BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041916
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P4X3|UTP7_SCHPO Probable U3 small nucleolar RNA-associated protein 7
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp7 PE=3 SV=1
Length = 520
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 199/335 (59%), Gaps = 16/335 (4%)
Query: 1 YPYIYNRDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGL 60
Y Y+Y+ GTE+HCLK H V L FL H LL SI G L+YQDV+ G++V RTG+
Sbjct: 164 YVYVYDNMGTEIHCLKRHIEVNALDFLPYHLLLTSIGNAGYLKYQDVSTGQLVAEHRTGM 223
Query: 61 GRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATS 120
G + V+ NP N V +GH+ G VT+W P++ PL+KML H+GPV LA + +G M T+
Sbjct: 224 GASHVLHQNPHNAVEHVGHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTA 283
Query: 121 GKECKIKIWDLRKYEVLQTL--PGHAKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRY 178
G + +K+WDLR Y+ L + P A+ L S +GLLAVG G I D + Y
Sbjct: 284 GADSLLKVWDLRTYKELHSYYTPTPAQRLTLSDRGLLAVGWGPHATIWKDALRTKQNFPY 343
Query: 179 MGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRRE 238
M H ++ + + + PYED+LGIGH+ G+ SI+VPGSGEPN+DS+ +PF + KQR+E
Sbjct: 344 MNH-LLPSSSVVDLHYCPYEDILGIGHAKGFESIIVPGSGEPNYDSYENDPFASRKQRQE 402
Query: 239 KEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREAEMEAAVEAVKGFVWKNKTK 298
EVR LL+KL PE I LN IG V ++ R+AE E + +V K K +
Sbjct: 403 TEVRQLLEKLRPEMISLNADFIGNV------DRAAPSLRKAEAEEEKPPEEKWVPKAKAR 456
Query: 299 GRNKPSKKAKKKQELVAKAKRPFLDQ-QLKGEQSL 332
G+N ++ +K R +DQ +LK E+SL
Sbjct: 457 GKNSALRRYLRKH------ARNVVDQRRLKVEKSL 485
>sp|Q9Z0H1|WDR46_MOUSE WD repeat-containing protein 46 OS=Mus musculus GN=Wdr46 PE=2 SV=1
Length = 622
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 199/331 (60%), Gaps = 10/331 (3%)
Query: 3 YIYNRDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGR 62
YIY+ G ELHC++ V +L+FL HFLLA+ ++ G L Y DV++G+IV GR
Sbjct: 259 YIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATTSETGFLTYLDVSVGKIVTALNVRAGR 318
Query: 63 TDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGK 122
VM NP+N V+ LGHS GTV++W P PL K+LCH+G V A+A G MATSG
Sbjct: 319 LSVMAQNPYNAVIHLGHSNGTVSLWSPAVKEPLAKILCHRGGVRAVAVDSTGTYMATSGL 378
Query: 123 ECKIKIWDLR-KYEVL--QTLPGHAKTLDFSQKGLLAVGTGSFVQIL---GDFSGSHNYS 176
+ ++KI+DLR ++ L +TLP A L FSQ+GLL G G V I G S
Sbjct: 379 DHQLKIFDLRGTFQPLSSRTLPQGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPPSLEQ 438
Query: 177 RYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQR 236
Y+ H + G+ G + F P+EDVLG+GHS G++S+LVPG+ EPNFD NP+ + KQR
Sbjct: 439 PYLTHRL-SGHVHG-LQFCPFEDVLGVGHSGGFTSMLVPGAAEPNFDGLENNPYRSRKQR 496
Query: 237 REKEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREAEMEAAVEAVKGFVWKNK 296
+E EV++LL+K+P E I LNP + V +++ K+ER + +A F K K
Sbjct: 497 QEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQ--KKERIERLGYDPDAKAAFQPKAK 554
Query: 297 TKGRNKPSKKAKKKQELVAKAKRPFLDQQLK 327
KGR+ + K+K++++ + R + Q L+
Sbjct: 555 QKGRSSTASLVKRKKKVMDQEHRDKVRQSLE 585
>sp|P40055|UTP7_YEAST U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP7 PE=1
SV=1
Length = 554
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 176/281 (62%), Gaps = 19/281 (6%)
Query: 1 YPYIYNRDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGL 60
Y +IY+ +GTELH LK+H L FL H+LL + + G L+Y DV+ G++V RT
Sbjct: 173 YTFIYDHEGTELHRLKQHIEARHLDFLPYHYLLVTAGETGWLKYHDVSTGQLVSELRTKA 232
Query: 61 GRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATS 120
G T M NP+N V+ LGHS GTV++W P+ PL+K+L +GPV+++A +G+ MAT+
Sbjct: 233 GPTMAMAQNPWNAVMHLGHSNGTVSLWSPSMPEPLVKLLSARGPVNSIAIDRSGYYMATT 292
Query: 121 GKECKIKIWDLRKYEVL---QTLPGHAKTLDFSQKGLLAVGTGSFVQILGD---FSGS-- 172
G + +KIWD+R ++ L ++LP + S GLLA+ G V + D SG
Sbjct: 293 GADRSMKIWDIRNFKQLHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKDALKLSGDSK 352
Query: 173 ----------HNYSRYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNF 222
H + YM H + G ++ + F P+ED+LG+GH G ++++VPG+GE N+
Sbjct: 353 PCFGSMGGNPHRNTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANY 411
Query: 223 DSWVANPFETSKQRREKEVRSLLDKLPPETIMLNPSKIGTV 263
D+ NPFET KQR+E+EVR+LL+KLP +TI L+P+ IG+V
Sbjct: 412 DALELNPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSV 452
>sp|O15213|WDR46_HUMAN WD repeat-containing protein 46 OS=Homo sapiens GN=WDR46 PE=1 SV=3
Length = 610
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 199/334 (59%), Gaps = 16/334 (4%)
Query: 3 YIYNRDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGR 62
+IY+ G ELHC++ V +L+FL HFLLA+ ++ G L Y DV++G+IV GR
Sbjct: 260 HIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGR 319
Query: 63 TDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGK 122
DVM NP+N V+ LGHS GTV++W P PL K+LCH+G V A+A G MATSG
Sbjct: 320 LDVMSQNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGL 379
Query: 123 ECKIKIWDLR-KYEVL--QTLPGHAKTLDFSQKGLLAVGTGSFVQIL---GDFSGSHNYS 176
+ ++KI+DLR Y+ L +TLP A L FSQ+GLL G G V I G S
Sbjct: 380 DHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAGQGKASPPSLEQ 439
Query: 177 RYMGHSM---VKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETS 233
Y+ H + V G Q F P+EDVLG+GH+ G +S+LVPG+GEPNFD +NP+ +
Sbjct: 440 PYLTHRLSGPVHGLQ-----FCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPYRSR 494
Query: 234 KQRREKEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREAEMEAAVEAVKGFVW 293
KQR+E EV++LL+K+P E I L+P + V ++ K+E+ + +A F
Sbjct: 495 KQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQ--GKKEQIERLGYDPQAKAPFQP 552
Query: 294 KNKTKGRNKPSKKAKKKQELVAKAKRPFLDQQLK 327
K K KGR+ + K+K++++ + R + Q L+
Sbjct: 553 KPKQKGRSSTASLVKRKRKVMDEEHRDKVRQSLQ 586
>sp|Q5TJE7|WDR46_CANFA WD repeat-containing protein 46 OS=Canis familiaris GN=WDR46 PE=3
SV=1
Length = 612
Score = 235 bits (600), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 199/331 (60%), Gaps = 10/331 (3%)
Query: 3 YIYNRDGTELHCLKEHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGR 62
+IY+ G ELHC++ V +L+FL HFLLA+ ++ G L Y DV++G+IV GR
Sbjct: 261 HIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGR 320
Query: 63 TDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGK 122
DVM NP+N V+ LGHS GTV++W P PL K+LCH+G V A+A G MATSG
Sbjct: 321 LDVMTKNPYNAVIHLGHSNGTVSLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGL 380
Query: 123 ECKIKIWDLR-KYEVL--QTLPGHAKTLDFSQKGLLAVGTGSFVQIL---GDFSGSHNYS 176
+ ++KI+DLR ++ L +TLP A L FSQ+GLLA G V I G S
Sbjct: 381 DHQLKIFDLRGMFQPLSARTLPQGAGHLAFSQRGLLAAGMSDVVNIWMGQGMASPPSLEQ 440
Query: 177 RYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQR 236
Y+ H + G+ G + F P+EDVLG+GHS G +S+LVPG+ EPNFD NP+ + KQR
Sbjct: 441 PYLTHRL-SGHVHG-LHFCPFEDVLGLGHSGGITSMLVPGAAEPNFDGLENNPYRSQKQR 498
Query: 237 REKEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQEREAEMEAAVEAVKGFVWKNK 296
+E EV++LL+K+P E I L+P + V +++ K+ER + EA F K K
Sbjct: 499 QEWEVKALLEKVPAELICLDPRALAEVDVISLEQE--KKERIERLGYDPEAKAPFQPKPK 556
Query: 297 TKGRNKPSKKAKKKQELVAKAKRPFLDQQLK 327
KGR+ + K++++++ K R + Q L+
Sbjct: 557 QKGRSSTASLVKRRRKVMDKEHRDKVRQSLE 587
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S ++ ++ D T + V NF +G + + NP ++ S TV +W
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---TLD 148
L H G V+ ++FHP+G+ + T+ + +KI DL + ++ TL GH T+
Sbjct: 218 NKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS+ G L G+ Q+L
Sbjct: 278 FSKGGELFASGGADTQVL 295
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 60 LGRTDVM---RVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHL 116
+G DV+ + +P +++ TV +W P + H PV ++ F +G
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 117 MATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTG----------SFV 163
+AT+ ++ IK+W + + L +L H + FS G L V +
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 164 QILGDFSGSHNYSRYM 179
Q + +FS S ++ ++
Sbjct: 177 QCVNNFSDSVGFANFV 192
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 14/201 (6%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG---VVS 76
V +QF + LLAS ++ +R + + + G F T +R F+ ++
Sbjct: 62 VVTSVQFSPHGNLLASASRDRTVR---LWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLA 118
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEV 136
++ +W L + H V F P+G L+ + ++ IKIWD +
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 137 LQTLP---GHAKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYSRYMGHSMVKGYQIGKV 192
+ G A +DF+ G GS + + D ++ + H V + +
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV----RVNKLLQHYQVHSGGVNCI 234
Query: 193 SFRPYEDVLGIGHSMGWSSIL 213
SF P + L S G IL
Sbjct: 235 SFHPSGNYLITASSDGTLKIL 255
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 44/97 (45%)
Query: 33 LASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTA 92
+AS ++ DV + +++ +++ G + + +P + S GT+ +
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 260
Query: 93 APLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
+ + H GPV ++F G L A+ G + ++ +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 86 MWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW--DLR-KYEVLQTLPG 142
+W A + + H+ V+++ F P+G+L+A++ ++ +++W D R K+ +
Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 103
Query: 143 HAKTLDFSQKG 153
+++DFS G
Sbjct: 104 PVRSVDFSADG 114
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S ++ ++ D T + V NF +G + + NP ++ S TV +W
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---TLD 148
L H G V+ ++FHP+ + + T+ + +KI DL + ++ TL GH T+
Sbjct: 218 NKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS+ G L G+ Q+L
Sbjct: 278 FSKGGELFASGGADTQVL 295
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 60 LGRTDVM---RVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHL 116
+G DV+ + +P +++ TV +W P + H PV ++ F +G
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 116
Query: 117 MATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTG----------SFV 163
+AT+ ++ IK+W + + L +L H + FS G L V +
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 164 QILGDFSGSHNYSRYM 179
Q + +FS S ++ ++
Sbjct: 177 QCVNNFSDSVGFANFV 192
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 14/201 (6%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG---VVS 76
V +QF + LLAS ++ +R + + + G F T +R F+ ++
Sbjct: 62 VVTSVQFSPHGNLLASASRDRTVR---LWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLA 118
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEV 136
++ +W L + H V F P+G L+ + ++ IKIWD +
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 137 LQTLP---GHAKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYSRYMGHSMVKGYQIGKV 192
+ G A +DF+ G GS + + D ++ + H V + +
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV----RVNKLLQHYQVHSGGVNCI 234
Query: 193 SFRPYEDVLGIGHSMGWSSIL 213
SF P ++ L S G IL
Sbjct: 235 SFHPSDNYLVTASSDGTLKIL 255
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 45/97 (46%)
Query: 33 LASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTA 92
+AS ++ DV + +++ +++ G + + +P + + S GT+ +
