Query 041910
Match_columns 239
No_of_seqs 161 out of 983
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 11:58:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041910.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041910hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02245 HAD_IIID1 HAD-superf 100.0 1.6E-41 3.6E-46 286.1 15.2 167 22-215 19-190 (195)
2 KOG1605 TFIIF-interacting CTD 100.0 1.8E-40 4E-45 289.7 9.5 170 21-215 86-258 (262)
3 TIGR02251 HIF-SF_euk Dullard-l 100.0 7.6E-37 1.7E-41 251.3 12.0 160 24-208 1-162 (162)
4 PF03031 NIF: NLI interacting 100.0 1.9E-36 4.1E-41 246.7 10.6 159 25-210 1-159 (159)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 3.1E-28 6.6E-33 199.2 11.0 138 21-181 3-154 (156)
6 KOG2832 TFIIF-interacting CTD 99.9 7.7E-25 1.7E-29 196.0 12.1 155 21-215 186-342 (393)
7 smart00577 CPDc catalytic doma 99.9 2E-23 4.4E-28 168.8 12.0 143 23-187 1-147 (148)
8 COG5190 FCP1 TFIIF-interacting 99.9 4.1E-23 8.9E-28 189.0 7.9 171 19-215 207-380 (390)
9 KOG0323 TFIIF-interacting CTD 99.6 2.5E-15 5.4E-20 144.8 7.5 131 23-174 145-291 (635)
10 TIGR01681 HAD-SF-IIIC HAD-supe 98.1 1.5E-06 3.2E-11 68.5 1.8 66 25-100 1-68 (128)
11 COG4996 Predicted phosphatase 98.0 1.9E-05 4E-10 62.6 6.6 124 26-166 2-129 (164)
12 TIGR01685 MDP-1 magnesium-depe 98.0 2.6E-05 5.7E-10 64.9 7.3 137 24-174 2-151 (174)
13 TIGR01684 viral_ppase viral ph 97.9 1.2E-05 2.5E-10 72.1 4.6 74 21-116 123-198 (301)
14 PHA03398 viral phosphatase sup 97.9 2.6E-05 5.7E-10 69.8 6.2 74 22-117 126-201 (303)
15 COG5190 FCP1 TFIIF-interacting 97.8 2.4E-05 5.3E-10 72.4 4.1 124 22-166 24-158 (390)
16 cd01427 HAD_like Haloacid deha 97.4 0.00022 4.7E-09 54.1 4.9 61 26-100 1-62 (139)
17 TIGR01686 FkbH FkbH-like domai 97.3 0.00032 7E-09 63.5 4.5 65 22-98 1-67 (320)
18 TIGR00213 GmhB_yaeD D,D-heptos 97.2 0.0013 2.7E-08 54.3 6.8 51 25-89 2-53 (176)
19 PRK08942 D,D-heptose 1,7-bisph 97.1 0.0016 3.4E-08 53.8 7.2 53 24-89 3-56 (181)
20 PF12689 Acid_PPase: Acid Phos 97.0 0.0011 2.3E-08 55.1 5.1 132 23-168 2-139 (169)
21 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.0011 2.3E-08 51.7 4.9 63 25-101 1-72 (132)
22 TIGR01656 Histidinol-ppas hist 96.9 0.0023 5.1E-08 51.2 5.7 53 25-89 1-54 (147)
23 PF05152 DUF705: Protein of un 96.7 0.0054 1.2E-07 54.7 7.0 74 21-115 119-193 (297)
24 TIGR01672 AphA HAD superfamily 96.7 0.0029 6.3E-08 55.2 5.1 90 23-114 62-168 (237)
25 TIGR01663 PNK-3'Pase polynucle 96.5 0.0078 1.7E-07 58.3 7.1 116 21-163 165-294 (526)
26 TIGR01664 DNA-3'-Pase DNA 3'-p 96.4 0.012 2.6E-07 48.4 7.1 57 23-89 12-69 (166)
27 TIGR01261 hisB_Nterm histidino 96.4 0.0074 1.6E-07 49.4 5.7 52 25-87 2-54 (161)
28 TIGR01689 EcbF-BcbF capsule bi 96.4 0.014 3E-07 46.1 6.8 52 25-93 2-55 (126)
29 PRK06769 hypothetical protein; 96.1 0.018 3.9E-07 47.5 6.3 49 25-89 5-55 (173)
30 PF08645 PNK3P: Polynucleotide 96.0 0.015 3.1E-07 47.6 5.2 52 25-86 1-53 (159)
31 PRK13582 thrH phosphoserine ph 95.9 0.0042 9.2E-08 51.8 2.1 40 61-100 66-105 (205)
32 TIGR01533 lipo_e_P4 5'-nucleot 95.5 0.016 3.5E-07 51.4 4.1 79 21-100 72-156 (266)
33 TIGR01670 YrbI-phosphatas 3-de 95.5 0.03 6.6E-07 45.2 5.3 63 25-100 2-66 (154)
34 PF13344 Hydrolase_6: Haloacid 95.3 0.061 1.3E-06 40.5 6.0 52 27-101 1-53 (101)
35 PF13419 HAD_2: Haloacid dehal 94.9 0.035 7.6E-07 43.9 4.0 89 60-166 74-163 (176)
36 TIGR01668 YqeG_hyp_ppase HAD s 94.4 0.08 1.7E-06 43.5 5.0 57 22-99 23-81 (170)
37 TIGR02253 CTE7 HAD superfamily 94.3 0.051 1.1E-06 45.7 3.8 85 62-164 93-178 (221)
38 PTZ00445 p36-lilke protein; Pr 94.1 0.087 1.9E-06 45.3 4.8 132 23-173 42-198 (219)
39 PHA02530 pseT polynucleotide k 94.0 0.14 3.1E-06 45.3 6.3 131 21-174 155-290 (300)
40 PRK00192 mannosyl-3-phosphogly 93.9 0.076 1.6E-06 46.7 4.3 56 24-101 4-60 (273)
41 PRK05446 imidazole glycerol-ph 93.9 0.14 3E-06 47.4 6.1 54 23-87 1-55 (354)
42 PLN03243 haloacid dehalogenase 93.8 0.067 1.5E-06 47.1 3.8 95 62-174 108-203 (260)
43 PRK13288 pyrophosphatase PpaX; 93.8 0.1 2.2E-06 43.8 4.7 95 61-174 80-176 (214)
44 COG0561 Cof Predicted hydrolas 93.6 0.11 2.3E-06 45.2 4.7 58 23-102 2-60 (264)
45 PRK11009 aphA acid phosphatase 93.6 0.3 6.4E-06 42.7 7.3 78 23-100 62-156 (237)
46 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.4 0.16 3.4E-06 43.9 5.3 55 23-100 7-64 (242)
47 PRK08238 hypothetical protein; 93.4 0.033 7.1E-07 53.5 1.2 38 63-100 72-110 (479)
48 PRK10444 UMP phosphatase; Prov 93.3 0.28 6E-06 42.9 6.7 53 25-100 2-55 (248)
49 smart00775 LNS2 LNS2 domain. T 93.2 0.16 3.5E-06 41.3 4.8 63 26-99 1-67 (157)
50 TIGR02461 osmo_MPG_phos mannos 93.1 0.12 2.6E-06 44.4 4.2 52 26-100 1-53 (225)
51 PLN02645 phosphoglycolate phos 93.1 0.24 5.2E-06 44.6 6.3 55 23-100 27-82 (311)
52 TIGR02463 MPGP_rel mannosyl-3- 92.9 0.14 3E-06 43.3 4.1 54 26-101 1-55 (221)
53 TIGR01454 AHBA_synth_RP 3-amin 92.9 0.18 4E-06 42.0 4.8 95 61-174 73-169 (205)
54 TIGR01509 HAD-SF-IA-v3 haloaci 92.8 0.13 2.9E-06 41.4 3.8 85 62-166 84-170 (183)
55 COG3882 FkbH Predicted enzyme 92.7 0.17 3.7E-06 48.4 4.7 124 21-172 219-346 (574)
56 TIGR01449 PGP_bact 2-phosphogl 92.7 0.15 3.3E-06 42.4 4.0 94 62-174 84-179 (213)
57 TIGR01487 SPP-like sucrose-pho 92.7 0.21 4.5E-06 42.1 4.9 56 25-102 2-58 (215)
58 PF08282 Hydrolase_3: haloacid 92.5 0.12 2.5E-06 43.5 3.1 52 27-100 1-53 (254)
59 TIGR01484 HAD-SF-IIB HAD-super 92.5 0.18 3.8E-06 42.0 4.2 53 26-99 1-54 (204)
60 PRK03669 mannosyl-3-phosphogly 92.4 0.2 4.4E-06 43.9 4.7 57 22-100 5-62 (271)
61 PLN02575 haloacid dehalogenase 92.4 0.19 4.1E-06 46.9 4.6 95 62-174 215-310 (381)
62 TIGR01428 HAD_type_II 2-haloal 92.3 0.2 4.3E-06 41.5 4.3 89 62-168 91-180 (198)
63 PLN02770 haloacid dehalogenase 92.2 0.19 4.1E-06 43.6 4.2 95 62-174 107-202 (248)
64 TIGR02254 YjjG/YfnB HAD superf 92.2 0.17 3.7E-06 42.4 3.7 85 62-164 96-181 (224)
65 PRK10513 sugar phosphate phosp 92.0 0.25 5.5E-06 42.9 4.7 55 24-100 3-58 (270)
66 TIGR01458 HAD-SF-IIA-hyp3 HAD- 91.8 0.49 1.1E-05 41.4 6.3 56 25-99 2-58 (257)
67 PRK11587 putative phosphatase; 91.7 0.36 7.7E-06 40.8 5.2 95 61-174 81-176 (218)
68 PRK12702 mannosyl-3-phosphogly 91.7 0.27 5.9E-06 44.3 4.6 56 24-101 1-57 (302)
69 PRK01158 phosphoglycolate phos 91.6 0.3 6.4E-06 41.3 4.6 55 24-100 3-58 (230)
70 TIGR00099 Cof-subfamily Cof su 91.5 0.25 5.3E-06 42.7 4.1 13 26-38 1-13 (256)
71 PRK13226 phosphoglycolate phos 91.4 0.34 7.3E-06 41.4 4.8 89 61-168 93-183 (229)
72 PRK10530 pyridoxal phosphate ( 91.3 0.43 9.3E-06 41.3 5.4 16 24-39 3-18 (272)
73 TIGR01452 PGP_euk phosphoglyco 91.2 0.67 1.5E-05 40.9 6.7 52 25-99 3-55 (279)
74 TIGR01486 HAD-SF-IIB-MPGP mann 91.1 0.29 6.3E-06 42.5 4.2 53 26-100 1-54 (256)
75 PLN02779 haloacid dehalogenase 91.0 0.31 6.7E-06 43.4 4.3 95 62-174 143-240 (286)
76 PRK09449 dUMP phosphatase; Pro 90.8 0.3 6.6E-06 41.1 4.0 86 62-164 94-179 (224)
77 PRK13222 phosphoglycolate phos 90.7 0.42 9E-06 40.1 4.7 89 62-169 92-182 (226)
78 PRK10187 trehalose-6-phosphate 90.6 0.33 7.2E-06 42.8 4.1 17 23-39 13-29 (266)
79 PRK14988 GMP/IMP nucleotidase; 90.2 0.24 5.2E-06 42.4 2.8 92 62-174 92-187 (224)
80 PRK10976 putative hydrolase; P 90.2 0.42 9.1E-06 41.5 4.3 15 25-39 3-17 (266)
81 TIGR01422 phosphonatase phosph 90.1 0.49 1.1E-05 40.8 4.6 96 62-174 98-195 (253)
82 PRK10826 2-deoxyglucose-6-phos 90.0 0.35 7.6E-06 40.9 3.6 93 62-173 91-185 (222)
83 PRK15126 thiamin pyrimidine py 90.0 0.42 9.1E-06 41.7 4.2 16 24-39 2-17 (272)
84 TIGR02009 PGMB-YQAB-SF beta-ph 90.0 0.22 4.8E-06 40.4 2.3 86 62-168 87-174 (185)
85 TIGR01456 CECR5 HAD-superfamil 89.7 0.57 1.2E-05 42.4 4.9 40 26-88 2-46 (321)
86 PTZ00174 phosphomannomutase; P 89.1 0.37 8.1E-06 41.8 3.1 17 23-39 4-20 (247)
87 TIGR01549 HAD-SF-IA-v1 haloaci 89.0 0.83 1.8E-05 36.0 4.9 80 62-164 63-145 (154)
88 PLN02770 haloacid dehalogenase 88.9 0.23 5E-06 43.1 1.7 25 16-40 14-38 (248)
89 TIGR01993 Pyr-5-nucltdase pyri 88.7 0.31 6.7E-06 39.9 2.3 86 63-166 84-171 (184)
90 TIGR01548 HAD-SF-IA-hyp1 haloa 88.6 0.74 1.6E-05 38.1 4.5 82 64-165 107-190 (197)
91 PRK09484 3-deoxy-D-manno-octul 88.5 1.4 3E-05 36.5 6.1 66 22-100 19-86 (183)
92 TIGR03351 PhnX-like phosphonat 88.3 0.74 1.6E-05 38.6 4.4 90 62-168 86-178 (220)
93 TIGR01544 HAD-SF-IE haloacid d 88.3 0.53 1.1E-05 42.1 3.6 40 61-100 119-159 (277)
94 TIGR01457 HAD-SF-IIA-hyp2 HAD- 88.3 1.6 3.5E-05 37.9 6.6 39 25-86 2-41 (249)
95 TIGR01485 SPP_plant-cyano sucr 87.9 0.3 6.5E-06 42.2 1.7 57 24-99 1-58 (249)
96 TIGR02247 HAD-1A3-hyp Epoxide 87.9 0.36 7.9E-06 40.3 2.2 94 62-173 93-189 (211)
97 COG2503 Predicted secreted aci 87.7 0.57 1.2E-05 41.1 3.4 77 22-100 77-161 (274)
98 TIGR01675 plant-AP plant acid 87.6 0.75 1.6E-05 40.0 4.0 81 21-101 74-159 (229)
99 PLN02423 phosphomannomutase 87.5 0.78 1.7E-05 39.9 4.2 52 24-100 7-58 (245)
100 COG1877 OtsB Trehalose-6-phosp 87.4 0.73 1.6E-05 41.0 3.9 60 21-97 15-76 (266)
101 PRK13223 phosphoglycolate phos 87.4 0.87 1.9E-05 40.2 4.4 94 62-174 100-195 (272)
102 PRK09552 mtnX 2-hydroxy-3-keto 87.4 0.79 1.7E-05 38.8 4.0 38 62-99 73-111 (219)
103 PLN02940 riboflavin kinase 87.0 0.59 1.3E-05 43.5 3.3 96 62-174 92-188 (382)
104 TIGR01482 SPP-subfamily Sucros 87.0 0.87 1.9E-05 38.2 4.1 13 27-39 1-13 (225)
105 TIGR00338 serB phosphoserine p 87.0 0.95 2.1E-05 37.9 4.3 39 62-100 84-123 (219)
106 COG4359 Uncharacterized conser 86.8 1.5 3.3E-05 37.1 5.2 43 61-103 71-114 (220)
107 PHA02597 30.2 hypothetical pro 86.8 0.38 8.2E-06 39.8 1.7 89 62-172 73-164 (197)
108 PRK13478 phosphonoacetaldehyde 86.7 1.7 3.6E-05 38.0 5.8 96 62-174 100-197 (267)
109 PRK09456 ?-D-glucose-1-phospha 86.6 0.54 1.2E-05 39.1 2.5 89 62-168 83-173 (199)
110 PRK06698 bifunctional 5'-methy 86.6 1.1 2.4E-05 42.5 5.0 91 62-174 329-421 (459)
111 TIGR01460 HAD-SF-IIA Haloacid 86.4 1.4 3E-05 38.0 5.1 45 27-94 1-46 (236)
112 PRK10725 fructose-1-P/6-phosph 86.1 0.54 1.2E-05 38.3 2.3 89 64-172 89-178 (188)
113 COG0637 Predicted phosphatase/ 85.8 0.58 1.3E-05 40.0 2.4 90 61-168 84-174 (221)
114 PRK10725 fructose-1-P/6-phosph 85.8 0.43 9.2E-06 38.9 1.5 18 23-40 4-21 (188)
115 PRK13225 phosphoglycolate phos 85.7 1 2.2E-05 40.0 4.0 92 62-174 141-233 (273)
116 TIGR01548 HAD-SF-IA-hyp1 haloa 85.0 0.5 1.1E-05 39.2 1.6 15 26-40 2-16 (197)
117 PRK11587 putative phosphatase; 84.9 0.45 9.8E-06 40.2 1.3 16 24-39 3-18 (218)
118 TIGR02252 DREG-2 REG-2-like, H 84.8 1.2 2.6E-05 36.8 3.8 83 63-164 105-188 (203)
119 TIGR00685 T6PP trehalose-phosp 84.7 0.6 1.3E-05 40.4 2.0 42 23-81 2-43 (244)
120 TIGR01691 enolase-ppase 2,3-di 84.6 1.2 2.7E-05 38.3 3.9 90 61-168 93-184 (220)
121 PRK11590 hypothetical protein; 84.4 0.56 1.2E-05 39.6 1.7 39 62-100 94-134 (211)
122 PF09419 PGP_phosphatase: Mito 84.3 1.5 3.3E-05 36.3 4.1 45 23-88 40-87 (168)
123 TIGR03333 salvage_mtnX 2-hydro 84.3 1.5 3.2E-05 37.0 4.2 41 61-101 68-109 (214)
124 PLN02151 trehalose-phosphatase 84.3 1.1 2.5E-05 41.4 3.7 58 23-97 97-154 (354)
125 PLN03243 haloacid dehalogenase 83.6 0.63 1.4E-05 41.0 1.7 20 20-39 20-39 (260)
126 PLN02887 hydrolase family prot 83.6 1.6 3.5E-05 43.0 4.6 58 21-100 305-363 (580)
127 TIGR03351 PhnX-like phosphonat 83.5 0.64 1.4E-05 39.0 1.6 16 25-40 2-17 (220)
128 TIGR02252 DREG-2 REG-2-like, H 83.3 0.75 1.6E-05 38.1 2.0 15 25-39 1-15 (203)
129 PHA02597 30.2 hypothetical pro 83.2 1.6 3.4E-05 36.0 3.9 16 24-39 2-17 (197)
130 COG1011 Predicted hydrolase (H 83.1 1.6 3.4E-05 36.5 3.8 94 62-173 98-191 (229)
131 PRK10563 6-phosphogluconate ph 82.9 0.67 1.4E-05 39.0 1.5 92 62-173 87-179 (221)
132 COG2179 Predicted hydrolase of 82.8 2.5 5.4E-05 35.1 4.7 110 10-168 15-125 (175)
133 TIGR01993 Pyr-5-nucltdase pyri 82.6 0.59 1.3E-05 38.2 1.0 14 26-39 2-15 (184)
134 PRK14502 bifunctional mannosyl 82.3 2.1 4.6E-05 42.9 4.9 58 21-100 413-471 (694)
135 PRK13288 pyrophosphatase PpaX; 82.3 0.69 1.5E-05 38.7 1.3 17 24-40 3-19 (214)
136 TIGR02009 PGMB-YQAB-SF beta-ph 82.1 0.63 1.4E-05 37.7 1.0 16 25-40 2-17 (185)
137 PRK13226 phosphoglycolate phos 81.7 0.69 1.5E-05 39.5 1.2 17 23-39 11-27 (229)
138 TIGR02253 CTE7 HAD superfamily 81.6 0.7 1.5E-05 38.7 1.2 16 25-40 3-18 (221)
139 COG0647 NagD Predicted sugar p 81.4 4.1 8.9E-05 36.3 6.0 57 22-101 6-63 (269)
140 PLN02580 trehalose-phosphatase 80.9 1.8 3.9E-05 40.5 3.7 58 23-97 118-175 (384)
141 PRK13225 phosphoglycolate phos 80.7 0.7 1.5E-05 41.0 0.9 17 23-39 61-77 (273)
142 PRK13223 phosphoglycolate phos 80.3 0.98 2.1E-05 39.8 1.7 18 22-39 11-28 (272)
143 PRK13478 phosphonoacetaldehyde 80.2 0.91 2E-05 39.6 1.4 16 24-39 4-19 (267)
144 PLN03017 trehalose-phosphatase 80.0 2.2 4.8E-05 39.6 3.9 58 22-96 109-166 (366)
145 TIGR01488 HAD-SF-IB Haloacid D 79.8 2.6 5.6E-05 33.7 3.9 39 62-100 72-111 (177)
146 TIGR01549 HAD-SF-IA-v1 haloaci 79.7 0.78 1.7E-05 36.1 0.8 14 26-39 1-14 (154)
147 TIGR01990 bPGM beta-phosphoglu 79.7 2.1 4.5E-05 34.6 3.3 84 63-167 87-172 (185)
148 TIGR01422 phosphonatase phosph 79.6 1.1 2.4E-05 38.6 1.7 15 25-39 3-17 (253)
149 COG0546 Gph Predicted phosphat 79.4 1.1 2.5E-05 38.0 1.7 93 62-173 88-182 (220)
150 PLN02811 hydrolase 79.3 2.3 5E-05 35.9 3.6 99 62-174 77-178 (220)
151 PLN02779 haloacid dehalogenase 79.2 1.2 2.6E-05 39.6 1.9 19 21-39 37-55 (286)
152 PRK14501 putative bifunctional 79.2 2.4 5.2E-05 42.7 4.2 58 22-96 490-549 (726)
153 PRK10748 flavin mononucleotide 78.7 0.99 2.1E-05 38.8 1.2 28 63-90 113-140 (238)
154 PRK14988 GMP/IMP nucleotidase; 78.0 1.2 2.7E-05 37.9 1.5 16 24-39 10-25 (224)
155 TIGR01454 AHBA_synth_RP 3-amin 77.8 0.81 1.7E-05 38.1 0.3 13 27-39 1-13 (205)
156 TIGR01491 HAD-SF-IB-PSPlk HAD- 77.4 3.7 8E-05 33.5 4.2 39 62-100 79-118 (201)
157 PRK09449 dUMP phosphatase; Pro 77.3 1.1 2.4E-05 37.7 1.0 14 25-38 4-17 (224)
158 TIGR02254 YjjG/YfnB HAD superf 77.1 1.2 2.6E-05 37.1 1.2 16 25-40 2-17 (224)
159 TIGR01428 HAD_type_II 2-haloal 77.1 1.1 2.5E-05 36.9 1.0 15 25-39 2-16 (198)
160 COG0241 HisB Histidinol phosph 76.9 4 8.6E-05 34.3 4.2 51 23-86 4-55 (181)
161 PLN02919 haloacid dehalogenase 76.6 3.2 6.9E-05 43.8 4.4 94 64-174 162-256 (1057)
162 TIGR01990 bPGM beta-phosphoglu 76.4 1.1 2.4E-05 36.2 0.8 15 26-40 1-15 (185)
163 TIGR01493 HAD-SF-IA-v2 Haloaci 76.3 1.2 2.6E-05 35.8 1.0 79 62-164 89-167 (175)
164 PRK13222 phosphoglycolate phos 75.8 1.4 3E-05 36.9 1.2 16 24-39 6-21 (226)
165 TIGR01449 PGP_bact 2-phosphogl 75.8 1 2.2E-05 37.4 0.4 13 27-39 1-13 (213)
166 TIGR02247 HAD-1A3-hyp Epoxide 75.7 1.6 3.4E-05 36.4 1.5 15 25-39 3-17 (211)
167 TIGR01491 HAD-SF-IB-PSPlk HAD- 75.6 1.5 3.3E-05 35.9 1.4 16 24-39 4-19 (201)
168 PRK10826 2-deoxyglucose-6-phos 74.9 1.5 3.2E-05 37.0 1.1 17 23-39 6-22 (222)
169 PLN02954 phosphoserine phospha 74.8 1.6 3.6E-05 36.6 1.5 39 62-100 83-122 (224)
170 TIGR02137 HSK-PSP phosphoserin 74.7 3.7 8.1E-05 34.7 3.6 40 62-101 67-106 (203)
171 PRK10563 6-phosphogluconate ph 74.6 1.7 3.6E-05 36.5 1.4 17 23-39 3-19 (221)
172 TIGR00338 serB phosphoserine p 74.3 1.7 3.6E-05 36.4 1.3 18 22-39 12-29 (219)
173 TIGR01489 DKMTPPase-SF 2,3-dik 74.3 1.8 3.8E-05 35.0 1.5 39 62-100 71-110 (188)
174 PLN02954 phosphoserine phospha 74.2 5.2 0.00011 33.5 4.4 18 22-39 10-27 (224)
175 PF13419 HAD_2: Haloacid dehal 74.0 1.5 3.1E-05 34.4 0.9 14 27-40 1-14 (176)
176 TIGR01493 HAD-SF-IA-v2 Haloaci 73.7 0.67 1.4E-05 37.4 -1.2 13 27-39 2-14 (175)
177 COG0560 SerB Phosphoserine pho 73.4 1.8 3.8E-05 37.0 1.3 42 62-103 76-118 (212)
178 PF03767 Acid_phosphat_B: HAD 73.2 2 4.2E-05 37.2 1.5 77 22-100 70-153 (229)
179 TIGR01509 HAD-SF-IA-v3 haloaci 73.1 1.7 3.7E-05 34.8 1.1 14 27-40 2-15 (183)
180 PLN02382 probable sucrose-phos 72.9 2.2 4.8E-05 40.2 1.9 17 22-38 7-23 (413)
181 KOG3109 Haloacid dehalogenase- 72.7 4.9 0.00011 34.9 3.8 97 62-170 99-195 (244)
182 COG0637 Predicted phosphatase/ 70.9 2 4.4E-05 36.6 1.1 15 25-39 3-17 (221)
183 PRK11133 serB phosphoserine ph 69.6 2.8 6E-05 38.2 1.8 39 62-100 180-219 (322)
184 TIGR02726 phenyl_P_delta pheny 69.3 18 0.0004 29.7 6.4 66 23-101 6-73 (169)
185 TIGR02137 HSK-PSP phosphoserin 67.9 2.6 5.6E-05 35.7 1.1 13 26-38 3-15 (203)
186 PLN02575 haloacid dehalogenase 67.5 3.5 7.6E-05 38.6 2.0 19 21-39 128-146 (381)
187 PRK06698 bifunctional 5'-methy 67.2 2.5 5.4E-05 40.1 1.0 16 25-40 242-257 (459)
188 TIGR01680 Veg_Stor_Prot vegeta 66.2 12 0.00026 33.4 5.0 79 23-101 100-184 (275)
189 TIGR01545 YfhB_g-proteo haloac 65.9 3.1 6.8E-05 35.3 1.2 37 63-99 94-132 (210)
190 PLN02940 riboflavin kinase 64.8 3.1 6.6E-05 38.7 1.0 16 24-39 11-26 (382)
191 TIGR02471 sucr_syn_bact_C sucr 64.4 2.8 6E-05 35.8 0.6 13 26-38 1-13 (236)
192 PRK09456 ?-D-glucose-1-phospha 63.7 3.7 8E-05 34.0 1.3 14 26-39 2-15 (199)
193 PRK09552 mtnX 2-hydroxy-3-keto 61.7 4.3 9.2E-05 34.3 1.3 16 24-39 3-18 (219)
194 TIGR01488 HAD-SF-IB Haloacid D 60.8 3.8 8.2E-05 32.8 0.8 14 26-39 1-14 (177)
195 PLN02205 alpha,alpha-trehalose 59.7 7.7 0.00017 40.1 2.9 17 22-38 594-610 (854)
196 PF08235 LNS2: LNS2 (Lipin/Ned 59.4 19 0.00042 29.5 4.7 51 26-87 1-52 (157)
197 TIGR01489 DKMTPPase-SF 2,3-dik 58.8 13 0.00028 29.8 3.7 17 24-40 1-17 (188)
198 PF05116 S6PP: Sucrose-6F-phos 58.4 5 0.00011 34.9 1.2 13 24-36 2-14 (247)
199 cd06539 CIDE_N_A CIDE_N domain 57.0 24 0.00051 25.6 4.2 23 17-39 33-55 (78)
200 TIGR01511 ATPase-IB1_Cu copper 56.6 23 0.00051 34.6 5.6 38 63-100 405-443 (562)
201 PF05822 UMPH-1: Pyrimidine 5' 55.3 9.9 0.00021 33.5 2.5 41 59-99 86-127 (246)
202 COG1011 Predicted hydrolase (H 55.3 7.2 0.00016 32.5 1.6 18 23-40 3-20 (229)
203 COG0546 Gph Predicted phosphat 53.7 27 0.00058 29.5 4.9 18 23-40 3-20 (220)
204 TIGR01490 HAD-SF-IB-hyp1 HAD-s 53.5 14 0.0003 30.2 3.1 39 63-101 87-126 (202)
205 COG0560 SerB Phosphoserine pho 53.1 18 0.00039 30.8 3.8 16 22-37 3-18 (212)
206 KOG4549 Magnesium-dependent ph 52.7 1.2E+02 0.0026 24.3 8.1 78 23-100 4-83 (144)
207 cd01615 CIDE_N CIDE_N domain, 51.5 32 0.0007 24.8 4.2 23 17-39 33-55 (78)
208 TIGR02244 HAD-IG-Ncltidse HAD 51.5 19 0.00042 33.2 3.9 42 59-100 180-222 (343)
209 PF06941 NT5C: 5' nucleotidase 51.2 10 0.00022 31.3 1.9 29 62-90 72-101 (191)
210 TIGR01490 HAD-SF-IB-hyp1 HAD-s 51.1 6.7 0.00015 32.2 0.8 13 27-39 2-14 (202)
211 smart00266 CAD Domains present 51.0 32 0.00069 24.6 4.1 23 17-39 31-53 (74)
212 PF02358 Trehalose_PPase: Treh 47.1 14 0.00031 31.5 2.2 50 28-94 1-52 (235)
213 PLN03063 alpha,alpha-trehalose 46.2 23 0.0005 36.4 3.8 61 23-97 506-568 (797)
214 PRK11590 hypothetical protein; 44.9 33 0.00071 28.7 4.0 16 23-38 5-20 (211)
215 PLN03064 alpha,alpha-trehalose 42.5 35 0.00077 35.7 4.5 68 23-98 590-659 (934)
216 cd06537 CIDE_N_B CIDE_N domain 41.7 53 0.0012 23.9 4.1 17 23-39 38-54 (81)
217 PF11019 DUF2608: Protein of u 41.1 14 0.00031 32.4 1.3 14 23-36 19-32 (252)
218 COG4502 5'(3')-deoxyribonucleo 40.3 27 0.00058 28.5 2.6 38 63-100 68-107 (180)
