L+E + + + L Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE--EDSAVSHISTQVKGTAGYLDPDY 225
I+HRD+KA+N+LIT K+ DFG AR ++S + +V T Y P+
Sbjct: 145 K---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 200
Query: 226 L---RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
L R Y D++ G ++ EM T R PI
Sbjct: 201 LLGERDY--GPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 55 KIGEGGSGTVYKGKLKDGSIVA-VKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
K+ E SG ++KG+ + IV V + R K +F E H N++ + G
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR--DFNEECPRLRIFSHPNVLPVLG 74
Query: 114 FLEH--GDERIIVVEYVGNGTLREHLDGRGGNGLELAERLDIAIDVAHALTYLHTYSDPP 171
+ ++ ++ G+L L ++ ++ + A+D+A + +LHT +P
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPL 133
Query: 172 IIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQL 231
I + + +++I E + A R+S D S S ++ P+ L+
Sbjct: 134 IPRHALNSRSVMIDEDMTA--------RISMADVKFSFQSPGRMYAPAWVAPEALQKKPE 185
Query: 232 T---EKSDVYSFGVLLVEMMTGRYPI 254
+D++SF VLL E++T P
Sbjct: 186 DTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 55 KIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G G V+K + K G VA+K+ + + EI ++H N+V L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 114 FLEHGD---ERIIVVEYVGNGTLREHLDGRGGNGL---ELAERLDIAIDVAHALTYLHTY 167
R Y+ L G N L L+E + + + L Y+H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE--EDSAVSHISTQVKGTAGYLDPDY 225
I+HRD+KA+N+LIT K+ DFG AR ++S + +V T Y P+
Sbjct: 144 K---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 199
Query: 226 L---RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
L R Y D++ G ++ EM T R PI
Sbjct: 200 LLGERDY--GPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 55 KIGEGGSGTVYKGK-LKDGSIVAVKRARKNKHDKCLLLEFKNEILTWSKIEHLNLVKLFG 113
KIG+G G V+K + K G VA+K+ + + EI ++H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 114 FLEHGD---ERIIVVEYVGNGTLREHLDGRGGNGL---ELAERLDIAIDVAHALTYLHTY 167
R Y+ L G N L L+E + + + L Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 168 SDPPIIHRDVKASNILITEKLRAKVTDFGFARMSE--EDSAVSHISTQVKGTAGYLDPDY 225
I+HRD+KA+N+LIT K+ DFG AR ++S + +V T Y P+
Sbjct: 145 K---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 200
Query: 226 L---RTYQLTEKSDVYSFGVLLVEMMTGRYPI 254
L R Y D++ G ++ EM T R PI
Sbjct: 201 LLGERDY--GPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELAERLD--IAIDVAHALTYLH 165
+V+LF + +V+EY+ G L + + ++ E+ +V AL +H
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLALDAIH 185
Query: 166 TYSDPPIIHRDVKASNILITEKLRAKVTDFGFA-RMSEEDSAVSHISTQVKGTAGYLDPD 224
+ IHRDVK N+L+ + K+ DFG +M++E + T V GT Y+ P+
Sbjct: 186 SMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDTAV-GTPDYISPE 239
Query: 225 YLRTY----QLTEKSDVYSFGVLLVEMMTGRYPI 254
L++ + D +S GV L EM+ G P
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNG---TLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
+V+LF + +V+EY+ G L + D + +A+D H++ +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF- 194
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFA-RMSEEDSAVSHISTQVKGTAGYLDP 223
IHRDVK N+L+ + K+ DFG +M++E + T V GT Y+ P
Sbjct: 195 --------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDTAV-GTPDYISP 243
Query: 224 DYLRTY----QLTEKSDVYSFGVLLVEMMTGRYPI 254
+ L++ + D +S GV L EM+ G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 174 HRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVKGTAGYLDPDYLRTYQLTE 233
HRDVK NIL++ A + DFG A + D ++ + V GT Y P+ T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTV-GTLYYXAPERFSESHATY 214
Query: 234 KSDVYSFGVLLVEMMTGRYPIESKK 258
++D+Y+ +L E +TG P + +
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 108 LVKLFGFLEHGDERIIVVEYVGNG---TLREHLDGRGGNGLELAERLDIAIDVAHALTYL 164
+V+LF + +V+EY+ G L + D + +A+D H++ +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF- 194
Query: 165 HTYSDPPIIHRDVKASNILITEKLRAKVTDFGFA-RMSEEDSAVSHISTQVKGTAGYLDP 223
IHRDVK N+L+ + K+ DFG +M++E + T V GT Y+ P
Sbjct: 195 --------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDTAV-GTPDYISP 243
Query: 224 DYLRTY----QLTEKSDVYSFGVLLVEMMTGRYPI 254
+ L++ + D +S GV L EM+ G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 22/216 (10%)
Query: 43 IYKATENFSPANKIGEGGSGTV---YKGKLKDGSIVAVKRARKNKHDKCLLLEFKNEILT 99
+ K +N P IG G G V Y L+ VA+K+ + ++ E++
Sbjct: 22 VLKRYQNLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 100 WSKIEHLNLVKLFGFLEHGDERIIVVEYVGNGTLREHLDGRGGNGLELA---ERLDIAI- 155
+ H N++ G L + + E+ + E +D +++ ER+ +
Sbjct: 77 MKCVNHKNII---GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 156 DVAHALTYLHTYSDPPIIHRDVKASNILITEKLRAKVTDFGFARMSEEDSAVSHISTQVK 215
+ + +LH+ IIHRD+K SNI++ K+ DFG AR + S +
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMEPEV 186
Query: 216 GTAGYLDPDYLRTYQLTEKSDVYSFGVLLVEMMTGR 251
T Y P+ + E D++S G ++ EM+ +
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,453,129
Number of Sequences: 62578
Number of extensions: 422998
Number of successful extensions: 3577
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 1102
Number of HSP's gapped (non-prelim): 1093
length of query: 380
length of database: 14,973,337
effective HSP length: 101
effective length of query: 279
effective length of database: 8,652,959
effective search space: 2414175561
effective search space used: 2414175561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)