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEG 260
Query: 93 APLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
+ + H GPV ++F G L A+ G + ++ +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 86 MWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW--DLR-KYEVLQTLPG 142
+W A + + H+ V+++ F P+G+L+A++ ++ +++W D R K+ +
Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 103
Query: 143 HAKTLDFSQKG 153
+++DFS G
Sbjct: 104 PVRSVDFSADG 114
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 9 GTELHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
G EL K H + V + F ++ +LAS + +R D++ G+ + F+ R +
Sbjct: 896 GKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVV 955
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P + +++ G S TV +W ++ L H G V ++AF+ +G ++AT + ++
Sbjct: 956 FSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVR 1015
Query: 128 IWDLRKYEVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSM 183
+WD+ + GH +++ FS G +LA G+ L D S + GH+
Sbjct: 1016 LWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS 1075
Query: 184 VKGYQIGKVSFRPYEDVLGIG 204
+ V F P +L G
Sbjct: 1076 C----VRSVVFSPDGAMLASG 1092
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 69 NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKI 128
NP ++ G S TV +W+ ++ L H V+++ F+P+G ++A+ + +++
Sbjct: 1209 NPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRL 1268
Query: 129 WDLRKYEVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMV 184
WD+ + L T GH ++ F+ G +LA G+G L + S S + GH+
Sbjct: 1269 WDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTS- 1327
Query: 185 KGYQIGKVSFRPYEDVLGIG 204
+ V+F P +L G
Sbjct: 1328 ---WVSSVTFSPDGTMLASG 1344
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 33 LASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTA 92
LAS + +R ++ + + F+ + + NP +++ G S TV +W +++
Sbjct: 1215 LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSS 1274
Query: 93 APLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDF 149
L H V+++AF+P+G ++A+ + +++W++ + L T GH ++ F
Sbjct: 1275 KCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTF 1334
Query: 150 SQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMG 208
S G +LA G+ L S ++GH+ +G V F P
Sbjct: 1335 SPDGTMLASGSDDQTVRLWSISSGECLYTFLGHT----NWVGSVIFSPD----------- 1379
Query: 209 WSSILVPGSGEPNFDSW 225
+IL GSG+ W
Sbjct: 1380 -GAILASGSGDQTVRLW 1395
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 12 LHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
LH + H + V + F + +LAS + +R ++ GE + F + +P
Sbjct: 1319 LHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP 1378
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWD 130
+++ G TV +W ++ L + H V ++ F P+G L+A+ + +++W+
Sbjct: 1379 DGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWN 1438
Query: 131 LRKYEVLQTLPGH---AKTLDFSQKGLLAVGTGS 161
+ E L TL GH +++ FS GL+ + +GS
Sbjct: 1439 ISSGECLYTLHGHINSVRSVAFSSDGLI-LASGS 1471
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
+LAS + +R D++ + + F+ + + NP +++ G TV +W+ ++
Sbjct: 1256 MLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISS 1315
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---TLD 148
+ L H VS++ F P+G ++A+ + +++W + E L T GH ++
Sbjct: 1316 SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVI 1375
Query: 149 FSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYEDVLGIG 204
FS G +LA G+G L S GH+ +G + F P +L G
Sbjct: 1376 FSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHN----NWVGSIVFSPDGTLLASG 1428
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 56 FRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGH 115
F LG + +P + + G SGG V W+ T L+ H V+++ F +G
Sbjct: 860 FTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGK 919
Query: 116 LMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGL-LAVGTGSFVQILGDFSG 171
++A+ + +++WD+ + L+T GH +++ FS L LA G+ L D S
Sbjct: 920 MLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISS 979
Query: 172 SHNYSRYMGHS 182
+ GH+
Sbjct: 980 GECLYIFQGHT 990
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 9 GTELHCLKEH-GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
G L+ + H G V + F + +LA+ + +R D++ + F+ G T +R
Sbjct: 980 GECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQ---GHTSCVR 1036
Query: 68 VNPFN---GVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKEC 124
F+ +++ G TV +W ++ L + H V ++ F P+G ++A+ G +
Sbjct: 1037 SVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQ 1096
Query: 125 KIKIWDLRKYEVLQTLPGH---AKTLDFSQKGL-LAVGTGSFVQILGDFSGSHNYSRYMG 180
+++WD+ L TL G+ + L FS G+ LA G+ + L D S G
Sbjct: 1097 IVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQG 1156
Query: 181 HSMVKGYQIGKVSFRPYEDVLGIG 204
H+ + V+F P L G
Sbjct: 1157 HT----NWVNAVAFSPDGATLASG 1176
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 9 GTELHCLKEHGAVLK-LQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
G L+ L+ + + ++ L F N LA+ + +R D++ + + + + +
Sbjct: 1106 GNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVA 1165
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P ++ G TV +W +++ L + H V+++ F+P+G +A+ + ++
Sbjct: 1166 FSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVR 1225
Query: 128 IWDLRKYEVLQTLPGHAKTLD---FSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSM 183
+W++ + L T GH ++ F+ G +LA G+ L D S S + GH+
Sbjct: 1226 LWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHT- 1284
Query: 184 VKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSW 225
+ V+F P S+L GSG+ W
Sbjct: 1285 ---NWVNSVAFNPD------------GSMLASGSGDQTVRLW 1311
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 69 NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKI 128
+P +++ G TV +W ++ L + H V ++AF +G ++A+ + IK+
Sbjct: 1419 SPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKL 1478
Query: 129 WDLRKYEVLQTL 140
WD++ E ++TL
Sbjct: 1479 WDVKTGECIKTL 1490
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 9 GTELHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
G ELH L+ H V + F + LLAS + +R DV E F +
Sbjct: 491 GDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIA 550
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P +V+ G GT +W T + H V A+AF P+G ++A+ ++ I+
Sbjct: 551 FSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIR 610
Query: 128 IWDL---RKYEVLQTLPGHAKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSM 183
+WD+ ++ +VLQ + +L FS G +L G+ S V L D + + GH+
Sbjct: 611 LWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVH-LWDVASGEALHTFEGHT- 668
Query: 184 VKGYQIGKVSFRPYEDVLGIG 204
+ V+F P +L G
Sbjct: 669 ---DWVRAVAFSPDGALLASG 686
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 9 GTELHCLKEH-GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GTE LK H V + F + ++AS ++ G +R DV G+ DV++
Sbjct: 575 GTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGK----------ERDVLQ 624
Query: 68 VNPFNGVVSLGHS----------GGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLM 117
P VVSL S TV +W + L H V A+AF P+G L+
Sbjct: 625 A-PAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALL 683
Query: 118 ATSGKECKIKIWDLRKYEVLQTLPGHAKTL 147
A+ + I++WD+ E TL GH + +
Sbjct: 684 ASGSDDRTIRLWDVAAQEEHTTLEGHTEPV 713
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 46 DVTMGEIVGNFRTGLGRTDVMRV---NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQ 102
DV GE + F G TD +R +P +++ G T+ +W + H
Sbjct: 654 DVASGEALHTFE---GHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHT 710
Query: 103 GPVSALAFHPNGHLMATSGKECKIKIWDL 131
PV ++AFHP G +A++ ++ I+IW +
Sbjct: 711 EPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 84 VTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
+ +W + L + H V A+AF P+G L+A+ + +++WD+ E GH
Sbjct: 483 IHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGH 542
Query: 144 AK-TLD--FSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ--IGKVSFRPY 197
LD FS G ++A G+ L N + H+++KG+ + V+F P
Sbjct: 543 THYVLDIAFSPDGSMVASGSRDGTARL------WNVATGTEHAVLKGHTDYVYAVAFSPD 596
Query: 198 EDVLGIGHSMG 208
++ G G
Sbjct: 597 GSMVASGSRDG 607
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 97 KMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKG 153
++L A+AF P G L+A + I +WD+ + L TL GH + + FS G
Sbjct: 454 RILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDG 513
Query: 154 -LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMG 208
LLA G+ L D + + + + GH+ + + ++F P ++ G G
Sbjct: 514 ALLASGSDDATVRLWDVAAAEERAVFEGHT----HYVLDIAFSPDGSMVASGSRDG 565
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 15 LKEHGAVLKL-QFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG 73
L+EH ++ +F + L+ S++ ++ D + +++ F G + + +P +
Sbjct: 140 LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSST 199
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
++ S TV +W T L H V+AL+FHP+G+ + T+ + +KI DL +
Sbjct: 200 CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLE 259
Query: 134 YEVLQTLPGH---AKTLDFSQKGLLAVGTGSFVQIL---GDFSGSHNYSRYM 179
+L TL GH A + FS+ G GS Q++ +F S +YSR +
Sbjct: 260 GRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNF-DSVDYSRVL 310
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPG 142
TV +W P+ + H G V ++ F +G + T+ + IK+W + + +++ TL
Sbjct: 83 TVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLRE 142
Query: 143 H---AKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYSRYMGHSMVK--GYQIGKVSFRP 196
H + FS G L V + L D S SR + H+ + GY V F P
Sbjct: 143 HNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS-----SRQLIHTFCEPGGYS-SYVDFHP 196
Query: 197 YEDVLGIGHS 206
+ S
Sbjct: 197 SSTCIATASS 206
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 55 NFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNG 114
NF+ + +P ++ G +V +W + + H+ V+ + F P+
Sbjct: 13 NFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSA 72
Query: 115 HLMATSGKECKIKIW 129
HL+A+S ++ +++W
Sbjct: 73 HLLASSSRDKTVRLW 87
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 87 WKPTTAAPLIKMLC-HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK 145
W P AP +L H+ P++++AFHP ++A++ ++ +KIWD E +TL GH K
Sbjct: 94 WLPR--APAAHVLTGHRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTK 151
Query: 146 ---TLDFSQKGLLAVGTGS--FVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYEDV 200
LDF KG L V S F++I + N ++GH + + V F P + +
Sbjct: 152 PVNDLDFDHKGHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHD----HAVSAVRFMPGDQL 207
Query: 201 L 201
+
Sbjct: 208 I 208
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRV---NPFNGVVS 76
AV ++F+ L+ S ++ +R DV V RT G ++ +R + +++
Sbjct: 195 AVSAVRFMPGDQLIVSASRDRTIRVFDVASTHQV---RTLSGHSEWVRCVIPSADGTMLA 251
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHP--------------------NGHL 116
G TV +W P T P ++ H+ V A+AF P +G
Sbjct: 252 SGSKDQTVRLWDPLTGEPKSELRGHENDVEAVAFAPISAYAAIRELAGIPNDRTKRHGLF 311
Query: 117 MATSGKECKIKIWDLRKYEVLQTLPGH 143
+A+ ++ +K+WD + ++++ L GH