219 PRK11133 serB phosphoserine ph 39.5 37 0.00081 30.9 3.8 17 22-38 108-124 (322)
220 PF00702 Hydrolase: haloacid d 39.3 33 0.00071 27.9 3.2 41 61-101 125-166 (215)
221 PF12710 HAD: haloacid dehalog 38.9 27 0.00058 28.0 2.6 36 65-100 87-127 (192)
222 PF06941 NT5C: 5' nucleotidase 38.9 15 0.00033 30.3 1.1 24 157-180 139-165 (191)
223 PF00702 Hydrolase: haloacid d 38.8 18 0.0004 29.4 1.5 15 25-39 2-16 (215)
224 cd06538 CIDE_N_FSP27 CIDE_N do 38.1 70 0.0015 23.2 4.2 17 23-39 38-54 (79)
225 PLN02919 haloacid dehalogenase 37.9 20 0.00044 37.9 2.0 18 23-40 74-91 (1057)
226 COG3769 Predicted hydrolase (H 37.4 91 0.002 27.4 5.5 55 23-100 6-61 (274)
227 KOG2134 Polynucleotide kinase 37.3 55 0.0012 30.8 4.5 19 22-40 73-91 (422)
228 TIGR01545 YfhB_g-proteo haloac 36.5 54 0.0012 27.7 4.1 17 23-39 4-20 (210)
229 PF06888 Put_Phosphatase: Puta 35.5 52 0.0011 28.6 3.9 40 61-100 69-111 (234)
230 PRK14751 tetracycline resistan 34.6 13 0.00029 21.0 0.0 8 228-235 18-25 (28)
231 PLN02177 glycerol-3-phosphate 30.1 25 0.00055 34.1 1.1 21 78-98 122-142 (497)
232 COG1778 Low specificity phosph 29.5 32 0.00069 28.4 1.4 64 23-99 7-72 (170)
233 PF06888 Put_Phosphatase: Puta 28.1 16 0.00035 31.8 -0.5 16 25-40 1-16 (234)
234 PF02017 CIDE-N: CIDE-N domain 28.0 36 0.00077 24.6 1.3 23 17-39 33-55 (78)
235 cd06536 CIDE_N_ICAD CIDE_N dom 27.5 1.2E+02 0.0026 22.0 4.0 17 23-39 41-57 (80)
236 TIGR01525 ATPase-IB_hvy heavy 26.4 1.5E+02 0.0033 28.8 5.8 40 62-101 383-424 (556)
237 cd03210 GST_C_Pi GST_C family, 26.2 92 0.002 23.5 3.5 34 194-227 91-124 (126)
238 KOG2914 Predicted haloacid-hal 25.8 98 0.0021 26.7 3.9 91 61-168 90-184 (222)
239 PLN02499 glycerol-3-phosphate 22.6 54 0.0012 31.8 1.9 21 80-100 110-130 (498)
240 cd06535 CIDE_N_CAD CIDE_N doma 22.4 76 0.0016 22.9 2.1 20 17-36 33-52 (77)
No 1
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=1.6e-41 Score=286.06 Aligned_cols=167 Identities=22% Similarity=0.345 Sum_probs=133.9
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhc
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~ 101 (239)
++|+||||||||||+|+.... ...++++||||++||++|+++|||+|||||++.||+++++.++.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~---------------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPA---------------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCcEEEEeCCCceEcccccC---------------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcc
Confidence 578999999999999874221 13578999999999999999999999999999999999999874
Q ss_pred C--CCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccCCC
Q 041910 102 K--LKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFPEA 179 (239)
Q Consensus 102 ~--~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p~~ 179 (239)
. ...++.++| ++|...+... ...++.++|||+.+|.++ ++.++++|||||||+|.++.+||+||+. +.+
T Consensus 84 ~~~~~~~i~~~l--d~~~~~~~~~--~~~g~~~vKdL~~lw~~l----~~~~~~~ntiiVDd~p~~~~~~P~N~i~-I~~ 154 (195)
T TIGR02245 84 LTNPNYKITFLL--DSTAMITVHT--PRRGKFDVKPLGVIWALL----PEFYSMKNTIMFDDLRRNFLMNPQNGLK-IRP 154 (195)
T ss_pred cCCccceEEEEe--ccccceeeEe--eccCcEEEeecHHhhhhc----ccCCCcccEEEEeCCHHHHhcCCCCccc-cCC
Confidence 2 223566665 6664322211 112345699999999874 4557999999999999999999999774 446
Q ss_pred CCCC---CCCCCccCCcchHHHHHHhhccCCCHHHHHHh
Q 041910 180 YNPE---DVNDKVLKPNGELAKYLEGLAEAEDVQSYVKE 215 (239)
Q Consensus 180 ~~~~---~~~D~~L~~~~~L~~~L~~L~~~~DVr~~l~~ 215 (239)
|.++ +.+|++|. .|++||+.|+.++|||++.++
T Consensus 155 f~~~~~~~~~D~eL~---~L~~yL~~la~~~Dvr~~~~~ 190 (195)
T TIGR02245 155 FKKAHANRGTDQELL---KLTQYLKTIAELEDFSSLDHK 190 (195)
T ss_pred ccccCCCCcccHHHH---HHHHHHHHHhcCcccchhhhc
Confidence 8763 47899999 999999999999999999775
No 2
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.8e-40 Score=289.72 Aligned_cols=170 Identities=24% Similarity=0.290 Sum_probs=145.0
Q ss_pred CCCcceEEEeCCCceeEeec--cC-CCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAH--RA-NKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLY 97 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~--~~-~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~ 97 (239)
..+|++|||||||||+|++. +. ..+.+......+.....++|.+|||+++||..++++||++||||+.+.||.+|++
T Consensus 86 ~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D 165 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLD 165 (262)
T ss_pred cCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHH
Confidence 55899999999999999983 33 1222222222222335689999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccC
Q 041910 98 CAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFP 177 (239)
Q Consensus 98 ~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p 177 (239)
.||+.. +.+.+++||++|+.. .+.|+|||+.+ | +|+++||||||||.+|.+||+||| ++
T Consensus 166 ~LD~~~-~i~~~RlyR~~C~~~---------~g~yvKdls~~--------~--~dL~~viIiDNsP~sy~~~p~NgI-pI 224 (262)
T KOG1605|consen 166 ILDPDR-KIISHRLYRDSCTLK---------DGNYVKDLSVL--------G--RDLSKVIIVDNSPQSYRLQPENGI-PI 224 (262)
T ss_pred HccCCC-CeeeeeecccceEeE---------CCcEEEEccee--------c--cCcccEEEEcCChHHhccCccCCC-cc
Confidence 999944 589999999999864 35799999999 4 599999999999999999999965 77
Q ss_pred CCCCCCCCCCCccCCcchHHHHHHhhccCCCHHHHHHh
Q 041910 178 EAYNPEDVNDKVLKPNGELAKYLEGLAEAEDVQSYVKE 215 (239)
Q Consensus 178 ~~~~~~~~~D~~L~~~~~L~~~L~~L~~~~DVr~~l~~ 215 (239)
++|.. +..|+||+ .|+|||++|+.++|||..++.
T Consensus 225 ~sw~~-d~~D~eLL---~LlpfLe~L~~~~Dvr~~l~~ 258 (262)
T KOG1605|consen 225 KSWFD-DPTDTELL---KLLPFLEALAFVDDVRPILAR 258 (262)
T ss_pred ccccc-CCChHHHH---HHHHHHHHhcccccHHHHHHH
Confidence 78976 78899999 999999999999999999987
No 3
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=7.6e-37 Score=251.34 Aligned_cols=160 Identities=29% Similarity=0.356 Sum_probs=131.8
Q ss_pred cceEEEeCCCceeEeeccCCCC--CCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhc
Q 041910 24 KKLLVLSPSRLLVHRAHRANKA--TIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~--~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~ 101 (239)
|++|||||||||||+...+... ........+.....++|++|||+.+||++|+++|+|+||||+.+.||++|++.|+|
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 6899999999999997654221 11111111111246899999999999999999999999999999999999999998
Q ss_pred CCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccCCCCC
Q 041910 102 KLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFPEAYN 181 (239)
Q Consensus 102 ~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p~~~~ 181 (239)
.. ..+.++++|++|... ++.++|||++++ +++++||||||+|.++..||.|++ .+.+|.
T Consensus 81 ~~-~~f~~~l~r~~~~~~---------~~~~~K~L~~l~----------~~~~~vIiVDD~~~~~~~~~~NgI-~i~~f~ 139 (162)
T TIGR02251 81 GG-KVISRRLYRESCVFT---------NGKYVKDLSLVG----------KDLSKVIIIDNSPYSYSLQPDNAI-PIKSWF 139 (162)
T ss_pred CC-CEEeEEEEccccEEe---------CCCEEeEchhcC----------CChhhEEEEeCChhhhccCccCEe-ecCCCC
Confidence 75 368899999999753 234899999993 689999999999999999999976 455688
Q ss_pred CCCCCCCccCCcchHHHHHHhhccCCC
Q 041910 182 PEDVNDKVLKPNGELAKYLEGLAEAED 208 (239)
Q Consensus 182 ~~~~~D~~L~~~~~L~~~L~~L~~~~D 208 (239)
| +.+|++|. .|++||+.|+.++|
T Consensus 140 ~-~~~D~~L~---~l~~~L~~l~~~~~ 162 (162)
T TIGR02251 140 G-DPNDTELL---NLIPFLEGLRFEDD 162 (162)
T ss_pred C-CCCHHHHH---HHHHHHHHHhccCC
Confidence 7 68999999 99999999998876
No 4
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=1.9e-36 Score=246.74 Aligned_cols=159 Identities=30% Similarity=0.413 Sum_probs=118.9
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCC
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLK 104 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~ 104 (239)
|||||||||||||+....... ....... ...++++++|||+++||++++++|+|+|||+|++.||++|++.|+|.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~--~~~~~~~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~- 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLP--YDFKIID-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG- 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT---SEEEET-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT-
T ss_pred CEEEEeCCCcEEEEeecCCCC--cccceec-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc-
Confidence 689999999999998654220 0000001 235789999999999999999999999999999999999999999964
Q ss_pred CcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccCCCCCCCC
Q 041910 105 DKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFPEAYNPED 184 (239)
Q Consensus 105 ~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p~~~~~~~ 184 (239)
..+.++|+|++|... ++.++|||+++ + +++++||||||+|.++..||+|++.+ .+|.++.
T Consensus 77 ~~~~~~~~r~~~~~~---------~~~~~KdL~~l--------~--~~~~~vvivDD~~~~~~~~~~N~i~v-~~f~~~~ 136 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFD---------KGSYIKDLSKL--------G--RDLDNVVIVDDSPRKWALQPDNGIPV-PPFFGDT 136 (159)
T ss_dssp SSEEEEEEGGGSEEE---------TTEEE--GGGS--------S--S-GGGEEEEES-GGGGTTSGGGEEE-----SSCH
T ss_pred ccccccccccccccc---------ccccccchHHH--------h--hccccEEEEeCCHHHeeccCCceEEe-ccccCCC
Confidence 478999999999743 12457999999 3 58999999999999999999997644 4588732
Q ss_pred CCCCccCCcchHHHHHHhhccCCCHH
Q 041910 185 VNDKVLKPNGELAKYLEGLAEAEDVQ 210 (239)
Q Consensus 185 ~~D~~L~~~~~L~~~L~~L~~~~DVr 210 (239)
.+|++|. .|++||++|+.++|||
T Consensus 137 ~~D~~L~---~l~~~L~~l~~~~Dvr 159 (159)
T PF03031_consen 137 PNDRELL---RLLPFLEELAKEDDVR 159 (159)
T ss_dssp TT--HHH---HHHHHHHHHHTHS-CH
T ss_pred cchhHHH---HHHHHHHHhCcccCCC
Confidence 7899999 9999999999999998
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.95 E-value=3.1e-28 Score=199.20 Aligned_cols=138 Identities=20% Similarity=0.171 Sum_probs=108.0
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCC----C----CCCCC---Cccc--cceEEEeCCChHHHHHHHHhCcEEEEeCCC
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATI----P----QNRMP---DAIN--GGHLVFKRPFVEDFMKFCFERFEVGIWSSA 87 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~----~----~~~~~---d~~~--~~~~v~~RP~l~eFL~~l~~~fevvIwTsa 87 (239)
..+|++|||||||||||+...+..... + ....+ .|.+ ..+++.+|||+.+||+.+++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 468999999999999999876522110 0 00111 1332 347899999999999999999999999999
Q ss_pred ccccHHHHHHHHhcCCCCcE-EEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhh
Q 041910 88 KERNVDTVLYCAMGKLKDKL-LFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 88 ~~~ya~~il~~id~~~~~~~-~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
.+.||+++++.|+|.+. .+ ..+++|++|. +.++|||+.++ ++++++||||||+|.+|
T Consensus 83 ~~~yA~~vl~~ldp~~~-~F~~ri~~rd~~~------------~~~~KdL~~i~---------~~d~~~vvivDd~~~~~ 140 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGK-YFGDRIISRDESG------------SPHTKSLLRLF---------PADESMVVIIDDREDVW 140 (156)
T ss_pred cHHHHHHHHHHhCcCCC-eeccEEEEeccCC------------CCccccHHHHc---------CCCcccEEEEeCCHHHh
Confidence 99999999999999752 45 3467899995 14689998874 26899999999999999
Q ss_pred ccCCCCCcccCCCCC
Q 041910 167 LLNPPNTSIFPEAYN 181 (239)
Q Consensus 167 ~~~p~N~ii~p~~~~ 181 (239)
..||+|++ .+.+|.
T Consensus 141 ~~~~~N~i-~i~~~~ 154 (156)
T TIGR02250 141 PWHKRNLI-QIEPYN 154 (156)
T ss_pred hcCccCEE-EeCCcc
Confidence 99999965 555563
No 6
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.92 E-value=7.7e-25 Score=196.04 Aligned_cols=155 Identities=24% Similarity=0.248 Sum_probs=137.9
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHh
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id 100 (239)
...+.||||+|.++|||..+... .++.+.+|||++.||..++++|||||||+.+.-||.++++.+|
T Consensus 186 ~Qp~yTLVleledvLVhpdws~~--------------tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lD 251 (393)
T KOG2832|consen 186 EQPPYTLVLELEDVLVHPDWSYK--------------TGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALD 251 (393)
T ss_pred cCCCceEEEEeeeeEeccchhhh--------------cCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcC
Confidence 44799999999999999986431 4789999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccCCCC
Q 041910 101 GKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFPEAY 180 (239)
Q Consensus 101 ~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p~~~ 180 (239)
|.+ .+.+.++|++|... .+..+|||++|+ +|++++|+||=.+..+.+||+|.+ ..++|
T Consensus 252 P~g--~IsYkLfr~~t~y~---------~G~HvKdls~LN----------Rdl~kVivVd~d~~~~~l~P~N~l-~l~~W 309 (393)
T KOG2832|consen 252 PKG--YISYKLFRGATKYE---------EGHHVKDLSKLN----------RDLQKVIVVDFDANSYKLQPENML-PLEPW 309 (393)
T ss_pred Ccc--eEEEEEecCccccc---------Cccchhhhhhhc----------cccceeEEEEccccccccCccccc-ccCcC
Confidence 985 68889999998753 245699999994 799999999999999999999965 55679
Q ss_pred CCCCCCCCccCCcchHHHHHHhhcc--CCCHHHHHHh
Q 041910 181 NPEDVNDKVLKPNGELAKYLEGLAE--AEDVQSYVKE 215 (239)
Q Consensus 181 ~~~~~~D~~L~~~~~L~~~L~~L~~--~~DVr~~l~~ 215 (239)
.| +.+|+.|. +|++||+.|+. ++|||++|+.
T Consensus 310 ~G-n~dDt~L~---dL~~FL~~ia~~~~eDvR~vL~~ 342 (393)
T KOG2832|consen 310 SG-NDDDTSLF---DLLAFLEYIAQQQVEDVRPVLQS 342 (393)
T ss_pred CC-Ccccchhh---hHHHHHHHHHHccHHHHHHHHHH
Confidence 98 78899999 99999999975 4899999987
No 7
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.90 E-value=2e-23 Score=168.85 Aligned_cols=143 Identities=31% Similarity=0.296 Sum_probs=111.5
Q ss_pred CcceEEEeCCCceeEeeccCCCCCC----CCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATI----PQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYC 98 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~----~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~ 98 (239)
+|++|||||||||+|+......... +....+......+.+..|||+.+||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 5899999999999999742211100 000011122246889999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccCC
Q 041910 99 AMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFPE 178 (239)
Q Consensus 99 id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p~ 178 (239)
+++.. ..+.+++++++|... |+.+.|+|++++ .+.+++|+|||++..+..++.|++ .++
T Consensus 81 l~~~~-~~f~~i~~~~d~~~~---------KP~~~k~l~~l~----------~~p~~~i~i~Ds~~~~~aa~~ngI-~i~ 139 (148)
T smart00577 81 LDPKK-YFGYRRLFRDECVFV---------KGKYVKDLSLLG----------RDLSNVIIIDDSPDSWPFHPENLI-PIK 139 (148)
T ss_pred hCcCC-CEeeeEEECcccccc---------CCeEeecHHHcC----------CChhcEEEEECCHHHhhcCccCEE-Eec
Confidence 98743 245788999999742 455899999993 678999999999999999999965 556
Q ss_pred CCCCCCCCC
Q 041910 179 AYNPEDVND 187 (239)
Q Consensus 179 ~~~~~~~~D 187 (239)
+|.+ +.+|
T Consensus 140 ~f~~-~~~d 147 (148)
T smart00577 140 PWFG-DPDD 147 (148)
T ss_pred CcCC-CCCC
Confidence 7887 4555
No 8
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.88 E-value=4.1e-23 Score=188.96 Aligned_cols=171 Identities=23% Similarity=0.268 Sum_probs=139.6
Q ss_pred cCCCCcceEEEeCCCceeEeeccCCCC-CCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHH
Q 041910 19 NLGPKKKLLVLSPSRLLVHRAHRANKA-TIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLY 97 (239)
Q Consensus 19 ~~~~~k~lLVLDLDeTLv~~~~~~~~~-~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~ 97 (239)
.-+..+++|++|||+||+|+....... .+.....-+.....++|.+||+|++|+..+++.|++++||++.+.||+++++
T Consensus 207 ~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d 286 (390)
T COG5190 207 KSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLD 286 (390)
T ss_pred cCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHHH
Confidence 346689999999999999998755221 1110000011124689999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCcccC
Q 041910 98 CAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTSIFP 177 (239)
Q Consensus 98 ~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ii~p 177 (239)
.|++.+ .+.++++|.+|... .+.|+|||+++ + +++..|||||++|.++.++|.|++ ++
T Consensus 287 ~l~~~k--~~~~~lfr~sc~~~---------~G~~ikDis~i--------~--r~l~~viiId~~p~SY~~~p~~~i-~i 344 (390)
T COG5190 287 ILDSDK--VFSHRLFRESCVSY---------LGVYIKDISKI--------G--RSLDKVIIIDNSPASYEFHPENAI-PI 344 (390)
T ss_pred hccccc--eeehhhhcccceec---------cCchhhhHHhh--------c--cCCCceEEeeCChhhhhhCcccee-cc
Confidence 999876 78889999999852 12489999999 3 789999999999999999999966 55
Q ss_pred CCCCCCCCCCCccCCcchHHHHHHhhcc--CCCHHHHHHh
Q 041910 178 EAYNPEDVNDKVLKPNGELAKYLEGLAE--AEDVQSYVKE 215 (239)
Q Consensus 178 ~~~~~~~~~D~~L~~~~~L~~~L~~L~~--~~DVr~~l~~ 215 (239)
.+|.+ ++.|.+|. .|+++|+.|+. ..||+..+..
T Consensus 345 ~~W~~-d~~d~el~---~ll~~le~L~~~~~~d~~~~l~~ 380 (390)
T COG5190 345 EKWIS-DEHDDELL---NLLPFLEDLPDRDLKDVSSILQS 380 (390)
T ss_pred Ccccc-cccchhhh---hhcccccccccccchhhhhhhhh
Confidence 56987 57888888 99999999998 7899988765
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.58 E-value=2.5e-15 Score=144.84 Aligned_cols=131 Identities=22% Similarity=0.156 Sum_probs=98.3
Q ss_pred CcceEEEeCCCceeEeeccCCCCC---CC----CC--CCCC---cc----ccceEEEeCCChHHHHHHHHhCcEEEEeCC
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKAT---IP----QN--RMPD---AI----NGGHLVFKRPFVEDFMKFCFERFEVGIWSS 86 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~---~~----~~--~~~d---~~----~~~~~v~~RP~l~eFL~~l~~~fevvIwTs 86 (239)
+++.||+|||.||+|+.......+ .+ .. ..-| ++ -..+++.+||++.+||+++++.|++.|||.
T Consensus 145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyTm 224 (635)
T KOG0323|consen 145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYTM 224 (635)
T ss_pred hcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEec
Confidence 446999999999999986552111 11 10 0001 11 135899999999999999999999999999
Q ss_pred CccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhh
Q 041910 87 AKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 87 a~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
|.+.||..|++.|||+++-.-..|++|+. . ...-++||..++ +.+.+++|||||+...|
T Consensus 225 g~R~YA~~i~~liDP~~~lF~dRIisrde---~---------~~~kt~dL~~~~---------p~g~smvvIIDDr~dVW 283 (635)
T KOG0323|consen 225 GTRDYALEIAKLIDPEGKYFGDRIISRDE---S---------PFFKTLDLVLLF---------PCGDSMVVIIDDRSDVW 283 (635)
T ss_pred cchHHHHHHHHHhCCCCccccceEEEecC---C---------CcccccccccCC---------CCCCccEEEEeCccccc
Confidence 99999999999999987522234556665 1 113368888884 36789999999999999
Q ss_pred ccCCCCCc
Q 041910 167 LLNPPNTS 174 (239)
Q Consensus 167 ~~~p~N~i 174 (239)
..++.|.|
T Consensus 284 ~~~~~nLI 291 (635)
T KOG0323|consen 284 PDHKRNLI 291 (635)
T ss_pred cCCCcceE
Confidence 99998865
No 10
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.08 E-value=1.5e-06 Score=68.54 Aligned_cols=66 Identities=12% Similarity=-0.033 Sum_probs=47.2
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCC-ccccHHHHHHHHh
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSA-KERNVDTVLYCAM 100 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa-~~~ya~~il~~id 100 (239)
+++|+||||||+......... .+... .. ...|++.++|+.+.+ .+.++|.|++ .+.++..+++...
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~------~~~~~-~~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGE------DPIID-LE---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccC------Ccchh-hH---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 578999999999774211000 00000 01 478999999999986 5999999999 8899988887753
No 11
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.00 E-value=1.9e-05 Score=62.65 Aligned_cols=124 Identities=15% Similarity=0.138 Sum_probs=79.8
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCc---cccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDA---INGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~---~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
++|||+|+||+....-+. -+.|..+++.. ..+|..|..||++.+||+++... +-+..+|..-+.-|-+.+..++-
T Consensus 2 ~i~~d~d~t~wdhh~iSs-l~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~ 80 (164)
T COG4996 2 AIVFDADKTLWDHHNISS-LEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL 80 (164)
T ss_pred cEEEeCCCcccccccchh-cCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence 589999999995543221 12233333222 23678999999999999999975 88999999999999999999886
Q ss_pred CCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhh
Q 041910 102 KLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 102 ~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
.+. |-++ -..+.+++.+ +..+=|+.+... .+....++++|.+||+..-+
T Consensus 81 ~~y--Fhy~---------ViePhP~K~~-ML~~llr~i~~e----r~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 81 LQY--FHYI---------VIEPHPYKFL-MLSQLLREINTE----RNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred hhh--EEEE---------EecCCChhHH-HHHHHHHHHHHh----hccccCcceEEEEecccccH
Confidence 542 2111 0122333211 222334444321 13346789999999998765
No 12
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.96 E-value=2.6e-05 Score=64.94 Aligned_cols=137 Identities=12% Similarity=-0.046 Sum_probs=79.5
Q ss_pred cceEEEeCCCceeEeeccC-CCCCC--CCCCCCCc-cccceEEEeCCChHHHHHHHHh-CcEEEEeCCC-ccccHHHHHH
Q 041910 24 KKLLVLSPSRLLVHRAHRA-NKATI--PQNRMPDA-INGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSA-KERNVDTVLY 97 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~-~~~~~--~~~~~~d~-~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa-~~~ya~~il~ 97 (239)
+.++|+|||+||+...... ..... ......+. ...+..+..+|++.++|+.|.+ .+.++|-|++ ...+++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 4689999999999655332 11100 00001000 0123467889999999999985 5999999988 8899999999
Q ss_pred HHhcC--C-C----CcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCC
Q 041910 98 CAMGK--L-K----DKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNP 170 (239)
Q Consensus 98 ~id~~--~-~----~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p 170 (239)
.+.-. + + ..+..+...+.. .+ -|....++.....-.+.+.+.+++|+|||++.-...--
T Consensus 82 ~~~l~~~~~~~~~~~~Fd~iv~~~~~-----------~~---~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~ 147 (174)
T TIGR01685 82 TFEITYAGKTVPMHSLFDDRIEIYKP-----------NK---AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVW 147 (174)
T ss_pred hCCcCCCCCcccHHHhceeeeeccCC-----------ch---HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHH
Confidence 87632 1 1 122332222110 01 12222222211000001367899999999999887766
Q ss_pred CCCc
Q 041910 171 PNTS 174 (239)
Q Consensus 171 ~N~i 174 (239)
.+|+
T Consensus 148 ~aGi 151 (174)
T TIGR01685 148 GYGV 151 (174)
T ss_pred HhCC
Confidence 6655
No 13
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.92 E-value=1.2e-05 Score=72.06 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=57.3
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeC-CChHHHHHHHHhC-cEEEEeCCCccccHHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKR-PFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYC 98 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~R-P~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~ 98 (239)
-.-++++|+||||||+.... .|..| |++.+.|+++.+. +.++|||++.++++..+++.
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~--------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE--------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred cccceEEEEecCCCCcCCCC--------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
Confidence 34577999999999997642 24588 9999999999987 89999999999999999988
Q ss_pred HhcCCCCcEEEEeeCCcc
Q 041910 99 AMGKLKDKLLFVWDQEEC 116 (239)
Q Consensus 99 id~~~~~~~~~v~~r~~C 116 (239)
+.-.. .+..+.+..+.
T Consensus 183 lGLd~--YFdvIIs~Gdv 198 (301)
T TIGR01684 183 VKLDR--YFDIIISGGHK 198 (301)
T ss_pred cCCCc--ccCEEEECCcc
Confidence 76442 23344444443
No 14
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.88 E-value=2.6e-05 Score=69.85 Aligned_cols=74 Identities=19% Similarity=0.135 Sum_probs=58.1
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeC-CChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKR-PFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~R-P~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
..++++|+||||||+.... .|..| |++.+.|+++.+. +.++|||++.++++..+++.+
T Consensus 126 ~~~~~i~~D~D~TL~~~~~--------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE--------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred eeccEEEEecCCCccCCCC--------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc
Confidence 4678999999999998742 24688 9999999999985 899999999999999999987
Q ss_pred hcCCCCcEEEEeeCCccc
Q 041910 100 MGKLKDKLLFVWDQEECT 117 (239)
Q Consensus 100 d~~~~~~~~~v~~r~~C~ 117 (239)
.-.. .+..+...++..
T Consensus 186 gL~~--yFDvII~~g~i~ 201 (303)
T PHA03398 186 KLEG--YFDIIICGGRKA 201 (303)
T ss_pred CCCc--cccEEEECCCcc
Confidence 6542 333344444443
No 15
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=97.76 E-value=2.4e-05 Score=72.45 Aligned_cols=124 Identities=19% Similarity=0.173 Sum_probs=88.6
Q ss_pred CCcceEEEeCCCceeEeeccCCCC---C--------CCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccc
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKA---T--------IPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKER 90 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~---~--------~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ 90 (239)
.++..||.|+|.|.+|+...+... . ....+.+-..-..+++..||.+..|+...++.|++.++|.+...
T Consensus 24 ~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~~ 103 (390)
T COG5190 24 DKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTRA 103 (390)
T ss_pred CcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeecccc
Confidence 367778999999999998654110 0 00011111111368999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhh
Q 041910 91 NVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 91 ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
||+.++.+++|.+...-..+..++. . .....|-+++++. .+.+.++++||++..+
T Consensus 104 ~~~~~~~i~d~~g~~~~d~~~~~~~----------~--~~~~~~s~~~l~p---------~~~n~~vi~~d~~~~~ 158 (390)
T COG5190 104 YAERIAKIIDPTGKLFNDRILSRDE----------S--GSLSQKSLSRLFP---------KDQNMVVIIDDRGDVW 158 (390)
T ss_pred chhhhhhcccccccccccccccccc----------c--ccchhhhhhhcCc---------cccccccccccccccC
Confidence 9999999999876411111111111 1 2345788999853 5889999999999998
No 16
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.44 E-value=0.00022 Score=54.14 Aligned_cols=61 Identities=13% Similarity=0.043 Sum_probs=49.3
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
++|||+||||+....... ....+..+|++.++|+.+.++ +.++|.|++...++..+++.+.
T Consensus 1 ~~vfD~D~tl~~~~~~~~--------------~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA--------------EIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc--------------ccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcC
Confidence 489999999987753211 022457899999999999987 9999999999999999988864
No 17
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.26 E-value=0.00032 Score=63.49 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=47.8
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceE-EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHH
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHL-VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYC 98 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~-v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~ 98 (239)
|.+|+||+|||+||+...-.... . .++. .-..|++.++|+.+.+. +.++|-|+..+..|..+++.
T Consensus 1 ~~~k~~v~DlDnTlw~gv~~e~g-------~-----~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 1 PALKVLVLDLDNTLWGGVLGEDG-------I-----DNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CCeEEEEEcCCCCCCCCEEccCC-------c-----cccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 35789999999999965421100 0 0111 12468999999999965 89999999999999998887
No 18
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.16 E-value=0.0013 Score=54.27 Aligned_cols=51 Identities=8% Similarity=-0.105 Sum_probs=37.1
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCcc
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKE 89 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~ 89 (239)
+.|.||+||||+-..... . ..-.+...|++.++|++|.+. +.++|-|++..
T Consensus 2 ~~~~~D~Dgtl~~~~~~~------~--------~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV------H--------EIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC------C--------CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 678899999998321100 0 011345679999999999965 99999999875
No 19
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.14 E-value=0.0016 Score=53.85 Aligned_cols=53 Identities=8% Similarity=-0.016 Sum_probs=38.8
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCcc
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKE 89 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~ 89 (239)
.|.|++|+||||+....... . ..-.+...|++.++|++|.+. +.++|-|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~-----~--------~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~ 56 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYV-----K--------SPDEWIPIPGSIEAIARLKQAGYRVVVATNQSG 56 (181)
T ss_pred ccEEEEECCCCcccCCcccc-----C--------CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 57899999999976542110 0 011345789999999999986 99999998763
No 20
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.04 E-value=0.0011 Score=55.11 Aligned_cols=132 Identities=17% Similarity=0.060 Sum_probs=63.4
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCc----cccceEEEeCCChHHHHHHHHhC-cEEEEeCC-CccccHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDA----INGGHLVFKRPFVEDFMKFCFER-FEVGIWSS-AKERNVDTVL 96 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~----~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTs-a~~~ya~~il 96 (239)
-++++|+|||.||+........ ..|....... ...+..+.+.|++.+.|+.+.+. ..++|=|. ..++.|..++
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~-~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L 80 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHV-GPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL 80 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS--S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhcc-CCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence 4689999999999966533211 1111111111 12567889999999999999974 88999884 5678999999
Q ss_pred HHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 97 YCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 97 ~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+.+.-.... ...+--.+-+...... .+.|....+.|.+ + .+.+-+.++.+||...+...
T Consensus 81 ~~l~i~~~~-~~~~~~~~~F~~~eI~---~gsK~~Hf~~i~~---~------tgI~y~eMlFFDDe~~N~~~ 139 (169)
T PF12689_consen 81 KLLEIDDAD-GDGVPLIEYFDYLEIY---PGSKTTHFRRIHR---K------TGIPYEEMLFFDDESRNIEV 139 (169)
T ss_dssp HHTT-C-----------CCECEEEES---SS-HHHHHHHHHH---H------H---GGGEEEEES-HHHHHH
T ss_pred HhcCCCccc-cccccchhhcchhhee---cCchHHHHHHHHH---h------cCCChhHEEEecCchhccee
Confidence 998744000 0000000101000000 0112233444443 2 13567889999999887644
No 21
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.04 E-value=0.0011 Score=51.72 Aligned_cols=63 Identities=19% Similarity=0.028 Sum_probs=46.2
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCc--------cccHHHH
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAK--------ERNVDTV 95 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~--------~~ya~~i 95 (239)
+.|+||+||||+...... . ........|++.++|++|.+. +.++|-|.+. ..++..+
T Consensus 1 k~~~~D~dgtL~~~~~~~-~-------------~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~ 66 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYV-D-------------DEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARR 66 (132)
T ss_pred CEEEEeCCCceecCCCCC-C-------------CHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHH
Confidence 478999999999531100 0 111346789999999999865 9999999998 6677777
Q ss_pred HHHHhc
Q 041910 96 LYCAMG 101 (239)
Q Consensus 96 l~~id~ 101 (239)
++.+.-
T Consensus 67 l~~~~l 72 (132)
T TIGR01662 67 LEELGV 72 (132)
T ss_pred HHHCCC
Confidence 777643
No 22
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.87 E-value=0.0023 Score=51.17 Aligned_cols=53 Identities=9% Similarity=-0.053 Sum_probs=38.8
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCcc
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKE 89 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~ 89 (239)
+.|+||+||||+......... ........|++.++|++|.+. |.++|-|+...
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~------------~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPR------------SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCC------------CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 478999999999875321000 111235789999999999865 99999999764
No 23
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.69 E-value=0.0054 Score=54.67 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=54.6
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCc-EEEEeCCCccccHHHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERF-EVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~f-evvIwTsa~~~ya~~il~~i 99 (239)
...+-++|+|||.|||...... -..=|.+-+-|..+.+.+ .+++||.|.+++|..-++.+
T Consensus 119 ~~~phVIVfDlD~TLItd~~~v-------------------~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEGDV-------------------RIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCCCcEEEEECCCcccccCCcc-------------------ccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh
Confidence 3466789999999999775321 023377888999999875 89999999999999999998
Q ss_pred hcCCCCcEEEEeeCCc
Q 041910 100 MGKLKDKLLFVWDQEE 115 (239)
Q Consensus 100 d~~~~~~~~~v~~r~~ 115 (239)
.-.+ .|..++.+.+
T Consensus 180 ~L~~--~Fd~ii~~G~ 193 (297)
T PF05152_consen 180 KLEG--YFDIIICGGN 193 (297)
T ss_pred CCcc--ccEEEEeCCc
Confidence 7443 3444544443
No 24
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.66 E-value=0.0029 Score=55.22 Aligned_cols=90 Identities=4% Similarity=-0.047 Sum_probs=52.0
Q ss_pred CcceEEEeCCCceeEeecc--CCCCCCCCC---C--CCCcc-----ccceEEEeCCChHHHHHHHHhC-cEEEEeCCC--
Q 041910 23 KKKLLVLSPSRLLVHRAHR--ANKATIPQN---R--MPDAI-----NGGHLVFKRPFVEDFMKFCFER-FEVGIWSSA-- 87 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~--~~~~~~~~~---~--~~d~~-----~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa-- 87 (239)
++..++|||||||+++..- ......... . .+.+. ...-.....|+..+||+++.+. +.++|=|+.
T Consensus 62 ~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~ 141 (237)
T TIGR01672 62 PPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTP 141 (237)
T ss_pred CCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3449999999999998752 100000000 0 00110 0111223344499999999976 899999998
Q ss_pred --ccccHHHHHHHHhcCCCCcEEEEeeCC
Q 041910 88 --KERNVDTVLYCAMGKLKDKLLFVWDQE 114 (239)
Q Consensus 88 --~~~ya~~il~~id~~~~~~~~~v~~r~ 114 (239)
.+..++.+++.+.-.. .+..++..+
T Consensus 142 ~k~~~~a~~ll~~lGi~~--~f~~i~~~d 168 (237)
T TIGR01672 142 GKTDTVSKTLAKNFHIPA--MNPVIFAGD 168 (237)
T ss_pred CcCHHHHHHHHHHhCCch--heeEEECCC
Confidence 4457888877765332 344444444
No 25
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.46 E-value=0.0078 Score=58.31 Aligned_cols=116 Identities=9% Similarity=0.127 Sum_probs=67.6
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCcc----------
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKE---------- 89 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~---------- 89 (239)
.++.+++.||+||||+...... .++.. ..-+.++-|++.+.|+.|.+. |.|+|+|....
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~---~~~~~-------~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGK---VFPKG-------PDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred CccCcEEEEECCCCccccCCCc---cCCCC-------HHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 5678999999999999653211 11110 011234679999999999975 99999999666
Q ss_pred --ccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeec-chhhcccccCCCCCCCCCCEEEEECCc
Q 041910 90 --RNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDL-NKLWQKINTSNKYHFNESDTLLIDDNP 163 (239)
Q Consensus 90 --~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL-~~l~~~~~~~~~~~~dl~~tViIDDsp 163 (239)
..+..+++.+.- .+..+..-+.|... ++ ++..+..+ +.+ . .+.+.+++++++|-|+.
T Consensus 235 ~~~ki~~iL~~lgi----pfdviia~~~~~~R--KP-----~pGm~~~a~~~~-~-----~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGV----PFQVFIAIGAGFYR--KP-----LTGMWDHLKEEA-N-----DGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCC----ceEEEEeCCCCCCC--CC-----CHHHHHHHHHhc-C-----cccCCCHHHeEEeCCcc
Confidence 245666666542 24444444444221 00 01111111 111 0 02236889999999997
No 26
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.43 E-value=0.012 Score=48.40 Aligned_cols=57 Identities=9% Similarity=0.097 Sum_probs=38.6
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCcc
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKE 89 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~ 89 (239)
+.+++++|+||||+....... ....+ .. ....-|++.+.|+.|.+ .+.++|-|+...
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~-----~~~~~----~~-~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV-----FPTSA----SD-WRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc-----ccCCh----HH-eEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 467889999999997542110 00000 11 12245999999999975 699999999765
No 27
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.41 E-value=0.0074 Score=49.43 Aligned_cols=52 Identities=8% Similarity=-0.003 Sum_probs=37.9
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCC
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSA 87 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa 87 (239)
+.+.||.||||++..... +... ..-.+..-|++.+.|++|.+. |.++|-|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~~----~~~~-------~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD----FQVD-------ALEKLRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCc----cccC-------CHHHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 678999999999853210 0000 112457889999999999975 999999995
No 28
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.37 E-value=0.014 Score=46.13 Aligned_cols=52 Identities=21% Similarity=0.108 Sum_probs=37.4
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccce-EEEeCCChHHHHHHHH-hCcEEEEeCCCccccHH
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGH-LVFKRPFVEDFMKFCF-ERFEVGIWSSAKERNVD 93 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~-~v~~RP~l~eFL~~l~-~~fevvIwTsa~~~ya~ 93 (239)
+++++||||||+..... .| .....+.+.+-|+.+. +.+.|++.|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----------------~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----------------DYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCC-----------------cccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 58999999999754211 11 1236677888888885 56999999998887766
No 29
>PRK06769 hypothetical protein; Validated
Probab=96.06 E-value=0.018 Score=47.47 Aligned_cols=49 Identities=4% Similarity=-0.008 Sum_probs=35.2
Q ss_pred ceEEEeCCCcee-EeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCcc
Q 041910 25 KLLVLSPSRLLV-HRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKE 89 (239)
Q Consensus 25 ~lLVLDLDeTLv-~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~ 89 (239)
+.|.||+||||. |+.. ...-.+...|++.++|++|.+. +.++|-|++..
T Consensus 5 ~~~~~d~d~~~~~~~~~----------------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 5 QAIFIDRDGTIGGDTTI----------------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred cEEEEeCCCcccCCCCC----------------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 568899999995 2110 0001234679999999999865 89999998763
No 30
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.95 E-value=0.015 Score=47.64 Aligned_cols=52 Identities=13% Similarity=0.262 Sum_probs=34.4
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCC
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSS 86 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTs 86 (239)
|++.+||||||+....... ++.+ ..=..+.-|++.+-|+.+.+. |.|+|+|.
T Consensus 1 Kia~fD~DgTLi~~~s~~~---f~~~-------~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK---FPKD-------PDDWKFFPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT---S-SS-------TCGGEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCc---CcCC-------HHHhhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 5788999999998864221 1110 011356778999999999975 99999995
No 31
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.94 E-value=0.0042 Score=51.77 Aligned_cols=40 Identities=20% Similarity=0.141 Sum_probs=35.5
Q ss_pred EEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHh
Q 041910 61 LVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id 100 (239)
.+..+||+.++|+.+.+.+.++|-|++...+++.+++.+.
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~g 105 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLG 105 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcC
Confidence 3456899999999999779999999999999999999875
No 32
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.50 E-value=0.016 Score=51.42 Aligned_cols=79 Identities=13% Similarity=0.037 Sum_probs=49.9
Q ss_pred CCCcceEEEeCCCceeEeeccC---CCCCCCCCCCCCc--cccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRA---NKATIPQNRMPDA--INGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDT 94 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~---~~~~~~~~~~~d~--~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~ 94 (239)
..+++.+|||+|||++..+.-. .....+.+.. +. -...-....-||+.+||+++.+. ..++|-|.....+.+.
T Consensus 72 ~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~-~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~ 150 (266)
T TIGR01533 72 KDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPE-TWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAA 150 (266)
T ss_pred CCCCCEEEEeCccccccChHHHHHHhcCCCcCCHH-HHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHH
Confidence 3568899999999999765210 0000111000 00 01112334679999999999876 7899999988777776
Q ss_pred HHHHHh
Q 041910 95 VLYCAM 100 (239)
Q Consensus 95 il~~id 100 (239)
.++.+.
T Consensus 151 T~~~Lk 156 (266)
T TIGR01533 151 TLKNLK 156 (266)
T ss_pred HHHHHH
Confidence 666554
No 33
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=95.46 E-value=0.03 Score=45.20 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=43.5
Q ss_pred ceEEEeCCCceeEeec-cCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHh
Q 041910 25 KLLVLSPSRLLVHRAH-RANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~-~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id 100 (239)
++++||+||||+.... ..... +. .-.++.+|+. -+++|.+ .+.++|-|+.....+..+++.+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~----------~~-~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~g 66 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNG----------EE-IKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLG 66 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCC----------cE-EEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcC
Confidence 5789999999995321 11000 00 1134677776 6888886 48999999999999988887764
No 34
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.27 E-value=0.061 Score=40.54 Aligned_cols=52 Identities=12% Similarity=0.009 Sum_probs=40.7
Q ss_pred EEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 27 LVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 27 LVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
+++|+||||+.-. ..=|+..+||+.+.+. ..+++.|.++..-.+.+++.+-.
T Consensus 1 ~l~D~dGvl~~g~-----------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYNGN-----------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEETT-----------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEeCC-----------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 5799999999742 1459999999999986 89999999998877777777753
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.89 E-value=0.035 Score=43.91 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=61.0
Q ss_pred eEEEeCCChHHHHHHHH-hCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecch
Q 041910 60 HLVFKRPFVEDFMKFCF-ERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNK 138 (239)
Q Consensus 60 ~~v~~RP~l~eFL~~l~-~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~ 138 (239)
......|++.++|+.+. +.+.++|.|.+.+..+..+++.+.-.. .+..++..+++... ++. ...+.+=++.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~~~~--Kp~----~~~~~~~~~~ 145 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDVGSR--KPD----PDAYRRALEK 145 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGSSSS--TTS----HHHHHHHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchhhhh--hhH----HHHHHHHHHH
Confidence 46789999999999999 679999999999999999998875332 34455555544321 000 0122233333
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhh
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
+ +.+.+++|+|||++...
T Consensus 146 ~----------~~~p~~~~~vgD~~~d~ 163 (176)
T PF13419_consen 146 L----------GIPPEEILFVGDSPSDV 163 (176)
T ss_dssp H----------TSSGGGEEEEESSHHHH
T ss_pred c----------CCCcceEEEEeCCHHHH
Confidence 3 25679999999999554
No 36
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.37 E-value=0.08 Score=43.45 Aligned_cols=57 Identities=21% Similarity=0.107 Sum_probs=43.6
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCc-cccHHHHHHHH
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAK-ERNVDTVLYCA 99 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~-~~ya~~il~~i 99 (239)
.+-..||+|+||||..... ....|++.++|++|.+. +.++|-|.+. ...+..+++.+
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~---------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~ 81 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH---------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL 81 (170)
T ss_pred CCCCEEEEecCCccccCCC---------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc
Confidence 4667899999999996531 12468999999999976 9999999988 56666555543
No 37
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.28 E-value=0.051 Score=45.69 Aligned_cols=85 Identities=18% Similarity=0.110 Sum_probs=58.0
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...|++.++|+++.+. +.++|-|++...++...++.+.-.. .+.+++..+..... ++. ...+.+=++++
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~--KP~----~~~~~~~~~~~- 163 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD--FFDAVITSEEEGVE--KPH----PKIFYAALKRL- 163 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH--hccEEEEeccCCCC--CCC----HHHHHHHHHHc-
Confidence 46899999999999976 9999999999999998888865322 34555554443210 000 01233444444
Q ss_pred cccccCCCCCCCCCCEEEEECCch
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPY 164 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~ 164 (239)
+ .+.+++|+|.|++.
T Consensus 164 -------~--~~~~~~~~igDs~~ 178 (221)
T TIGR02253 164 -------G--VKPEEAVMVGDRLD 178 (221)
T ss_pred -------C--CChhhEEEECCChH
Confidence 2 57789999999984
No 38
>PTZ00445 p36-lilke protein; Provisional
Probab=94.11 E-value=0.087 Score=45.30 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=71.5
Q ss_pred CcceEEEeCCCceeE--eeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCcccc--------
Q 041910 23 KKKLLVLSPSRLLVH--RAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKERN-------- 91 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~--~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~y-------- 91 (239)
+=+++++|||.|||. +.... .++.....+.-..||.+.++++.|.+ .+.|+|=|-+.+.-
T Consensus 42 GIk~Va~D~DnTlI~~HsgG~~---------~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~ 112 (219)
T PTZ00445 42 GIKVIASDFDLTMITKHSGGYI---------DPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPR 112 (219)
T ss_pred CCeEEEecchhhhhhhhccccc---------CCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcc
Confidence 567889999999984 43211 00000112344689999999999986 58887777666633
Q ss_pred ---HHHHHHHHhcCC--CCcEEEEeeCCcccccCC--ccccCC----CCC-ceEeec--chhhcccccCCCCCCCCCCEE
Q 041910 92 ---VDTVLYCAMGKL--KDKLLFVWDQEECTDSGF--KSLEKK----DKP-LFFKDL--NKLWQKINTSNKYHFNESDTL 157 (239)
Q Consensus 92 ---a~~il~~id~~~--~~~~~~v~~r~~C~~~~~--~~~e~~----~k~-~~~KDL--~~l~~~~~~~~~~~~dl~~tV 157 (239)
.+.+++...... ...+..++ |-.-++ .+..|. .|| .-+|.- +.+-++. +.+.+.+|
T Consensus 113 ~Isg~~li~~~lk~s~~~~~i~~~~----~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~------gl~peE~L 182 (219)
T PTZ00445 113 YISGDRMVEAALKKSKCDFKIKKVY----AYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDF------NVNPDEIL 182 (219)
T ss_pred eechHHHHHHHHHhcCccceeeeee----eeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHc------CCCHHHeE
Confidence 344555544321 11222221 111000 011110 111 113333 5555542 36789999
Q ss_pred EEECCchhhccCCCCC
Q 041910 158 LIDDNPYKALLNPPNT 173 (239)
Q Consensus 158 iIDDsp~~~~~~p~N~ 173 (239)
.|||++.++..--.-|
T Consensus 183 FIDD~~~NVeaA~~lG 198 (219)
T PTZ00445 183 FIDDDMNNCKNALKEG 198 (219)
T ss_pred eecCCHHHHHHHHHCC
Confidence 9999999886544433
No 39
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.98 E-value=0.14 Score=45.28 Aligned_cols=131 Identities=10% Similarity=-0.044 Sum_probs=80.6
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
.++++.+++|+||||.......+-.+. ........|++.++|+.+.+. +.++|-|+.....++.+++.+
T Consensus 155 ~~~~~~~~~D~dgtl~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 155 PGLPKAVIFDIDGTLAKMGGRSPYDWT----------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCCEEEEECCCcCcCCCCCCccchh----------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 335689999999999976432210000 011235689999999999876 899999999999999999998
Q ss_pred hcCCCCcEEEEeeCCcccccCCccccCCCCC---ceEeecchhhcccccCCCCCC-CCCCEEEEECCchhhccCCCCCc
Q 041910 100 MGKLKDKLLFVWDQEECTDSGFKSLEKKDKP---LFFKDLNKLWQKINTSNKYHF-NESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 100 d~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~---~~~KDL~~l~~~~~~~~~~~~-dl~~tViIDDsp~~~~~~p~N~i 174 (239)
...+. .+..+...+.+.. +.......|+ ...+-|..+ + . +.+.+|+|+|++.-...--.+|+
T Consensus 225 ~~~~~-~f~~i~~~~~~~~--~~~~~~~~kp~p~~~~~~l~~~--------~--~~~~~~~~~vgD~~~d~~~a~~~Gi 290 (300)
T PHA02530 225 RQTDI-WFDDLIGRPPDMH--FQREQGDKRPDDVVKEEIFWEK--------I--APKYDVLLAVDDRDQVVDMWRRIGL 290 (300)
T ss_pred HHcCC-chhhhhCCcchhh--hcccCCCCCCcHHHHHHHHHHH--------h--ccCceEEEEEcCcHHHHHHHHHhCC
Confidence 75431 2333333331100 0000000121 112334433 1 3 45899999999998887666665
No 40
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.92 E-value=0.076 Score=46.68 Aligned_cols=56 Identities=14% Similarity=0.011 Sum_probs=42.9
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
.+++++||||||+.... ...|...+.|+.+.+. ..++|=|......+..+++.+..