Sbjct: 312 LASGARDKTVKLWDTQTGQMIRNLAGH 338
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G TV +W T + + H V ALAFHP+G + +S + +++W+L L
Sbjct: 315 GARDKTVKLWDTQTGQMIRNLAGHDNWVRALAFHPSGKYLLSSSDDKTVRVWELSTGRCL 374
Query: 138 QTLPGHA 144
+ + H+
Sbjct: 375 RIVEAHS 381
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 13 HCLKEHGAVL-KLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPF 71
H L H A L + F + +LAS ++ ++ D GE + + + +
Sbjct: 102 HVLTGHRAPLTSIAFHPQYSILASASEDTTVKIWDWETGEFERTLKGHTKPVNDLDFDHK 161
Query: 72 NGVVSLGHSGGTVTMWKPTTAAPLIKMLC-HQGPVSALAFHPNGHLMATSGKECKIKIWD 130
++ S + +W K H VSA+ F P L+ ++ ++ I+++D
Sbjct: 162 GHLLVTCSSDLFIKIWDSQNEWKNTKTFVGHDHAVSAVRFMPGDQLIVSASRDRTIRVFD 221
Query: 131 LRKYEVLQTLPGHAK 145
+ ++TL GH++
Sbjct: 222 VASTHQVRTLSGHSE 236
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 60 LGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMAT 119
L D ++ +P + ++ G + TV +W + H+GPV +LAF PNG +A+
Sbjct: 426 LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLAS 485
Query: 120 SGKECKIKIWDLRKYEVLQTLPGHAK---TLDFS-QKGLLAVGT 159
+G++ ++K+WDL + + L GH +L FS GL+A +
Sbjct: 486 AGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASAS 529
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 9/193 (4%)
Query: 9 GTELHCLKEH-GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GTE+ L+ H G V +FL + L S ++ +RY D+ ++ +
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 391
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
++P++ + G T +W PL H V + FHPN + +AT + ++
Sbjct: 392 ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 128 IWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYSRYMGHSM 183
+W ++ ++ GH +L FS G G ++ L D + Y GH+
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD 511
Query: 184 VKGYQIGKVSFRP 196
I ++F P
Sbjct: 512 ----NITSLTFSP 520
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
+R+N ++ G G++ +W A L ++ H+ + +L FHP G +A+ ++
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 126 IKIWDLRKYEVLQTLPGHA---KTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGH 181
IK+WD+R+ + GH+ + L FS G LA L D + S + GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 182 SMVKGYQIGKVSFRPYEDVLGIGHS 206
+ + V F P E +L G S
Sbjct: 189 T----GPVNVVEFHPNEYLLASGSS 209
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 12 LHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
L L H A + L F +AS ++ ++ D+ V +R +R +P
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP 157
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWD 130
++ TV +W T + + H GPV+ + FHPN +L+A+ + I+ WD
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Query: 131 LRKYEVLQTL---PGHAKTLDFSQKG-LLAVGTGSFVQILG 167
L K++V+ + PG +++ F+ G L G +++ G
Sbjct: 218 LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYG 258
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAF-HPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
T T WK L +++ H VS+L +G L+AT G +C++ +W + K + +L
Sbjct: 7 TKTAWK------LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 142 GHAKTLDF----SQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
GH ++ + + L+ G+ S + D + MGH I + F PY
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA----NICSLDFHPY 116
Query: 198 EDVLGIG 204
+ + G
Sbjct: 117 GEFVASG 123
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+++ G V +W ++ + H PV ++ + L+ + I++WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 134 YEVLQTLPGHAK---TLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHS 182
++L+TL GH +LDF G +A G+ L D RY GHS
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
+R+N ++ G G++ +W A L ++ H+ + +L FHP G +A+ ++
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 126 IKIWDLRKYEVLQTLPGHA---KTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGH 181
IK+WD+R+ + GH+ + L FS G LA L D + S + GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 182 SMVKGYQIGKVSFRPYEDVLGIGHS 206
+ + V F P E +L G S
Sbjct: 189 T----GPVNVVEFHPNEYLLASGSS 209
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 12 LHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
L L H A + L F +AS ++ ++ D+ V +R +R +P
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP 157
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWD 130
++ TV +W T + + H GPV+ + FHPN +L+A+ + I+ WD
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Query: 131 LRKYEVLQTL---PGHAKTLDFSQKG-LLAVGTGSFVQILG 167
L K++V+ + PG +++ F+ G L G +++ G
Sbjct: 218 LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYG 258
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAF-HPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
T T WK L +++ H VS+L +G L+AT G +C++ +W + K + +L
Sbjct: 7 TKTAWK------LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 142 GHAKTLDF----SQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
GH ++ + + L+ G+ S + D + MGH I + F PY
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA----NICSLDFHPY 116
Query: 198 EDVLGIG 204
+ + G
Sbjct: 117 GEFVASG 123
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+++ G V +W ++ + H PV ++ + L+ + I++WDL
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 134 YEVLQTLPGHAK---TLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHS 182
++L+TL GH +LDF G +A G+ L D RY GHS
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S ++ ++ D T + V NF +G + + +P ++ S V +W
Sbjct: 158 LIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRM 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---TLD 148
L H V+ L+FHP+G+ + T+ + +KI DL + ++ TL GH T+
Sbjct: 218 NRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVS 277
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS+ G L G+ Q+L
Sbjct: 278 FSKDGELFTSGGADAQVL 295
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 45/106 (42%)
Query: 24 LQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGT 83
+ F N +AS +R D+ M ++ +++ + + +P + S GT
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGT 251
Query: 84 VTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
V + + + H GPV ++F +G L + G + ++ +W
Sbjct: 252 VKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 60 LGRTDV---MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHL 116
+G DV ++ +P +++ TV +W + H PV ++ F +G
Sbjct: 57 VGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQF 116
Query: 117 MATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTG----------SFV 163
+ T+ ++ IK+W + + L +L H + FS G L V +
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Query: 164 QILGDFSGSHNYSRYMGHS 182
Q + +FS S ++ ++ S
Sbjct: 177 QCVNNFSDSVGFANFVDFS 195
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 86 MWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH-- 143
+W A + + H+ V++L F P G+L+A++ ++ +++W L + H
Sbjct: 44 LWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTA 103
Query: 144 -AKTLDFSQKGLLAV 157
+++DFS G V
Sbjct: 104 PVRSVDFSADGQFLV 118
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 12 LHCLKEHGAVLKL-QFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
L+ L EH ++ +F + L+AS + +R D+T + F G ++ + NP
Sbjct: 137 LYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNRLCINTFVDYKGHSNYVDFNP 196
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWD 130
V+ TV +W T L H V++L+FHP+G+ + T+ + +KI D
Sbjct: 197 MGTCVASAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILD 256
Query: 131 LRKYEVLQTLPGH---AKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGY 187
L + ++ TL GH ++ FS+ G + Q+L N+ +Y +VK
Sbjct: 257 LLEGRLIYTLHGHQGPVLSVAFSKSGDQFASGATDAQVL---VWKTNFDKYNIKEIVKLQ 313
Query: 188 Q 188
Q
Sbjct: 314 Q 314
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 22/205 (10%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGH 79
AV +QF + L+AS +K +R + I G T V+R F+ S GH
Sbjct: 62 AVTCVQFSPSGHLVASSSKDRTVR---LWAPNIKGESSVLKAHTAVVRCVNFS---SDGH 115
Query: 80 S------GGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+ ++ W L + H V F P+G L+A+ + ++IWD+
Sbjct: 116 TFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITN 175
Query: 134 YEVLQTL---PGHAKTLDFSQKG--LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ 188
+ T GH+ +DF+ G + + G S V++ + ++ + H V
Sbjct: 176 RLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVWDIRT-----NKLLQHYQVHNAG 230
Query: 189 IGKVSFRPYEDVLGIGHSMGWSSIL 213
+ +SF P + L + G IL
Sbjct: 231 VNSLSFHPSGNYLLTASNDGTVKIL 255
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 80 SGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLR---KYEV 136
+ V +W + K H+ V+ + F P+GHL+A+S K+ +++W + V
Sbjct: 38 ADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVASSSKDRTVRLWAPNIKGESSV 97
Query: 137 LQTLPGHAKTLDFSQKG 153
L+ + ++FS G
Sbjct: 98 LKAHTAVVRCVNFSSDG 114
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 101 HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---TLDFSQKGLLAV 157
H+ V+ + F P+G +A+S + + IW+ + PGH + + FS G L
Sbjct: 17 HKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVA 76
Query: 158 GTG 160
+
Sbjct: 77 SSS 79
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 60 LGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMAT 119
L D ++ +P + ++ G + TV +W + H+GPV +L+F PNG +A+
Sbjct: 426 LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLAS 485
Query: 120 SGKECKIKIWDLRKYEVLQTLPGHAK---TLDFS-QKGLLAVGT 159
+G++ ++K+WDL + + L GH +L FS GL+A +
Sbjct: 486 AGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASAS 529
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 9 GTELHCLKEH-GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRT---- 63
GTE+ L+ H G V +FL + L S ++ +RY D+ G+F +
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL------GSFTNTVLYQGHAY 385
Query: 64 ---DVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATS 120
DV ++PF+ + G T +W PL H V + FHPN + +AT
Sbjct: 386 PVWDV-DISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 121 GKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYS 176
+ +++W ++ ++ GH +L FS G G ++ L D + +
Sbjct: 445 STDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK 504
Query: 177 RYMGHSMVKGYQIGKVSFRP 196
GH+ I ++F P
Sbjct: 505 ELRGHTD----SITSLAFSP 520
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/48 (22%), Positives = 27/48 (56%)
Query: 86 MWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+W + ++ H +++LAF P+ L+A++ + +++WD+R
Sbjct: 494 LWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S ++ ++ D T + V NF +G + + NP ++ S V +W
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRM 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---TLD 148
L H V+ L+FHP G+ + T+ + +K+ DL + ++ TL GH T+
Sbjct: 218 NKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS 277
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS+ G L G+ Q+L
Sbjct: 278 FSKDGELLTSGGADAQVL 295
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 47/106 (44%)
Query: 24 LQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGT 83
+ F N +AS ++ D+ M +++ +++ + + +P + S GT