T Consensus 4 ~kli~~DlDGTLl~~~~----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999996421 1235577889998875 88888888777888888888753
No 41
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.88 E-value=0.14 Score=47.37 Aligned_cols=54 Identities=9% Similarity=0.068 Sum_probs=40.4
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCC
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSA 87 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa 87 (239)
++++|+||=||||+...... +.. .....+..+|++.++|++|.+. +.++|-|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~----y~~-------~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD----FQV-------DSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc----ccc-------cCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 57899999999999875311 000 0122467899999999999864 999999993
No 42
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=93.81 E-value=0.067 Score=47.11 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=66.4
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...||+.++|+.+.+. +.++|-|++...++..+++.+.-. ..+..+.+.+.+... ++. ...+.+=++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~--~~Fd~ii~~~d~~~~--KP~----Pe~~~~a~~~l- 178 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME--GFFSVVLAAEDVYRG--KPD----PEMFMYAAERL- 178 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH--hhCcEEEecccCCCC--CCC----HHHHHHHHHHh-
Confidence 45689999999999965 999999999999999999987422 245556666655321 110 01344555555
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ .+.+++|+|+|++.-...--..|+
T Consensus 179 -------~--~~p~~~l~IgDs~~Di~aA~~aG~ 203 (260)
T PLN03243 179 -------G--FIPERCIVFGNSNSSVEAAHDGCM 203 (260)
T ss_pred -------C--CChHHeEEEcCCHHHHHHHHHcCC
Confidence 2 678999999999877665555554
No 43
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=93.78 E-value=0.1 Score=43.80 Aligned_cols=95 Identities=19% Similarity=0.207 Sum_probs=64.5
Q ss_pred EEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecch
Q 041910 61 LVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNK 138 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~ 138 (239)
.+...||+.++|+++.+ .+.++|-|++.+.++..+++.+.-. ..+..+.+.+.+... ++ ++ .+.+=+++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~--Kp-----~p~~~~~~~~~ 150 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD--EFFDVVITLDDVEHA--KP-----DPEPVLKALEL 150 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh--hceeEEEecCcCCCC--CC-----CcHHHHHHHHH
Confidence 34678999999999986 5899999999999999999887533 246666666655321 11 12 22233333
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ + .+.+++++|+|++.-...--..|+
T Consensus 151 ~--------~--~~~~~~~~iGDs~~Di~aa~~aG~ 176 (214)
T PRK13288 151 L--------G--AKPEEALMVGDNHHDILAGKNAGT 176 (214)
T ss_pred c--------C--CCHHHEEEECCCHHHHHHHHHCCC
Confidence 3 2 467999999999876655444444
No 44
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=93.60 E-value=0.11 Score=45.21 Aligned_cols=58 Identities=14% Similarity=0.023 Sum_probs=43.5
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHH-hCcEEEEeCCCccccHHHHHHHHhc
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCF-ERFEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~-~~fevvIwTsa~~~ya~~il~~id~ 101 (239)
..+++++||||||+..... ..|...+-|+.+. +...++|=|......+.++++.+.-
T Consensus 2 ~~kli~~DlDGTLl~~~~~----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKT----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred CeeEEEEcCCCCccCCCCc----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 3678999999999987531 5667777787775 4577777777777788888877764
Q ss_pred C
Q 041910 102 K 102 (239)
Q Consensus 102 ~ 102 (239)
.
T Consensus 60 ~ 60 (264)
T COG0561 60 D 60 (264)
T ss_pred C
Confidence 4
No 45
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=93.56 E-value=0.3 Score=42.66 Aligned_cols=78 Identities=6% Similarity=-0.015 Sum_probs=44.3
Q ss_pred CcceEEEeCCCceeEeeccC--CCCCCCCCC-CC----Ccc---cc--ceEEEeCCChHHHHHHHHh-CcEEEEeCCCc-
Q 041910 23 KKKLLVLSPSRLLVHRAHRA--NKATIPQNR-MP----DAI---NG--GHLVFKRPFVEDFMKFCFE-RFEVGIWSSAK- 88 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~--~~~~~~~~~-~~----d~~---~~--~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~- 88 (239)
++..+|+|+|||+++++.-. ....+..+. .. .+. .. .......|++.+||+.+.+ .+.|++=|+..
T Consensus 62 ~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~ 141 (237)
T PRK11009 62 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTA 141 (237)
T ss_pred CCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 45599999999999854211 111110000 00 110 01 1223344559999999965 58999999854
Q ss_pred ---cccHHHHHHHHh
Q 041910 89 ---ERNVDTVLYCAM 100 (239)
Q Consensus 89 ---~~ya~~il~~id 100 (239)
...++.+++.+.
T Consensus 142 ~k~~~t~~~Llk~~g 156 (237)
T PRK11009 142 TKTETVSKTLADDFH 156 (237)
T ss_pred cccHHHHHHHHHHcC
Confidence 346666666443
No 46
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.42 E-value=0.16 Score=43.91 Aligned_cols=55 Identities=9% Similarity=-0.007 Sum_probs=42.3
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCccccHH--HHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVD--TVLYCA 99 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~--~il~~i 99 (239)
+-.++++|+||||+... ..-|+..++|+++.+ .+.++|-|++.++.++ ..++.+
T Consensus 7 ~~~~~~~D~dG~l~~~~-----------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN-----------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred cCCEEEEecccccccCC-----------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 34578899999998653 146999999999996 4899999998877665 455554
Q ss_pred h
Q 041910 100 M 100 (239)
Q Consensus 100 d 100 (239)
.
T Consensus 64 g 64 (242)
T TIGR01459 64 G 64 (242)
T ss_pred C
Confidence 3
No 47
>PRK08238 hypothetical protein; Validated
Probab=93.42 E-value=0.033 Score=53.47 Aligned_cols=38 Identities=13% Similarity=-0.018 Sum_probs=34.0
Q ss_pred EeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 63 FKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
-.+|++.++|+.+.+. ..++|=|++.+.+++++++.+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lG 110 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLG 110 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 4789999999999865 8999999999999999999873
No 48
>PRK10444 UMP phosphatase; Provisional
Probab=93.31 E-value=0.28 Score=42.95 Aligned_cols=53 Identities=9% Similarity=0.127 Sum_probs=40.7
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHh
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id 100 (239)
+++++||||||+.... .=|+..++++.+.+ ...+++-|.....-+..+++.+.
T Consensus 2 ~~v~~DlDGtL~~~~~-----------------------~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~ 55 (248)
T PRK10444 2 KNVICDIDGVLMHDNV-----------------------AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA 55 (248)
T ss_pred cEEEEeCCCceEeCCe-----------------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 4789999999988741 24788888888886 47788888887777777777765
No 49
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=93.19 E-value=0.16 Score=41.34 Aligned_cols=63 Identities=8% Similarity=0.093 Sum_probs=38.5
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHH---HHHHHH
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVD---TVLYCA 99 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~---~il~~i 99 (239)
++++|+||||+.+.....-.. . ++.- +..|+..++++.+.+. +.+++-|+....-+. ..+..+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~--------~-~~~~--~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVP--------I-IGKD--WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred CEEEecCCCCccccccccccc--------c-cccC--cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 478999999997642210000 0 0111 4579999999999986 666666665544443 455553
No 50
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.14 E-value=0.12 Score=44.39 Aligned_cols=52 Identities=8% Similarity=-0.070 Sum_probs=39.0
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
++++||||||++... .-|...++|+.+.+. ..+++-|.-+...+..+++.+.
T Consensus 1 li~~DlDGTLl~~~~-----------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg 53 (225)
T TIGR02461 1 VIFTDLDGTLLPPGY-----------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELG 53 (225)
T ss_pred CEEEeCCCCCcCCCC-----------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 478999999998321 124578899999875 7888888877777777777764
No 51
>PLN02645 phosphoglycolate phosphatase
Probab=93.11 E-value=0.24 Score=44.61 Aligned_cols=55 Identities=2% Similarity=-0.116 Sum_probs=41.4
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHh
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id 100 (239)
+-+++++|+||||+.... .=|+..++|+.+.+ ...+++-|.........+++.+.
T Consensus 27 ~~~~~~~D~DGtl~~~~~-----------------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~ 82 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK-----------------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE 82 (311)
T ss_pred hCCEEEEeCcCCeEeCCc-----------------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 456889999999987531 12888899988886 48888888888777777776654
No 52
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=92.89 E-value=0.14 Score=43.26 Aligned_cols=54 Identities=11% Similarity=0.012 Sum_probs=41.0
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
++++||||||+..... + .-+ ..+.|+.+.+. ..++|-|......+.++++.+..
T Consensus 1 ~i~~DlDGTLL~~~~~--------------------~-~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSY--------------------D-WQP-AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred CEEEeCCCCCcCCCCC--------------------C-cHH-HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4789999999965310 0 112 56888888865 78999999999999999988753
No 53
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=92.85 E-value=0.18 Score=41.96 Aligned_cols=95 Identities=14% Similarity=0.060 Sum_probs=62.5
Q ss_pred EEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecch
Q 041910 61 LVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNK 138 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~ 138 (239)
.+...|++.++|+++.+ .+.++|-|.+...++..+++.+.-.. .+..+++.+++... ++ ++ .+.+=+++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~--KP-----~~~~~~~~~~~ 143 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP--LFDHVIGSDEVPRP--KP-----APDIVREALRL 143 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh--heeeEEecCcCCCC--CC-----ChHHHHHHHHH
Confidence 35678999999999986 59999999999999999888765332 45556555544210 00 11 22222333
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ +.+.+++|+|+|++.-...--..|+
T Consensus 144 ~----------~~~~~~~l~igD~~~Di~aA~~~Gi 169 (205)
T TIGR01454 144 L----------DVPPEDAVMVGDAVTDLASARAAGT 169 (205)
T ss_pred c----------CCChhheEEEcCCHHHHHHHHHcCC
Confidence 3 2568999999999865544334444
No 54
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=92.81 E-value=0.13 Score=41.39 Aligned_cols=85 Identities=15% Similarity=0.193 Sum_probs=52.9
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
+..+|++.++|+.+.+ .+.++|.|++.... ..++..+.-.. .+..+++.+.+... ++ .+ .+.+=++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~--~f~~i~~~~~~~~~--KP-----~~~~~~~~~~~~ 153 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD--LFDVVIFSGDVGRG--KP-----DPDIYLLALKKL 153 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH--HCCEEEEcCCCCCC--CC-----CHHHHHHHHHHc
Confidence 5678999999999986 49999999999888 65555432221 34444443332210 00 11 122223333
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhh
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
+.+.+++|+|+|++...
T Consensus 154 ----------~~~~~~~~~vgD~~~di 170 (183)
T TIGR01509 154 ----------GLKPEECLFVDDSPAGI 170 (183)
T ss_pred ----------CCCcceEEEEcCCHHHH
Confidence 25789999999998654
No 55
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.71 E-value=0.17 Score=48.38 Aligned_cols=124 Identities=20% Similarity=0.228 Sum_probs=64.4
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCC---hHHHHHHHHhC-cEEEEeCCCccccHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPF---VEDFMKFCFER-FEVGIWSSAKERNVDTVL 96 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~---l~eFL~~l~~~-fevvIwTsa~~~ya~~il 96 (239)
.+.++.||||||+||+--.-.-.. ....+.++. ..=|- +++|+..+.+. +-++|=|-.....|
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedG-------v~GI~Ls~~--~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da---- 285 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDG-------VDGIRLSNS--AEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDA---- 285 (574)
T ss_pred CcccceEEEecCCccccccccccc-------ccceeecCC--CCchhHHHHHHHHHHHHhccEEEEEecCCchhhH----
Confidence 567899999999999965421110 000111100 01122 34445555543 55666666444444
Q ss_pred HHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhccCCCC
Q 041910 97 YCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPN 172 (239)
Q Consensus 97 ~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N 172 (239)
+..+..+++.+. --++.+... -.|..| .-+++++..+++ ..++-.|.|||+|.....--.+
T Consensus 286 ~evF~khp~MiL---keedfa~~~---iNW~~K---~eNirkIAkklN------lg~dSmvFiDD~p~ErE~vk~~ 346 (574)
T COG3882 286 KEVFRKHPDMIL---KEEDFAVFQ---INWDPK---AENIRKIAKKLN------LGLDSMVFIDDNPAERELVKRE 346 (574)
T ss_pred HHHHhhCCCeEe---eHhhhhhhe---ecCCcc---hhhHHHHHHHhC------CCccceEEecCCHHHHHHHHhc
Confidence 444554543432 223322111 112223 356677766542 4689999999999877554444
No 56
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=92.66 E-value=0.15 Score=42.42 Aligned_cols=94 Identities=10% Similarity=0.048 Sum_probs=61.2
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
+..+|++.++|+.+.+. +.++|-|++...+++.+++.+.-.. .+..+...+..... +-++ .+.+-++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~~-------Kp~p~~~~~~~~~~ 154 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK--YFSVLIGGDSLAQR-------KPHPDPLLLAAERL 154 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh--hCcEEEecCCCCCC-------CCChHHHHHHHHHc
Confidence 56899999999999865 8999999999999999999865321 23344444332110 0011 233344444
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ .+.+++++|+|++.-...--..|+
T Consensus 155 --------~--~~~~~~~~igDs~~d~~aa~~aG~ 179 (213)
T TIGR01449 155 --------G--VAPQQMVYVGDSRVDIQAARAAGC 179 (213)
T ss_pred --------C--CChhHeEEeCCCHHHHHHHHHCCC
Confidence 2 567899999999876644333333
No 57
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=92.65 E-value=0.21 Score=42.11 Aligned_cols=56 Identities=7% Similarity=0.008 Sum_probs=40.7
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcC
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGK 102 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~ 102 (239)
+++++||||||+.... ..-|...+-|+.+.+. ..++|=|......+..+++.+...
T Consensus 2 k~v~~DlDGTLl~~~~----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 5889999999995321 1344556677777765 788888888888888888777643
No 58
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=92.51 E-value=0.12 Score=43.46 Aligned_cols=52 Identities=10% Similarity=0.017 Sum_probs=36.9
Q ss_pred EEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHH-hCcEEEEeCCCccccHHHHHHHHh
Q 041910 27 LVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCF-ERFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 27 LVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~-~~fevvIwTsa~~~ya~~il~~id 100 (239)
|++||||||+..... .-|...+.|+.+. +...++|-|.-....+..++..+.
T Consensus 1 i~~DlDGTLl~~~~~----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 53 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELG 53 (254)
T ss_dssp EEEECCTTTCSTTSS----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTT
T ss_pred cEEEECCceecCCCe----------------------eCHHHHHHHHhhcccceEEEEEccCccccccccccccc
Confidence 689999999984321 2345667777777 457888888877778877777554
No 59
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.49 E-value=0.18 Score=41.97 Aligned_cols=53 Identities=13% Similarity=0.063 Sum_probs=40.8
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
++++|+||||+..... ...|.+.+.|+.+.+. ..++|-|......+..++..+
T Consensus 1 li~~D~DgTL~~~~~~---------------------~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAH---------------------ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred CEEEeCcCCCcCCCCC---------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 5789999999964210 1346778888888876 788888998888888888763
No 60
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.41 E-value=0.2 Score=43.93 Aligned_cols=57 Identities=11% Similarity=-0.031 Sum_probs=39.3
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
+.++++++||||||++.... .-|-..+-|+.+.+. ..++|-|.-....+..+++.+.
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~ 62 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTY----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLG 62 (271)
T ss_pred CCCeEEEEeCccCCcCCCCc----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhC
Confidence 45788999999999975211 112244557777655 7777777777777777888775
No 61
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.38 E-value=0.19 Score=46.89 Aligned_cols=95 Identities=8% Similarity=0.086 Sum_probs=67.5
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
....||+.+||++|.+. +.++|=|++.+.+++.+++.+.-. ..|..++..+++... ++. ...+.+-++++
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~--~yFd~Iv~sddv~~~--KP~----Peifl~A~~~l- 285 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR--GFFSVIVAAEDVYRG--KPD----PEMFIYAAQLL- 285 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH--HHceEEEecCcCCCC--CCC----HHHHHHHHHHc-
Confidence 35679999999999865 999999999999999999987533 256677777766421 110 01344555555
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ .+.+++|+|.|++.-...--..|+
T Consensus 286 -------g--l~Peecl~IGDS~~DIeAAk~AGm 310 (381)
T PLN02575 286 -------N--FIPERCIVFGNSNQTVEAAHDARM 310 (381)
T ss_pred -------C--CCcccEEEEcCCHHHHHHHHHcCC
Confidence 2 678999999999876655444444
No 62
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=92.32 E-value=0.2 Score=41.50 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=58.5
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...|++.++|+.+.+. +.++|-|.+...++..+++.+.-. ..+.+++..+..... ++. ...+.+=++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~--~~fd~i~~s~~~~~~--KP~----~~~~~~~~~~~- 161 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD--DPFDAVLSADAVRAY--KPA----PQVYQLALEAL- 161 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh--hhhheeEehhhcCCC--CCC----HHHHHHHHHHh-
Confidence 45679999999999986 999999999999999888775321 245555554443210 000 01222333344
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+ .+.+++|+|+|++.-...
T Consensus 162 -------~--~~p~~~~~vgD~~~Di~~ 180 (198)
T TIGR01428 162 -------G--VPPDEVLFVASNPWDLGG 180 (198)
T ss_pred -------C--CChhhEEEEeCCHHHHHH
Confidence 2 568999999999854433
No 63
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=92.19 E-value=0.19 Score=43.59 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=65.3
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...||+.++|+++.+ .+.++|=|++...++..+++.+.-.. .|..+...+.+... ++. ...+.+=++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~--~Fd~iv~~~~~~~~--KP~----p~~~~~a~~~~- 177 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD--FFQAVIIGSECEHA--KPH----PDPYLKALEVL- 177 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh--hCcEEEecCcCCCC--CCC----hHHHHHHHHHh-
Confidence 5568999999999975 49999999999999999999875332 35556566655321 110 01334445555
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ .+.+++|+|.|++.-...--..|+
T Consensus 178 -------~--~~~~~~l~vgDs~~Di~aA~~aGi 202 (248)
T PLN02770 178 -------K--VSKDHTFVFEDSVSGIKAGVAAGM 202 (248)
T ss_pred -------C--CChhHEEEEcCCHHHHHHHHHCCC
Confidence 2 567999999999976655444444
No 64
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=92.18 E-value=0.17 Score=42.36 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=57.5
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l~ 140 (239)
+..+|++.++|+++.+.+.++|=|++....+..+++.+.-.. .+.++++.+.+... ++ ++ .+.+=++++
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~--~fd~i~~~~~~~~~--KP-----~~~~~~~~~~~~- 165 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP--FFDDIFVSEDAGIQ--KP-----DKEIFNYALERM- 165 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh--hcCEEEEcCccCCC--CC-----CHHHHHHHHHHh-
Confidence 568999999999999889999999999999998888754222 34555554443211 00 11 222333333
Q ss_pred cccccCCCCCCCCCCEEEEECCch
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPY 164 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~ 164 (239)
+ +.+.+++|+|+|++.
T Consensus 166 -------~-~~~~~~~v~igD~~~ 181 (224)
T TIGR02254 166 -------P-KFSKEEVLMIGDSLT 181 (224)
T ss_pred -------c-CCCchheEEECCCcH
Confidence 1 357899999999973
No 65
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=91.96 E-value=0.25 Score=42.91 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=35.3
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
.+++++||||||+..... .-|...+-|+.+.+. ..++|=|.-....+..+++.+.
T Consensus 3 ~kli~~DlDGTLl~~~~~----------------------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~ 58 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHT----------------------ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELH 58 (270)
T ss_pred eEEEEEecCCcCcCCCCc----------------------cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhC
Confidence 478999999999975321 123344566666655 5666666665666666666654
No 66
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=91.80 E-value=0.49 Score=41.44 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=36.6
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
+++++|+||||+....+. -..=|+..++++.+.+. ..+++-|..+..-.+.+.+.+
T Consensus 2 k~i~~D~DGtl~~~~~~~-------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l 58 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS-------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL 58 (257)
T ss_pred CEEEEeCCCeEEeCCCcc-------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 478999999999774210 01346788888888865 777777765555444444444
No 67
>PRK11587 putative phosphatase; Provisional
Probab=91.68 E-value=0.36 Score=40.78 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=60.0
Q ss_pred EEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchh
Q 041910 61 LVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKL 139 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l 139 (239)
.+...||+.++|++|.+ .+.++|-|++...++..+++...-. .+..+.+.+++... ++. ...+.+-++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~---~~~~i~~~~~~~~~--KP~----p~~~~~~~~~~ 151 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP---APEVFVTAERVKRG--KPE----PDAYLLGAQLL 151 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC---CccEEEEHHHhcCC--CCC----cHHHHHHHHHc
Confidence 34678999999999985 5999999999988887766654321 22234444443211 110 11334555555
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
| ...+++|+|+|++.-...--..|+
T Consensus 152 --------g--~~p~~~l~igDs~~di~aA~~aG~ 176 (218)
T PRK11587 152 --------G--LAPQECVVVEDAPAGVLSGLAAGC 176 (218)
T ss_pred --------C--CCcccEEEEecchhhhHHHHHCCC
Confidence 3 578999999999966554444333
No 68
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=91.66 E-value=0.27 Score=44.34 Aligned_cols=56 Identities=9% Similarity=0.021 Sum_probs=39.5
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
++++++||||||+.... +++ +-..+-|+.+.+. ..|++-|+-+..-+..+.+.+.-
T Consensus 1 ~KLIftDLDGTLLd~~~--------------------~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEF--------------------NSY--GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred CcEEEEeCCCCCcCCCC--------------------cCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 36889999999997532 111 2256668888866 77888888777777777777753
No 69
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=91.58 E-value=0.3 Score=41.29 Aligned_cols=55 Identities=5% Similarity=-0.103 Sum_probs=32.0
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
.+++++||||||+..... ..|...+-|+.+.+. ..++|=|.-....+..+++.+.
T Consensus 3 ~kli~~DlDGTLl~~~~~----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~ 58 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRR----------------------LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIG 58 (230)
T ss_pred eeEEEEecCCCcCCCCCc----------------------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence 368999999999954311 223344555555543 4555555555555555555553
No 70
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=91.47 E-value=0.25 Score=42.75 Aligned_cols=13 Identities=15% Similarity=0.330 Sum_probs=11.4
Q ss_pred eEEEeCCCceeEe
Q 041910 26 LLVLSPSRLLVHR 38 (239)
Q Consensus 26 lLVLDLDeTLv~~ 38 (239)
++++||||||+..
T Consensus 1 li~~DlDGTLl~~ 13 (256)
T TIGR00099 1 LIFIDLDGTLLND 13 (256)
T ss_pred CEEEeCCCCCCCC
Confidence 4789999999975
No 71
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=91.41 E-value=0.34 Score=41.41 Aligned_cols=89 Identities=12% Similarity=0.056 Sum_probs=59.3
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecch
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNK 138 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~ 138 (239)
.+...|++.++|+.|.+. +.++|-|++...++..+++.+.-.. .+..+.+.+.+... ++ ++ .+.+-+++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~--KP-----~p~~~~~~~~~ 163 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ--RCAVLIGGDTLAER--KP-----HPLPLLVAAER 163 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh--cccEEEecCcCCCC--CC-----CHHHHHHHHHH
Confidence 356799999999999875 8999999999999988888764222 34444444443211 00 11 23344444
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+ + .+.+++|+|+|++.-...
T Consensus 164 l--------~--~~p~~~l~IGDs~~Di~a 183 (229)
T PRK13226 164 I--------G--VAPTDCVYVGDDERDILA 183 (229)
T ss_pred h--------C--CChhhEEEeCCCHHHHHH
Confidence 4 2 578999999999865543
No 72
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=91.26 E-value=0.43 Score=41.33 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=13.5
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
.+++++||||||+...
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (272)
T PRK10530 3 YRVIALDLDGTLLTPK 18 (272)
T ss_pred ccEEEEeCCCceECCC
Confidence 4789999999999653
No 73
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=91.22 E-value=0.67 Score=40.92 Aligned_cols=52 Identities=4% Similarity=-0.075 Sum_probs=35.1
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
+++++|+||||+.... .-|+..++|+.+.+. ..+++-|+.+..-...++..+
T Consensus 3 ~~~~~D~DGtl~~~~~-----------------------~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l 55 (279)
T TIGR01452 3 QGFIFDCDGVLWLGER-----------------------VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF 55 (279)
T ss_pred cEEEEeCCCceEcCCe-----------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 4688999999976421 346788888888864 677777775544444444444
No 74
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=91.13 E-value=0.29 Score=42.47 Aligned_cols=53 Identities=9% Similarity=-0.074 Sum_probs=39.2
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
++++||||||++.... .-+...+.++.+.+. ..++|=|.-....+..+++.+.
T Consensus 1 li~~DlDGTll~~~~~----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~ 54 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGY----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELG 54 (256)
T ss_pred CEEEcCCCCCcCCCCc----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 5789999999976420 112367889998876 7777778777777888888774
No 75
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=91.01 E-value=0.31 Score=43.43 Aligned_cols=95 Identities=16% Similarity=0.249 Sum_probs=62.0
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc-CCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecch
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG-KLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNK 138 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~-~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~ 138 (239)
+...||+.++|+++.+. +.++|-|++...++..+++.+.. .....+..+ ..+.+... ++ .+ .+.+=+++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~--KP-----~p~~~~~a~~~ 214 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKK--KP-----DPDIYNLAAET 214 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCC--CC-----CHHHHHHHHHH
Confidence 46789999999999864 99999999999999999887642 221223323 44443210 00 11 22333444
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ + .+.+++|+|+|++.-...--..|+
T Consensus 215 ~--------~--~~p~~~l~IGDs~~Di~aA~~aG~ 240 (286)
T PLN02779 215 L--------G--VDPSRCVVVEDSVIGLQAAKAAGM 240 (286)
T ss_pred h--------C--cChHHEEEEeCCHHhHHHHHHcCC
Confidence 4 2 577999999999976655555554
No 76
>PRK09449 dUMP phosphatase; Provisional
Probab=90.84 E-value=0.3 Score=41.11 Aligned_cols=86 Identities=14% Similarity=0.055 Sum_probs=56.0
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhc
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQ 141 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~ 141 (239)
+...|++.++|+.|.+.+.++|-|++....+..+++.+.-.. .|..++..+.+... ++. ...+.+=++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~--~fd~v~~~~~~~~~--KP~----p~~~~~~~~~~-- 163 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD--YFDLLVISEQVGVA--KPD----VAIFDYALEQM-- 163 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH--HcCEEEEECccCCC--CCC----HHHHHHHHHHc--
Confidence 457899999999999889999999999999988887754221 34445454444211 000 11233344444
Q ss_pred ccccCCCCCCCCCCEEEEECCch
Q 041910 142 KINTSNKYHFNESDTLLIDDNPY 164 (239)
Q Consensus 142 ~~~~~~~~~~dl~~tViIDDsp~ 164 (239)
+. .+.+++++|+|++.
T Consensus 164 ------~~-~~~~~~~~vgD~~~ 179 (224)
T PRK09449 164 ------GN-PDRSRVLMVGDNLH 179 (224)
T ss_pred ------CC-CCcccEEEEcCCcH
Confidence 21 23478999999974
No 77
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=90.70 E-value=0.42 Score=40.07 Aligned_cols=89 Identities=13% Similarity=0.108 Sum_probs=58.0
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCc-eEeecchh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPL-FFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~-~~KDL~~l 139 (239)
...+|++.+||+.+.+ .+.++|.|.+...++..+++.+.-.. .+..++..+.+.. .+.++. +.+=++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~-------~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD--YFSVVIGGDSLPN-------KKPDPAPLLLACEKL 162 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc--CccEEEcCCCCCC-------CCcChHHHHHHHHHc
Confidence 5689999999999996 48999999999999999988864321 3344444333211 011111 12222222
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccC
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLN 169 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~ 169 (239)
+.+.+++|+|+|++.-...-
T Consensus 163 ----------~~~~~~~i~igD~~~Di~~a 182 (226)
T PRK13222 163 ----------GLDPEEMLFVGDSRNDIQAA 182 (226)
T ss_pred ----------CCChhheEEECCCHHHHHHH
Confidence 25679999999997655443
No 78
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=90.60 E-value=0.33 Score=42.79 Aligned_cols=17 Identities=6% Similarity=-0.064 Sum_probs=14.3
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
.+.++++|+||||+...
T Consensus 13 ~~~li~~D~DGTLl~~~ 29 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIK 29 (266)
T ss_pred CCEEEEEecCCCCCCCC
Confidence 46889999999999754
No 79
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=90.23 E-value=0.24 Score=42.35 Aligned_cols=92 Identities=14% Similarity=0.010 Sum_probs=61.1
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC---ceEeecc
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP---LFFKDLN 137 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~---~~~KDL~ 137 (239)
+...||+.++|+.+.+. +.++|=|++...++..+++.+.-. ..+..++..+.... .|+ .+.+=++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~--~~fd~iv~s~~~~~---------~KP~p~~~~~~~~ 160 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD--AHLDLLLSTHTFGY---------PKEDQRLWQAVAE 160 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH--HHCCEEEEeeeCCC---------CCCCHHHHHHHHH
Confidence 45789999999999975 899999999999999988775321 13344443333211 121 2333344
Q ss_pred hhhcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 138 KLWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 138 ~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
++ + .+.+++|+|+|++.-...--..|+
T Consensus 161 ~~--------~--~~p~~~l~igDs~~di~aA~~aG~ 187 (224)
T PRK14988 161 HT--------G--LKAERTLFIDDSEPILDAAAQFGI 187 (224)
T ss_pred Hc--------C--CChHHEEEEcCCHHHHHHHHHcCC
Confidence 44 2 578999999999976654334433
No 80
>PRK10976 putative hydrolase; Provisional
Probab=90.17 E-value=0.42 Score=41.47 Aligned_cols=15 Identities=7% Similarity=0.089 Sum_probs=13.0
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
+++++||||||+...
T Consensus 3 kli~~DlDGTLl~~~ 17 (266)
T PRK10976 3 QVVASDLDGTLLSPD 17 (266)
T ss_pred eEEEEeCCCCCcCCC
Confidence 689999999999653
No 81
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=90.05 E-value=0.49 Score=40.85 Aligned_cols=96 Identities=10% Similarity=0.025 Sum_probs=63.1
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...||+.++|++|.+. +.++|=|++...+++.+++.+.-... .+.++++.+..... ++. ...+.+-++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~-f~d~ii~~~~~~~~--KP~----p~~~~~a~~~l- 169 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGY-RPDYNVTTDDVPAG--RPA----PWMALKNAIEL- 169 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCC-CCceEEccccCCCC--CCC----HHHHHHHHHHc-
Confidence 46789999999999865 99999999999999999988753321 12455555543211 110 11334445555
Q ss_pred cccccCCCCCC-CCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHF-NESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~-dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ . +.+++|+|.|++.-...--..|+
T Consensus 170 -------~--~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 170 -------G--VYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred -------C--CCCchheEEECCcHHHHHHHHHCCC
Confidence 2 3 37899999999976555444444
No 82
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=89.99 E-value=0.35 Score=40.86 Aligned_cols=93 Identities=15% Similarity=0.151 Sum_probs=60.6
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
....||+.++|+.+.+. +.++|-|++....++.+++.+.-.. .+..++..+..... + .++ .+.+=++.+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~~--K-----p~~~~~~~~~~~~ 161 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD--YFDALASAEKLPYS--K-----PHPEVYLNCAAKL 161 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh--cccEEEEcccCCCC--C-----CCHHHHHHHHHHc
Confidence 45779999999999865 9999999999999999988864222 34445555443210 0 011 222333333
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccCCCCC
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLNPPNT 173 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ 173 (239)
+.+.+++++|+|++.-...--..|
T Consensus 162 ----------~~~~~~~~~igDs~~Di~aA~~aG 185 (222)
T PRK10826 162 ----------GVDPLTCVALEDSFNGMIAAKAAR 185 (222)
T ss_pred ----------CCCHHHeEEEcCChhhHHHHHHcC
Confidence 257799999999997655444433
No 83
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=89.97 E-value=0.42 Score=41.74 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=13.3
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
.+++++||||||+...
T Consensus 2 ~kli~~DlDGTLl~~~ 17 (272)
T PRK15126 2 ARLAAFDMDGTLLMPD 17 (272)
T ss_pred ccEEEEeCCCcCcCCC
Confidence 3689999999999653
No 84
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=89.96 E-value=0.22 Score=40.37 Aligned_cols=86 Identities=21% Similarity=0.236 Sum_probs=54.2
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
+...||+.++|+.+.+. +.++|-|++ .+++.+++.+.-.. .+..++..+.+... ++ ++ .+.+=++++
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~--~f~~v~~~~~~~~~--kp-----~~~~~~~~~~~~ 155 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD--YFDAIVDADEVKEG--KP-----HPETFLLAAELL 155 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH--HCCEeeehhhCCCC--CC-----ChHHHHHHHHHc
Confidence 56899999999999875 888898887 77888887654221 34445554433211 00 11 122223333
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+.+.+++|+|+|++.-...
T Consensus 156 ----------~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 156 ----------GVSPNECVVFEDALAGVQA 174 (185)
T ss_pred ----------CCCHHHeEEEeCcHhhHHH
Confidence 2567999999999865543
No 85
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=89.65 E-value=0.57 Score=42.43 Aligned_cols=40 Identities=5% Similarity=-0.036 Sum_probs=28.9
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-----CcEEEEeCCCc
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-----RFEVGIWSSAK 88 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-----~fevvIwTsa~ 88 (239)
.+++|+||||+.... .-|+..++++.+.. ...+++.|...
T Consensus 2 ~~ifD~DGvL~~g~~-----------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~ 46 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK-----------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGG 46 (321)
T ss_pred EEEEeCcCceECCcc-----------------------ccHHHHHHHHHHhccccccCCCEEEEecCC
Confidence 578999999998742 24677777777775 56677777554
No 86
>PTZ00174 phosphomannomutase; Provisional
Probab=89.06 E-value=0.37 Score=41.77 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=14.3
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
+.+++++||||||++..
T Consensus 4 ~~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPR 20 (247)
T ss_pred CCeEEEEECcCCCcCCC
Confidence 35789999999999764
No 87
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=88.99 E-value=0.83 Score=35.97 Aligned_cols=80 Identities=21% Similarity=0.236 Sum_probs=53.2
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHH-hcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecch
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCA-MGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNK 138 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~i-d~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~ 138 (239)
....||+.++|+.+.+ .+.++|.|++.+..+..+++.. .. .+..+...+++. . ++ ++ .+.+=+++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~l~~----~f~~i~~~~~~~-~--Kp-----~~~~~~~~~~~ 130 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKHLGD----YFDLILGSDEFG-A--KP-----EPEIFLAALES 130 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHHHHh----cCcEEEecCCCC-C--Cc-----CHHHHHHHHHH
Confidence 3456999999999975 5899999999999999999985 32 233444544432 1 11 11 22233334
Q ss_pred hhcccccCCCCCCCCCCEEEEECCch
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPY 164 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~ 164 (239)
+ + .+. ++|+|.|++.
T Consensus 131 ~--------~--~~~-~~l~iGDs~~ 145 (154)
T TIGR01549 131 L--------G--LPP-EVLHVGDNLN 145 (154)
T ss_pred c--------C--CCC-CEEEEeCCHH
Confidence 4 2 456 8999999964
No 88
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=88.88 E-value=0.23 Score=43.07 Aligned_cols=25 Identities=8% Similarity=-0.003 Sum_probs=19.6
Q ss_pred ccccCCCCcceEEEeCCCceeEeec
Q 041910 16 DKLNLGPKKKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 16 ~~l~~~~~k~lLVLDLDeTLv~~~~ 40 (239)
+++.....-+.++|||||||+.+..
T Consensus 14 ~~~~~~~~~k~viFDlDGTLiDs~~ 38 (248)
T PLN02770 14 SSLSGLAPLEAVLFDVDGTLCDSDP 38 (248)
T ss_pred ccccccCccCEEEEcCCCccCcCHH
Confidence 3456666678899999999998763
No 89
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=88.71 E-value=0.31 Score=39.87 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=54.6
Q ss_pred EeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccC--CccccCCCCCceEeecchhh
Q 041910 63 FKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSG--FKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~--~~~~e~~~k~~~~KDL~~l~ 140 (239)
...|++.++|+.|. +.++|.|++...++..+++.+.-. ..+..++..+...... .++. ...+.+=++++
T Consensus 84 ~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~KP~----p~~~~~~~~~~- 154 (184)
T TIGR01993 84 KPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIE--DCFDGIFCFDTANPDYLLPKPS----PQAYEKALREA- 154 (184)
T ss_pred CCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcH--hhhCeEEEeecccCccCCCCCC----HHHHHHHHHHh-
Confidence 35789999999997 689999999999999999887422 1344444433321100 0000 01233334444
Q ss_pred cccccCCCCCCCCCCEEEEECCchhh
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKA 166 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~ 166 (239)
+ .+.+++++|+|++...
T Consensus 155 -------~--~~~~~~l~vgD~~~di 171 (184)
T TIGR01993 155 -------G--VDPERAIFFDDSARNI 171 (184)
T ss_pred -------C--CCccceEEEeCCHHHH
Confidence 2 5789999999998654
No 90
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=88.58 E-value=0.74 Score=38.12 Aligned_cols=82 Identities=9% Similarity=0.091 Sum_probs=54.2
Q ss_pred eCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchhhc
Q 041910 64 KRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKLWQ 141 (239)
Q Consensus 64 ~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l~~ 141 (239)
..|+..++|+.+.+. +.++|-|++.+.+++.+++.+.-.. .+..+.+.+.... ++ ++ .+.+-++.+
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~~~---KP-----~p~~~~~~~~~~-- 174 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI--LFPVQIWMEDCPP---KP-----NPEPLILAAKAL-- 174 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh--hCCEEEeecCCCC---Cc-----CHHHHHHHHHHh--
Confidence 344569999999865 9999999999999999998875322 3445555444321 11 11 223334443
Q ss_pred ccccCCCCCCCCCCEEEEECCchh
Q 041910 142 KINTSNKYHFNESDTLLIDDNPYK 165 (239)
Q Consensus 142 ~~~~~~~~~~dl~~tViIDDsp~~ 165 (239)
+ .+.+++|+|.|++.-
T Consensus 175 ------~--~~~~~~i~vGD~~~D 190 (197)
T TIGR01548 175 ------G--VEACHAAMVGDTVDD 190 (197)
T ss_pred ------C--cCcccEEEEeCCHHH
Confidence 2 567899999999853
No 91
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=88.46 E-value=1.4 Score=36.47 Aligned_cols=66 Identities=15% Similarity=0.077 Sum_probs=40.0
Q ss_pred CCcceEEEeCCCceeEee-ccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHH-hCcEEEEeCCCccccHHHHHHHH
Q 041910 22 PKKKLLVLSPSRLLVHRA-HRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCF-ERFEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~-~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~-~~fevvIwTsa~~~ya~~il~~i 99 (239)
+..+++|+|+||||+... ..... +.....+.+ |.+ .=++.+. +.+.++|=|......+..+++.+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~---------~~~~~~~~~--~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNN---------GEELKAFNV--RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCC---------CCEEEEEec--cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 357899999999999652 11100 000011111 221 1233333 46899999999999999988887
Q ss_pred h
Q 041910 100 M 100 (239)
Q Consensus 100 d 100 (239)
.
T Consensus 86 g 86 (183)
T PRK09484 86 G 86 (183)
T ss_pred C
Confidence 4
No 92
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=88.33 E-value=0.74 Score=38.61 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=57.8
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
....||+.++|+++.+ .+.++|-|++...++..+++.+.-.....+..+...+.-.. + ++ ++ .+.+=++++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~-~-KP-----~p~~~~~a~~~~ 158 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA-G-RP-----APDLILRAMELT 158 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC-C-CC-----CHHHHHHHHHHc
Confidence 4688999999999975 59999999999999999999875331123444444333110 0 00 11 222333443
Q ss_pred hcccccCCCCCCC-CCCEEEEECCchhhcc
Q 041910 140 WQKINTSNKYHFN-ESDTLLIDDNPYKALL 168 (239)
Q Consensus 140 ~~~~~~~~~~~~d-l~~tViIDDsp~~~~~ 168 (239)
+ .. .+++|+|+|++.-...
T Consensus 159 --------~--~~~~~~~~~igD~~~Di~a 178 (220)
T TIGR03351 159 --------G--VQDVQSVAVAGDTPNDLEA 178 (220)
T ss_pred --------C--CCChhHeEEeCCCHHHHHH
Confidence 2 33 5899999999865433
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=88.31 E-value=0.53 Score=42.11 Aligned_cols=40 Identities=23% Similarity=0.137 Sum_probs=36.6
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
.+..|||+.+|++.|.++ ..++|+|+|...+++.+++.+.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lg 159 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAG 159 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcC
Confidence 578999999999999866 9999999999999999999854
No 94
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=88.28 E-value=1.6 Score=37.93 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=26.2
Q ss_pred ceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCC
Q 041910 25 KLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSS 86 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTs 86 (239)
.++++|+||||+.... .=|+..++|+.+.+. ..+++-|.
T Consensus 2 ~~~~~D~DGtl~~~~~-----------------------~i~~a~~~l~~l~~~g~~~~~~Tn 41 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE-----------------------RIPEAETFVHELQKRDIPYLFVTN 41 (249)
T ss_pred CEEEEeCCCceEcCCe-----------------------eCcCHHHHHHHHHHCCCeEEEEeC
Confidence 4789999999986531 124567777777754 56666664
No 95
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=87.87 E-value=0.3 Score=42.24 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=32.2
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCcc-ccHHHHHHHH
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKE-RNVDTVLYCA 99 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~-~ya~~il~~i 99 (239)
+.+++.||||||+...... ....|.+.+.++.+.+.--..|+.+|.. .-+..+++.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~-------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~ 58 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD-------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQK 58 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC-------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcC
Confidence 4688899999999632100 0133666666666666554445555444 3344444433
No 96
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=87.85 E-value=0.36 Score=40.29 Aligned_cols=94 Identities=12% Similarity=0.007 Sum_probs=52.9
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHH--HHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecch
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVD--TVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNK 138 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~--~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~ 138 (239)
+...|++.++|+.|.+. +.++|-|++...+.. ..+.... ....+..++..+.+... ++. ...+.+-+++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~--l~~~fd~v~~s~~~~~~--KP~----p~~~~~~~~~ 164 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGD--IMALFDAVVESCLEGLR--KPD----PRIYQLMLER 164 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhh--hHhhCCEEEEeeecCCC--CCC----HHHHHHHHHH
Confidence 45789999999999864 999999998765522 2221111 11133444432222110 100 0123344444
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhccCCCCC
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNT 173 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ 173 (239)
+ | .+.+++|+|||++.....--..|
T Consensus 165 ~--------g--~~~~~~l~i~D~~~di~aA~~aG 189 (211)
T TIGR02247 165 L--------G--VAPEECVFLDDLGSNLKPAAALG 189 (211)
T ss_pred c--------C--CCHHHeEEEcCCHHHHHHHHHcC
Confidence 4 2 57899999999987664433333
No 97
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=87.75 E-value=0.57 Score=41.14 Aligned_cols=77 Identities=17% Similarity=0.143 Sum_probs=42.4
Q ss_pred CCcceEEEeCCCceeEeeccC-----CCCCC-CCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCc-ccc-HH
Q 041910 22 PKKKLLVLSPSRLLVHRAHRA-----NKATI-PQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAK-ERN-VD 93 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~-----~~~~~-~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~-~~y-a~ 93 (239)
.+++.+|||||||.+..+.-. ++..+ |.. =+.-+..-.-..=||.-|||+++-++--.|.|-|-. .+. .+
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~--Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPET--WDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCccc--hHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccc
Confidence 356699999999999765211 11101 100 000001112245599999999999986666555543 344 34
Q ss_pred HHHHHHh
Q 041910 94 TVLYCAM 100 (239)
Q Consensus 94 ~il~~id 100 (239)
.-++-+-
T Consensus 155 ~T~~nLk 161 (274)
T COG2503 155 GTIENLK 161 (274)
T ss_pred hhHHHHH
Confidence 4444443
No 98
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=87.58 E-value=0.75 Score=40.00 Aligned_cols=81 Identities=11% Similarity=-0.014 Sum_probs=47.9
Q ss_pred CCCcceEEEeCCCceeEeec--cCCC-CCCCCCC-CCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAH--RANK-ATIPQNR-MPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTV 95 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~--~~~~-~~~~~~~-~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~i 95 (239)
..+|..+|||+|||++.... .... ...+.+. ..+.-+..-.--.-|+..+|++.+.+. +.|++-|.-.+...+..
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 35789999999999997652 1000 0000000 000000001124678899999999865 88888888877765555
Q ss_pred HHHHhc
Q 041910 96 LYCAMG 101 (239)
Q Consensus 96 l~~id~ 101 (239)
++.|..
T Consensus 154 ~~nL~~ 159 (229)
T TIGR01675 154 LDNLIN 159 (229)
T ss_pred HHHHHH
Confidence 566653
No 99
>PLN02423 phosphomannomutase
Probab=87.52 E-value=0.78 Score=39.89 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=31.3
Q ss_pred cceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHh
Q 041910 24 KKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id 100 (239)
+.++++||||||+..... .-|...+-++.+.+...++|-|.. .| ..+.+.+.
T Consensus 7 ~~i~~~D~DGTLl~~~~~----------------------i~~~~~~ai~~l~~~i~fviaTGR--~~-~~~~~~~~ 58 (245)
T PLN02423 7 GVIALFDVDGTLTAPRKE----------------------ATPEMLEFMKELRKVVTVGVVGGS--DL-SKISEQLG 58 (245)
T ss_pred ceEEEEeccCCCcCCCCc----------------------CCHHHHHHHHHHHhCCEEEEECCc--CH-HHHHHHhc
Confidence 345559999999965321 234556778888877555555543 22 34444444
No 100
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=87.40 E-value=0.73 Score=40.97 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=45.1
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcE--EEEeCCCccccHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFE--VGIWSSAKERNVDTVLY 97 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fe--vvIwTsa~~~ya~~il~ 97 (239)
..++.+++||.||||..-...+ .-+..=+.+.+.|+.|+..+. |+|-|--+..-.+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p-----------------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHP-----------------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccceEEEEeccccccccccCc-----------------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 4588999999999999876432 123455778899999999887 77777777766666555
No 101
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=87.39 E-value=0.87 Score=40.16 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=59.9
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceE-eecchh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFF-KDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~-KDL~~l 139 (239)
...+|++.++|+.+.+ .+.++|-|++...++..+++.+.-.. .+..+.+.+.+.. .+.++..+ +=++++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~--~f~~i~~~d~~~~-------~Kp~p~~~~~~~~~~ 170 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR--YFRWIIGGDTLPQ-------KKPDPAALLFVMKMA 170 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh--hCeEEEecCCCCC-------CCCCcHHHHHHHHHh
Confidence 4578999999999986 59999999999999998888754221 2334444443221 01111112 222222
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+.+.+++|+|+|++.-...--.+++
T Consensus 171 ----------g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 171 ----------GVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred ----------CCChhHEEEECCCHHHHHHHHHCCC
Confidence 2578999999999876655444443
No 102
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=87.36 E-value=0.79 Score=38.79 Aligned_cols=38 Identities=18% Similarity=0.097 Sum_probs=35.4
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
+..+||+.+||+++.+. +.++|-|++...+++++++.+
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 57899999999999865 999999999999999999987
No 103
>PLN02940 riboflavin kinase
Probab=87.03 E-value=0.59 Score=43.48 Aligned_cols=96 Identities=16% Similarity=0.282 Sum_probs=62.8
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...||+.++|+.|.+. +.++|=|++.+.++..+++...+ ....+.++.+.+++... ++. ...+.+-++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~g-l~~~Fd~ii~~d~v~~~--KP~----p~~~~~a~~~l- 163 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQG-WKESFSVIVGGDEVEKG--KPS----PDIFLEAAKRL- 163 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccC-hHhhCCEEEehhhcCCC--CCC----HHHHHHHHHHc-
Confidence 35689999999999866 89999999999999887763221 11245566676665321 110 01333444454
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ ...+++|+|+|++.-...--..|+
T Consensus 164 -------g--v~p~~~l~VGDs~~Di~aA~~aGi 188 (382)
T PLN02940 164 -------N--VEPSNCLVIEDSLPGVMAGKAAGM 188 (382)
T ss_pred -------C--CChhHEEEEeCCHHHHHHHHHcCC
Confidence 2 567999999999976644434343
No 104
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=87.03 E-value=0.87 Score=38.18 Aligned_cols=13 Identities=8% Similarity=0.005 Sum_probs=10.8
Q ss_pred EEEeCCCceeEee
Q 041910 27 LVLSPSRLLVHRA 39 (239)
Q Consensus 27 LVLDLDeTLv~~~ 39 (239)
+++||||||+...
T Consensus 1 i~~DlDGTLl~~~ 13 (225)
T TIGR01482 1 IASDIDGTLTDPN 13 (225)
T ss_pred CeEeccCccCCCC
Confidence 5799999999653
No 105
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=86.97 E-value=0.95 Score=37.91 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=35.0
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
+..+|++.+||+.+.+. +.++|-|++...++..+++.+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~ 123 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLG 123 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC
Confidence 45799999999999975 9999999999999999998864
No 106
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=86.82 E-value=1.5 Score=37.11 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=39.1
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCC
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKL 103 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~ 103 (239)
-+..|||..+|.+++.++ -.++|-|||+..|+.++++.|-+..
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke 114 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE 114 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence 378999999999999987 8899999999999999999998653
No 107
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.77 E-value=0.38 Score=39.80 Aligned_cols=89 Identities=11% Similarity=-0.046 Sum_probs=49.6
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHH--hcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecch
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCA--MGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNK 138 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~i--d~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~ 138 (239)
+...||+.++|+.|.+.+.+++-|++.......+++.+ ..-....+..+.+.+.+. .|+ .+.+=+++
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~----------~kp~~~~~a~~~ 142 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE----------SKEKLFIKAKEK 142 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc----------ccHHHHHHHHHH
Confidence 45799999999999987776665655444433344443 211111233333333321 021 12222333
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhccCCCC
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALLNPPN 172 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N 172 (239)
+ + .+.+|+|||++.....--..