Sbjct: 192 VDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGT 251
Query: 84 VTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
V M + + H GPV ++F +G L+ + G + ++ IW
Sbjct: 252 VKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPG 142
T+ +W T + G + + F+PNG +A++G + +KIWD+R ++LQ
Sbjct: 167 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQV 226
Query: 143 HA---KTLDFSQKG--LLAVGTGSFVQILGDFSGSHNYSRYMGHS 182
H+ L F G L+ + V++L G Y+ GH+
Sbjct: 227 HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYT-LQGHT 270
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 60 LGRTDV---MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHL 116
+G DV ++ +P +++ TV +W + H PV ++ F +G L
Sbjct: 57 VGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQL 116
Query: 117 MATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTG----------SFV 163
+ T+ ++ IK+W + + L +L H + FS G L V +
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 164 QILGDFSGSHNYSRYM 179
Q + +FS S ++ ++
Sbjct: 177 QCVNNFSDSVGFANFV 192
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 84 VTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
+ +W A + + H+ V++L F P G+L+A++ ++ +++W L + H
Sbjct: 42 LMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAH 101
Query: 144 ---AKTLDFSQKGLLAV 157
+++DFS G L V
Sbjct: 102 TAPVRSVDFSADGQLLV 118
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLP- 141
++ +W L + H V F P+G L+ + ++ IKIWD + +
Sbjct: 125 SIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 142 --GHAKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYE 198
G A +DF+ G GS + + D ++ + H V + +SF P
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHAVKIWDI----RMNKLLQHYQVHSCGVNCLSFHPLG 240
Query: 199 DVLGIGHSMG 208
+ L S G
Sbjct: 241 NSLVTASSDG 250
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 30 HFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKP 89
+F+ S +K +L D V F L D ++ +P + V+ G S TV +W
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRV--FVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDN 563
Query: 90 TTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAK---T 146
T + M H+G VS+LAF G +A+ + I IWDL ++ TL H T
Sbjct: 564 MTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTT 623
Query: 147 LDFSQKGLLAVGTG 160
+ FS+ G + G
Sbjct: 624 ITFSRDGTVLAAAG 637
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 98 MLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHA 144
++ H GPV AF P +L+ + ++ I++W L + + T GH
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHV 492
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 82 GTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
T+ +W T + ++ H PV + F P+G+ + + ++W + L+
Sbjct: 472 STIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV 531
Query: 142 GHAKTLDFSQ 151
GH +D Q
Sbjct: 532 GHLSDVDCVQ 541
>sp|B7FNU7|LIS1_PHATC Lissencephaly-1 homolog OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=PHATRDRAFT_17300 PE=3 SV=1
Length = 439
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 65 VMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKEC 124
+RV+P VV G G+V +W + + + H V+ LAF P G +A+ +
Sbjct: 134 CVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPTGSHLASCSTDL 193
Query: 125 KIKIWDLRKYEVLQTLPGHAKTL 147
IK+WD + Y ++TL GH T+
Sbjct: 194 SIKLWDFQTYACIKTLRGHDHTI 216
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G TV +WK + A+ L+ + H V ++ HPNG+ + +S + I+++D++ L
Sbjct: 342 GSRDRTVRLWKVSEASCLMVLKAHDNWVRSVLIHPNGNYILSSSDDKSIRVFDIKNERCL 401
Query: 138 QTL 140
+TL
Sbjct: 402 RTL 404
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Query: 13 HCLKEHGAVLKLQFLRNHF-LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPF 71
H L+ H +V+ + F ++ S ++ G ++ D GE + + + + P
Sbjct: 123 HTLQGHSSVVTCVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPT 182
Query: 72 NGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHP-NGHLMATS--------GK 122
++ + ++ +W T A + + H +S++ F P G L+ T+ +
Sbjct: 183 GSHLASCSTDLSIKLWDFQTYACIKTLRGHDHTISSVVFLPFGGDLLTTTKCKRLLSASR 242
Query: 123 ECKIKIWDLRKYEVLQTLPGH 143
+C +K+WDL QT+ H
Sbjct: 243 DCTVKVWDLETGFCDQTIHDH 263
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 101 HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKT---LDFSQKGLLAV 157
H V+ + HP ++ + ++ +K+WD E ++TL GH T L F+ G
Sbjct: 128 HSSVVTCVRVHPVFTVVVSGSEDGSVKVWDHESGEYIRTLKGHTNTVNGLAFTPTGSHLA 187
Query: 158 GTGSFVQI-LGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
+ + I L DF GH + I V F P+
Sbjct: 188 SCSTDLSIKLWDFQTYACIKTLRGHD----HTISSVVFLPF 224
>sp|Q9AV81|PUB72_ORYSJ U-box domain-containing protein 72 OS=Oryza sativa subsp. japonica
GN=PUB72 PE=2 SV=1
Length = 527
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 12 LHCLKEHGA---VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRV 68
+H LK+H A + + + +F+ AS K + D+ G + G+
Sbjct: 301 IHTLKDHTAEVEAVTVHATQKYFVTAS--KDNTWCFYDIPSGSCLTQVGESSGQEGYTSA 358
Query: 69 N--PFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKI 126
+ P ++ G + V +W T + + K H GPV+A++F NG+ +AT+ + +
Sbjct: 359 SFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALD-GV 417
Query: 127 KIWDLRKYEVLQTL-------PGHAKTLDFSQKGLLAVG 158
K+WDLRK +T+ P ++ DFS LAVG
Sbjct: 418 KLWDLRKLRNFRTISPYDSDTPTNSVEFDFS-GSYLAVG 455
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S + ++ D T E V ++ G + +P ++ TV +W T
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLD 148
L H V+AL+FHP+G+ + T+ + +KI DL + +L TL GH A T+
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS+ G GS Q++
Sbjct: 279 FSRTGEYFASGGSDEQVM 296
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 12 LHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
+H EHG V + F + +A+ ++ DV ++ +++ + + +P
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP 239
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW- 129
+ S T+ + L + HQGP + +AF G A+ G + ++ +W
Sbjct: 240 SGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Query: 130 ---DLRKY-EVLQ 138
D+ Y EVL+
Sbjct: 300 SNFDIVDYGEVLR 312
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPG 142
TV +W L + H V F P+G L+ ++ + +K+WD E + +
Sbjct: 126 TVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 185
Query: 143 H---AKTLDFSQKG--LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
H +DF G + A G + V++ R + H + + +SF P
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNALSFHPS 240
Query: 198 EDVL 201
+ L
Sbjct: 241 GNYL 244
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 78 GHSGGTVTMW--KPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
G + +W KP T A + H+ V+ + F P+GHL+A+ ++ ++IW
Sbjct: 37 GSMDSCLMVWHMKPQTRA--YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+V+ G + GT+ +W A + + H+ ++ FHP G A+ + +KIWD+RK
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 134 YEVLQTLPGHAK---TLDFSQKG--LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ 188
+ T GH + L F+ G +++ G + V++ D + + + H Q
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW-DLTAGKLLTEFKSHE----GQ 187
Query: 189 IGKVSFRPYEDVLGIGHS 206
I + F P+E +L G +
Sbjct: 188 IQSLDFHPHEFLLATGSA 205
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Query: 15 LKEHGAVLKLQFLRNHFLLASINKFGQ----------LRYQDVTMGEIVGNFRTGLGRTD 64
L+E V L R++ + + FG+ L+ D+ + ++ +
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 65 VMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKEC 124
V+R P V G V +W T L + H+G + +L FHP+ L+AT +
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADR 207
Query: 125 KIKIWDLRKYEVL 137
+K WDL +E++
Sbjct: 208 TVKFWDLETFELI 220
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 84 VTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
V +W ++ + H + ++ F + L+A IK+WDL + ++++TL GH
Sbjct: 41 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Query: 144 AK---TLDF 149
++DF
Sbjct: 101 RSNCISVDF 109
>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1
PE=2 SV=1
Length = 391
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 16 KEHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVV 75
+++ V +F N L+A+ + +R DV GE V F + +P+ ++
Sbjct: 142 QQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNML 201
Query: 76 SLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYE 135
++ + ++ + + L + H PV+ +AFHP+GH + + + I+I DL +
Sbjct: 202 AVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGR 261
Query: 136 VLQTLPGHAKTLD---FSQKGLLAVGTGSFVQILGDFSGSHNY 175
+ TL GH ++ FS+ G GS Q+L S H Y
Sbjct: 262 PIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTY 304
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
+R P ++ + TV +W AA I+ H PV+ +A+ P G+L+A++G +
Sbjct: 24 LRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRT 83
Query: 126 IKIWDLRKYEVLQTLPGHAK---TLDFSQKGLL 155
+KIW+ + V H+K ++DF G L
Sbjct: 84 VKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHL 116
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 72 NGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDL 131
N V S GH TV +W+P + + H V ++ F GHLM T+ + KIW +
Sbjct: 73 NLVASAGHDR-TVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRV 131
Query: 132 RKYEVLQTLPGH---AKTLDFSQKGLLAVGTGS 161
+ + + + ++ FS G L V T S
Sbjct: 132 ARRQFVSSFAQQNNWVRSAKFSPNGKL-VATAS 163
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%)
Query: 61 GRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATS 120
G + +P ++ G G V W+ + L ++ H GPV F P+GHL A++
Sbjct: 22 GEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASA 81
Query: 121 GKECKIKIWDLRKYEVLQTLPGHAKTLD 148
+C +++WD+ + + L+ L GH ++++
Sbjct: 82 SCDCTVRLWDVARAKCLRVLKGHQRSVE 109
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 72 NGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDL 131
+G+++ G T+ +WKPTT++ LI++ H V ++AF P+ +A++G +K+WD
Sbjct: 203 SGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC 262
Query: 132 RKYEVLQTLPG---HAKTLDFSQKGLLAV 157
+ L+TL G A T F+ G + V
Sbjct: 263 NTGKCLETLKGVLDVAHTCAFTPDGKILV 291
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 50 GEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALA 109
G+++ G R +P + + TV +W A L + HQ V ++
Sbjct: 53 GQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVS 112
Query: 110 FHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKTL---DFSQKGLLAVGTGSF 162
F P+ +A+ G + ++ +WD++ ++L+ L GH ++ DFS + + TGS+
Sbjct: 113 FSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPT-VNCLATGSW 167
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
Query: 6 NRDGTELHCLKEH-GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTD 64
R G L L H G V +F + L AS + +R DV + + + +
Sbjct: 50 TRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVE 109
Query: 65 VMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKEC 124
+ +P + ++ G V +W + L ++ H+ + + F P + +AT +
Sbjct: 110 TVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDS 169
Query: 125 KIKIWDLRKYEVL---QTLPGHA---KTLDFSQKGLLAVGT 159
+ IWDLR Q L GH+ L +S GLLA G+