T Consensus 143 ~--------~----~~~~v~vgDs~~di~aA~~a 164 (197)
T PHA02597 143 Y--------G----DRVVCFVDDLAHNLDAAHEA 164 (197)
T ss_pred h--------C----CCcEEEeCCCHHHHHHHHHH
Confidence 3 2 57799999999987655454
No 108
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=86.75 E-value=1.7 Score=37.97 Aligned_cols=96 Identities=13% Similarity=0.048 Sum_probs=61.3
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...||+.++|+.|.+. +.++|=|++.+..+..+++.+.-... .+..+++.++.... ++. ...+.+-++++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~-~~d~i~~~~~~~~~--KP~----p~~~~~a~~~l- 171 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGY-RPDHVVTTDDVPAG--RPY----PWMALKNAIEL- 171 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCC-CceEEEcCCcCCCC--CCC----hHHHHHHHHHc-
Confidence 45689999999999865 99999999999999999887642221 12445555543211 110 01334445555
Q ss_pred cccccCCCCCC-CCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHF-NESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~-dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ . +.+++|+|.|++.-...--..|+
T Consensus 172 -------~--~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 172 -------G--VYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred -------C--CCCCcceEEEcCcHHHHHHHHHCCC
Confidence 2 3 35889999999976554444443
No 109
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=86.55 E-value=0.54 Score=39.09 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=55.3
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
...+|++.++|+.+.+ .+.++|-|++....+..++....+ ....+..+++-+.+... ++ ++ .|.+=++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~-l~~~fd~v~~s~~~~~~--KP-----~p~~~~~~~~~~ 154 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPE-VRAAADHIYLSQDLGMR--KP-----EARIYQHVLQAE 154 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchh-HHHhcCEEEEecccCCC--CC-----CHHHHHHHHHHc
Confidence 4578999999999986 599999999987766654433111 11134445444444321 11 11 233444444
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+ .+.+++|+|||++.....
T Consensus 155 --------~--~~p~~~l~vgD~~~di~a 173 (199)
T PRK09456 155 --------G--FSAADAVFFDDNADNIEA 173 (199)
T ss_pred --------C--CChhHeEEeCCCHHHHHH
Confidence 2 578999999999977544
No 110
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=86.55 E-value=1.1 Score=42.47 Aligned_cols=91 Identities=13% Similarity=0.054 Sum_probs=60.3
Q ss_pred EEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCc-eEeecchh
Q 041910 62 VFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPL-FFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~-~~KDL~~l 139 (239)
+..+||+.++|+++.+ .+.++|-|++...++..+++.+.-.. .+..+++.+.... +.|+. +.+-+++
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~--~f~~i~~~d~v~~--------~~kP~~~~~al~~- 397 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ--WVTETFSIEQINS--------LNKSDLVKSILNK- 397 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh--hcceeEecCCCCC--------CCCcHHHHHHHHh-
Confidence 4568999999999986 49999999999999999999865322 3444555444311 01222 2222222
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
.+.+++|+|.|++.-...--..|+
T Consensus 398 -----------l~~~~~v~VGDs~~Di~aAk~AG~ 421 (459)
T PRK06698 398 -----------YDIKEAAVVGDRLSDINAAKDNGL 421 (459)
T ss_pred -----------cCcceEEEEeCCHHHHHHHHHCCC
Confidence 346889999999976655444443
No 111
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=86.37 E-value=1.4 Score=37.96 Aligned_cols=45 Identities=9% Similarity=0.054 Sum_probs=30.9
Q ss_pred EEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHH
Q 041910 27 LVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDT 94 (239)
Q Consensus 27 LVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~ 94 (239)
++||+||||+.... .=|+..++++.+.+. +.+.+-|.++.+-...
T Consensus 1 ~lfD~DGvL~~~~~-----------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~ 46 (236)
T TIGR01460 1 FLFDIDGVLWLGHK-----------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEED 46 (236)
T ss_pred CEEeCcCccCcCCc-----------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHH
Confidence 47999999998742 135778888888765 7777777555433333
No 112
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=86.07 E-value=0.54 Score=38.32 Aligned_cols=89 Identities=10% Similarity=0.147 Sum_probs=57.9
Q ss_pred eCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchhhcc
Q 041910 64 KRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKLWQK 142 (239)
Q Consensus 64 ~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l~~~ 142 (239)
.-|+ .+.|+.+.+.+.++|=|++.+.+++.+++.+.-. ..+..+.+.+++... ++ ++ .+.+-++++
T Consensus 89 ~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~--~~fd~i~~~~~~~~~--KP-----~p~~~~~~~~~~--- 155 (188)
T PRK10725 89 PLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLR--RYFDAVVAADDVQHH--KP-----APDTFLRCAQLM--- 155 (188)
T ss_pred CccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcH--hHceEEEehhhccCC--CC-----ChHHHHHHHHHc---
Confidence 4465 4788888877899999999999999999986532 245566666654321 10 11 223333444
Q ss_pred cccCCCCCCCCCCEEEEECCchhhccCCCC
Q 041910 143 INTSNKYHFNESDTLLIDDNPYKALLNPPN 172 (239)
Q Consensus 143 ~~~~~~~~~dl~~tViIDDsp~~~~~~p~N 172 (239)
+ .+.+++|+|+|++.-+..--..
T Consensus 156 -----~--~~~~~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 156 -----G--VQPTQCVVFEDADFGIQAARAA 178 (188)
T ss_pred -----C--CCHHHeEEEeccHhhHHHHHHC
Confidence 2 4678999999997766543333
No 113
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=85.82 E-value=0.58 Score=40.00 Aligned_cols=90 Identities=13% Similarity=0.149 Sum_probs=66.1
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchh
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKL 139 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l 139 (239)
.+...||+.+||+.|... .-+++=|++.+..+..+++.+.-.. .+..+.++++.... ++. --.|.+-.++|
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~--~f~~~v~~~dv~~~--KP~----Pd~yL~Aa~~L 155 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD--YFDVIVTADDVARG--KPA----PDIYLLAAERL 155 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh--hcchhccHHHHhcC--CCC----CHHHHHHHHHc
Confidence 357899999999999987 8999999999999999988876432 34444455655432 111 12667788887
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
| .+.+++|.|+||+.-...
T Consensus 156 --------g--v~P~~CvviEDs~~Gi~A 174 (221)
T COG0637 156 --------G--VDPEECVVVEDSPAGIQA 174 (221)
T ss_pred --------C--CChHHeEEEecchhHHHH
Confidence 4 789999999999876543
No 114
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=85.80 E-value=0.43 Score=38.93 Aligned_cols=18 Identities=6% Similarity=0.093 Sum_probs=14.8
Q ss_pred CcceEEEeCCCceeEeec
Q 041910 23 KKKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~ 40 (239)
+-+.+++|+||||+.+..
T Consensus 4 ~~~~viFD~DGTLiDs~~ 21 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEP 21 (188)
T ss_pred cceEEEEcCCCcCccCHH
Confidence 356789999999999853
No 115
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=85.73 E-value=1 Score=39.97 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=57.7
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...|++.++|++|.+. +.++|-|++...++..+++.+.-.. .+..+.+.+.. ..++ .-+..+-
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~--~F~~vi~~~~~----------~~k~---~~~~~~l 205 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS--LFSVVQAGTPI----------LSKR---RALSQLV 205 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh--heEEEEecCCC----------CCCH---HHHHHHH
Confidence 34579999999999865 8999999999999999998875322 34444322211 0011 1122221
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
++. +.+.+++|+|+|++.-...--..|+
T Consensus 206 ~~~------~~~p~~~l~IGDs~~Di~aA~~AG~ 233 (273)
T PRK13225 206 ARE------GWQPAAVMYVGDETRDVEAARQVGL 233 (273)
T ss_pred HHh------CcChhHEEEECCCHHHHHHHHHCCC
Confidence 211 2467899999999865544333333
No 116
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=85.01 E-value=0.5 Score=39.16 Aligned_cols=15 Identities=20% Similarity=0.295 Sum_probs=12.9
Q ss_pred eEEEeCCCceeEeec
Q 041910 26 LLVLSPSRLLVHRAH 40 (239)
Q Consensus 26 lLVLDLDeTLv~~~~ 40 (239)
.+++||||||+.+..
T Consensus 2 ~viFD~DGTLiDs~~ 16 (197)
T TIGR01548 2 ALVLDMDGVMADVSQ 16 (197)
T ss_pred ceEEecCceEEechH
Confidence 479999999998863
No 117
>PRK11587 putative phosphatase; Provisional
Probab=84.89 E-value=0.45 Score=40.15 Aligned_cols=16 Identities=19% Similarity=0.098 Sum_probs=13.9
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
.+.+++||||||+.+.
T Consensus 3 ~k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 3 CKGFLFDLDGTLVDSL 18 (218)
T ss_pred CCEEEEcCCCCcCcCH
Confidence 3679999999999986
No 118
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=84.80 E-value=1.2 Score=36.79 Aligned_cols=83 Identities=20% Similarity=0.164 Sum_probs=50.8
Q ss_pred EeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhc
Q 041910 63 FKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQ 141 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~ 141 (239)
...|++.++|+++.+. +.++|-|++... +..+++.+.-. ..+..++..+.+... ++. ...+.+=++.+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~--~~fd~i~~s~~~~~~--KP~----~~~~~~~~~~~-- 173 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL--EYFDFVVTSYEVGAE--KPD----PKIFQEALERA-- 173 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH--HhcceEEeecccCCC--CCC----HHHHHHHHHHc--
Confidence 5679999999999975 899999987764 45666654321 234445443333210 000 01223334444
Q ss_pred ccccCCCCCCCCCCEEEEECCch
Q 041910 142 KINTSNKYHFNESDTLLIDDNPY 164 (239)
Q Consensus 142 ~~~~~~~~~~dl~~tViIDDsp~ 164 (239)
+.+.+++|+|+|++.
T Consensus 174 --------~~~~~~~~~IgD~~~ 188 (203)
T TIGR02252 174 --------GISPEEALHIGDSLR 188 (203)
T ss_pred --------CCChhHEEEECCCch
Confidence 267899999999974
No 119
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=84.70 E-value=0.6 Score=40.38 Aligned_cols=42 Identities=7% Similarity=-0.007 Sum_probs=28.0
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEE
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEV 81 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fev 81 (239)
++.+|+||+||||+.-...+. ....=|.+.+.|+.|++....
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~-----------------~~~~~~~~~~~L~~L~~~~~~ 43 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD-----------------AAVVSDRLLTILQKLAARPHN 43 (244)
T ss_pred CcEEEEEecCccccCCcCCCc-----------------ccCCCHHHHHHHHHHHhCCCC
Confidence 678899999999996432221 112346777888888876543
No 120
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=84.63 E-value=1.2 Score=38.27 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=57.1
Q ss_pred EEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHh-cCCCCcEEEEeeCCcccccCCccccCCCCCceEeecch
Q 041910 61 LVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAM-GKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNK 138 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id-~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~ 138 (239)
.....|++.++|+.+.+ .+.++|.|+++......+++... ++-...+...+. +. .|.++. ...|.+=++.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd---~~-~g~KP~----p~~y~~i~~~ 164 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFD---TT-VGLKTE----AQSYVKIAGQ 164 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEE---eC-cccCCC----HHHHHHHHHH
Confidence 34578999999999986 58999999999988888877653 121122333332 11 121111 1133344445
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+ + .+.+++++|+|++.-...
T Consensus 165 l--------g--v~p~e~lfVgDs~~Di~A 184 (220)
T TIGR01691 165 L--------G--SPPREILFLSDIINELDA 184 (220)
T ss_pred h--------C--cChhHEEEEeCCHHHHHH
Confidence 4 2 568999999999865443
No 121
>PRK11590 hypothetical protein; Provisional
Probab=84.40 E-value=0.56 Score=39.59 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=33.3
Q ss_pred EEeCCChHHHH-HHHHh-CcEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFM-KFCFE-RFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL-~~l~~-~fevvIwTsa~~~ya~~il~~id 100 (239)
+..+|++.+.| +.+.+ .+.++|=|++...+++++++.+-
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 35589999999 56774 79999999999999999998854
No 122
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=84.32 E-value=1.5 Score=36.30 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=33.6
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCc---EEEEeCCCc
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERF---EVGIWSSAK 88 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~f---evvIwTsa~ 88 (239)
+=+.||+|+|+||+..... ..-|-+.+.++.|.+.| .|.|.|.+.
T Consensus 40 Gik~li~DkDNTL~~~~~~---------------------~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 40 GIKALIFDKDNTLTPPYED---------------------EIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred CceEEEEcCCCCCCCCCcC---------------------cCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 5678999999999855321 24567788889998765 389998874
No 123
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=84.28 E-value=1.5 Score=37.00 Aligned_cols=41 Identities=17% Similarity=0.067 Sum_probs=37.0
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
.+..|||+.+||+++.+. ..++|-|++...+++++++.+.+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCC
Confidence 468999999999999985 99999999999999999998743
No 124
>PLN02151 trehalose-phosphatase
Probab=84.27 E-value=1.1 Score=41.36 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=42.5
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLY 97 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~ 97 (239)
++.+|+||+||||+--...+ -.+..-|.+.+-|+.|++.+.++|=|--...-++.++.
T Consensus 97 ~~~ll~lDyDGTL~PIv~~P-----------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 97 KQIVMFLDYDGTLSPIVDDP-----------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CceEEEEecCccCCCCCCCc-----------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 67888899999999433221 12345688899999999888888888877776666553
No 125
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=83.61 E-value=0.63 Score=40.95 Aligned_cols=20 Identities=25% Similarity=0.132 Sum_probs=16.8
Q ss_pred CCCCcceEEEeCCCceeEee
Q 041910 20 LGPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 20 ~~~~k~lLVLDLDeTLv~~~ 39 (239)
+++.-+.+||||||||+.+.
T Consensus 20 ~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred hcCCceEEEEeCCCceeCCc
Confidence 35667889999999999884
No 126
>PLN02887 hydrolase family protein
Probab=83.57 E-value=1.6 Score=43.03 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=36.6
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
.++-+++++||||||+..... .-|.-.+-|+.+.+. ..++|=|.-....+..+++.+
T Consensus 305 ~~~iKLIa~DLDGTLLn~d~~----------------------Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNSKSQ----------------------ISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred ccCccEEEEeCCCCCCCCCCc----------------------cCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 346789999999999965321 122234556666654 666666665556666666666
Q ss_pred h
Q 041910 100 M 100 (239)
Q Consensus 100 d 100 (239)
.
T Consensus 363 ~ 363 (580)
T PLN02887 363 D 363 (580)
T ss_pred C
Confidence 4
No 127
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=83.48 E-value=0.64 Score=38.98 Aligned_cols=16 Identities=25% Similarity=0.239 Sum_probs=13.7
Q ss_pred ceEEEeCCCceeEeec
Q 041910 25 KLLVLSPSRLLVHRAH 40 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~ 40 (239)
+++++|+||||+.+..
T Consensus 2 k~iiFD~DGTL~ds~~ 17 (220)
T TIGR03351 2 SLVVLDMAGTTVDEDG 17 (220)
T ss_pred cEEEEecCCCeeccCc
Confidence 5789999999998763
No 128
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=83.33 E-value=0.75 Score=38.07 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=13.0
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
+.+++||||||+.+.
T Consensus 1 k~viFDlDGTL~d~~ 15 (203)
T TIGR02252 1 KLITFDAVGTLLALK 15 (203)
T ss_pred CeEEEecCCceeeeC
Confidence 468999999999875
No 129
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.24 E-value=1.6 Score=36.04 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=13.5
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
.+.+++||||||++..
T Consensus 2 ~k~viFDlDGTLiD~~ 17 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ 17 (197)
T ss_pred CcEEEEecCCceEchh
Confidence 3679999999999854
No 130
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.07 E-value=1.6 Score=36.55 Aligned_cols=94 Identities=18% Similarity=0.181 Sum_probs=62.7
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhc
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQ 141 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~ 141 (239)
+...|.+.++|+.+...|.++|.|.+....+...+..+- -...|..++.-+..... ++. ...|-.=++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~g--l~~~Fd~v~~s~~~g~~--KP~----~~~f~~~~~~~-- 167 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLG--LLDYFDAVFISEDVGVA--KPD----PEIFEYALEKL-- 167 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcC--ChhhhheEEEecccccC--CCC----cHHHHHHHHHc--
Confidence 567889999999999889999999998888988888764 11245555555544211 000 11233334444
Q ss_pred ccccCCCCCCCCCCEEEEECCchhhccCCCCC
Q 041910 142 KINTSNKYHFNESDTLLIDDNPYKALLNPPNT 173 (239)
Q Consensus 142 ~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ 173 (239)
| .+.+++++|||+..+-..-..+.
T Consensus 168 ------g--~~p~~~l~VgD~~~~di~gA~~~ 191 (229)
T COG1011 168 ------G--VPPEEALFVGDSLENDILGARAL 191 (229)
T ss_pred ------C--CCcceEEEECCChhhhhHHHHhc
Confidence 2 46899999999999884444443
No 131
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=82.85 E-value=0.67 Score=38.97 Aligned_cols=92 Identities=11% Similarity=0.050 Sum_probs=56.5
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEE-EEeeCCcccccCCccccCCCCCceEeecchhh
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLL-FVWDQEECTDSGFKSLEKKDKPLFFKDLNKLW 140 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~-~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~ 140 (239)
+...|++.++|+.+. +.++|-|++.+.+++.+++...-.. .+. .+.+.++... .++. ...+.+=++++
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~--~F~~~v~~~~~~~~--~KP~----p~~~~~a~~~~- 155 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH--YFPDKLFSGYDIQR--WKPD----PALMFHAAEAM- 155 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH--hCcceEeeHHhcCC--CCCC----hHHHHHHHHHc-
Confidence 456799999999994 8999999999999999887654221 221 2333333211 0000 01233444444
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhccCCCCC
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKALLNPPNT 173 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ 173 (239)
+ ...+++|+|+|++.-...--..|
T Consensus 156 -------~--~~p~~~l~igDs~~di~aA~~aG 179 (221)
T PRK10563 156 -------N--VNVENCILVDDSSAGAQSGIAAG 179 (221)
T ss_pred -------C--CCHHHeEEEeCcHhhHHHHHHCC
Confidence 2 46789999999997654433333
No 132
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=82.83 E-value=2.5 Score=35.09 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=71.1
Q ss_pred ccccccccccCCCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCc
Q 041910 10 ILELSIDKLNLGPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAK 88 (239)
Q Consensus 10 ~~~~~~~~l~~~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~ 88 (239)
+.+...+.|.. .+-+-+|+|||+|||--... ..=|-+.+-+..+.+. ..++|.|..+
T Consensus 15 v~~i~~~~L~~-~Gikgvi~DlDNTLv~wd~~---------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~ 72 (175)
T COG2179 15 VFDITPDILKA-HGIKGVILDLDNTLVPWDNP---------------------DATPELRAWLAELKEAGIKVVVVSNNK 72 (175)
T ss_pred HhhCCHHHHHH-cCCcEEEEeccCceecccCC---------------------CCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 33444444333 36788999999999965321 1235677888888876 8999999999
Q ss_pred cccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 89 ERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 89 ~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+.-+..++..++-.+ + ++-. ++ . ...+-|-|... +.+.++||||=|+-..=.+
T Consensus 73 e~RV~~~~~~l~v~f------i-~~A~------KP--~--~~~fr~Al~~m----------~l~~~~vvmVGDqL~TDVl 125 (175)
T COG2179 73 ESRVARAAEKLGVPF------I-YRAK------KP--F--GRAFRRALKEM----------NLPPEEVVMVGDQLFTDVL 125 (175)
T ss_pred HHHHHhhhhhcCCce------e-eccc------Cc--c--HHHHHHHHHHc----------CCChhHEEEEcchhhhhhh
Confidence 988888888877432 2 1110 00 0 01223445555 2688999999998766544
No 133
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=82.57 E-value=0.59 Score=38.16 Aligned_cols=14 Identities=7% Similarity=0.107 Sum_probs=12.2
Q ss_pred eEEEeCCCceeEee
Q 041910 26 LLVLSPSRLLVHRA 39 (239)
Q Consensus 26 lLVLDLDeTLv~~~ 39 (239)
++++||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 57999999999775
No 134
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=82.29 E-value=2.1 Score=42.90 Aligned_cols=58 Identities=12% Similarity=0.066 Sum_probs=40.4
Q ss_pred CCCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 21 GPKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
..+++++++||||||+..... +.. ...+-|+.+.+. ..++|=|.-+...+..+++.+
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~~--------------------i~~--~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L 470 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLTY--------------------SYS--TALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL 470 (694)
T ss_pred CceeeEEEEECcCCCcCCCCc--------------------cCH--HHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 457889999999999976421 111 234556667655 778888887777777777776
Q ss_pred h
Q 041910 100 M 100 (239)
Q Consensus 100 d 100 (239)
.
T Consensus 471 g 471 (694)
T PRK14502 471 G 471 (694)
T ss_pred C
Confidence 5
No 135
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=82.28 E-value=0.69 Score=38.75 Aligned_cols=17 Identities=6% Similarity=0.151 Sum_probs=14.4
Q ss_pred cceEEEeCCCceeEeec
Q 041910 24 KKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~ 40 (239)
.+.+++|+||||+++..
T Consensus 3 ~~~viFD~DGTL~ds~~ 19 (214)
T PRK13288 3 INTVLFDLDGTLINTNE 19 (214)
T ss_pred ccEEEEeCCCcCccCHH
Confidence 46889999999998863
No 136
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=82.10 E-value=0.63 Score=37.69 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=13.8
Q ss_pred ceEEEeCCCceeEeec
Q 041910 25 KLLVLSPSRLLVHRAH 40 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~ 40 (239)
+++++|+||||+.+..
T Consensus 2 ~~iiFD~DGTL~ds~~ 17 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAP 17 (185)
T ss_pred CeEEEcCCCcccCChH
Confidence 5789999999998863
No 137
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=81.73 E-value=0.69 Score=39.48 Aligned_cols=17 Identities=12% Similarity=0.159 Sum_probs=14.7
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
-.+.+|+|+||||+.+.
T Consensus 11 ~~k~viFD~DGTL~Ds~ 27 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSA 27 (229)
T ss_pred cCCEEEEcCcCccccCH
Confidence 45689999999999986
No 138
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=81.61 E-value=0.7 Score=38.65 Aligned_cols=16 Identities=13% Similarity=0.231 Sum_probs=13.6
Q ss_pred ceEEEeCCCceeEeec
Q 041910 25 KLLVLSPSRLLVHRAH 40 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~ 40 (239)
+.+++||||||+.+..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 5789999999998763
No 139
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=81.45 E-value=4.1 Score=36.30 Aligned_cols=57 Identities=12% Similarity=0.010 Sum_probs=42.6
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
.+.....+||||||++-.. .=|+..+||+.+.+. -.+++-|.+..+-.+.+.++|.
T Consensus 6 ~~y~~~l~DlDGvl~~G~~-----------------------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~ 62 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNE-----------------------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLS 62 (269)
T ss_pred hhcCEEEEcCcCceEeCCc-----------------------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 3456688999999996532 348889999999876 7788888887777766666655
Q ss_pred c
Q 041910 101 G 101 (239)
Q Consensus 101 ~ 101 (239)
.
T Consensus 63 ~ 63 (269)
T COG0647 63 S 63 (269)
T ss_pred h
Confidence 3
No 140
>PLN02580 trehalose-phosphatase
Probab=80.92 E-value=1.8 Score=40.50 Aligned_cols=58 Identities=17% Similarity=0.092 Sum_probs=44.9
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLY 97 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~ 97 (239)
++.+|.||.||||.--...+. .+..=|.+.+-|+.|++.+.|+|=|--...-++.++.
T Consensus 118 k~~~LfLDyDGTLaPIv~~Pd-----------------~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~ 175 (384)
T PLN02580 118 KKIALFLDYDGTLSPIVDDPD-----------------RALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVG 175 (384)
T ss_pred CCeEEEEecCCccCCCCCCcc-----------------cccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhC
Confidence 678888999999985432221 2345588999999999999999999988777777664
No 141
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=80.68 E-value=0.7 Score=40.99 Aligned_cols=17 Identities=12% Similarity=0.149 Sum_probs=15.0
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
.-+.+++||||||+.+.
T Consensus 61 ~~k~vIFDlDGTLiDS~ 77 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSL 77 (273)
T ss_pred hcCEEEECCcCccccCH
Confidence 56789999999999986
No 142
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=80.29 E-value=0.98 Score=39.83 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=15.2
Q ss_pred CCcceEEEeCCCceeEee
Q 041910 22 PKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~ 39 (239)
+=.+++++||||||+++.
T Consensus 11 ~~~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSV 28 (272)
T ss_pred ccCCEEEEcCCCccccCH
Confidence 346699999999999985
No 143
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=80.20 E-value=0.91 Score=39.63 Aligned_cols=16 Identities=6% Similarity=-0.014 Sum_probs=13.8
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
-++++||+||||+.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 4689999999999974
No 144
>PLN03017 trehalose-phosphatase
Probab=80.04 E-value=2.2 Score=39.65 Aligned_cols=58 Identities=14% Similarity=0.071 Sum_probs=40.7
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHH
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVL 96 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il 96 (239)
.++.+|+||+||||+--...+. ....=|.+.+-|+.+.+.+.++|=|--...-+..++
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~-----------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPD-----------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcc-----------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhh
Confidence 3678888999999993322111 112346777889999988888888887777776664
No 145
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=79.80 E-value=2.6 Score=33.74 Aligned_cols=39 Identities=23% Similarity=0.149 Sum_probs=34.9
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
+..||++.++|+.+.+. +.++|-|++...+++++++.+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g 111 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLG 111 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC
Confidence 45799999999999865 8999999999999999998874
No 146
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=79.71 E-value=0.78 Score=36.11 Aligned_cols=14 Identities=14% Similarity=0.245 Sum_probs=12.4
Q ss_pred eEEEeCCCceeEee
Q 041910 26 LLVLSPSRLLVHRA 39 (239)
Q Consensus 26 lLVLDLDeTLv~~~ 39 (239)
++++|+||||+.+.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47899999999985
No 147
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=79.71 E-value=2.1 Score=34.56 Aligned_cols=84 Identities=20% Similarity=0.172 Sum_probs=50.4
Q ss_pred EeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchhh
Q 041910 63 FKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKLW 140 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l~ 140 (239)
...|++.++|++|.+. +.++|=|++. ++..+++.+.-. ..+.+++..++-.. . +-++ .+.+-++++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~--~~f~~~~~~~~~~~---~----kp~p~~~~~~~~~~- 154 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLI--DYFDAIVDPAEIKK---G----KPDPEIFLAAAEGL- 154 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcH--hhCcEEEehhhcCC---C----CCChHHHHHHHHHc-
Confidence 5679999999999865 8888888653 466666665422 13444443332110 0 0011 223444444
Q ss_pred cccccCCCCCCCCCCEEEEECCchhhc
Q 041910 141 QKINTSNKYHFNESDTLLIDDNPYKAL 167 (239)
Q Consensus 141 ~~~~~~~~~~~dl~~tViIDDsp~~~~ 167 (239)
+ .+.+++|+|+|++.-+.
T Consensus 155 -------~--~~~~~~v~vgD~~~di~ 172 (185)
T TIGR01990 155 -------G--VSPSECIGIEDAQAGIE 172 (185)
T ss_pred -------C--CCHHHeEEEecCHHHHH
Confidence 2 56789999999986544
No 148
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=79.61 E-value=1.1 Score=38.63 Aligned_cols=15 Identities=7% Similarity=0.025 Sum_probs=13.2
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
+.+++|+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 578999999999974
No 149
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=79.42 E-value=1.1 Score=37.98 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=61.0
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC-ceEeecchh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP-LFFKDLNKL 139 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~-~~~KDL~~l 139 (239)
...-|++.+.|..+.+. +.++|-|+.....++.+++.+.-.. .|..+...+.+... ++ .+ ....-+.++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~--~F~~i~g~~~~~~~--KP-----~P~~l~~~~~~~ 158 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD--YFDVIVGGDDVPPP--KP-----DPEPLLLLLEKL 158 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc--ccceEEcCCCCCCC--Cc-----CHHHHHHHHHHh
Confidence 35789999999999975 8999999999999999999966443 45555442332211 00 11 111222333
Q ss_pred hcccccCCCCCCCCCCEEEEECCchhhccCCCCC
Q 041910 140 WQKINTSNKYHFNESDTLLIDDNPYKALLNPPNT 173 (239)
Q Consensus 140 ~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~ 173 (239)
+ .+.+++|+|=|+..-...--..+
T Consensus 159 --------~--~~~~~~l~VGDs~~Di~aA~~Ag 182 (220)
T COG0546 159 --------G--LDPEEALMVGDSLNDILAAKAAG 182 (220)
T ss_pred --------C--CChhheEEECCCHHHHHHHHHcC
Confidence 2 34469999999988766544443
No 150
>PLN02811 hydrolase
Probab=79.32 E-value=2.3 Score=35.87 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=57.3
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCC--cccccCCccccCCCCCceEeecch
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQE--ECTDSGFKSLEKKDKPLFFKDLNK 138 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~--~C~~~~~~~~e~~~k~~~~KDL~~ 138 (239)
+...||+.++|+.|.+. +.++|=|++.+.++...+.... .....+..+++.+ .+... ++. ...+.+=+++
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~-~l~~~f~~i~~~~~~~~~~~--KP~----p~~~~~a~~~ 149 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHG-ELFSLMHHVVTGDDPEVKQG--KPA----PDIFLAAARR 149 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccH-HHHhhCCEEEECChhhccCC--CCC----cHHHHHHHHH
Confidence 34679999999999875 9999999988776654322111 0011233455555 43211 110 0133344444
Q ss_pred hhcccccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 139 LWQKINTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 139 l~~~~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+. +.+.+.+++|+|+|++.-+..--..|+
T Consensus 150 ~~-------~~~~~~~~~v~IgDs~~di~aA~~aG~ 178 (220)
T PLN02811 150 FE-------DGPVDPGKVLVFEDAPSGVEAAKNAGM 178 (220)
T ss_pred hC-------CCCCCccceEEEeccHhhHHHHHHCCC
Confidence 41 012568999999999986655444444
No 151
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=79.21 E-value=1.2 Score=39.59 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=15.7
Q ss_pred CCCcceEEEeCCCceeEee
Q 041910 21 GPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~ 39 (239)
..+-+++|+||||||+.+.
T Consensus 37 ~~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 37 SALPEALLFDCDGVLVETE 55 (286)
T ss_pred ccCCcEEEEeCceeEEccc
Confidence 3355789999999999987
No 152
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=79.19 E-value=2.4 Score=42.72 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=36.3
Q ss_pred CCcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh--CcEEEEeCCCccccHHHHH
Q 041910 22 PKKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE--RFEVGIWSSAKERNVDTVL 96 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~--~fevvIwTsa~~~ya~~il 96 (239)
.++.++++|+||||+.....+.. ...-|.+.+.|+.|.+ ...|+|=|.-....++.++
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~-----------------~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~ 549 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPEL-----------------AVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWF 549 (726)
T ss_pred ccceEEEEecCccccCCCCCccc-----------------CCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHh
Confidence 46789999999999964322110 0123556677777776 4667777766655554443
No 153
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=78.70 E-value=0.99 Score=38.79 Aligned_cols=28 Identities=7% Similarity=0.014 Sum_probs=23.9
Q ss_pred EeCCChHHHHHHHHhCcEEEEeCCCccc
Q 041910 63 FKRPFVEDFMKFCFERFEVGIWSSAKER 90 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~fevvIwTsa~~~ 90 (239)
..-|++.++|+.|.+.+.++|-|++...
T Consensus 113 ~~~~gv~~~L~~L~~~~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKKWPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcCCCEEEEECCCch
Confidence 3458999999999988999999997764
No 154
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=78.01 E-value=1.2 Score=37.94 Aligned_cols=16 Identities=19% Similarity=0.164 Sum_probs=13.6
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
-+.++|||||||+.+.
T Consensus 10 ~k~vIFDlDGTL~d~~ 25 (224)
T PRK14988 10 VDTVLLDMDGTLLDLA 25 (224)
T ss_pred CCEEEEcCCCCccchh
Confidence 4679999999999953
No 155
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=77.81 E-value=0.81 Score=38.05 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=11.6
Q ss_pred EEEeCCCceeEee
Q 041910 27 LVLSPSRLLVHRA 39 (239)
Q Consensus 27 LVLDLDeTLv~~~ 39 (239)
+|+||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999885
No 156
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=77.40 E-value=3.7 Score=33.49 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=35.0
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
+..+|++.++|+++.+. +.++|-|++...+++.+++.+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g 118 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLN 118 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhC
Confidence 45799999999999864 9999999999999999998874
No 157
>PRK09449 dUMP phosphatase; Provisional
Probab=77.31 E-value=1.1 Score=37.67 Aligned_cols=14 Identities=14% Similarity=0.328 Sum_probs=12.2
Q ss_pred ceEEEeCCCceeEe
Q 041910 25 KLLVLSPSRLLVHR 38 (239)
Q Consensus 25 ~lLVLDLDeTLv~~ 38 (239)
+++++||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 57999999999963
No 158
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=77.12 E-value=1.2 Score=37.08 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=13.6
Q ss_pred ceEEEeCCCceeEeec
Q 041910 25 KLLVLSPSRLLVHRAH 40 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~ 40 (239)
+.+++|+||||+.+..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 5789999999998753
No 159
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=77.06 E-value=1.1 Score=36.88 Aligned_cols=15 Identities=27% Similarity=0.171 Sum_probs=13.0
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
+.++||+||||++..
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 468999999999875
No 160
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=76.94 E-value=4 Score=34.26 Aligned_cols=51 Identities=10% Similarity=-0.065 Sum_probs=36.3
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCC
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSS 86 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTs 86 (239)
..+.|+||.||||+--.... .. .---..+.|++.+=|..+.+. |.++|+|-
T Consensus 4 ~~k~lflDRDGtin~d~~~y---------v~----~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 4 DQKALFLDRDGTINIDKGDY---------VD----SLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CCcEEEEcCCCceecCCCcc---------cC----cHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 37899999999998432110 00 011235789999999999764 99999997
No 161
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=76.63 E-value=3.2 Score=43.83 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=63.4
Q ss_pred eCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhcc
Q 041910 64 KRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQK 142 (239)
Q Consensus 64 ~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~~ 142 (239)
..||+.++|++|.+. +.++|-|++...+++.+++.+.-.. ..|..+...+++... ++. -..+.+-++++
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~-~~Fd~iv~~~~~~~~--KP~----Pe~~~~a~~~l--- 231 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPL-SMFDAIVSADAFENL--KPA----PDIFLAAAKIL--- 231 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCCh-hHCCEEEECcccccC--CCC----HHHHHHHHHHc---
Confidence 479999999999865 9999999999999999988864321 134555555554321 110 01344455555
Q ss_pred cccCCCCCCCCCCEEEEECCchhhccCCCCCc
Q 041910 143 INTSNKYHFNESDTLLIDDNPYKALLNPPNTS 174 (239)
Q Consensus 143 ~~~~~~~~~dl~~tViIDDsp~~~~~~p~N~i 174 (239)
+ .+.+++|+|+|++.-+..--..|+
T Consensus 232 -----g--v~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 232 -----G--VPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred -----C--cCcccEEEEcCCHHHHHHHHHcCC
Confidence 2 578999999999876554444443
No 162
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=76.41 E-value=1.1 Score=36.23 Aligned_cols=15 Identities=7% Similarity=0.246 Sum_probs=12.8
Q ss_pred eEEEeCCCceeEeec
Q 041910 26 LLVLSPSRLLVHRAH 40 (239)
Q Consensus 26 lLVLDLDeTLv~~~~ 40 (239)
.+++|+||||+.+..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999998864
No 163
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=76.27 E-value=1.2 Score=35.83 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=50.7
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhc
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQ 141 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~ 141 (239)
+..+|++.++|+. ++|-|++...++..+++...-.. .+..+++.+..... ++. ...|.+=++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~--~fd~v~~~~~~~~~--KP~----p~~f~~~~~~~-- 152 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW--YFDRAFSVDTVRAY--KPD----PVVYELVFDTV-- 152 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH--HHhhhccHhhcCCC--CCC----HHHHHHHHHHH--
Confidence 4578999999983 78999999999999888864221 33334444432210 000 11344555555
Q ss_pred ccccCCCCCCCCCCEEEEECCch
Q 041910 142 KINTSNKYHFNESDTLLIDDNPY 164 (239)
Q Consensus 142 ~~~~~~~~~~dl~~tViIDDsp~ 164 (239)
| .+.+++|+|+|++.
T Consensus 153 ------~--~~p~~~l~vgD~~~ 167 (175)
T TIGR01493 153 ------G--LPPDRVLMVAAHQW 167 (175)
T ss_pred ------C--CCHHHeEeEecChh
Confidence 3 57899999999964
No 164
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=75.83 E-value=1.4 Score=36.89 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=13.7
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
-+++++|+||||+++.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 4589999999999875
No 165
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=75.75 E-value=1 Score=37.38 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=11.4
Q ss_pred EEEeCCCceeEee
Q 041910 27 LVLSPSRLLVHRA 39 (239)
Q Consensus 27 LVLDLDeTLv~~~ 39 (239)
+|+|+||||+.+.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999875
No 166
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=75.71 E-value=1.6 Score=36.39 Aligned_cols=15 Identities=13% Similarity=0.259 Sum_probs=13.0
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
+.+++||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999864
No 167
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=75.59 E-value=1.5 Score=35.86 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=13.4
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
.+++|+|+||||+...
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 4589999999999753
No 168
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=74.85 E-value=1.5 Score=37.00 Aligned_cols=17 Identities=12% Similarity=0.176 Sum_probs=14.5
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
.-+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35788999999999875
No 169
>PLN02954 phosphoserine phosphatase
Probab=74.85 E-value=1.6 Score=36.58 Aligned_cols=39 Identities=15% Similarity=0.008 Sum_probs=34.9
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
...+|++.++|+++.+. ..++|=|++.+.+++.+++.+.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~g 122 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILG 122 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhC
Confidence 45789999999999865 8999999999999999999874
No 170
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=74.71 E-value=3.7 Score=34.67 Aligned_cols=40 Identities=18% Similarity=0.039 Sum_probs=36.4
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhc
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~ 101 (239)
+..+|+..+||+.+.+...++|=|++...+++++++.+.-
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCC
Confidence 4679999999999998889999999999999999998753
No 171
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=74.60 E-value=1.7 Score=36.54 Aligned_cols=17 Identities=12% Similarity=0.129 Sum_probs=14.2
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
+-+.+++|+||||+.+.
T Consensus 3 ~~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCCEEEECCCCCCCCCh
Confidence 35689999999999874
No 172
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=74.31 E-value=1.7 Score=36.42 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=15.0
Q ss_pred CCcceEEEeCCCceeEee
Q 041910 22 PKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~ 39 (239)
..++.+++|+||||+.+.
T Consensus 12 ~~~k~iiFD~DGTL~~~~ 29 (219)
T TIGR00338 12 RSKKLVVFDMDSTLINAE 29 (219)
T ss_pred ccCCEEEEeCcccCCCch
Confidence 356789999999999864
No 173
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=74.31 E-value=1.8 Score=34.97 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=34.9
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
+..+|++.++|+.+.+. +.++|-|++...+++.+++.+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~ 110 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIG 110 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcC
Confidence 57899999999999865 8999999999999999988864
No 174
>PLN02954 phosphoserine phosphatase
Probab=74.17 E-value=5.2 Score=33.50 Aligned_cols=18 Identities=0% Similarity=-0.014 Sum_probs=15.2
Q ss_pred CCcceEEEeCCCceeEee
Q 041910 22 PKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~ 39 (239)
...+++|+|+||||+.+.
T Consensus 10 ~~~k~viFDfDGTL~~~~ 27 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDE 27 (224)
T ss_pred ccCCEEEEeCCCcccchH
Confidence 457899999999999764
No 175
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=74.04 E-value=1.5 Score=34.42 Aligned_cols=14 Identities=14% Similarity=0.252 Sum_probs=12.1
Q ss_pred EEEeCCCceeEeec
Q 041910 27 LVLSPSRLLVHRAH 40 (239)
Q Consensus 27 LVLDLDeTLv~~~~ 40 (239)
++||+||||+++..
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 68999999998764
No 176
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=73.67 E-value=0.67 Score=37.35 Aligned_cols=13 Identities=23% Similarity=0.199 Sum_probs=11.7
Q ss_pred EEEeCCCceeEee
Q 041910 27 LVLSPSRLLVHRA 39 (239)
Q Consensus 27 LVLDLDeTLv~~~ 39 (239)
|++||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 6899999999876
No 177
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=73.38 E-value=1.8 Score=37.02 Aligned_cols=42 Identities=14% Similarity=-0.078 Sum_probs=38.4
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCC
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKL 103 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~ 103 (239)
...+|+..+.++++.+. +.++|-|+|-..++++|.+.+--+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~ 118 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY 118 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch
Confidence 78999999999999987 9999999999999999999987543
No 178
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=73.24 E-value=2 Score=37.19 Aligned_cols=77 Identities=12% Similarity=0.007 Sum_probs=44.0
Q ss_pred CCcceEEEeCCCceeEeecc-C-CC-CCCCCCCCCCcc---ccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHH
Q 041910 22 PKKKLLVLSPSRLLVHRAHR-A-NK-ATIPQNRMPDAI---NGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDT 94 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~~-~-~~-~~~~~~~~~d~~---~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~ 94 (239)
.+++.+|||+|||++....- . .. .....+ ..++. ..+.. ..=|+..+|++++.+. +.|++=|.-.+..-+.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~-~~~w~~wv~~~~~-~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~ 147 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFS-PEDWDEWVASGKA-PAIPGALELYNYARSRGVKVFFITGRPESQREA 147 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH--CCHHHHHHHCTGG-EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCC-hHHHHHHHhcccC-cccHHHHHHHHHHHHCCCeEEEEecCCchhHHH
Confidence 57899999999999954321 0 00 000000 00110 01111 4558899999999987 6777767665555555
Q ss_pred HHHHHh
Q 041910 95 VLYCAM 100 (239)
Q Consensus 95 il~~id 100 (239)
-++.|.
T Consensus 148 T~~nL~ 153 (229)
T PF03767_consen 148 TEKNLK 153 (229)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 179
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=73.12 E-value=1.7 Score=34.82 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=12.3
Q ss_pred EEEeCCCceeEeec
Q 041910 27 LVLSPSRLLVHRAH 40 (239)
Q Consensus 27 LVLDLDeTLv~~~~ 40 (239)
+++||||||+.+..
T Consensus 2 vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 2 ILFDLDGVLVDTSS 15 (183)
T ss_pred eeeccCCceechHH
Confidence 78999999999853
No 180
>PLN02382 probable sucrose-phosphatase
Probab=72.92 E-value=2.2 Score=40.20 Aligned_cols=17 Identities=12% Similarity=0.247 Sum_probs=14.1
Q ss_pred CCcceEEEeCCCceeEe
Q 041910 22 PKKKLLVLSPSRLLVHR 38 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~ 38 (239)
+.+++||.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 35788899999999954
No 181
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=72.69 E-value=4.9 Score=34.90 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=60.1
Q ss_pred EEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCCceEeecchhhc
Q 041910 62 VFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKPLFFKDLNKLWQ 141 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~~~~KDL~~l~~ 141 (239)
+..=|-|++||-.|.+.. ..+||.|-+.-|..++..|--+. +|..=-|..+-. + ..++...|....-++
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD------cFegii~~e~~n-p---~~~~~vcKP~~~afE 167 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED------CFEGIICFETLN-P---IEKTVVCKPSEEAFE 167 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH------hccceeEeeccC-C---CCCceeecCCHHHHH
Confidence 566778999999998877 88999999999999999985221 111111211100 0 013345566666554
Q ss_pred ccccCCCCCCCCCCEEEEECCchhhccCC
Q 041910 142 KINTSNKYHFNESDTLLIDDNPYKALLNP 170 (239)
Q Consensus 142 ~~~~~~~~~~dl~~tViIDDsp~~~~~~p 170 (239)
+--.-.|. -+..||+.+|||..+...--
T Consensus 168 ~a~k~agi-~~p~~t~FfDDS~~NI~~ak 195 (244)
T KOG3109|consen 168 KAMKVAGI-DSPRNTYFFDDSERNIQTAK 195 (244)
T ss_pred HHHHHhCC-CCcCceEEEcCchhhHHHHH
Confidence 32110121 24899999999998765433
No 182
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=70.92 E-value=2 Score=36.62 Aligned_cols=15 Identities=20% Similarity=0.286 Sum_probs=13.2
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
+-+++|||||||.+.
T Consensus 3 ~avIFD~DGvLvDse 17 (221)
T COG0637 3 KAVIFDMDGTLVDSE 17 (221)
T ss_pred cEEEEcCCCCcCcch
Confidence 468999999999985
No 183
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=69.65 E-value=2.8 Score=38.21 Aligned_cols=39 Identities=13% Similarity=-0.076 Sum_probs=34.7
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
+..+||+.++|+.+.+. +.++|-|++...+++.+.+.+.
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lg 219 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLR 219 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcC
Confidence 55899999999999976 8999999999999999888764
No 184
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=69.33 E-value=18 Score=29.70 Aligned_cols=66 Identities=12% Similarity=-0.015 Sum_probs=43.5
Q ss_pred CcceEEEeCCCceeEee--ccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcEEEEeCCCccccHHHHHHHHh
Q 041910 23 KKKLLVLSPSRLLVHRA--HRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~--~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fevvIwTsa~~~ya~~il~~id 100 (239)
.-+++|+|.||||-.-. ...... ....+..|-+.--.+-. ...+.++|-|+....++..+++.+.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~------------~~~~~~~~D~~~~~~L~-~~Gi~laIiT~k~~~~~~~~l~~lg 72 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGI------------ESRNFDIKDGMGVIVLQ-LCGIDVAIITSKKSGAVRHRAEELK 72 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCc------------EEEEEecchHHHHHHHH-HCCCEEEEEECCCcHHHHHHHHHCC
Confidence 46789999999998543 111111 11234555555433221 3469999999999999999999884
Q ss_pred c
Q 041910 101 G 101 (239)
Q Consensus 101 ~ 101 (239)
-
T Consensus 73 i 73 (169)
T TIGR02726 73 I 73 (169)
T ss_pred C
Confidence 3
No 185
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=67.95 E-value=2.6 Score=35.67 Aligned_cols=13 Identities=23% Similarity=0.296 Sum_probs=11.3
Q ss_pred eEEEeCCCceeEe
Q 041910 26 LLVLSPSRLLVHR 38 (239)
Q Consensus 26 lLVLDLDeTLv~~ 38 (239)
+.++||||||+..
T Consensus 3 la~FDlD~TLi~~ 15 (203)
T TIGR02137 3 IACLDLEGVLVPE 15 (203)
T ss_pred EEEEeCCcccHHH
Confidence 5899999999964
No 186
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=67.47 E-value=3.5 Score=38.55 Aligned_cols=19 Identities=5% Similarity=-0.029 Sum_probs=16.0
Q ss_pred CCCcceEEEeCCCceeEee
Q 041910 21 GPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 21 ~~~k~lLVLDLDeTLv~~~ 39 (239)
...-+.+|+||||||+.+.
T Consensus 128 ~~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred cCCCCEEEEcCcCcceeCH
Confidence 3477889999999999875
No 187
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=67.15 E-value=2.5 Score=40.11 Aligned_cols=16 Identities=13% Similarity=0.233 Sum_probs=13.9
Q ss_pred ceEEEeCCCceeEeec
Q 041910 25 KLLVLSPSRLLVHRAH 40 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~ 40 (239)
..++|||||||+++..
T Consensus 242 k~vIFDlDGTLiDs~~ 257 (459)
T PRK06698 242 QALIFDMDGTLFQTDK 257 (459)
T ss_pred hheeEccCCceecchh
Confidence 5789999999998864
No 188
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=66.18 E-value=12 Score=33.45 Aligned_cols=79 Identities=6% Similarity=-0.081 Sum_probs=43.7
Q ss_pred CcceEEEeCCCceeEeeccC--CC-CCCCCC-CCCC-ccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRA--NK-ATIPQN-RMPD-AINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVL 96 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~--~~-~~~~~~-~~~d-~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il 96 (239)
.+-.+|||+|||++....-. .. ...+.+ ...+ .-+..-..-.=|+.-+|++++.++ +.|++-|.-.+..-+.=+
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 57899999999999543210 00 000000 0000 000000112347888999999865 888888887765555555
Q ss_pred HHHhc
Q 041910 97 YCAMG 101 (239)
Q Consensus 97 ~~id~ 101 (239)
+.|-.
T Consensus 180 ~NL~k 184 (275)
T TIGR01680 180 ANLKK 184 (275)
T ss_pred HHHHH
Confidence 55543
No 189
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=65.85 E-value=3.1 Score=35.29 Aligned_cols=37 Identities=11% Similarity=0.232 Sum_probs=32.4
Q ss_pred EeCCChHHHHH-HHH-hCcEEEEeCCCccccHHHHHHHH
Q 041910 63 FKRPFVEDFMK-FCF-ERFEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 63 ~~RP~l~eFL~-~l~-~~fevvIwTsa~~~ya~~il~~i 99 (239)
..+|++.+.|+ .+. +...++|=|++...+++++++..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 56999999996 777 47999999999999999998763
No 190
>PLN02940 riboflavin kinase
Probab=64.79 E-value=3.1 Score=38.74 Aligned_cols=16 Identities=13% Similarity=0.175 Sum_probs=13.5
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
-+.+++|+||||+.+.
T Consensus 11 ik~VIFDlDGTLvDt~ 26 (382)
T PLN02940 11 VSHVILDLDGTLLNTD 26 (382)
T ss_pred CCEEEECCcCcCCcCH
Confidence 4568999999999875
No 191
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=64.41 E-value=2.8 Score=35.77 Aligned_cols=13 Identities=15% Similarity=0.268 Sum_probs=11.3
Q ss_pred eEEEeCCCceeEe
Q 041910 26 LLVLSPSRLLVHR 38 (239)
Q Consensus 26 lLVLDLDeTLv~~ 38 (239)
+++.||||||+..
T Consensus 1 li~~DlDgTLl~~ 13 (236)
T TIGR02471 1 LIITDLDNTLLGD 13 (236)
T ss_pred CeEEeccccccCC
Confidence 5789999999975
No 192
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=63.74 E-value=3.7 Score=33.99 Aligned_cols=14 Identities=14% Similarity=0.328 Sum_probs=12.4
Q ss_pred eEEEeCCCceeEee
Q 041910 26 LLVLSPSRLLVHRA 39 (239)
Q Consensus 26 lLVLDLDeTLv~~~ 39 (239)
++|+||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999864
No 193
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=61.65 E-value=4.3 Score=34.26 Aligned_cols=16 Identities=0% Similarity=-0.066 Sum_probs=13.7
Q ss_pred cceEEEeCCCceeEee
Q 041910 24 KKLLVLSPSRLLVHRA 39 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~ 39 (239)
++++++|+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 5689999999999765
No 194
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=60.78 E-value=3.8 Score=32.76 Aligned_cols=14 Identities=14% Similarity=0.207 Sum_probs=11.7
Q ss_pred eEEEeCCCceeEee
Q 041910 26 LLVLSPSRLLVHRA 39 (239)
Q Consensus 26 lLVLDLDeTLv~~~ 39 (239)
++|+|+||||+...
T Consensus 1 l~~fD~DgTl~~~~ 14 (177)
T TIGR01488 1 LAIFDFDGTLTRQD 14 (177)
T ss_pred CEEecCccccccch
Confidence 47899999999764
No 195
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=59.72 E-value=7.7 Score=40.08 Aligned_cols=17 Identities=12% Similarity=0.237 Sum_probs=14.2
Q ss_pred CCcceEEEeCCCceeEe
Q 041910 22 PKKKLLVLSPSRLLVHR 38 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~ 38 (239)
.++.+|+||+||||+..
T Consensus 594 ~~~rlI~LDyDGTLlp~ 610 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQ 610 (854)
T ss_pred hcCeEEEEecCCcccCC
Confidence 36788999999999944
No 196
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=59.43 E-value=19 Score=29.46 Aligned_cols=51 Identities=6% Similarity=0.081 Sum_probs=32.7
Q ss_pred eEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCC
Q 041910 26 LLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSA 87 (239)
Q Consensus 26 lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa 87 (239)
.+|-|+|||+--+..... . ..+-+.- +.|||+.++...+.++ |.++=-||-
T Consensus 1 VVvsDIDGTiT~SD~~G~--------i--~~~~G~d-~~h~g~~~l~~~i~~~GY~ilYlTaR 52 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGH--------I--LPILGKD-WTHPGAAELYRKIADNGYKILYLTAR 52 (157)
T ss_pred CEEEeccCCcCccchhhh--------h--hhccCch-hhhhcHHHHHHHHHHCCeEEEEECcC
Confidence 368899999987642110 0 0011122 8999999999999987 655444443
No 197
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=58.81 E-value=13 Score=29.78 Aligned_cols=17 Identities=12% Similarity=0.042 Sum_probs=14.1
Q ss_pred cceEEEeCCCceeEeec
Q 041910 24 KKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 24 k~lLVLDLDeTLv~~~~ 40 (239)
|.++|+|+||||+....