Sbjct: 170 TVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLASGS 210
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 101 HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKG-LLA 156
H G V++ AF P+G ++ T ++ + W+ R ++L L GH K FS G L A
Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79
Query: 157 VGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ--IGKVSFRPYEDVLGIGHSMGW 209
+ L D +R ++KG+Q + VSF P L G GW
Sbjct: 80 SASCDCTVRLWDV------ARAKCLRVLKGHQRSVETVSFSPDSRQLASG---GW 125
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 56 FRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGH 115
F L + R +P + V+ G + TV +W + H+GP+ +L F PNG
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Query: 116 LMATSGKECKIKIWDLRKYEVLQTLPGHAKT---LDFSQKG-LLAVGT 159
+AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 683 FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 730
Score = 39.7 bits (91), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 82 GTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
GTV +W T L+ H PV F P G+ + G + ++W Y+ L+
Sbjct: 565 GTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA 624
Query: 142 GHAKTLDFSQ----KGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
GH ++ ++ +A G+ L D + + GH KG I ++F P
Sbjct: 625 GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH---KG-PIHSLTFSPN 680
Query: 198 EDVLGIGHSMG 208
L G + G
Sbjct: 681 GRFLATGATDG 691
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
VS GH +W PL H V+ FHPN + +AT + +++WD+
Sbjct: 601 VSGGHDR-VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 135 EVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHS 182
++ GH +L FS G LA G +L D GH+
Sbjct: 660 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 91 TAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
TA+ L + H GPV +F P+ + + +S ++ +++W L+ + L GH
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 584
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 56 FRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGH 115
F L + R +P + V+ G + TV +W + H+GP+ +L F PNG
Sbjct: 624 FAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 683
Query: 116 LMATSGKECKIKIWDLRKYEVLQTLPGHAKT---LDFSQKG-LLAVGT 159
+AT + ++ +WD+ ++ L GH T L FS+ G +LA G+
Sbjct: 684 FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGS 731
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 82 GTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
GTV +W T L+ H PV F P G+ + G + ++W Y+ L+
Sbjct: 566 GTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA 625
Query: 142 GHAKTLDFSQ----KGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
GH ++ ++ +A G+ L D + + GH KG I ++F P
Sbjct: 626 GHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH---KG-PIHSLTFSPN 681
Query: 198 EDVLGIGHSMG 208
L G + G
Sbjct: 682 GRFLATGATDG 692
Score = 38.5 bits (88), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
VS GH +W PL H V+ +HPN + +AT + +++WD+
Sbjct: 602 VSGGHDR-VARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNG 660
Query: 135 EVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHS 182
++ GH +L FS G LA G +L D GH+
Sbjct: 661 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 91 TAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
TA+ L + H GPV +F P+ + + +S ++ +++W L+ + L GH
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 585
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S + ++ D T E + ++ G + +P ++ TV +W T
Sbjct: 159 LIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART 218
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLD 148
L H V+AL+FHP+G+ + T+ + +KI DL + +L TL GH A T+
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS+ G GS Q++
Sbjct: 279 FSRTGEYFASGGSDEQVM 296
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPG 142
TV +W L + H V F P+G L+ ++ + +K+WD E + +
Sbjct: 126 TVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE 185
Query: 143 H---AKTLDFSQKG--LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
H +DF G + A G + V++ + +H R + H + + +SF P
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWD--ARTH---RLLQHYQLHSAAVNALSFHPS 240
Query: 198 EDVL 201
+ L
Sbjct: 241 GNYL 244
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
G T+ +W + + H+ V+ + F P+GHL+A+ ++ ++IW
Sbjct: 37 GSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/119 (18%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 12 LHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
+H EHG V + F + +A+ ++ D ++ +++ + + +P
Sbjct: 180 IHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP 239
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
+ S T+ + L + HQGP + +AF G A+ G + ++ +W
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPG 142
T+ +W L + H V +AF P+G+ +A+S + IK+WD+ + + L+TL
Sbjct: 749 TIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKS 808
Query: 143 H---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYE 198
H +++ FS G LA G+G + ++ Y+GH+ + +++ P
Sbjct: 809 HTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHT----NSVYSIAYSPD- 863
Query: 199 DVLGIGHSMGWSSILVPGSGEPNFDSW 225
S ILV GSG+ W
Sbjct: 864 -----------SKILVSGSGDRTIKLW 879
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 22 LKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVM---RVNPFNGVVSLG 78
L + F + +LAS + ++ D G+ + + G TD + +P + ++
Sbjct: 940 LPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLE---GHTDFIYGIAFSPDSQTLASA 996
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +V +W +T +L H V A+ FHP G ++AT +C +K+W++ + L+
Sbjct: 997 STDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK 1056
Query: 139 TLPGHAKTL 147
TL H+ +
Sbjct: 1057 TLSEHSDKI 1065
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 19 GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLG 78
G +L F LLA+ + +R +V G+++ R + +P +++
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASC 702
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ V +W + + H+ V ++AFHP+G +A++ + IK+WD++ LQ
Sbjct: 703 GADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQ 762
Query: 139 TLPGH---AKTLDFSQKG 153
TL GH + + FS G
Sbjct: 763 TLTGHTDWVRCVAFSPDG 780
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 9 GTELHCLKEHG-AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
G L L EH +L + + + LLAS + +R D G VG R R
Sbjct: 1052 GQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAI 1111
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P +++ + TV +W L + H V +AF P+G ++A++ + ++
Sbjct: 1112 FSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVR 1171
Query: 128 IWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTGS 161
IWD+ + GH ++ FS G + V +GS
Sbjct: 1172 IWDVNTGKCHHICIGHTHLVSSVAFSPDGEV-VASGS 1207
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
M +P +++ + +V +W T + + H V + F PNG ++AT +
Sbjct: 1068 MAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQT 1127
Query: 126 IKIWDLRKYEVLQTLPGHAK---TLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGH 181
+KIWD ++ + L+TL GH + FS G +LA + + D + + +GH
Sbjct: 1128 VKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGH 1187
Query: 182 SMVKGYQIGKVSFRPYEDVLGIG 204
+ + + V+F P +V+ G
Sbjct: 1188 T----HLVSSVAFSPDGEVVASG 1206
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 7 RDGTELHCLKEHG-AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDV 65
RDG + L H V + F + LAS + ++ D+ G + +T G TD
Sbjct: 714 RDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCL---QTLTGHTDW 770
Query: 66 MRVNPFN---GVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGK 122
+R F+ ++ + T+ +W + L + H G V ++AF +G +A+
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSG 830
Query: 123 ECKIKIWDLRKYEVLQTLPGHAKTL 147
+ IKIW+ E L+T GH ++
Sbjct: 831 DRTIKIWNYHTGECLKTYIGHTNSV 855
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 33 LASINKFGQLRYQDVTMGEIVGNFRTGLGRTD---VMRVNPFNGVVSLGHSGGTVTMWKP 89
LAS + +R +++ G+ F+ L TD + +P +++ G + TV +W
Sbjct: 993 LASASTDSSVRLWNISTGQC---FQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNI 1049
Query: 90 TTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHA 144
+T L + H + +A+ P+G L+A++ + +++WD + L GH+
Sbjct: 1050 STGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHS 1104
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 7 RDGTELHCLKEHGAVLK-LQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDV 65
+DGT L L H ++ + F + LAS ++ DV+ G+ + ++ G
Sbjct: 756 QDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRS 815
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
+ + ++ G T+ +W T L + H V ++A+ P+ ++ + +
Sbjct: 816 VAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRT 875
Query: 126 IKIWDLRKYEVLQTLPGHAK---TLDFSQKG 153
IK+WD + + ++TL GH ++ FS G
Sbjct: 876 IKLWDCQTHICIKTLHGHTNEVCSVAFSPDG 906
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 9 GTELHCLKEH-GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDV-- 65
G L LK H G V + F + LAS + ++ + GE + +T +G T+
Sbjct: 800 GKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECL---KTYIGHTNSVY 856
Query: 66 -MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKEC 124
+ +P + ++ G T+ +W T + + H V ++AF P+G +A +
Sbjct: 857 SIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQ 916
Query: 125 KIKIWDLRKYEVLQTLPGH---AKTLDFS-QKGLLAVGTGSFVQILGDFSGSHNYSRYMG 180
+++W+ R + L+ G+ A + FS + +LA G+ L D+ S G
Sbjct: 917 SVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEG 976
Query: 181 HSMVKGYQIGKVSFRPYEDVLG 202
H+ I ++F P L
Sbjct: 977 HTDF----IYGIAFSPDSQTLA 994
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTL 140
TV +W T + H VS++AF P+G ++A+ ++ ++IW+++ E LQ L
Sbjct: 1169 TVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQIL 1226
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S + ++ D T E + +F G + + +P ++ + TV +W
Sbjct: 158 LIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRM 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLD 148
+ H G V++L+FHP+G+ + T+ + +K+ DL + +L TL GH ++
Sbjct: 218 NKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVK 277
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS++G GS Q++
Sbjct: 278 FSREGEFFASGGSDEQVM 295
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/119 (18%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 12 LHCLKEHGAVLK-LQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNP 70
+H EHG + + F + +A+ ++ D+ M +++ +++ G + + +P
Sbjct: 179 IHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHP 238
Query: 71 FNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIW 129
+ + T+ + L + HQGPV+++ F G A+ G + ++ +W
Sbjct: 239 SGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSREGEFFASGGSDEQVMVW 297
Score = 38.9 bits (89), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 69 NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKI 128
+P +++ TV +W P+ H G V +++F +G + T+ + IK+
Sbjct: 69 SPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKV 128