T Consensus 1 ~~~iiFD~dgTL~~~~~ 17 (188)
T TIGR01489 1 KVVVVSDFDGTITLNDS 17 (188)
T ss_pred CeEEEEeCCCcccCCCc
Confidence 56899999999997643
No 198
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=58.38 E-value=5 Score=34.91 Aligned_cols=13 Identities=23% Similarity=0.299 Sum_probs=12.0
Q ss_pred cceEEEeCCCcee
Q 041910 24 KKLLVLSPSRLLV 36 (239)
Q Consensus 24 k~lLVLDLDeTLv 36 (239)
+.+||-||||||+
T Consensus 2 ~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 2 PRLLASDLDGTLI 14 (247)
T ss_dssp SEEEEEETBTTTB
T ss_pred CEEEEEECCCCCc
Confidence 6789999999999
No 199
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=57.01 E-value=24 Score=25.56 Aligned_cols=23 Identities=22% Similarity=0.176 Sum_probs=18.2
Q ss_pred cccCCCCcceEEEeCCCceeEee
Q 041910 17 KLNLGPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 17 ~l~~~~~k~lLVLDLDeTLv~~~ 39 (239)
++.......+|||+=|||.|...
T Consensus 33 ~l~~~~~~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 33 ALVITSGLVTLVLEEDGTVVDTE 55 (78)
T ss_pred HhCCCCCCcEEEEeCCCCEEccH
Confidence 34555568999999999999765
No 200
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=56.59 E-value=23 Score=34.62 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=34.7
Q ss_pred EeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 63 FKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
..||+..+.++++.+. +.++|-|...+.+|+.+++.+.
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lg 443 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG 443 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcC
Confidence 5899999999999875 8999999999999999999874
No 201
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=55.35 E-value=9.9 Score=33.46 Aligned_cols=41 Identities=24% Similarity=0.212 Sum_probs=31.9
Q ss_pred ceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHH
Q 041910 59 GHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 59 ~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~i 99 (239)
...+.+|.|..+|++.|.++ --+.|||||.-.-++.+++..
T Consensus 86 ~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~ 127 (246)
T PF05822_consen 86 ESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA 127 (246)
T ss_dssp CS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT
T ss_pred hcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc
Confidence 45689999999999999987 789999999999999998886
No 202
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=55.27 E-value=7.2 Score=32.47 Aligned_cols=18 Identities=11% Similarity=0.076 Sum_probs=14.6
Q ss_pred CcceEEEeCCCceeEeec
Q 041910 23 KKKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~ 40 (239)
..+.+++|+||||++...
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 456889999999998753
No 203
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=53.69 E-value=27 Score=29.48 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.2
Q ss_pred CcceEEEeCCCceeEeec
Q 041910 23 KKKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~ 40 (239)
..+++++||||||+.+..
T Consensus 3 ~~~~iiFDlDGTL~Ds~~ 20 (220)
T COG0546 3 MIKAILFDLDGTLVDSAE 20 (220)
T ss_pred CCCEEEEeCCCccccChH
Confidence 457899999999998864
No 204
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=53.53 E-value=14 Score=30.23 Aligned_cols=39 Identities=10% Similarity=0.017 Sum_probs=34.5
Q ss_pred EeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 63 FKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
..+|++.++|+.+.+. +.++|-|++...+++.+++.+.-
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~ 126 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGI 126 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCC
Confidence 5799999999999864 89999999999999999987653
No 205
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=53.15 E-value=18 Score=30.77 Aligned_cols=16 Identities=31% Similarity=0.355 Sum_probs=14.3
Q ss_pred CCcceEEEeCCCceeE
Q 041910 22 PKKKLLVLSPSRLLVH 37 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~ 37 (239)
..++++|+|||+||+.
T Consensus 3 ~~~~L~vFD~D~TLi~ 18 (212)
T COG0560 3 RMKKLAVFDLDGTLIN 18 (212)
T ss_pred CccceEEEecccchhh
Confidence 3678999999999998
No 206
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=52.67 E-value=1.2e+02 Score=24.27 Aligned_cols=78 Identities=6% Similarity=-0.163 Sum_probs=51.5
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC-cEEEEeCCCc-cccHHHHHHHHh
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER-FEVGIWSSAK-ERNVDTVLYCAM 100 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~-~~ya~~il~~id 100 (239)
++...++|||-|++-+--..+....-.....+....+.-...-|-...-|..|.+. -++++=|-+. +++|...++.+-
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fk 83 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFK 83 (144)
T ss_pred CCceeEEeccceeeeEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhc
Confidence 56778899999998665332111000111112223456778889999999999986 6777766554 489999998876
No 207
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=51.49 E-value=32 Score=24.85 Aligned_cols=23 Identities=30% Similarity=0.245 Sum_probs=18.3
Q ss_pred cccCCCCcceEEEeCCCceeEee
Q 041910 17 KLNLGPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 17 ~l~~~~~k~lLVLDLDeTLv~~~ 39 (239)
++.......+|||+-|||.|...
T Consensus 33 ~l~l~~~~~~lvL~eDGTeVddE 55 (78)
T cd01615 33 KLKLPSAPVTLVLEEDGTEVDDE 55 (78)
T ss_pred HcCCCCCCeEEEEeCCCcEEccH
Confidence 45555678899999999999764
No 208
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=51.47 E-value=19 Score=33.17 Aligned_cols=42 Identities=12% Similarity=0.119 Sum_probs=38.0
Q ss_pred ceEEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHh
Q 041910 59 GHLVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 59 ~~~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id 100 (239)
.-++.+-|++.++|+.+.+. ..++|=|++...|++.+++.+.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~ 222 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLL 222 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhh
Confidence 35788899999999999876 8999999999999999999983
No 209
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=51.24 E-value=10 Score=31.34 Aligned_cols=29 Identities=14% Similarity=0.073 Sum_probs=20.3
Q ss_pred EEeCCChHHHHHHHHhC-cEEEEeCCCccc
Q 041910 62 VFKRPFVEDFMKFCFER-FEVGIWSSAKER 90 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ 90 (239)
.-.=||+.|.|+.|.+. +++++-||+...
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 45669999999999987 477777776654
No 210
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=51.08 E-value=6.7 Score=32.18 Aligned_cols=13 Identities=8% Similarity=0.038 Sum_probs=11.3
Q ss_pred EEEeCCCceeEee
Q 041910 27 LVLSPSRLLVHRA 39 (239)
Q Consensus 27 LVLDLDeTLv~~~ 39 (239)
.++|+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999864
No 211
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=51.03 E-value=32 Score=24.62 Aligned_cols=23 Identities=30% Similarity=0.302 Sum_probs=18.1
Q ss_pred cccCCCCcceEEEeCCCceeEee
Q 041910 17 KLNLGPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 17 ~l~~~~~k~lLVLDLDeTLv~~~ 39 (239)
++.......+|||+=|||.|...
T Consensus 31 ~l~l~~~~~~l~L~eDGT~VddE 53 (74)
T smart00266 31 KLALPDSPVTLVLEEDGTIVDDE 53 (74)
T ss_pred HhCCCCCCcEEEEecCCcEEccH
Confidence 34555568899999999999765
No 212
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=47.09 E-value=14 Score=31.48 Aligned_cols=50 Identities=12% Similarity=0.111 Sum_probs=29.8
Q ss_pred EEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhCcE--EEEeCCCccccHHH
Q 041910 28 VLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFERFE--VGIWSSAKERNVDT 94 (239)
Q Consensus 28 VLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~fe--vvIwTsa~~~ya~~ 94 (239)
.||.||||.--...+ .....-|.+.+.|+.|++... |+|-|.-.....+.
T Consensus 1 ~lDyDGTL~p~~~~p-----------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~ 52 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP-----------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLER 52 (235)
T ss_dssp EEE-TTTSS---S-G-----------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHH
T ss_pred CcccCCccCCCCCCc-----------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHH
Confidence 489999998654322 123567889999999998876 88888876666333
No 213
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=46.15 E-value=23 Score=36.36 Aligned_cols=61 Identities=16% Similarity=0.090 Sum_probs=39.2
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC--cEEEEeCCCccccHHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER--FEVGIWSSAKERNVDTVLY 97 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~--fevvIwTsa~~~ya~~il~ 97 (239)
++.+|+||.||||+.-...+.. ...+..-|.+.+-|+.|++. -.|+|-|.-...-.+..+.
T Consensus 506 ~~rll~LDyDGTL~~~~~~~~~--------------p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 506 NNRLLILGFYGTLTEPRNSQIK--------------EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred cCeEEEEecCccccCCCCCccc--------------cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 5678899999999943211100 01233457788888888864 5788888766666555543
No 214
>PRK11590 hypothetical protein; Provisional
Probab=44.88 E-value=33 Score=28.73 Aligned_cols=16 Identities=6% Similarity=0.281 Sum_probs=13.7
Q ss_pred CcceEEEeCCCceeEe
Q 041910 23 KKKLLVLSPSRLLVHR 38 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~ 38 (239)
.++++++|+||||++.
T Consensus 5 ~~k~~iFD~DGTL~~~ 20 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ 20 (211)
T ss_pred cceEEEEecCCCCccc
Confidence 5679999999999944
No 215
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=42.54 E-value=35 Score=35.70 Aligned_cols=68 Identities=12% Similarity=0.094 Sum_probs=43.2
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHhC--cEEEEeCCCccccHHHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFER--FEVGIWSSAKERNVDTVLYC 98 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~~--fevvIwTsa~~~ya~~il~~ 98 (239)
++.+|+||.||||+.-...+... + . ++..+.+..-|.+.+.|+.|+.. -.|+|-|.-...-.+..+..
T Consensus 590 ~~RLlfLDyDGTLap~~~~P~~~--~-----~-~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 590 NNRLLILGFNATLTEPVDTPGRR--G-----D-QIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred cceEEEEecCceeccCCCCcccc--c-----c-cccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 56788899999998654322100 0 0 00111233446788899999965 67888888777777666544
No 216
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=41.74 E-value=53 Score=23.91 Aligned_cols=17 Identities=24% Similarity=0.110 Sum_probs=14.8
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
...+|||+=|||.|...
T Consensus 38 ~~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 38 GVLTLVLEEDGTAVDSE 54 (81)
T ss_pred CceEEEEecCCCEEccH
Confidence 45999999999999765
No 217
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=41.12 E-value=14 Score=32.39 Aligned_cols=14 Identities=21% Similarity=0.411 Sum_probs=0.0
Q ss_pred CcceEEEeCCCcee
Q 041910 23 KKKLLVLSPSRLLV 36 (239)
Q Consensus 23 ~k~lLVLDLDeTLv 36 (239)
...+||+|+|+||+
T Consensus 19 ~~tLvvfDiDdTLi 32 (252)
T PF11019_consen 19 QDTLVVFDIDDTLI 32 (252)
T ss_pred CCeEEEEEcchhhh
No 218
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=40.30 E-value=27 Score=28.48 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=29.5
Q ss_pred EeCCChHHHHHHHHhCcEEEEeCCCcccc--HHHHHHHHh
Q 041910 63 FKRPFVEDFMKFCFERFEVGIWSSAKERN--VDTVLYCAM 100 (239)
Q Consensus 63 ~~RP~l~eFL~~l~~~fevvIwTsa~~~y--a~~il~~id 100 (239)
..-||.++-++++.++|+|.|=||++-.+ .+.-.+.|-
T Consensus 68 ~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~ 107 (180)
T COG4502 68 GVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLK 107 (180)
T ss_pred CccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHH
Confidence 45689999999999999999999996554 444455554
No 219
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=39.53 E-value=37 Score=30.86 Aligned_cols=17 Identities=18% Similarity=0.188 Sum_probs=14.4
Q ss_pred CCcceEEEeCCCceeEe
Q 041910 22 PKKKLLVLSPSRLLVHR 38 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~ 38 (239)
+++.++|+|+||||+..
T Consensus 108 ~~~~LvvfDmDGTLI~~ 124 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI 124 (322)
T ss_pred cCCCEEEEECCCCCcch
Confidence 36789999999999954
No 220
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=39.31 E-value=33 Score=27.85 Aligned_cols=41 Identities=15% Similarity=0.015 Sum_probs=36.1
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhc
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
.-..||++.++|+.|.+. +.++|-|......|..+.+.+.-
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccc
Confidence 335799999999999987 89999999999999999998754
No 221
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=38.95 E-value=27 Score=27.98 Aligned_cols=36 Identities=11% Similarity=0.030 Sum_probs=30.9
Q ss_pred CCChH----HHHHHHH-hCcEEEEeCCCccccHHHHHHHHh
Q 041910 65 RPFVE----DFMKFCF-ERFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 65 RP~l~----eFL~~l~-~~fevvIwTsa~~~ya~~il~~id 100 (239)
+|++. +||+++. ..+.++|=|++...+++++++.+.
T Consensus 87 ~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~ 127 (192)
T PF12710_consen 87 FPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLG 127 (192)
T ss_dssp CTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTT
T ss_pred CcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC
Confidence 46666 9999985 579999999999999999998665
No 222
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=38.88 E-value=15 Score=30.26 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=15.7
Q ss_pred EEEECCchhhccCCCCC---cccCCCC
Q 041910 157 LLIDDNPYKALLNPPNT---SIFPEAY 180 (239)
Q Consensus 157 ViIDDsp~~~~~~p~N~---ii~p~~~ 180 (239)
|+|||+|..+..-...+ ++...+|
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~ 165 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPY 165 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GG
T ss_pred EEecCChHHHHhccCCCceEEEEcCCC
Confidence 89999999987655555 3444455
No 223
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=38.79 E-value=18 Score=29.40 Aligned_cols=15 Identities=7% Similarity=0.158 Sum_probs=12.3
Q ss_pred ceEEEeCCCceeEee
Q 041910 25 KLLVLSPSRLLVHRA 39 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~ 39 (239)
.++++|.||||....
T Consensus 2 ~~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK 16 (215)
T ss_dssp SEEEEECCTTTBESH
T ss_pred eEEEEecCCCcccCe
Confidence 378999999997654
No 224
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=38.08 E-value=70 Score=23.20 Aligned_cols=17 Identities=24% Similarity=0.040 Sum_probs=14.5
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
...+|||+=|||.|...
T Consensus 38 ~~~~lvL~eDGT~Vd~E 54 (79)
T cd06538 38 CISSLVLDEDGTGVDTE 54 (79)
T ss_pred CccEEEEecCCcEEccH
Confidence 35899999999999764
No 225
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=37.90 E-value=20 Score=37.93 Aligned_cols=18 Identities=11% Similarity=0.202 Sum_probs=14.7
Q ss_pred CcceEEEeCCCceeEeec
Q 041910 23 KKKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~ 40 (239)
+-+.+++||||||+++..
T Consensus 74 ~ikaVIFDlDGTLiDS~~ 91 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEE 91 (1057)
T ss_pred CCCEEEECCCCCeEeChH
Confidence 445689999999999863
No 226
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=37.35 E-value=91 Score=27.42 Aligned_cols=55 Identities=11% Similarity=-0.030 Sum_probs=30.8
Q ss_pred CcceEEEeCCCceeEeeccCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHHh-CcEEEEeCCCccccHHHHHHHHh
Q 041910 23 KKKLLVLSPSRLLVHRAHRANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCFE-RFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~~-~fevvIwTsa~~~ya~~il~~id 100 (239)
-..++.+|||+||+-...... | ..+-+..+.+ .|+|+.=||-+..-....=+.|.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~----------------------p-A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~ 61 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQ----------------------P-AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLG 61 (274)
T ss_pred cceEEEEcccCcccCCCCCCC----------------------c-cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcC
Confidence 356677899999996333221 1 1223444554 58887777655443333444454
No 227
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=37.32 E-value=55 Score=30.85 Aligned_cols=19 Identities=11% Similarity=0.214 Sum_probs=15.8
Q ss_pred CCcceEEEeCCCceeEeec
Q 041910 22 PKKKLLVLSPSRLLVHRAH 40 (239)
Q Consensus 22 ~~k~lLVLDLDeTLv~~~~ 40 (239)
...+...+|||||||....
T Consensus 73 ~~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CCcceEEEecCCceeecCC
Confidence 3677889999999998764
No 228
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=36.55 E-value=54 Score=27.67 Aligned_cols=17 Identities=12% Similarity=0.276 Sum_probs=14.8
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
-+++.++|+||||.++.
T Consensus 4 ~~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD 20 (210)
T ss_pred cCcEEEEcCCCCCccCc
Confidence 57789999999999875
No 229
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=35.45 E-value=52 Score=28.63 Aligned_cols=40 Identities=20% Similarity=0.249 Sum_probs=35.0
Q ss_pred EEEeCCChHHHHHHHHh---CcEEEEeCCCccccHHHHHHHHh
Q 041910 61 LVFKRPFVEDFMKFCFE---RFEVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~---~fevvIwTsa~~~ya~~il~~id 100 (239)
.+-.-||+.+|++++++ .++++|=|-|..-|.+.+++.-.
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~g 111 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHG 111 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCC
Confidence 45678999999999954 69999999999999999998754
No 230
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=34.62 E-value=13 Score=21.02 Aligned_cols=8 Identities=38% Similarity=1.016 Sum_probs=5.9
Q ss_pred CCcchhhc
Q 041910 228 PDWRFYCK 235 (239)
Q Consensus 228 ~~~~~~~~ 235 (239)
-+|+|||-
T Consensus 18 ~hwdf~~l 25 (28)
T PRK14751 18 YHWDFYAL 25 (28)
T ss_pred eeeeehhh
Confidence 47888874
No 231
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=30.07 E-value=25 Score=34.06 Aligned_cols=21 Identities=10% Similarity=-0.102 Sum_probs=17.4
Q ss_pred CcEEEEeCCCccccHHHHHHH
Q 041910 78 RFEVGIWSSAKERNVDTVLYC 98 (239)
Q Consensus 78 ~fevvIwTsa~~~ya~~il~~ 98 (239)
+=+.+|=||+.+.|++++++.
T Consensus 122 ~g~~vvVSASp~~~Vepfa~~ 142 (497)
T PLN02177 122 FGKRYIITASPRIMVEPFVKT 142 (497)
T ss_pred CCCEEEEECCcHHHHHHHHHH
Confidence 334689999999999999976
No 232
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=29.51 E-value=32 Score=28.45 Aligned_cols=64 Identities=16% Similarity=0.074 Sum_probs=34.8
Q ss_pred CcceEEEeCCCceeEeec-cCCCCCCCCCCCCCccccceEEEeCCChHHHHHHHH-hCcEEEEeCCCccccHHHHHHHH
Q 041910 23 KKKLLVLSPSRLLVHRAH-RANKATIPQNRMPDAINGGHLVFKRPFVEDFMKFCF-ERFEVGIWSSAKERNVDTVLYCA 99 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~~-~~~~~~~~~~~~~d~~~~~~~v~~RP~l~eFL~~l~-~~fevvIwTsa~~~ya~~il~~i 99 (239)
+=++|++|.||||-...- -.++.+. + -.+..|-|.- ++-+. .--+++|-|.-...-++.=++.|
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee---------~--KaFnv~DG~G--ik~l~~~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEE---------I--KAFNVRDGHG--IKLLLKSGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCce---------e--eeeeccCcHH--HHHHHHcCCeEEEEeCCCCHHHHHHHHHc
Confidence 457899999999975431 1111100 0 1233454443 22222 34788888887666665544444
No 233
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=28.15 E-value=16 Score=31.81 Aligned_cols=16 Identities=19% Similarity=0.277 Sum_probs=13.3
Q ss_pred ceEEEeCCCceeEeec
Q 041910 25 KLLVLSPSRLLVHRAH 40 (239)
Q Consensus 25 ~lLVLDLDeTLv~~~~ 40 (239)
.++|+|-|+||+....
T Consensus 1 ~LvvfDFD~TIvd~ds 16 (234)
T PF06888_consen 1 ILVVFDFDHTIVDQDS 16 (234)
T ss_pred CEEEEeCCCCccCCcc
Confidence 3789999999997753
No 234
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=27.99 E-value=36 Score=24.60 Aligned_cols=23 Identities=30% Similarity=0.241 Sum_probs=17.6
Q ss_pred cccCCCCcceEEEeCCCceeEee
Q 041910 17 KLNLGPKKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 17 ~l~~~~~k~lLVLDLDeTLv~~~ 39 (239)
++........|||+-|||.|...
T Consensus 33 ~l~~~~~~~~lvL~eDGT~VddE 55 (78)
T PF02017_consen 33 KLQLPEEPVRLVLEEDGTEVDDE 55 (78)
T ss_dssp HHT-SSSTCEEEETTTTCBESSC
T ss_pred HhCCCCcCcEEEEeCCCcEEccH
Confidence 34555578889999999999854
No 235
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=27.50 E-value=1.2e+02 Score=22.00 Aligned_cols=17 Identities=24% Similarity=0.239 Sum_probs=14.7
Q ss_pred CcceEEEeCCCceeEee
Q 041910 23 KKKLLVLSPSRLLVHRA 39 (239)
Q Consensus 23 ~k~lLVLDLDeTLv~~~ 39 (239)
...+|||+=|||.|...
T Consensus 41 ~~~~lvL~eDGT~VddE 57 (80)
T cd06536 41 APITLVLAEDGTIVEDE 57 (80)
T ss_pred CceEEEEecCCcEEccH
Confidence 46899999999999764
No 236
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=26.44 E-value=1.5e+02 Score=28.84 Aligned_cols=40 Identities=8% Similarity=-0.056 Sum_probs=35.9
Q ss_pred EEeCCChHHHHHHHHh-C-cEEEEeCCCccccHHHHHHHHhc
Q 041910 62 VFKRPFVEDFMKFCFE-R-FEVGIWSSAKERNVDTVLYCAMG 101 (239)
Q Consensus 62 v~~RP~l~eFL~~l~~-~-fevvIwTsa~~~ya~~il~~id~ 101 (239)
-..||++.+.|+++.+ . +.++|-|...+.+|+.+++.+.-
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3589999999999976 5 89999999999999999999864
No 237
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=26.23 E-value=92 Score=23.53 Aligned_cols=34 Identities=24% Similarity=0.519 Sum_probs=29.5
Q ss_pred chHHHHHHhhccCCCHHHHHHhCCCCCCCCCCCC
Q 041910 194 GELAKYLEGLAEAEDVQSYVKENAFGQPPVNSSH 227 (239)
Q Consensus 194 ~~L~~~L~~L~~~~DVr~~l~~~~f~~~~i~~~~ 227 (239)
+.|..+.+.+...+.|+.++...++....|++.+
T Consensus 91 P~l~~~~~rv~~~p~v~~~~~~~~~~~~~~~~~~ 124 (126)
T cd03210 91 PLLKAFVERLSARPKLKAYLESDAFKNRPINGNG 124 (126)
T ss_pred hHHHHHHHHHHhCcHHHHHHhCcCCCCCCCCCCC
Confidence 3899999999999999999999988777776655
No 238
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=25.83 E-value=98 Score=26.74 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=59.5
Q ss_pred EEEeCCChHHHHHHHHhC-cEEEEeCCCccccHHHHHHHHhcCCCCcEEEEeeCCcccccCCccccCCCCC---ceEeec
Q 041910 61 LVFKRPFVEDFMKFCFER-FEVGIWSSAKERNVDTVLYCAMGKLKDKLLFVWDQEECTDSGFKSLEKKDKP---LFFKDL 136 (239)
Q Consensus 61 ~v~~RP~l~eFL~~l~~~-fevvIwTsa~~~ya~~il~~id~~~~~~~~~v~~r~~C~~~~~~~~e~~~k~---~~~KDL 136 (239)
.+..=||+..+++.|..+ -.+.+||++.+.+++..++..-.-.. . +...-| .++.. ...+ |+ .|.+-.
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~----f~~~v~-~d~~~-v~~g-KP~Pdi~l~A~ 161 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-N----FSHVVL-GDDPE-VKNG-KPDPDIYLKAA 161 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-h----cCCCee-cCCcc-ccCC-CCCchHHHHHH
Confidence 456778999999999986 78999999999999998887652110 1 122223 11100 0001 22 467777
Q ss_pred chhhcccccCCCCCCCCCCEEEEECCchhhcc
Q 041910 137 NKLWQKINTSNKYHFNESDTLLIDDNPYKALL 168 (239)
Q Consensus 137 ~~l~~~~~~~~~~~~dl~~tViIDDsp~~~~~ 168 (239)
+++ +... .++++..+|+|.-...
T Consensus 162 ~~l--------~~~~-~~k~lVfeds~~Gv~a 184 (222)
T KOG2914|consen 162 KRL--------GVPP-PSKCLVFEDSPVGVQA 184 (222)
T ss_pred Hhc--------CCCC-ccceEEECCCHHHHHH
Confidence 777 3222 5999999999986644
No 239
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=22.60 E-value=54 Score=31.83 Aligned_cols=21 Identities=5% Similarity=-0.088 Sum_probs=18.3
Q ss_pred EEEEeCCCccccHHHHHHHHh
Q 041910 80 EVGIWSSAKERNVDTVLYCAM 100 (239)
Q Consensus 80 evvIwTsa~~~ya~~il~~id 100 (239)
.++|-|++-+-++++.++.-.
T Consensus 110 ~~vVVTAsPrvmVEpFake~L 130 (498)
T PLN02499 110 KRVVVTRMPRVMVERFAKEHL 130 (498)
T ss_pred eEEEEeCCHHHHHHHHHHHhc
Confidence 899999999999999999833
No 240
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=22.38 E-value=76 Score=22.89 Aligned_cols=20 Identities=25% Similarity=0.047 Sum_probs=15.5
Q ss_pred cccCCCCcceEEEeCCCcee
Q 041910 17 KLNLGPKKKLLVLSPSRLLV 36 (239)
Q Consensus 17 ~l~~~~~k~lLVLDLDeTLv 36 (239)
++.......+|||+-|||.|
T Consensus 33 ~l~l~~~~~~l~L~eDGTeV 52 (77)
T cd06535 33 LLQLPCAGSRLCLYEDGTEV 52 (77)
T ss_pred HhCCCCCCcEEEEecCCcEe
Confidence 34445556789999999999
Done!