Query: 129 WDLRKYEVLQTLPGH---AKTLDFSQKGLLAVG 158
W + + + L +L H + FS G L V
Sbjct: 129 WTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVS 161
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 16/190 (8%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG---VVS 76
A+L + F + L+AS ++ +R + + + G T +R F+G +
Sbjct: 62 AILSVDFSPSGHLIASASRDKTVR---LWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLV 118
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEV 136
T+ +W L + H V F P+G L+ ++ + IK+WD E
Sbjct: 119 TASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSREC 178
Query: 137 LQTLPGHAKTLDF-----SQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGK 191
+ + H ++F S + A T + V++ D + Y HS V +
Sbjct: 179 IHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVW-DIRMNKLIQHYQVHSGV----VNS 233
Query: 192 VSFRPYEDVL 201
+SF P + L
Sbjct: 234 LSFHPSGNYL 243
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/61 (19%), Positives = 31/61 (50%)
Query: 69 NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKI 128
NP ++ G + +W + + H+ + ++ F P+GHL+A++ ++ +++
Sbjct: 27 NPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVRL 86
Query: 129 W 129
W
Sbjct: 87 W 87
>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop1 PE=1 SV=1
Length = 775
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 56 FRTGLGRTDVMR-VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNG 114
RT G TD +R V ++ GT+ +WK +T L + H G V ++ +P+
Sbjct: 570 IRTLRGHTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSR 629
Query: 115 HLMATSGKECKIKIWDLRKYEVLQTLPGHAKTLD---FSQKGLLAVG 158
++G + KI+IW+L E+LQTL GH+ + F+Q L++
Sbjct: 630 QQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSAS 676
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S + G LR + G + R +GR + +NP + + +W +
Sbjct: 589 LIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLES 648
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK---YEVLQTLPGH 143
L + H VS + F+ N + A++ + +++WDL ++L+ GH
Sbjct: 649 GELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTGSCRDILKCPLGH 703
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 22 LKLQFLRNHFLLASINKFGQLRYQDVTMGEI---VGNFRTGLGRTDVMRVNPFNGVVSLG 78
L L ++ L +S +++ + D+ G + V + +G T + +P + G
Sbjct: 313 LSLHATGDYLLSSSDDQY--WAFSDIQTGRVLTKVTDESSGCALT-CAQFHPDGLIFGTG 369
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +W + H GP++++AF NG+ +AT+ + +K+WDLRK + +
Sbjct: 370 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 429
Query: 139 TLP----GHAKTLDFSQKG-LLAVGTGSFVQI 165
TL K+L F Q G LA+G G+ VQI
Sbjct: 430 TLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 460
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G + V ++ ++ L + H V+++ FHP+ L+ ++ + I+IW + +
Sbjct: 241 GGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCV 300
Query: 138 QTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKV 192
Q + H ++ TG + GD+ S + +Y S + Q G+V
Sbjct: 301 QVVRAHEGSV-----------TGLSLHATGDYLLSSSDDQYWAFSDI---QTGRV 341
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
++ +PF + T +W AAPL + HQ V ++FHPN +AT +
Sbjct: 451 VQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHT 510
Query: 126 IKIWDLRKYEVLQTLPGH---AKTLDFSQKGL-LAVGTGSFVQILGDFSGSHNYSRYMGH 181
++WD+R ++ H L S GL LA S + + D S+ + ++ H
Sbjct: 511 TRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKH 570
Query: 182 SMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSW 225
S + + +SF Y++ ILV G + + + W
Sbjct: 571 SSI----VYSLSFS-YDN-----------KILVSGGADTDVNFW 598
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 4/148 (2%)
Query: 18 HGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVS 76
H A + +QF + A+ + R DV + F D + +P ++
Sbjct: 444 HNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLA 503
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEV 136
G S T MW T + H PVSAL +G +A++ + IK+WDLR
Sbjct: 504 TGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQ 563
Query: 137 LQTLPGHAK---TLDFSQKGLLAVGTGS 161
+ H+ +L FS + V G+
Sbjct: 564 HVSFVKHSSIVYSLSFSYDNKILVSGGA 591
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 52 IVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFH 111
++G+ R G + ++P + G +W T + ++K H P+ + F
Sbjct: 399 LIGHTRPVFG----VSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFS 454
Query: 112 PNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKTLD 148
P G+ AT+ + ++WD+ L+ GH +D
Sbjct: 455 PFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVD 491
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 87 WKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKT 146
W PT A + H+ P++ +AFHP L+A++ ++ +KIWD +TL GH +
Sbjct: 94 WLPTAPARYT-LTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTRE 152
Query: 147 ---LDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ--IGKVSFRPYEDVL 201
+DF KG S + I + + + Y G ++ +G++ + V F P +D++
Sbjct: 153 VWGVDFDSKGSFLATCSSDLSIKVWDTQQWDNAGYSGKTL-RGHEHTVSTVKFLPGDDLI 211
Query: 202 G 202
Sbjct: 212 A 212
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 26/149 (17%)
Query: 17 EHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVN-PFNGVV 75
EH V ++FL L+AS ++ +R +V + RT G D +R+ P
Sbjct: 196 EH-TVSTVKFLPGDDLIASASRDKTIRIWEVATTFCI---RTITGHEDWVRMTVPSTDGT 251
Query: 76 SLGH--SGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHP-------------------NG 114
LG S T +W PT+ ++ H V +AF P G
Sbjct: 252 LLGSCSSDNTARVWDPTSGVMKMEFRGHGHIVEVIAFAPLASYAAIRELAGLKAATKAPG 311
Query: 115 HLMATSGKECKIKIWDLRKYEVLQTLPGH 143
+AT ++ +KIWD+ + L+T+ GH
Sbjct: 312 AYIATGSRDKTVKIWDVHSGQELRTVSGH 340
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
++ G TV +W + L + H + L FHP+G + ++ + I++W+L
Sbjct: 314 IATGSRDKTVKIWDVHSGQELRTVSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTG 373
Query: 135 EVLQTLPGHA 144
+ + H+
Sbjct: 374 RCMXVVEAHS 383
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 101 HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
H+ VS + F P L+A++ ++ I+IW++ ++T+ GH
Sbjct: 195 HEHTVSTVKFLPGDDLIASASRDKTIRIWEVATTFCIRTITGH 237
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 62 RTDVMRV--NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMAT 119
R + RV +P +++ TV +W T + + H V + F G +AT
Sbjct: 108 RAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGVDFDSKGSFLAT 167
Query: 120 SGKECKIKIWDLRKYEVL----QTLPGHAKTL 147
+ IK+WD ++++ +TL GH T+
Sbjct: 168 CSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTV 199
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
++++ ++ G G++ +W A L +L H+ + +L FHP G +A+ +
Sbjct: 69 LQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTD 128
Query: 126 IKIWDLRKYEVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGH 181
IK+WD+R+ + H + L FS G LA L D + + GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 182 SMVKGYQIGKVSFRPYEDVLGIGHS 206
S + V F P E +L G S
Sbjct: 189 S----GPVNVVEFHPSEYLLASGSS 209
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 21 VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHS 80
+ L F +AS + ++ DV + +++ +R +P ++
Sbjct: 108 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 81 GGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTL 140
TV +W T + + H GPV+ + FHP+ +L+A+ + I+ WDL K+ V+ +
Sbjct: 168 DHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCI 227
Query: 141 PGHA---KTLDFSQKGLLAVG 158
A + + F+ G G
Sbjct: 228 EEEATPVRCILFNPDGCCLYG 248
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAF-HPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
T T WK L +++ H VS+L G L+AT G +C++ +W + K + +L
Sbjct: 7 TKTAWK------LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT 60
Query: 142 GHA---KTLDFSQK-GLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
GH ++L S K L+ G+ S + D + +GH I + F PY
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA----NICSLDFHPY 116
Query: 198 EDVLGIG 204
+ G
Sbjct: 117 GSFVASG 123
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+++ G V +W ++ + H P+ +L L+ + I++WDL
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 134 YEVLQTLPGHAK---TLDFSQKGLLAVGTGSF 162
++L+TL GH +LDF G V +GS
Sbjct: 95 AKILRTLLGHKANICSLDFHPYGSF-VASGSL 125
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 98 MLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKT---LDFSQK-G 153
+ H+ PV+ LAFHP L+A++ ++ +K+WD ++ +TL GH K +DF + G
Sbjct: 101 LASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGG 160
Query: 154 LLAVGTGSFVQILGDFSGSH-NYSRYMGHSMVKGYQIGKVSFRPYEDVL 201
L+A + L D + + N GH + + V F P + L
Sbjct: 161 LMATCSSDLTLKLWDTANQYTNVKTLHGHD----HSVSSVRFMPDGETL 205
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 13 HCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTD-VMRVN- 69
H L H A V +L F LLAS ++ ++ D G++ RT G T VM V+
Sbjct: 99 HTLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDME---RTLKGHTKAVMDVDF 155
Query: 70 -PFNGVVSLGHSGGTVTMWKPTTAAPLIKML-CHQGPVSALAFHPNGHLMATSGKECKIK 127
P G+++ S T+ +W +K L H VS++ F P+G + ++ ++ I+
Sbjct: 156 DPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIR 215
Query: 128 IWDLRKYEVLQTLPGHAKTLDF---SQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSM 183
+W + ++T GHA+ + S+ G L + + DFS GH
Sbjct: 216 VWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEH 275
Query: 184 V 184
V
Sbjct: 276 V 276
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
+ G T+ +W + L ++ H + AL FHP+G + ++ + IK+WDL
Sbjct: 314 AATGSRDKTIKLWDALSGQCLRTLVGHDNWIRALVFHPSGKYLLSASDDKTIKVWDLANG 373
Query: 135 EVLQTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFS 170
+T+ H+ + G +G ++ GD S
Sbjct: 374 RCTKTIEAHSHFVTSMTWGRAVGASGGIEKVNGDAS 409
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 98 MLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKT---LDFSQK-G 153
+ H+ PV+ LAFHP L+A++ ++ +K+WD ++ +TL GH K +DF + G
Sbjct: 101 LASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGG 160
Query: 154 LLAVGTGSFVQILGDFSGSH-NYSRYMGHSMVKGYQIGKVSFRPYEDVL 201
L+A + L D + + N GH + + V F P + L
Sbjct: 161 LMATCSSDLTLKLWDTANQYTNVKTLHGHD----HSVSSVRFMPDGETL 205
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 13 HCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTD-VMRVN- 69
H L H A V +L F LLAS ++ ++ D G++ RT G T VM V+
Sbjct: 99 HTLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDME---RTLKGHTKAVMDVDF 155
Query: 70 -PFNGVVSLGHSGGTVTMWKPTTAAPLIKML-CHQGPVSALAFHPNGHLMATSGKECKIK 127
P G+++ S T+ +W +K L H VS++ F P+G + ++ ++ I+
Sbjct: 156 DPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIR 215
Query: 128 IWDLRKYEVLQTLPGHAKTLDF---SQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSM 183
+W + ++T GHA+ + S+ G L + + DFS GH
Sbjct: 216 VWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEH 275
Query: 184 V 184
V
Sbjct: 276 V 276
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
+ G T+ +W + L ++ H + AL FHP+G + ++ + IK+WDL
Sbjct: 314 AATGSRDKTIKLWDALSGQCLRTLVGHDNWIRALVFHPSGKYLLSASDDKTIKVWDLANG 373
Query: 135 EVLQTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFS 170
+T+ H+ + G +G ++ GD S
Sbjct: 374 RCTKTIEAHSHFVTSMTWGRAVGASGGIEKVNGDAS 409
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+ S + ++ D T E + +F G + + +P ++ + TV +W
Sbjct: 158 LIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRM 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLD 148
+ H G V++L+FHP+G+ + T+ + +K+ DL + +L TL GH +
Sbjct: 218 NKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVK 277
Query: 149 FSQKGLLAVGTGSFVQIL 166
FS++G GS Q++
Sbjct: 278 FSREGDFFASGGSDEQVM 295
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 8 DGTELHCLK---EHGAVLK-LQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRT 63
D T C++ EHG + + F + +A+ ++ D+ M +++ +++ G
Sbjct: 172 DKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVV 231
Query: 64 DVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKE 123
+ + +P + + T+ + L + HQGPV+ + F G A+ G +
Sbjct: 232 NSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSD 291
Query: 124 CKIKIW----------DLRKYEVLQTLP 141
++ +W DL KY T P
Sbjct: 292 EQVMVWKTNFDAGSYPDLLKYRQNDTFP 319
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 69 NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKI 128
+P +++ TV +W P+ H G V +++F +G + T+ + IK+
Sbjct: 69 SPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKV 128
Query: 129 WDLRKYEVLQTLPGH---AKTLDFSQKGLLAV 157
W + + + L +L H + FS G L V
Sbjct: 129 WTVHRQKFLFSLNQHINWVRCAKFSPDGRLIV 160
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG---VVS 76
A+L + F + L+AS ++ +R + + + G T +R F+G +
Sbjct: 62 AILSVDFSPSGHLIASASRDKTVR---LWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLV 118
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEV 136
T+ +W L + H V F P+G L+ ++ + IK+WD E
Sbjct: 119 TASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSREC 178
Query: 137 LQTLPGHAKTLDF-----SQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGK 191
+Q+ H ++F S + A T + V++ D + Y HS V +
Sbjct: 179 IQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVW-DIRMNKLIQHYQVHSGV----VNS 233
Query: 192 VSFRPYEDVL 201
+SF P + L
Sbjct: 234 LSFHPSGNYL 243
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 61 GRTDVMRVNPFNG---VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLM 117
G D + FN ++ G + +W T + + H+ + ++ F P+GHL+
Sbjct: 16 GHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLI 75
Query: 118 ATSGKECKIKIW 129
A++ ++ +++W
Sbjct: 76 ASASRDKTVRLW 87
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 9 GTELHCLKEHG-AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GT L+ HG +V + F + +AS + G ++ D G G +
Sbjct: 1083 GTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVA 1142
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P V+ G GT+ +W + + H G V ++AF P+G +A+ + IK
Sbjct: 1143 FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIK 1202
Query: 128 IWDLRKYEVLQTLPGH---AKTLDFSQKG 153
IWD QTL GH +++ FS G
Sbjct: 1203 IWDTASGTCTQTLEGHGGWVQSVAFSPDG 1231
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 15 LKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG 73
L+ HG+ VL + F + +AS + ++ D G G + +P
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
V+ G T+ +W + + H G V ++AF P+G +A+ + IKIWD
Sbjct: 897 RVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAAS 956
Query: 134 YEVLQTLPGHAK---TLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQI 189
QTL GH ++ FS G +A G+G + D + GH G +
Sbjct: 957 GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGH----GGSV 1012
Query: 190 GKVSFRP 196
V+F P
Sbjct: 1013 WSVAFSP 1019
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 9 GTELHCLKEHG-AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GT L+ HG +V + F + +AS + ++ D G GR +
Sbjct: 873 GTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVA 932
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P V+ G T+ +W + + H V ++AF P+G +A+ + IK
Sbjct: 933 FSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIK 992
Query: 128 IWDLRKYEVLQTLPGHAKTL 147
IWD QTL GH ++
Sbjct: 993 IWDTASGTCTQTLEGHGGSV 1012
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 9 GTELHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GT L+ HG+ VL + F + +AS + ++ D G G +
Sbjct: 957 GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVA 1016
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P V+ G T+ +W + + H G V ++ F P+G +A+ + IK
Sbjct: 1017 FSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIK 1076
Query: 128 IWDLRKYEVLQTLPGHAKTL 147
IWD QTL GH ++
Sbjct: 1077 IWDAVSGTCTQTLEGHGDSV 1096
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 9 GTELHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GT L+ HG V + F + +AS + G ++ D G G +
Sbjct: 1125 GTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVA 1184
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P V+ G S T+ +W + + H G V ++AF P+G +A+ + IK
Sbjct: 1185 FSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIK 1244
Query: 128 IWDLRKYEVLQTL 140
IWD QTL
Sbjct: 1245 IWDTASGTCTQTL 1257
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 13/195 (6%)
Query: 9 GTELHCLKEHG-AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
GT L+ HG +V + F + +AS + ++ D G G +
Sbjct: 999 GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVV 1058
Query: 68 VNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIK 127
+P V+ G T+ +W + + H V ++AF P+G +A+ + IK
Sbjct: 1059 FSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIK 1118
Query: 128 IWDLRKYEVLQTLPGH---AKTLDFSQKGLLAVGTGSF---VQILGDFSGSHNYSRYMGH 181
IWD QTL GH ++ FS G V +GS ++I SG+ + GH
Sbjct: 1119 IWDAASGTCTQTLEGHGGWVHSVAFSPDG-QRVASGSIDGTIKIWDAASGTCTQT-LEGH 1176
Query: 182 SMVKGYQIGKVSFRP 196
G + V+F P
Sbjct: 1177 ----GGWVQSVAFSP 1187
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 87 WKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKT 146
W PT A + H+ P++ +AFHP L+A++ ++ +KIWD +TL GH +
Sbjct: 94 WLPTAPARYT-LTSHRAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTRE 152
Query: 147 ---LDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ--IGKVSFRPYEDVL 201
+DF KG S + I + + + Y G ++ +G++ + V F P +D++
Sbjct: 153 VWGVDFDSKGSFLATCSSDLSIKVWDTQQWDNAGYSGKTL-RGHEHTVSTVKFLPGDDLI 211
Query: 202 G 202
Sbjct: 212 A 212
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 17 EHGAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVN-PFNGVV 75
EH V ++FL L+AS ++ +R +V + R G D +R+ P
Sbjct: 196 EH-TVSTVKFLPGDDLIASASRDKTIRIWEVATTFCI---RMITGHEDWVRMTVPSTDGT 251
Query: 76 SLGH--SGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHP-------------------NG 114
LG S T +W PT+ ++ H V +AF P G
Sbjct: 252 LLGSCSSDNTARVWDPTSGVMKMEFRGHGHIVEVIAFAPLASYAAIRELAGLKAATKAPG 311
Query: 115 HLMATSGKECKIKIWDLRKYEVLQTLPGH 143
+AT ++ +KIWD+ + L+TL GH
Sbjct: 312 AYIATGSRDKTVKIWDVHSGQELRTLSGH 340
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
++ G TV +W + L + H + L FHP+G + ++ + I++W+L
Sbjct: 314 IATGSRDKTVKIWDVHSGQELRTLSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTG 373
Query: 135 EVLQTLPGHA 144
++ + H+
Sbjct: 374 RCMKVVEAHS 383
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 62 RTDVMRV--NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMAT 119
R + RV +P +++ TV +W T + + H V + F G +AT
Sbjct: 108 RAPITRVAFHPTFSLLASASEDTTVKIWDWETGSFERTLKGHTREVWGVDFDSKGSFLAT 167
Query: 120 SGKECKIKIWDLRKYEVL----QTLPGHAKTL 147
+ IK+WD ++++ +TL GH T+
Sbjct: 168 CSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTV 199
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 22 LKLQFLRNHFLLASINKFGQLRYQDVTMGEI---VGNFRTGLGRTDVMRVNPFNGVVSLG 78
L L ++ L +S +++ + D+ G + V + +G T + +P + G
Sbjct: 312 LSLHATGDYLLSSSDDQY--WAFSDIQTGRVLTKVTDETSGCSLT-CAQFHPDGLIFGTG 368
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +W + H GP++++AF NG+ +AT+ + +K+WDLRK + +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 139 TLP----GHAKTLDFSQKG-LLAVGTGSFVQI 165
TL K+L F Q G LA+G G+ VQI
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G + V ++ ++ L + H V+++ FHP+ L+ ++ + I+IW + +
Sbjct: 240 GGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCV 299
Query: 138 QTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
Q + H + TG + GD+ S + +Y S + Q G+V +
Sbjct: 300 QVVRAHESAV-----------TGLSLHATGDYLLSSSDDQYWAFSDI---QTGRVLTKVT 345
Query: 198 EDVLG 202
++ G
Sbjct: 346 DETSG 350
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 22 LKLQFLRNHFLLASINKFGQLRYQDVTMGEI---VGNFRTGLGRTDVMRVNPFNGVVSLG 78
L L ++ L +S +++ + D+ G + V + +G T + +P + G
Sbjct: 312 LSLHATGDYLLSSSDDQY--WAFSDIQTGRVLTKVTDETSGCSLT-CAQFHPDGLIFGTG 368
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +W + H GP++++AF NG+ +AT+ + +K+WDLRK + +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 139 TLP----GHAKTLDFSQKG-LLAVGTGSFVQI 165
TL K+L F Q G LA+G G+ VQI
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G + V ++ ++ L + H V+++ FHP+ L+ ++ + I+IW + +
Sbjct: 240 GGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCV 299
Query: 138 QTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
Q + H + TG + GD+ S + +Y S + Q G+V +
Sbjct: 300 QVVRAHESAV-----------TGLSLHATGDYLLSSSDDQYWAFSDI---QTGRVLTKVT 345
Query: 198 EDVLG 202
++ G
Sbjct: 346 DETSG 350
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2
SV=2
Length = 504
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 22 LKLQFLRNHFLLASINKFGQLRYQDVTMGEI---VGNFRTGLGRTDVMRVNPFNGVVSLG 78
L L ++ L +S +++ + D+ G + V + +G T + +P + G
Sbjct: 312 LSLHATGDYLLSSSDDQY--WAFSDIQTGRVLTKVTDETSGCSLT-CAQFHPDGLIFGTG 368
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +W + H GP++++AF NG+ +AT+ + +K+WDLRK + +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 139 TLP----GHAKTLDFSQKG-LLAVGTGSFVQI 165
TL K+L F Q G LA+G G+ VQI
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G + V ++ +T L + H V+++ FHP+ L+ ++ + I+IW + +
Sbjct: 240 GGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCV 299
Query: 138 QTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
Q + H + TG + GD+ S + +Y S + Q G+V +
Sbjct: 300 QVVRAHESAV-----------TGLSLHATGDYLLSSSDDQYWAFSDI---QTGRVLTKVT 345
Query: 198 EDVLG 202
++ G
Sbjct: 346 DETSG 350
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1
Length = 504
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 22 LKLQFLRNHFLLASINKFGQLRYQDVTMGEI---VGNFRTGLGRTDVMRVNPFNGVVSLG 78
L L ++ L +S +++ + D+ G + V + +G T + +P + G
Sbjct: 312 LSLHATGDYLLSSSDDQY--WAFSDIQTGRVLTKVTDETSGCSLT-CAQFHPDGLIFGTG 368
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +W + H GP++++AF NG+ +AT+ + +K+WDLRK + +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 139 TLP----GHAKTLDFSQKG-LLAVGTGSFVQI 165
TL K+L F Q G LA+G G+ VQI
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALG-GTDVQI 459
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 78 GHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVL 137
G + V ++ +T L + H V+++ FHP+ L+ ++ + I+IW + +
Sbjct: 240 GGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCV 299
Query: 138 QTLPGHAKTLDFSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
Q + H + TG + GD+ S + +Y S + Q G+V +
Sbjct: 300 QVVRAHESAV-----------TGLSLHATGDYLLSSSDDQYWAFSDI---QTGRVLTKVT 345
Query: 198 EDVLG 202
++ G
Sbjct: 346 DETSG 350
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 32 LLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTT 91
L+AS + +R D+T + F G ++ + N V+ + TV +W
Sbjct: 158 LIASCSDDKTVRIWDLTNRLCINTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVWDIRM 217
Query: 92 AAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLD 148
L H VS+L+FHP+G+ + T+ + +KI DL + ++ TL GH ++
Sbjct: 218 NKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHGHQGPVLSVT 277
Query: 149 FSQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQ 188
FS+ G + Q+L N+ +Y +VK Q
Sbjct: 278 FSKSGDQFASGATDAQVL---VWKTNFDKYSVKEIVKLQQ 314
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 14/201 (6%)
Query: 20 AVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNG---VVS 76
AV +QF + L+AS +K +R + I G T V+R F+
Sbjct: 62 AVTCVQFSPSGHLVASSSKDRTVR---LWAPNIKGESTVLKAHTAVVRCVNFSSDGQTFI 118
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEV 136
++ W L + H V F P+G L+A+ + ++IWDL
Sbjct: 119 TASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDLTNRLC 178
Query: 137 LQTL---PGHAKTLDFSQKGLLAVGTGSFVQI-LGDFSGSHNYSRYMGHSMVKGYQIGKV 192
+ T GH+ +DF+Q G G+ + + D ++ + H V + +
Sbjct: 179 INTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVWDI----RMNKLLQHYQVHNAGVSSL 234
Query: 193 SFRPYEDVLGIGHSMGWSSIL 213
SF P + L S G IL
Sbjct: 235 SFHPSGNYLLTASSDGTLKIL 255
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 20/200 (10%)
Query: 67 RVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKI 126
R +P +++ TV +W T + + ++G + + F+ G +A++G + +
Sbjct: 151 RFSPDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKGHSNYVDFNQMGTCVASAGADSTV 210
Query: 127 KIWDLRKYEVLQTLPGH---AKTLDFSQKG--LLAVGTGSFVQILGDFSGSHNYSRYMGH 181
K+WD+R ++LQ H +L F G LL + ++IL G Y+
Sbjct: 211 KVWDIRMNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYT----- 265
Query: 182 SMVKGYQ--IGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRRE- 238
+ G+Q + V+F D G + +LV + NFD + +Q+R
Sbjct: 266 --LHGHQGPVLSVTFSKSGDQFASGATDA--QVLV---WKTNFDKYSVKEIVKLQQKRTC 318
Query: 239 KEVRSLLDKLPPETIMLNPS 258
E L+ + P T L+ S
Sbjct: 319 PEAPPHLNDIYPRTPHLHSS 338
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 80 SGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLR---KYEV 136
+ V +W + K H+ V+ + F P+GHL+A+S K+ +++W + V
Sbjct: 38 ADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPSGHLVASSSKDRTVRLWAPNIKGESTV 97
Query: 137 LQTLPGHAKTLDFSQKG 153
L+ + ++FS G
Sbjct: 98 LKAHTAVVRCVNFSSDG 114
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 82 GTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLP 141
G V +W + L ++ H+GPV + F P+G L+A+S + I++WD+ + + L L
Sbjct: 48 GCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLK 107
Query: 142 GHAK---TLDFS-QKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPY 197
GH + T+ FS LA G I+ + +GH I F P
Sbjct: 108 GHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHC----DSIQSSDFSPT 163
Query: 198 EDVLGIG 204
D L G
Sbjct: 164 SDSLATG 170
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 72 NGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDL 131
+G+++ G T+ +WKPTT +++ H V++LAF P+ +A++G +K+WD
Sbjct: 208 SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDC 267
Query: 132 RKYEVLQTLPG 142
+ L+TL G
Sbjct: 268 LTGKCLETLKG 278
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 19 GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLG 78
G V F + L+AS + +R DV + + + + + +P + ++ G
Sbjct: 69 GPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASG 128
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLR------ 132
+W+ + + ++ H + + F P +AT + + IWDLR
Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
Query: 133 KYEVLQTLPGHAKTLDFSQKGLLAVGT 159
Y L+ G+ L +S GLLA G+
Sbjct: 189 SYHNLEGHTGNISCLCYSASGLLASGS 215
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 101 HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH---AKTLDFSQKGLLAV 157
H G V+ AF P+G + T+ + + +W + +L L GH K+ FS G L
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 158 GTGSFVQI-LGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGW 209
+ S I L D + S GH + VSF P L G GW
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQR----SVETVSFSPDSKQLASG---GW 130
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 65 VMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKEC 124
++ +P +++ G + TV +W T A + + H VS +A++PNG +AT+ +
Sbjct: 45 AVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDH 104
Query: 125 KIKIWDLRKYEVLQTLPGHAK---TLDFSQKGLLAVGTGSFVQIL 166
+K+WD L+TL GH +F + +GSF + L
Sbjct: 105 SLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETL 149
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 9 GTELHCLKEHGA-VLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMR 67
G ++ L H V + + N LA+ L+ D G + RT G T+ +
Sbjct: 72 GARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACL---RTLTGHTNYVF 128
Query: 68 VNPFNG----VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKE 123
F+G +++ G T+ +W + L ++ H PV++ AF +G ++ TS +
Sbjct: 129 CCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLD 188
Query: 124 CKIKIWDLRKYEVLQTL 140
I++WD + L+TL
Sbjct: 189 GLIRLWDTQTGHCLKTL 205
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 90 TTAAPLIKMLC------HQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGH 143
+T P + C H V+A+ F P+G L+A+ + + +WD + TL GH
Sbjct: 22 STPNPTVAFRCTHALSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGH 81
Query: 144 A 144
+
Sbjct: 82 S 82
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 75 VSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKY 134
V G G++ +W A L ++ H+ +S+L FHP G +A+ + IK+WD+R+
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRK 137
Query: 135 EVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIG 190
+ GH + L FS G LA + L D + + H+ +
Sbjct: 138 GCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA----VN 193
Query: 191 KVSFRPYEDVLGIGHS 206
V F P E +L G +
Sbjct: 194 VVQFHPNEYLLASGSA 209
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 77 LGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAF-HPNGHLMATSGKECKIKIWDLRKYE 135
+ + T+T WK L +++ H VS+L +G L+AT G++C++ IW + K
Sbjct: 1 MALTNTTITSWK------LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPN 54
Query: 136 VLQTLPGHAKTLDF----SQKGLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGK 191
+ +L GH + S + + G+ S L D + MGH I
Sbjct: 55 CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKA----SISS 110
Query: 192 VSFRPYEDVLGIG 204
+ F P + L G
Sbjct: 111 LDFHPMGEYLASG 123
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Query: 33 LASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTA 92
LAS + ++ DV V ++ + +P ++ TV +W
Sbjct: 120 LASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAG 179
Query: 93 APLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPGHAKTLDFSQK 152
+ + H V+ + FHPN +L+A+ + +K+WDL K+ ++ + G + +
Sbjct: 180 KMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVV----R 235
Query: 153 GLLAVGTGSFVQILGDFSGSHNYSRYMGHSMVKGYQIGKVSFRPYEDV 200
+L GS + +SGS N R G + + + V + D+
Sbjct: 236 SVLFNPDGSCL-----YSGSENTLRVYGWEPDRCFDVVHVGWGKVSDL 278
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 19 GAVLKLQFLRNHFLLASINKFGQLRYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLG 78
AV +QF + + + + G LR D+ +I+ + +P ++ G
Sbjct: 64 SAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASG 123
Query: 79 HSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQ 138
+ +W + + H V LAF P+G +A++ + +K+WDL +++
Sbjct: 124 SVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 139 TLPGHAKTLDFSQ----KGLLAVGTGSFVQILGDF 169
H ++ Q + LLA G+ L D
Sbjct: 184 EFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+++ G V +W + ++ + H V + F+ + + +++WDL
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 134 YEVLQTLPGH---AKTLDFSQKG-LLAVGTGSFVQILGDFSGSHNYSRYMGHS 182
++L+TL GH +LDF G LA G+ L D RY GH+
Sbjct: 95 AKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHT 147
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 66 MRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECK 125
+ P +VS G + +W + ++ + H + A+A+ PNG+ +ATS +
Sbjct: 313 IACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDT 372
Query: 126 IKIWDLRKYEVLQTLPGHAKTLDFSQKGLLAVGTGSFVQILG 167
+KIWDLRK + T+P H+ + S + G F+ G
Sbjct: 373 VKIWDLRKVSLAHTIPAHSSLV--SDVRYIESGVNRFIATSG 412
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 74 VVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
++ G + TV +WK + + PL+++ H V +AFHP+G + ++ + ++WD+
Sbjct: 237 TLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT 296
Query: 134 YEVLQTLPGHAKTL 147
L GH++ +
Sbjct: 297 GVELLMQEGHSEGI 310
Score = 38.5 bits (88), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 83 TVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKIWDLRKYEVLQTLPG 142
T +W T L+ H + ++A P+G L+++ G + +IWDLR + + L
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE 347
Query: 143 HAKTL 147
H + +
Sbjct: 348 HIRQI 352
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 56 FRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGH 115
F L D + +P V G S T MW +T + L H PV ++A P+G
Sbjct: 605 FAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGR 664
Query: 116 LMATSGKECKIKIWDLRKYEVLQTLPGHAK----TLDFSQKGLLAVGTGS 161
++T ++ I +WD+ + L+ + GH K +L +S++G + + G+
Sbjct: 665 WLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGA 714
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Query: 69 NPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCHQGPVSALAFHPNGHLMATSGKECKIKI 128
+P N + G TV +W T L+ H PV ++F P GH AT+ + ++
Sbjct: 534 SPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARL 593
Query: 129 WDLRKYEVLQTLPGHAKTLD---FSQKGLLA-VGTGSFVQILGDFSGSHNYSRYMGHS 182
W L+ GH +D F G G+ + D S + ++GH+
Sbjct: 594 WSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHT 651
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 43 RYQDVTMGEIVGNFRTGLGRTDVMRVNPFNGVVSLGHSGGTVTMWKPTTAAPLIKMLCH- 101
R DV+ G+ V F + V P +S G G + +W T L +M H
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHG 693
Query: 102 QGPVSALAFHPNGHLMATSGKECKIKIWDLRK 133
+ + +L++ G+++ + G + +++WDL+K
Sbjct: 694 KNAIYSLSYSKEGNVLISGGADHTVRVWDLKK 725
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,711,326
Number of Sequences: 539616
Number of extensions: 6102983
Number of successful extensions: 26331
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 493
Number of HSP's that attempted gapping in prelim test: 22386
Number of HSP's gapped (non-prelim): 3929
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)